BLASTX nr result
ID: Cornus23_contig00021455
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cornus23_contig00021455
(288 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006417799.1| hypothetical protein EUTSA_v10007947mg [Eutr... 74 6e-11
ref|XP_006417801.1| hypothetical protein EUTSA_v10007946mg [Eutr... 74 6e-11
gb|AAF79551.1|AC022464_9 F22G5.14 [Arabidopsis thaliana] 72 2e-10
gb|AAF79573.1|AC022464_31 F22G5.18 [Arabidopsis thaliana] 72 2e-10
ref|XP_002892402.1| transcription factor IIA large subunit [Arab... 72 2e-10
ref|XP_002889649.1| hypothetical protein ARALYDRAFT_470771 [Arab... 72 2e-10
emb|CAA67368.1| TFIIA [Arabidopsis thaliana] 72 2e-10
ref|NP_850937.1| transcription factor IIA, alpha/beta subunit [A... 72 2e-10
ref|NP_563790.1| transcription factor IIA, alpha/beta subunit [A... 72 2e-10
ref|XP_011080825.1| PREDICTED: transcription initiation factor I... 72 2e-10
ref|XP_010521880.1| PREDICTED: transcription initiation factor I... 72 2e-10
ref|XP_012066966.1| PREDICTED: transcription initiation factor I... 72 2e-10
gb|ABW81076.1| TF1 [Cleome spinosa] 72 2e-10
ref|XP_010535450.1| PREDICTED: transcription initiation factor I... 71 4e-10
ref|XP_007016334.1| Transcription initiation factor IIA subunit ... 71 4e-10
ref|XP_009110942.1| PREDICTED: transcription initiation factor I... 70 5e-10
ref|XP_013599856.1| PREDICTED: transcription initiation factor I... 70 5e-10
ref|XP_013657500.1| PREDICTED: transcription initiation factor I... 70 5e-10
ref|XP_013600458.1| PREDICTED: transcription initiation factor I... 70 6e-10
ref|XP_009118437.1| PREDICTED: transcription initiation factor I... 70 6e-10
>ref|XP_006417799.1| hypothetical protein EUTSA_v10007947mg [Eutrema salsugineum]
gi|557095570|gb|ESQ36152.1| hypothetical protein
EUTSA_v10007947mg [Eutrema salsugineum]
Length = 375
Score = 73.6 bits (179), Expect = 6e-11
Identities = 33/42 (78%), Positives = 39/42 (92%)
Frame = +1
Query: 163 MASSSTTSAVYVHVIEDVINKVREEFVNNGGAGEGVLQELQG 288
MA+++TTSAVY+HVIEDV+NKVREEF+NNGG GE VL ELQG
Sbjct: 1 MATTTTTSAVYIHVIEDVVNKVREEFINNGGPGESVLNELQG 42
>ref|XP_006417801.1| hypothetical protein EUTSA_v10007946mg [Eutrema salsugineum]
gi|312282103|dbj|BAJ33917.1| unnamed protein product
[Thellungiella halophila] gi|557095572|gb|ESQ36154.1|
hypothetical protein EUTSA_v10007946mg [Eutrema
salsugineum]
Length = 375
Score = 73.6 bits (179), Expect = 6e-11
Identities = 33/42 (78%), Positives = 39/42 (92%)
Frame = +1
Query: 163 MASSSTTSAVYVHVIEDVINKVREEFVNNGGAGEGVLQELQG 288
MA+++TTSAVY+HVIEDV+NKVREEF+NNGG GE VL ELQG
Sbjct: 1 MATTTTTSAVYIHVIEDVVNKVREEFINNGGPGESVLNELQG 42
>gb|AAF79551.1|AC022464_9 F22G5.14 [Arabidopsis thaliana]
Length = 488
Score = 72.0 bits (175), Expect = 2e-10
Identities = 32/42 (76%), Positives = 38/42 (90%)
Frame = +1
Query: 163 MASSSTTSAVYVHVIEDVINKVREEFVNNGGAGEGVLQELQG 288
M +++TTSAVY+HVIEDV+NKVREEF+NNGG GE VL ELQG
Sbjct: 1 MGTTTTTSAVYIHVIEDVVNKVREEFINNGGPGESVLSELQG 42
>gb|AAF79573.1|AC022464_31 F22G5.18 [Arabidopsis thaliana]
Length = 475
Score = 72.0 bits (175), Expect = 2e-10
Identities = 32/42 (76%), Positives = 38/42 (90%)
Frame = +1
Query: 163 MASSSTTSAVYVHVIEDVINKVREEFVNNGGAGEGVLQELQG 288
M +++TTSAVY+HVIEDV+NKVREEF+NNGG GE VL ELQG
Sbjct: 1 MGTTTTTSAVYIHVIEDVVNKVREEFINNGGPGESVLSELQG 42
>ref|XP_002892402.1| transcription factor IIA large subunit [Arabidopsis lyrata subsp.
lyrata] gi|297338244|gb|EFH68661.1| transcription factor
IIA large subunit [Arabidopsis lyrata subsp. lyrata]
Length = 375
Score = 72.0 bits (175), Expect = 2e-10
Identities = 32/42 (76%), Positives = 38/42 (90%)
Frame = +1
Query: 163 MASSSTTSAVYVHVIEDVINKVREEFVNNGGAGEGVLQELQG 288
M +++TTSAVY+HVIEDV+NKVREEF+NNGG GE VL ELQG
Sbjct: 1 MGTTTTTSAVYIHVIEDVVNKVREEFINNGGPGESVLSELQG 42
>ref|XP_002889649.1| hypothetical protein ARALYDRAFT_470771 [Arabidopsis lyrata subsp.
lyrata] gi|297335491|gb|EFH65908.1| hypothetical protein
ARALYDRAFT_470771 [Arabidopsis lyrata subsp. lyrata]
Length = 373
Score = 72.0 bits (175), Expect = 2e-10
Identities = 32/42 (76%), Positives = 38/42 (90%)
Frame = +1
Query: 163 MASSSTTSAVYVHVIEDVINKVREEFVNNGGAGEGVLQELQG 288
M +++TTSAVY+HVIEDV+NKVREEF+NNGG GE VL ELQG
Sbjct: 1 MGTTTTTSAVYIHVIEDVVNKVREEFINNGGPGESVLSELQG 42
>emb|CAA67368.1| TFIIA [Arabidopsis thaliana]
Length = 375
Score = 72.0 bits (175), Expect = 2e-10
Identities = 32/42 (76%), Positives = 38/42 (90%)
Frame = +1
Query: 163 MASSSTTSAVYVHVIEDVINKVREEFVNNGGAGEGVLQELQG 288
M +++TTSAVY+HVIEDV+NKVREEF+NNGG GE VL ELQG
Sbjct: 1 MGTTTTTSAVYIHVIEDVVNKVREEFINNGGPGESVLSELQG 42
>ref|NP_850937.1| transcription factor IIA, alpha/beta subunit [Arabidopsis thaliana]
gi|30680153|ref|NP_172228.3| transcription factor IIA,
alpha/beta subunit [Arabidopsis thaliana]
gi|2826884|emb|CAA11525.1| transcription factor IIA
large subunit [Arabidopsis thaliana]
gi|39545932|gb|AAR28029.1| TFIIA-L1 [Arabidopsis
thaliana] gi|222423282|dbj|BAH19617.1| AT1G07480
[Arabidopsis thaliana] gi|225897890|dbj|BAH30277.1|
hypothetical protein [Arabidopsis thaliana]
gi|332190011|gb|AEE28132.1| transcription factor IIA,
alpha/beta subunit [Arabidopsis thaliana]
gi|332190012|gb|AEE28133.1| transcription factor IIA,
alpha/beta subunit [Arabidopsis thaliana]
Length = 375
Score = 72.0 bits (175), Expect = 2e-10
Identities = 32/42 (76%), Positives = 38/42 (90%)
Frame = +1
Query: 163 MASSSTTSAVYVHVIEDVINKVREEFVNNGGAGEGVLQELQG 288
M +++TTSAVY+HVIEDV+NKVREEF+NNGG GE VL ELQG
Sbjct: 1 MGTTTTTSAVYIHVIEDVVNKVREEFINNGGPGESVLSELQG 42
>ref|NP_563790.1| transcription factor IIA, alpha/beta subunit [Arabidopsis thaliana]
gi|15983370|gb|AAL11553.1|AF424559_1 At1g07470/F22G5_13
[Arabidopsis thaliana] gi|14532726|gb|AAK64164.1|
putative transcription factor IIA large subunit
[Arabidopsis thaliana] gi|15146226|gb|AAK83596.1|
At1g07470/F22G5_13 [Arabidopsis thaliana]
gi|21554033|gb|AAM63114.1| transcription factor IIA
large subunit [Arabidopsis thaliana]
gi|22136784|gb|AAM91736.1| putative transcription factor
IIA large subunit [Arabidopsis thaliana]
gi|39545872|gb|AAR27999.1| TFIIA-L2 [Arabidopsis
thaliana] gi|332190008|gb|AEE28129.1| transcription
factor IIA, alpha/beta subunit [Arabidopsis thaliana]
Length = 375
Score = 72.0 bits (175), Expect = 2e-10
Identities = 32/42 (76%), Positives = 38/42 (90%)
Frame = +1
Query: 163 MASSSTTSAVYVHVIEDVINKVREEFVNNGGAGEGVLQELQG 288
M +++TTSAVY+HVIEDV+NKVREEF+NNGG GE VL ELQG
Sbjct: 1 MGTTTTTSAVYIHVIEDVVNKVREEFINNGGPGESVLSELQG 42
>ref|XP_011080825.1| PREDICTED: transcription initiation factor IIA large subunit-like
[Sesamum indicum]
Length = 410
Score = 71.6 bits (174), Expect = 2e-10
Identities = 33/40 (82%), Positives = 37/40 (92%)
Frame = +1
Query: 169 SSSTTSAVYVHVIEDVINKVREEFVNNGGAGEGVLQELQG 288
+SSTTS VY+HVIEDVINKVR+EF+NNGG GEGVL ELQG
Sbjct: 2 ASSTTSNVYIHVIEDVINKVRDEFINNGGPGEGVLNELQG 41
>ref|XP_010521880.1| PREDICTED: transcription initiation factor IIA subunit 1-like
[Tarenaya hassleriana]
Length = 366
Score = 71.6 bits (174), Expect = 2e-10
Identities = 32/42 (76%), Positives = 39/42 (92%)
Frame = +1
Query: 163 MASSSTTSAVYVHVIEDVINKVREEFVNNGGAGEGVLQELQG 288
MA+S+TTSA+Y+HVIEDVINKVR+EF+NNGG GE VL +LQG
Sbjct: 1 MAASTTTSALYIHVIEDVINKVRDEFINNGGPGESVLNDLQG 42
>ref|XP_012066966.1| PREDICTED: transcription initiation factor IIA large subunit
[Jatropha curcas] gi|643735683|gb|KDP42211.1|
hypothetical protein JCGZ_02941 [Jatropha curcas]
Length = 407
Score = 71.6 bits (174), Expect = 2e-10
Identities = 33/42 (78%), Positives = 37/42 (88%)
Frame = +1
Query: 163 MASSSTTSAVYVHVIEDVINKVREEFVNNGGAGEGVLQELQG 288
MA+SS TS VY+HVIEDVINKVR+EF+NNGG GE VL ELQG
Sbjct: 1 MATSSATSTVYIHVIEDVINKVRDEFINNGGPGESVLNELQG 42
>gb|ABW81076.1| TF1 [Cleome spinosa]
Length = 385
Score = 71.6 bits (174), Expect = 2e-10
Identities = 32/42 (76%), Positives = 39/42 (92%)
Frame = +1
Query: 163 MASSSTTSAVYVHVIEDVINKVREEFVNNGGAGEGVLQELQG 288
MA+S+TTSA+Y+HVIEDVINKVR+EF+NNGG GE VL +LQG
Sbjct: 1 MAASTTTSALYIHVIEDVINKVRDEFINNGGPGESVLNDLQG 42
>ref|XP_010535450.1| PREDICTED: transcription initiation factor IIA large subunit-like
[Tarenaya hassleriana]
Length = 361
Score = 70.9 bits (172), Expect = 4e-10
Identities = 33/41 (80%), Positives = 38/41 (92%)
Frame = +1
Query: 163 MASSSTTSAVYVHVIEDVINKVREEFVNNGGAGEGVLQELQ 285
MA+S+TTSAVY+HVIEDVINKVR+EFVNNGG GE VL +LQ
Sbjct: 1 MAASTTTSAVYIHVIEDVINKVRDEFVNNGGPGESVLNQLQ 41
>ref|XP_007016334.1| Transcription initiation factor IIA subunit 1 [Theobroma cacao]
gi|508786697|gb|EOY33953.1| Transcription initiation
factor IIA subunit 1 [Theobroma cacao]
Length = 393
Score = 70.9 bits (172), Expect = 4e-10
Identities = 33/40 (82%), Positives = 37/40 (92%)
Frame = +1
Query: 169 SSSTTSAVYVHVIEDVINKVREEFVNNGGAGEGVLQELQG 288
+SSTTSAVY+HVIEDVINKVR+EF+NNGG GE VL ELQG
Sbjct: 2 ASSTTSAVYIHVIEDVINKVRDEFINNGGPGETVLNELQG 41
>ref|XP_009110942.1| PREDICTED: transcription initiation factor IIA large subunit-like
[Brassica rapa]
Length = 376
Score = 70.5 bits (171), Expect = 5e-10
Identities = 32/42 (76%), Positives = 38/42 (90%)
Frame = +1
Query: 163 MASSSTTSAVYVHVIEDVINKVREEFVNNGGAGEGVLQELQG 288
MA+++TTS VY+HVIEDV++KVREEFVNNGG GE VL ELQG
Sbjct: 1 MATTTTTSGVYIHVIEDVVSKVREEFVNNGGPGESVLSELQG 42
>ref|XP_013599856.1| PREDICTED: transcription initiation factor IIA large subunit-like
[Brassica oleracea var. oleracea]
gi|674923169|emb|CDY09915.1| BnaC08g45360D [Brassica
napus]
Length = 375
Score = 70.5 bits (171), Expect = 5e-10
Identities = 32/42 (76%), Positives = 38/42 (90%)
Frame = +1
Query: 163 MASSSTTSAVYVHVIEDVINKVREEFVNNGGAGEGVLQELQG 288
MA+++TTS VY+HVIEDV++KVREEFVNNGG GE VL ELQG
Sbjct: 1 MATTTTTSGVYIHVIEDVVSKVREEFVNNGGPGESVLSELQG 42
>ref|XP_013657500.1| PREDICTED: transcription initiation factor IIA large subunit-like
[Brassica napus] gi|923694206|ref|XP_013657556.1|
PREDICTED: transcription initiation factor IIA large
subunit-like [Brassica napus]
gi|923694210|ref|XP_013657557.1| PREDICTED:
transcription initiation factor IIA large subunit-like
[Brassica napus] gi|674917751|emb|CDY15611.1|
BnaA08g28950D [Brassica napus]
Length = 376
Score = 70.5 bits (171), Expect = 5e-10
Identities = 32/42 (76%), Positives = 38/42 (90%)
Frame = +1
Query: 163 MASSSTTSAVYVHVIEDVINKVREEFVNNGGAGEGVLQELQG 288
MA+++TTS VY+HVIEDV++KVREEFVNNGG GE VL ELQG
Sbjct: 1 MATTTTTSGVYIHVIEDVVSKVREEFVNNGGPGESVLSELQG 42
>ref|XP_013600458.1| PREDICTED: transcription initiation factor IIA large subunit-like
[Brassica oleracea var. oleracea]
Length = 371
Score = 70.1 bits (170), Expect = 6e-10
Identities = 31/42 (73%), Positives = 38/42 (90%)
Frame = +1
Query: 163 MASSSTTSAVYVHVIEDVINKVREEFVNNGGAGEGVLQELQG 288
MA+++TTS VY+HVIEDV++KVREEF+NNGG GE VL ELQG
Sbjct: 1 MATTTTTSGVYIHVIEDVVSKVREEFINNGGPGESVLSELQG 42
>ref|XP_009118437.1| PREDICTED: transcription initiation factor IIA large subunit-like
isoform X2 [Brassica rapa]
Length = 371
Score = 70.1 bits (170), Expect = 6e-10
Identities = 32/42 (76%), Positives = 38/42 (90%)
Frame = +1
Query: 163 MASSSTTSAVYVHVIEDVINKVREEFVNNGGAGEGVLQELQG 288
MA+++TTS VY+HVIEDV++KVREEFVNNGG GE VL ELQG
Sbjct: 1 MATTTTTSGVYIHVIEDVVSKVREEFVNNGGPGESVLAELQG 42