BLASTX nr result

ID: Cornus23_contig00021963 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00021963
         (379 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008437516.1| PREDICTED: 28S ribosomal protein S9, mitocho...    70   6e-10
ref|XP_010277025.1| PREDICTED: 37S ribosomal protein S9, mitocho...    69   2e-09
ref|XP_004145895.1| PREDICTED: 28S ribosomal protein S9, mitocho...    67   4e-09

>ref|XP_008437516.1| PREDICTED: 28S ribosomal protein S9, mitochondrial [Cucumis melo]
          Length = 405

 Score = 70.1 bits (170), Expect = 6e-10
 Identities = 42/126 (33%), Positives = 66/126 (52%), Gaps = 3/126 (2%)
 Frame = -3

Query: 371 LIYSPYHLSIPKSHSLHTLHPPLGKPNFNI---FFETXXXXXXXXXXXXXXSKDQPTSTS 201
           L+  P H+ +    +L +  PP   P+F++   FF T               +DQPTS  
Sbjct: 5   LLPKPSHIRLL---ALISTKPPAQTPSFHLLPRFFSTNNNGSNNNNNSGS--RDQPTS-- 57

Query: 200 DLWKLSTENDESIDSLFGDDTGNLEGIADGEATRPNDESWLKDSREGGGNEADILKAVDK 21
           ++WK+S ENDE+ D LF  +  NL+GIA+ ++   ND+SW+         E DI  +++K
Sbjct: 58  NIWKISQENDENFDKLFTQEADNLDGIAEEDSAPRNDDSWVTSKSGDRDAEGDIFASLEK 117

Query: 20  EIGGEK 3
           E+ G K
Sbjct: 118 EVQGNK 123


>ref|XP_010277025.1| PREDICTED: 37S ribosomal protein S9, mitochondrial [Nelumbo
           nucifera] gi|720068187|ref|XP_010277026.1| PREDICTED:
           37S ribosomal protein S9, mitochondrial [Nelumbo
           nucifera]
          Length = 415

 Score = 68.6 bits (166), Expect = 2e-09
 Identities = 49/139 (35%), Positives = 65/139 (46%), Gaps = 14/139 (10%)
 Frame = -3

Query: 377 LTLIYSPYHLSIPKSHSLHTLHPPLGKPNFNIFFETXXXXXXXXXXXXXXS-KDQPTSTS 201
           L  + S  +  +P   S H+  PP   PN+N   E+              + KD  TSTS
Sbjct: 14  LLSLASSRNFCLPSQPSNHSHLPPFN-PNYNFILESFRCFSSNRKDNGGGATKDSSTSTS 72

Query: 200 DLWKLSTENDESIDSLFGDDTGNLEGIADGEA-------------TRPNDESWLKDSREG 60
             W+ S +N    DSLF D  G+L GI+DG+A             ++ NDESW KDS E 
Sbjct: 73  --WRFSPDNHNDEDSLFRDGEGSLAGISDGDAYCGVGSEKTTTVESQGNDESWSKDSTEK 130

Query: 59  GGNEADILKAVDKEIGGEK 3
           G    DI   +DKE G +K
Sbjct: 131 G----DIFSEIDKEFGSKK 145


>ref|XP_004145895.1| PREDICTED: 28S ribosomal protein S9, mitochondrial [Cucumis
           sativus] gi|700194755|gb|KGN49932.1| Ribosomal protein
           S9 [Cucumis sativus]
          Length = 405

 Score = 67.4 bits (163), Expect = 4e-09
 Identities = 41/126 (32%), Positives = 64/126 (50%), Gaps = 3/126 (2%)
 Frame = -3

Query: 371 LIYSPYHLSIPKSHSLHTLHPPLGKPNFNI---FFETXXXXXXXXXXXXXXSKDQPTSTS 201
           L+  P H+ +    +L +  PP   P+F +   FF T               KDQPTS  
Sbjct: 5   LLPKPSHVRLL---ALISTKPPAQTPSFQLLPRFFSTNNNGSNNNNNSGS--KDQPTS-- 57

Query: 200 DLWKLSTENDESIDSLFGDDTGNLEGIADGEATRPNDESWLKDSREGGGNEADILKAVDK 21
           ++WK+S ENDE+ D LF  +  NL+GIA+ ++    D+SW+         E D+  +++K
Sbjct: 58  NIWKISQENDENFDQLFTQEADNLDGIAEEDSAPRKDDSWVTSKSGDQDAEGDLFASLEK 117

Query: 20  EIGGEK 3
           E+ G K
Sbjct: 118 EVQGNK 123


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