BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00021890
         (357 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_012476049.1| PREDICTED: DNA-directed RNA polymerase IV su...   155   1e-35
ref|XP_012476048.1| PREDICTED: DNA-directed RNA polymerase IV su...   155   1e-35
ref|XP_012087018.1| PREDICTED: DNA-directed RNA polymerase IV su...   155   1e-35
gb|KJB25756.1| hypothetical protein B456_004G207300 [Gossypium r...   155   1e-35
ref|XP_012476045.1| PREDICTED: DNA-directed RNA polymerase IV su...   155   1e-35
ref|XP_007040111.1| DNA-directed RNA polymerase II subunit RPB1-...   154   2e-35
ref|XP_011650451.1| PREDICTED: DNA-directed RNA polymerase IV su...   153   5e-35
ref|XP_011650450.1| PREDICTED: DNA-directed RNA polymerase IV su...   153   5e-35
ref|XP_011650447.1| PREDICTED: DNA-directed RNA polymerase IV su...   153   5e-35
ref|XP_008448971.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   153   5e-35
ref|XP_010661376.1| PREDICTED: DNA-directed RNA polymerase IV su...   150   5e-34
ref|XP_010661369.1| PREDICTED: DNA-directed RNA polymerase IV su...   150   5e-34
ref|XP_010661365.1| PREDICTED: DNA-directed RNA polymerase IV su...   150   5e-34
emb|CBI34757.3| unnamed protein product [Vitis vinifera]              150   5e-34
emb|CAN66198.1| hypothetical protein VITISV_011232 [Vitis vinifera]   150   5e-34
ref|XP_002509696.1| DNA-directed RNA polymerase, putative [Ricin...   147   2e-33
ref|XP_011014513.1| PREDICTED: DNA-directed RNA polymerase IV su...   142   7e-32
ref|XP_012488706.1| PREDICTED: DNA-directed RNA polymerase IV su...   141   2e-31
gb|KJB39621.1| hypothetical protein B456_007G022200 [Gossypium r...   141   2e-31
ref|XP_008238796.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   141   2e-31

>ref|XP_012476049.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X3
           [Gossypium raimondii]
          Length = 1300

 Score =  155 bits (392), Expect = 1e-35
 Identities = 78/124 (62%), Positives = 95/124 (76%), Gaps = 6/124 (4%)
 Frame = -2

Query: 356 FGKTAIIAEVSEKLLKKVRSRGYREVLASDYWDFIPKDAQQDESFLKPNKRVLSHAQVYH 177
           F K+AI+ EVSE  L KVR RG R+ L +DYWDFIPKD QQ+E F+KP +RVLSHAQV H
Sbjct: 152 FRKSAIMVEVSENSLMKVRKRG-RQALPADYWDFIPKDQQQEEGFVKPGRRVLSHAQVRH 210

Query: 176 MLRDVDLRFLKEFVLATNSLFLSSFPVTPNCHRVTEF------AQHMIFDERTRAYKKLV 15
           +L+DV+  F+K+F+   +S+FL+ FPVTPN HRVTE       AQ +IFDERTR YKKLV
Sbjct: 211 LLKDVNPEFIKKFISEADSIFLNFFPVTPNSHRVTEIMHTSSNAQRLIFDERTRVYKKLV 270

Query: 14  DFRG 3
           DFRG
Sbjct: 271 DFRG 274


>ref|XP_012476048.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X2
           [Gossypium raimondii]
          Length = 1340

 Score =  155 bits (392), Expect = 1e-35
 Identities = 78/124 (62%), Positives = 95/124 (76%), Gaps = 6/124 (4%)
 Frame = -2

Query: 356 FGKTAIIAEVSEKLLKKVRSRGYREVLASDYWDFIPKDAQQDESFLKPNKRVLSHAQVYH 177
           F K+AI+ EVSE  L KVR RG R+ L +DYWDFIPKD QQ+E F+KP +RVLSHAQV H
Sbjct: 11  FRKSAIMVEVSENSLMKVRKRG-RQALPADYWDFIPKDQQQEEGFVKPGRRVLSHAQVRH 69

Query: 176 MLRDVDLRFLKEFVLATNSLFLSSFPVTPNCHRVTEF------AQHMIFDERTRAYKKLV 15
           +L+DV+  F+K+F+   +S+FL+ FPVTPN HRVTE       AQ +IFDERTR YKKLV
Sbjct: 70  LLKDVNPEFIKKFISEADSIFLNFFPVTPNSHRVTEIMHTSSNAQRLIFDERTRVYKKLV 129

Query: 14  DFRG 3
           DFRG
Sbjct: 130 DFRG 133


>ref|XP_012087018.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 [Jatropha
           curcas]
          Length = 1453

 Score =  155 bits (392), Expect = 1e-35
 Identities = 75/124 (60%), Positives = 96/124 (77%), Gaps = 6/124 (4%)
 Frame = -2

Query: 356 FGKTAIIAEVSEKLLKKVRSRGYREVLASDYWDFIPKDAQQDESFLKPNKRVLSHAQVYH 177
           F K  IIA++SE+  +    RG ++ LA+DYWD IPKD QQ+E+ L+PN+RVL+HAQV H
Sbjct: 147 FRKNVIIAKISERPPQNSHKRGRKKRLAADYWDIIPKDEQQEENTLRPNQRVLTHAQVRH 206

Query: 176 MLRDVDLRFLKEFVLATNSLFLSSFPVTPNCHRVTEF------AQHMIFDERTRAYKKLV 15
           +L+DVD  F+K+FVL T+S+FL+ FPVTPNCHRVTE        Q ++FDERTRAYKKLV
Sbjct: 207 LLKDVDPNFIKKFVLKTDSIFLNCFPVTPNCHRVTEVTHAFSNGQRLVFDERTRAYKKLV 266

Query: 14  DFRG 3
           DFRG
Sbjct: 267 DFRG 270


>gb|KJB25756.1| hypothetical protein B456_004G207300 [Gossypium raimondii]
          Length = 1478

 Score =  155 bits (392), Expect = 1e-35
 Identities = 78/124 (62%), Positives = 95/124 (76%), Gaps = 6/124 (4%)
 Frame = -2

Query: 356 FGKTAIIAEVSEKLLKKVRSRGYREVLASDYWDFIPKDAQQDESFLKPNKRVLSHAQVYH 177
           F K+AI+ EVSE  L KVR RG R+ L +DYWDFIPKD QQ+E F+KP +RVLSHAQV H
Sbjct: 149 FRKSAIMVEVSENSLMKVRKRG-RQALPADYWDFIPKDQQQEEGFVKPGRRVLSHAQVRH 207

Query: 176 MLRDVDLRFLKEFVLATNSLFLSSFPVTPNCHRVTEF------AQHMIFDERTRAYKKLV 15
           +L+DV+  F+K+F+   +S+FL+ FPVTPN HRVTE       AQ +IFDERTR YKKLV
Sbjct: 208 LLKDVNPEFIKKFISEADSIFLNFFPVTPNSHRVTEIMHTSSNAQRLIFDERTRVYKKLV 267

Query: 14  DFRG 3
           DFRG
Sbjct: 268 DFRG 271


>ref|XP_012476045.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X1
           [Gossypium raimondii] gi|823152441|ref|XP_012476046.1|
           PREDICTED: DNA-directed RNA polymerase IV subunit 1-like
           isoform X1 [Gossypium raimondii]
           gi|763758424|gb|KJB25755.1| hypothetical protein
           B456_004G207300 [Gossypium raimondii]
           gi|763758426|gb|KJB25757.1| hypothetical protein
           B456_004G207300 [Gossypium raimondii]
          Length = 1481

 Score =  155 bits (392), Expect = 1e-35
 Identities = 78/124 (62%), Positives = 95/124 (76%), Gaps = 6/124 (4%)
 Frame = -2

Query: 356 FGKTAIIAEVSEKLLKKVRSRGYREVLASDYWDFIPKDAQQDESFLKPNKRVLSHAQVYH 177
           F K+AI+ EVSE  L KVR RG R+ L +DYWDFIPKD QQ+E F+KP +RVLSHAQV H
Sbjct: 152 FRKSAIMVEVSENSLMKVRKRG-RQALPADYWDFIPKDQQQEEGFVKPGRRVLSHAQVRH 210

Query: 176 MLRDVDLRFLKEFVLATNSLFLSSFPVTPNCHRVTEF------AQHMIFDERTRAYKKLV 15
           +L+DV+  F+K+F+   +S+FL+ FPVTPN HRVTE       AQ +IFDERTR YKKLV
Sbjct: 211 LLKDVNPEFIKKFISEADSIFLNFFPVTPNSHRVTEIMHTSSNAQRLIFDERTRVYKKLV 270

Query: 14  DFRG 3
           DFRG
Sbjct: 271 DFRG 274


>ref|XP_007040111.1| DNA-directed RNA polymerase II subunit RPB1-B, putative [Theobroma
           cacao] gi|508777356|gb|EOY24612.1| DNA-directed RNA
           polymerase II subunit RPB1-B, putative [Theobroma cacao]
          Length = 1484

 Score =  154 bits (390), Expect = 2e-35
 Identities = 77/124 (62%), Positives = 96/124 (77%), Gaps = 6/124 (4%)
 Frame = -2

Query: 356 FGKTAIIAEVSEKLLKKVRSRGYREVLASDYWDFIPKDAQQDESFLKPNKRVLSHAQVYH 177
           F K+AII EVSEK   KVR RG ++ L SDYWDFIPKD QQ+ES ++PN+RVLSH+QV +
Sbjct: 152 FRKSAIIVEVSEKSSMKVRKRG-KQALPSDYWDFIPKDEQQEESLIRPNRRVLSHSQVRY 210

Query: 176 MLRDVDLRFLKEFVLATNSLFLSSFPVTPNCHRVTEF------AQHMIFDERTRAYKKLV 15
           +L+DVD  F+K+FVL+ +S+FL+ FPVTPN HRVTE        Q +IFD+RTR YKKL 
Sbjct: 211 LLKDVDPEFIKKFVLSMDSIFLNCFPVTPNSHRVTEIMHASSNGQRLIFDQRTRVYKKLA 270

Query: 14  DFRG 3
           DFRG
Sbjct: 271 DFRG 274


>ref|XP_011650451.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X3
           [Cucumis sativus]
          Length = 1361

 Score =  153 bits (386), Expect = 5e-35
 Identities = 74/124 (59%), Positives = 97/124 (78%), Gaps = 6/124 (4%)
 Frame = -2

Query: 356 FGKTAIIAEVSEKLLKKVRSRGYREVLASDYWDFIPKDAQQDESFLKPNKRVLSHAQVYH 177
           F K+ I+ EV E + KK + R  +  L SDYWDFIPKD QQ+ES+ +PN+++L+HAQV++
Sbjct: 43  FKKSMIMVEVKENMSKKYQKRVAKGGLPSDYWDFIPKDEQQEESYCRPNRKILTHAQVHY 102

Query: 176 MLRDVDLRFLKEFVLATNSLFLSSFPVTPNCHRVTEFA------QHMIFDERTRAYKKLV 15
           +L+D+D +FLK+FV A +SLFL+SFPVTPN HRVTE A      Q +IFDERTRAYKK+V
Sbjct: 103 LLKDIDPKFLKKFVPAIDSLFLNSFPVTPNSHRVTEMAHSFSNGQRLIFDERTRAYKKVV 162

Query: 14  DFRG 3
           DFRG
Sbjct: 163 DFRG 166


>ref|XP_011650450.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X2
           [Cucumis sativus]
          Length = 1362

 Score =  153 bits (386), Expect = 5e-35
 Identities = 74/124 (59%), Positives = 97/124 (78%), Gaps = 6/124 (4%)
 Frame = -2

Query: 356 FGKTAIIAEVSEKLLKKVRSRGYREVLASDYWDFIPKDAQQDESFLKPNKRVLSHAQVYH 177
           F K+ I+ EV E + KK + R  +  L SDYWDFIPKD QQ+ES+ +PN+++L+HAQV++
Sbjct: 44  FKKSMIMVEVKENMSKKYQKRVAKGGLPSDYWDFIPKDEQQEESYCRPNRKILTHAQVHY 103

Query: 176 MLRDVDLRFLKEFVLATNSLFLSSFPVTPNCHRVTEFA------QHMIFDERTRAYKKLV 15
           +L+D+D +FLK+FV A +SLFL+SFPVTPN HRVTE A      Q +IFDERTRAYKK+V
Sbjct: 104 LLKDIDPKFLKKFVPAIDSLFLNSFPVTPNSHRVTEMAHSFSNGQRLIFDERTRAYKKVV 163

Query: 14  DFRG 3
           DFRG
Sbjct: 164 DFRG 167


>ref|XP_011650447.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X1
           [Cucumis sativus] gi|778675671|ref|XP_011650448.1|
           PREDICTED: DNA-directed RNA polymerase IV subunit 1
           isoform X1 [Cucumis sativus]
           gi|778675673|ref|XP_011650449.1| PREDICTED: DNA-directed
           RNA polymerase IV subunit 1 isoform X1 [Cucumis sativus]
           gi|700200830|gb|KGN55963.1| hypothetical protein
           Csa_3G039340 [Cucumis sativus]
          Length = 1483

 Score =  153 bits (386), Expect = 5e-35
 Identities = 74/124 (59%), Positives = 97/124 (78%), Gaps = 6/124 (4%)
 Frame = -2

Query: 356 FGKTAIIAEVSEKLLKKVRSRGYREVLASDYWDFIPKDAQQDESFLKPNKRVLSHAQVYH 177
           F K+ I+ EV E + KK + R  +  L SDYWDFIPKD QQ+ES+ +PN+++L+HAQV++
Sbjct: 165 FKKSMIMVEVKENMSKKYQKRVAKGGLPSDYWDFIPKDEQQEESYCRPNRKILTHAQVHY 224

Query: 176 MLRDVDLRFLKEFVLATNSLFLSSFPVTPNCHRVTEFA------QHMIFDERTRAYKKLV 15
           +L+D+D +FLK+FV A +SLFL+SFPVTPN HRVTE A      Q +IFDERTRAYKK+V
Sbjct: 225 LLKDIDPKFLKKFVPAIDSLFLNSFPVTPNSHRVTEMAHSFSNGQRLIFDERTRAYKKVV 284

Query: 14  DFRG 3
           DFRG
Sbjct: 285 DFRG 288


>ref|XP_008448971.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase IV
           subunit 1 [Cucumis melo]
          Length = 1489

 Score =  153 bits (386), Expect = 5e-35
 Identities = 74/124 (59%), Positives = 97/124 (78%), Gaps = 6/124 (4%)
 Frame = -2

Query: 356 FGKTAIIAEVSEKLLKKVRSRGYREVLASDYWDFIPKDAQQDESFLKPNKRVLSHAQVYH 177
           F K+ I+ EV E + KK + R  +  L SDYWDFIPKD QQ+ES+ +PN+++L+HAQV++
Sbjct: 165 FKKSMIMVEVKENMSKKYQKRVAKGGLPSDYWDFIPKDEQQEESYCRPNRKILTHAQVHY 224

Query: 176 MLRDVDLRFLKEFVLATNSLFLSSFPVTPNCHRVTEFA------QHMIFDERTRAYKKLV 15
           +L+D+D +FLK+FV A +SLFL+SFPVTPN HRVTE A      Q +IFDERTRAYKK+V
Sbjct: 225 LLKDIDPKFLKKFVPAIDSLFLNSFPVTPNSHRVTEMAHSFSNGQRLIFDERTRAYKKVV 284

Query: 14  DFRG 3
           DFRG
Sbjct: 285 DFRG 288


>ref|XP_010661376.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X3
           [Vitis vinifera]
          Length = 1354

 Score =  150 bits (378), Expect = 5e-34
 Identities = 74/124 (59%), Positives = 94/124 (75%), Gaps = 6/124 (4%)
 Frame = -2

Query: 356 FGKTAIIAEVSEKLLKKVRSRGYREVLASDYWDFIPKDAQQDESFLKPNKRVLSHAQVYH 177
           F KTAII E++EKL KK++ + +R VL  DYWDFIPKD QQ+E+ L PN+RVLSHAQV++
Sbjct: 43  FRKTAIIVEMNEKLPKKLQKKSFRPVLPLDYWDFIPKDPQQEENCLNPNRRVLSHAQVHY 102

Query: 176 MLRDVDLRFLKEFVLATNSLFLSSFPVTPNCHRVTEF------AQHMIFDERTRAYKKLV 15
           +L+D+D  F+KEFV   +S FL+  PVTPN HRVTE        Q +IFD+ +RAYKKLV
Sbjct: 103 LLKDIDPGFIKEFVSRMDSFFLNCLPVTPNNHRVTEITHALSNGQTLIFDQHSRAYKKLV 162

Query: 14  DFRG 3
           DFRG
Sbjct: 163 DFRG 166


>ref|XP_010661369.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X2
           [Vitis vinifera]
          Length = 1458

 Score =  150 bits (378), Expect = 5e-34
 Identities = 74/124 (59%), Positives = 94/124 (75%), Gaps = 6/124 (4%)
 Frame = -2

Query: 356 FGKTAIIAEVSEKLLKKVRSRGYREVLASDYWDFIPKDAQQDESFLKPNKRVLSHAQVYH 177
           F KTAII E++EKL KK++ + +R VL  DYWDFIPKD QQ+E+ L PN+RVLSHAQV++
Sbjct: 149 FRKTAIIVEMNEKLPKKLQKKSFRPVLPLDYWDFIPKDPQQEENCLNPNRRVLSHAQVHY 208

Query: 176 MLRDVDLRFLKEFVLATNSLFLSSFPVTPNCHRVTEF------AQHMIFDERTRAYKKLV 15
           +L+D+D  F+KEFV   +S FL+  PVTPN HRVTE        Q +IFD+ +RAYKKLV
Sbjct: 209 LLKDIDPGFIKEFVSRMDSFFLNCLPVTPNNHRVTEITHALSNGQTLIFDQHSRAYKKLV 268

Query: 14  DFRG 3
           DFRG
Sbjct: 269 DFRG 272


>ref|XP_010661365.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X1
           [Vitis vinifera]
          Length = 1460

 Score =  150 bits (378), Expect = 5e-34
 Identities = 74/124 (59%), Positives = 94/124 (75%), Gaps = 6/124 (4%)
 Frame = -2

Query: 356 FGKTAIIAEVSEKLLKKVRSRGYREVLASDYWDFIPKDAQQDESFLKPNKRVLSHAQVYH 177
           F KTAII E++EKL KK++ + +R VL  DYWDFIPKD QQ+E+ L PN+RVLSHAQV++
Sbjct: 149 FRKTAIIVEMNEKLPKKLQKKSFRPVLPLDYWDFIPKDPQQEENCLNPNRRVLSHAQVHY 208

Query: 176 MLRDVDLRFLKEFVLATNSLFLSSFPVTPNCHRVTEF------AQHMIFDERTRAYKKLV 15
           +L+D+D  F+KEFV   +S FL+  PVTPN HRVTE        Q +IFD+ +RAYKKLV
Sbjct: 209 LLKDIDPGFIKEFVSRMDSFFLNCLPVTPNNHRVTEITHALSNGQTLIFDQHSRAYKKLV 268

Query: 14  DFRG 3
           DFRG
Sbjct: 269 DFRG 272


>emb|CBI34757.3| unnamed protein product [Vitis vinifera]
          Length = 1359

 Score =  150 bits (378), Expect = 5e-34
 Identities = 74/124 (59%), Positives = 94/124 (75%), Gaps = 6/124 (4%)
 Frame = -2

Query: 356 FGKTAIIAEVSEKLLKKVRSRGYREVLASDYWDFIPKDAQQDESFLKPNKRVLSHAQVYH 177
           F KTAII E++EKL KK++ + +R VL  DYWDFIPKD QQ+E+ L PN+RVLSHAQV++
Sbjct: 144 FRKTAIIVEMNEKLPKKLQKKSFRPVLPLDYWDFIPKDPQQEENCLNPNRRVLSHAQVHY 203

Query: 176 MLRDVDLRFLKEFVLATNSLFLSSFPVTPNCHRVTEF------AQHMIFDERTRAYKKLV 15
           +L+D+D  F+KEFV   +S FL+  PVTPN HRVTE        Q +IFD+ +RAYKKLV
Sbjct: 204 LLKDIDPGFIKEFVSRMDSFFLNCLPVTPNNHRVTEITHALSNGQTLIFDQHSRAYKKLV 263

Query: 14  DFRG 3
           DFRG
Sbjct: 264 DFRG 267


>emb|CAN66198.1| hypothetical protein VITISV_011232 [Vitis vinifera]
          Length = 1393

 Score =  150 bits (378), Expect = 5e-34
 Identities = 74/124 (59%), Positives = 94/124 (75%), Gaps = 6/124 (4%)
 Frame = -2

Query: 356 FGKTAIIAEVSEKLLKKVRSRGYREVLASDYWDFIPKDAQQDESFLKPNKRVLSHAQVYH 177
           F KTAII E++EKL KK++ + +R VL  DYWDFIPKD QQ+E+ L PN+RVLSHAQV++
Sbjct: 149 FRKTAIIVEMNEKLPKKLQKKSFRPVLPLDYWDFIPKDPQQEENCLNPNRRVLSHAQVHY 208

Query: 176 MLRDVDLRFLKEFVLATNSLFLSSFPVTPNCHRVTEF------AQHMIFDERTRAYKKLV 15
           +L+D+D  F+KEFV   +S FL+  PVTPN HRVTE        Q +IFD+ +RAYKKLV
Sbjct: 209 LLKDIDPGFIKEFVSRMDSFFLNCLPVTPNNHRVTEITHALSNGQTLIFDQHSRAYKKLV 268

Query: 14  DFRG 3
           DFRG
Sbjct: 269 DFRG 272


>ref|XP_002509696.1| DNA-directed RNA polymerase, putative [Ricinus communis]
           gi|223549595|gb|EEF51083.1| DNA-directed RNA polymerase,
           putative [Ricinus communis]
          Length = 1475

 Score =  147 bits (372), Expect = 2e-33
 Identities = 69/124 (55%), Positives = 93/124 (75%), Gaps = 6/124 (4%)
 Frame = -2

Query: 356 FGKTAIIAEVSEKLLKKVRSRGYREVLASDYWDFIPKDAQQDESFLKPNKRVLSHAQVYH 177
           F K  IIA+ SE+   K + RG+++ LA+DYWD IPKD QQ+E+  +PN+RVLSHAQV H
Sbjct: 144 FRKNVIIAKFSERPTNKSQKRGFKKKLAADYWDIIPKDEQQEENITRPNQRVLSHAQVIH 203

Query: 176 MLRDVDLRFLKEFVLATNSLFLSSFPVTPNCHRVTEF------AQHMIFDERTRAYKKLV 15
           +L ++D  F+++FVL  +S+FL+ F VTPNCHRVTE        Q ++FD+RTRAYKK+V
Sbjct: 204 LLENIDPNFIRKFVLKRDSIFLNCFSVTPNCHRVTEVTHAFSNGQRLVFDDRTRAYKKMV 263

Query: 14  DFRG 3
           DFRG
Sbjct: 264 DFRG 267


>ref|XP_011014513.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like [Populus
           euphratica] gi|743940107|ref|XP_011014514.1| PREDICTED:
           DNA-directed RNA polymerase IV subunit 1-like [Populus
           euphratica] gi|743940109|ref|XP_011014516.1| PREDICTED:
           DNA-directed RNA polymerase IV subunit 1-like [Populus
           euphratica] gi|743940111|ref|XP_011014517.1| PREDICTED:
           DNA-directed RNA polymerase IV subunit 1-like [Populus
           euphratica] gi|743940113|ref|XP_011014518.1| PREDICTED:
           DNA-directed RNA polymerase IV subunit 1-like [Populus
           euphratica] gi|743940115|ref|XP_011014519.1| PREDICTED:
           DNA-directed RNA polymerase IV subunit 1-like [Populus
           euphratica] gi|743940117|ref|XP_011014520.1| PREDICTED:
           DNA-directed RNA polymerase IV subunit 1-like [Populus
           euphratica] gi|743940119|ref|XP_011014522.1| PREDICTED:
           DNA-directed RNA polymerase IV subunit 1-like [Populus
           euphratica]
          Length = 1488

 Score =  142 bits (359), Expect = 7e-32
 Identities = 73/126 (57%), Positives = 94/126 (74%), Gaps = 8/126 (6%)
 Frame = -2

Query: 356 FGKTAIIAEVSEKLLKKVRSRGYREVLASDYWDFIPKDAQQDE--SFLKPNKRVLSHAQV 183
           F KTAIIAE+ E L  K + +G++++LA+DYWD  PKD Q++E  +  KPN+RVLSH+QV
Sbjct: 147 FRKTAIIAEIRETLSNKPQ-KGFKKILAADYWDIFPKDEQEEEEETNAKPNRRVLSHSQV 205

Query: 182 YHMLRDVDLRFLKEFVLATNSLFLSSFPVTPNCHRVTEF------AQHMIFDERTRAYKK 21
            HML+DVD   +K  +L TN++FL+ FPVTPN HRVTE        Q +IFDERTRAYKK
Sbjct: 206 RHMLKDVDPNLIKLSILKTNTIFLNCFPVTPNSHRVTEVTHAFSNGQRLIFDERTRAYKK 265

Query: 20  LVDFRG 3
           +VDFRG
Sbjct: 266 MVDFRG 271


>ref|XP_012488706.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like [Gossypium
           raimondii]
          Length = 1485

 Score =  141 bits (355), Expect = 2e-31
 Identities = 71/123 (57%), Positives = 92/123 (74%), Gaps = 7/123 (5%)
 Frame = -2

Query: 350 KTAIIAEVSEKLLKKVRSRGYREVLASDYWDFIPKDAQQDES-FLKPNKRVLSHAQVYHM 174
           K+ I+ EVSE  L  VR RG R+ L +DYWDFIPKD Q++E   +KP +RVLSHAQV+++
Sbjct: 159 KSTIVVEVSEDSLMMVRKRG-RQALPADYWDFIPKDQQEEEDGLMKPRRRVLSHAQVHYL 217

Query: 173 LRDVDLRFLKEFVLATNSLFLSSFPVTPNCHRVTEF------AQHMIFDERTRAYKKLVD 12
           L+DVD  F+K+F+   +S+FL+ FPVTPN HRVTE       +Q +IFDERTR YK+LVD
Sbjct: 218 LKDVDPEFIKKFIQNVDSIFLNCFPVTPNSHRVTEITHRSSNSQRLIFDERTRLYKRLVD 277

Query: 11  FRG 3
           FRG
Sbjct: 278 FRG 280


>gb|KJB39621.1| hypothetical protein B456_007G022200 [Gossypium raimondii]
          Length = 1397

 Score =  141 bits (355), Expect = 2e-31
 Identities = 71/123 (57%), Positives = 92/123 (74%), Gaps = 7/123 (5%)
 Frame = -2

Query: 350 KTAIIAEVSEKLLKKVRSRGYREVLASDYWDFIPKDAQQDES-FLKPNKRVLSHAQVYHM 174
           K+ I+ EVSE  L  VR RG R+ L +DYWDFIPKD Q++E   +KP +RVLSHAQV+++
Sbjct: 59  KSTIVVEVSEDSLMMVRKRG-RQALPADYWDFIPKDQQEEEDGLMKPRRRVLSHAQVHYL 117

Query: 173 LRDVDLRFLKEFVLATNSLFLSSFPVTPNCHRVTEF------AQHMIFDERTRAYKKLVD 12
           L+DVD  F+K+F+   +S+FL+ FPVTPN HRVTE       +Q +IFDERTR YK+LVD
Sbjct: 118 LKDVDPEFIKKFIQNVDSIFLNCFPVTPNSHRVTEITHRSSNSQRLIFDERTRLYKRLVD 177

Query: 11  FRG 3
           FRG
Sbjct: 178 FRG 180


>ref|XP_008238796.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase IV
           subunit 1 [Prunus mume]
          Length = 1452

 Score =  141 bits (355), Expect = 2e-31
 Identities = 72/124 (58%), Positives = 91/124 (73%), Gaps = 6/124 (4%)
 Frame = -2

Query: 356 FGKTAIIAEVSEKLLKKVRSRGYREVLASDYWDFIPKDAQQDESFLKPNKRVLSHAQVYH 177
           F ++AIIAE +              +L +DYWDFIPKDAQQDES +KPNKRVLSHAQV++
Sbjct: 146 FKRSAIIAEANG-------------ILPADYWDFIPKDAQQDESCMKPNKRVLSHAQVHY 192

Query: 176 MLRDVDLRFLKEFVLATNSLFLSSFPVTPNCHRVTEF------AQHMIFDERTRAYKKLV 15
           +L+DVD +F+++ V  TNSLF+ SF VTPNCHRVTE        Q ++FDERTRAY+KLV
Sbjct: 193 LLKDVDPKFIEKIVPKTNSLFMGSFLVTPNCHRVTEVMHSFSNGQRLMFDERTRAYRKLV 252

Query: 14  DFRG 3
           DF+G
Sbjct: 253 DFKG 256