BLASTX nr result

ID: Cornus23_contig00021455 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00021455
         (288 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006417799.1| hypothetical protein EUTSA_v10007947mg [Eutr...    74   6e-11
ref|XP_006417801.1| hypothetical protein EUTSA_v10007946mg [Eutr...    74   6e-11
gb|AAF79551.1|AC022464_9 F22G5.14 [Arabidopsis thaliana]               72   2e-10
gb|AAF79573.1|AC022464_31 F22G5.18 [Arabidopsis thaliana]              72   2e-10
ref|XP_002892402.1| transcription factor IIA large subunit [Arab...    72   2e-10
ref|XP_002889649.1| hypothetical protein ARALYDRAFT_470771 [Arab...    72   2e-10
emb|CAA67368.1| TFIIA [Arabidopsis thaliana]                           72   2e-10
ref|NP_850937.1| transcription factor IIA, alpha/beta subunit [A...    72   2e-10
ref|NP_563790.1| transcription factor IIA, alpha/beta subunit [A...    72   2e-10
ref|XP_011080825.1| PREDICTED: transcription initiation factor I...    72   2e-10
ref|XP_010521880.1| PREDICTED: transcription initiation factor I...    72   2e-10
ref|XP_012066966.1| PREDICTED: transcription initiation factor I...    72   2e-10
gb|ABW81076.1| TF1 [Cleome spinosa]                                    72   2e-10
ref|XP_010535450.1| PREDICTED: transcription initiation factor I...    71   4e-10
ref|XP_007016334.1| Transcription initiation factor IIA subunit ...    71   4e-10
ref|XP_009110942.1| PREDICTED: transcription initiation factor I...    70   5e-10
ref|XP_013599856.1| PREDICTED: transcription initiation factor I...    70   5e-10
ref|XP_013657500.1| PREDICTED: transcription initiation factor I...    70   5e-10
ref|XP_013600458.1| PREDICTED: transcription initiation factor I...    70   6e-10
ref|XP_009118437.1| PREDICTED: transcription initiation factor I...    70   6e-10

>ref|XP_006417799.1| hypothetical protein EUTSA_v10007947mg [Eutrema salsugineum]
           gi|557095570|gb|ESQ36152.1| hypothetical protein
           EUTSA_v10007947mg [Eutrema salsugineum]
          Length = 375

 Score = 73.6 bits (179), Expect = 6e-11
 Identities = 33/42 (78%), Positives = 39/42 (92%)
 Frame = +1

Query: 163 MASSSTTSAVYVHVIEDVINKVREEFVNNGGAGEGVLQELQG 288
           MA+++TTSAVY+HVIEDV+NKVREEF+NNGG GE VL ELQG
Sbjct: 1   MATTTTTSAVYIHVIEDVVNKVREEFINNGGPGESVLNELQG 42


>ref|XP_006417801.1| hypothetical protein EUTSA_v10007946mg [Eutrema salsugineum]
           gi|312282103|dbj|BAJ33917.1| unnamed protein product
           [Thellungiella halophila] gi|557095572|gb|ESQ36154.1|
           hypothetical protein EUTSA_v10007946mg [Eutrema
           salsugineum]
          Length = 375

 Score = 73.6 bits (179), Expect = 6e-11
 Identities = 33/42 (78%), Positives = 39/42 (92%)
 Frame = +1

Query: 163 MASSSTTSAVYVHVIEDVINKVREEFVNNGGAGEGVLQELQG 288
           MA+++TTSAVY+HVIEDV+NKVREEF+NNGG GE VL ELQG
Sbjct: 1   MATTTTTSAVYIHVIEDVVNKVREEFINNGGPGESVLNELQG 42


>gb|AAF79551.1|AC022464_9 F22G5.14 [Arabidopsis thaliana]
          Length = 488

 Score = 72.0 bits (175), Expect = 2e-10
 Identities = 32/42 (76%), Positives = 38/42 (90%)
 Frame = +1

Query: 163 MASSSTTSAVYVHVIEDVINKVREEFVNNGGAGEGVLQELQG 288
           M +++TTSAVY+HVIEDV+NKVREEF+NNGG GE VL ELQG
Sbjct: 1   MGTTTTTSAVYIHVIEDVVNKVREEFINNGGPGESVLSELQG 42


>gb|AAF79573.1|AC022464_31 F22G5.18 [Arabidopsis thaliana]
          Length = 475

 Score = 72.0 bits (175), Expect = 2e-10
 Identities = 32/42 (76%), Positives = 38/42 (90%)
 Frame = +1

Query: 163 MASSSTTSAVYVHVIEDVINKVREEFVNNGGAGEGVLQELQG 288
           M +++TTSAVY+HVIEDV+NKVREEF+NNGG GE VL ELQG
Sbjct: 1   MGTTTTTSAVYIHVIEDVVNKVREEFINNGGPGESVLSELQG 42


>ref|XP_002892402.1| transcription factor IIA large subunit [Arabidopsis lyrata subsp.
           lyrata] gi|297338244|gb|EFH68661.1| transcription factor
           IIA large subunit [Arabidopsis lyrata subsp. lyrata]
          Length = 375

 Score = 72.0 bits (175), Expect = 2e-10
 Identities = 32/42 (76%), Positives = 38/42 (90%)
 Frame = +1

Query: 163 MASSSTTSAVYVHVIEDVINKVREEFVNNGGAGEGVLQELQG 288
           M +++TTSAVY+HVIEDV+NKVREEF+NNGG GE VL ELQG
Sbjct: 1   MGTTTTTSAVYIHVIEDVVNKVREEFINNGGPGESVLSELQG 42


>ref|XP_002889649.1| hypothetical protein ARALYDRAFT_470771 [Arabidopsis lyrata subsp.
           lyrata] gi|297335491|gb|EFH65908.1| hypothetical protein
           ARALYDRAFT_470771 [Arabidopsis lyrata subsp. lyrata]
          Length = 373

 Score = 72.0 bits (175), Expect = 2e-10
 Identities = 32/42 (76%), Positives = 38/42 (90%)
 Frame = +1

Query: 163 MASSSTTSAVYVHVIEDVINKVREEFVNNGGAGEGVLQELQG 288
           M +++TTSAVY+HVIEDV+NKVREEF+NNGG GE VL ELQG
Sbjct: 1   MGTTTTTSAVYIHVIEDVVNKVREEFINNGGPGESVLSELQG 42


>emb|CAA67368.1| TFIIA [Arabidopsis thaliana]
          Length = 375

 Score = 72.0 bits (175), Expect = 2e-10
 Identities = 32/42 (76%), Positives = 38/42 (90%)
 Frame = +1

Query: 163 MASSSTTSAVYVHVIEDVINKVREEFVNNGGAGEGVLQELQG 288
           M +++TTSAVY+HVIEDV+NKVREEF+NNGG GE VL ELQG
Sbjct: 1   MGTTTTTSAVYIHVIEDVVNKVREEFINNGGPGESVLSELQG 42


>ref|NP_850937.1| transcription factor IIA, alpha/beta subunit [Arabidopsis thaliana]
           gi|30680153|ref|NP_172228.3| transcription factor IIA,
           alpha/beta subunit [Arabidopsis thaliana]
           gi|2826884|emb|CAA11525.1| transcription factor IIA
           large subunit [Arabidopsis thaliana]
           gi|39545932|gb|AAR28029.1| TFIIA-L1 [Arabidopsis
           thaliana] gi|222423282|dbj|BAH19617.1| AT1G07480
           [Arabidopsis thaliana] gi|225897890|dbj|BAH30277.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|332190011|gb|AEE28132.1| transcription factor IIA,
           alpha/beta subunit [Arabidopsis thaliana]
           gi|332190012|gb|AEE28133.1| transcription factor IIA,
           alpha/beta subunit [Arabidopsis thaliana]
          Length = 375

 Score = 72.0 bits (175), Expect = 2e-10
 Identities = 32/42 (76%), Positives = 38/42 (90%)
 Frame = +1

Query: 163 MASSSTTSAVYVHVIEDVINKVREEFVNNGGAGEGVLQELQG 288
           M +++TTSAVY+HVIEDV+NKVREEF+NNGG GE VL ELQG
Sbjct: 1   MGTTTTTSAVYIHVIEDVVNKVREEFINNGGPGESVLSELQG 42


>ref|NP_563790.1| transcription factor IIA, alpha/beta subunit [Arabidopsis thaliana]
           gi|15983370|gb|AAL11553.1|AF424559_1 At1g07470/F22G5_13
           [Arabidopsis thaliana] gi|14532726|gb|AAK64164.1|
           putative transcription factor IIA large subunit
           [Arabidopsis thaliana] gi|15146226|gb|AAK83596.1|
           At1g07470/F22G5_13 [Arabidopsis thaliana]
           gi|21554033|gb|AAM63114.1| transcription factor IIA
           large subunit [Arabidopsis thaliana]
           gi|22136784|gb|AAM91736.1| putative transcription factor
           IIA large subunit [Arabidopsis thaliana]
           gi|39545872|gb|AAR27999.1| TFIIA-L2 [Arabidopsis
           thaliana] gi|332190008|gb|AEE28129.1| transcription
           factor IIA, alpha/beta subunit [Arabidopsis thaliana]
          Length = 375

 Score = 72.0 bits (175), Expect = 2e-10
 Identities = 32/42 (76%), Positives = 38/42 (90%)
 Frame = +1

Query: 163 MASSSTTSAVYVHVIEDVINKVREEFVNNGGAGEGVLQELQG 288
           M +++TTSAVY+HVIEDV+NKVREEF+NNGG GE VL ELQG
Sbjct: 1   MGTTTTTSAVYIHVIEDVVNKVREEFINNGGPGESVLSELQG 42


>ref|XP_011080825.1| PREDICTED: transcription initiation factor IIA large subunit-like
           [Sesamum indicum]
          Length = 410

 Score = 71.6 bits (174), Expect = 2e-10
 Identities = 33/40 (82%), Positives = 37/40 (92%)
 Frame = +1

Query: 169 SSSTTSAVYVHVIEDVINKVREEFVNNGGAGEGVLQELQG 288
           +SSTTS VY+HVIEDVINKVR+EF+NNGG GEGVL ELQG
Sbjct: 2   ASSTTSNVYIHVIEDVINKVRDEFINNGGPGEGVLNELQG 41


>ref|XP_010521880.1| PREDICTED: transcription initiation factor IIA subunit 1-like
           [Tarenaya hassleriana]
          Length = 366

 Score = 71.6 bits (174), Expect = 2e-10
 Identities = 32/42 (76%), Positives = 39/42 (92%)
 Frame = +1

Query: 163 MASSSTTSAVYVHVIEDVINKVREEFVNNGGAGEGVLQELQG 288
           MA+S+TTSA+Y+HVIEDVINKVR+EF+NNGG GE VL +LQG
Sbjct: 1   MAASTTTSALYIHVIEDVINKVRDEFINNGGPGESVLNDLQG 42


>ref|XP_012066966.1| PREDICTED: transcription initiation factor IIA large subunit
           [Jatropha curcas] gi|643735683|gb|KDP42211.1|
           hypothetical protein JCGZ_02941 [Jatropha curcas]
          Length = 407

 Score = 71.6 bits (174), Expect = 2e-10
 Identities = 33/42 (78%), Positives = 37/42 (88%)
 Frame = +1

Query: 163 MASSSTTSAVYVHVIEDVINKVREEFVNNGGAGEGVLQELQG 288
           MA+SS TS VY+HVIEDVINKVR+EF+NNGG GE VL ELQG
Sbjct: 1   MATSSATSTVYIHVIEDVINKVRDEFINNGGPGESVLNELQG 42


>gb|ABW81076.1| TF1 [Cleome spinosa]
          Length = 385

 Score = 71.6 bits (174), Expect = 2e-10
 Identities = 32/42 (76%), Positives = 39/42 (92%)
 Frame = +1

Query: 163 MASSSTTSAVYVHVIEDVINKVREEFVNNGGAGEGVLQELQG 288
           MA+S+TTSA+Y+HVIEDVINKVR+EF+NNGG GE VL +LQG
Sbjct: 1   MAASTTTSALYIHVIEDVINKVRDEFINNGGPGESVLNDLQG 42


>ref|XP_010535450.1| PREDICTED: transcription initiation factor IIA large subunit-like
           [Tarenaya hassleriana]
          Length = 361

 Score = 70.9 bits (172), Expect = 4e-10
 Identities = 33/41 (80%), Positives = 38/41 (92%)
 Frame = +1

Query: 163 MASSSTTSAVYVHVIEDVINKVREEFVNNGGAGEGVLQELQ 285
           MA+S+TTSAVY+HVIEDVINKVR+EFVNNGG GE VL +LQ
Sbjct: 1   MAASTTTSAVYIHVIEDVINKVRDEFVNNGGPGESVLNQLQ 41


>ref|XP_007016334.1| Transcription initiation factor IIA subunit 1 [Theobroma cacao]
           gi|508786697|gb|EOY33953.1| Transcription initiation
           factor IIA subunit 1 [Theobroma cacao]
          Length = 393

 Score = 70.9 bits (172), Expect = 4e-10
 Identities = 33/40 (82%), Positives = 37/40 (92%)
 Frame = +1

Query: 169 SSSTTSAVYVHVIEDVINKVREEFVNNGGAGEGVLQELQG 288
           +SSTTSAVY+HVIEDVINKVR+EF+NNGG GE VL ELQG
Sbjct: 2   ASSTTSAVYIHVIEDVINKVRDEFINNGGPGETVLNELQG 41


>ref|XP_009110942.1| PREDICTED: transcription initiation factor IIA large subunit-like
           [Brassica rapa]
          Length = 376

 Score = 70.5 bits (171), Expect = 5e-10
 Identities = 32/42 (76%), Positives = 38/42 (90%)
 Frame = +1

Query: 163 MASSSTTSAVYVHVIEDVINKVREEFVNNGGAGEGVLQELQG 288
           MA+++TTS VY+HVIEDV++KVREEFVNNGG GE VL ELQG
Sbjct: 1   MATTTTTSGVYIHVIEDVVSKVREEFVNNGGPGESVLSELQG 42


>ref|XP_013599856.1| PREDICTED: transcription initiation factor IIA large subunit-like
           [Brassica oleracea var. oleracea]
           gi|674923169|emb|CDY09915.1| BnaC08g45360D [Brassica
           napus]
          Length = 375

 Score = 70.5 bits (171), Expect = 5e-10
 Identities = 32/42 (76%), Positives = 38/42 (90%)
 Frame = +1

Query: 163 MASSSTTSAVYVHVIEDVINKVREEFVNNGGAGEGVLQELQG 288
           MA+++TTS VY+HVIEDV++KVREEFVNNGG GE VL ELQG
Sbjct: 1   MATTTTTSGVYIHVIEDVVSKVREEFVNNGGPGESVLSELQG 42


>ref|XP_013657500.1| PREDICTED: transcription initiation factor IIA large subunit-like
           [Brassica napus] gi|923694206|ref|XP_013657556.1|
           PREDICTED: transcription initiation factor IIA large
           subunit-like [Brassica napus]
           gi|923694210|ref|XP_013657557.1| PREDICTED:
           transcription initiation factor IIA large subunit-like
           [Brassica napus] gi|674917751|emb|CDY15611.1|
           BnaA08g28950D [Brassica napus]
          Length = 376

 Score = 70.5 bits (171), Expect = 5e-10
 Identities = 32/42 (76%), Positives = 38/42 (90%)
 Frame = +1

Query: 163 MASSSTTSAVYVHVIEDVINKVREEFVNNGGAGEGVLQELQG 288
           MA+++TTS VY+HVIEDV++KVREEFVNNGG GE VL ELQG
Sbjct: 1   MATTTTTSGVYIHVIEDVVSKVREEFVNNGGPGESVLSELQG 42


>ref|XP_013600458.1| PREDICTED: transcription initiation factor IIA large subunit-like
           [Brassica oleracea var. oleracea]
          Length = 371

 Score = 70.1 bits (170), Expect = 6e-10
 Identities = 31/42 (73%), Positives = 38/42 (90%)
 Frame = +1

Query: 163 MASSSTTSAVYVHVIEDVINKVREEFVNNGGAGEGVLQELQG 288
           MA+++TTS VY+HVIEDV++KVREEF+NNGG GE VL ELQG
Sbjct: 1   MATTTTTSGVYIHVIEDVVSKVREEFINNGGPGESVLSELQG 42


>ref|XP_009118437.1| PREDICTED: transcription initiation factor IIA large subunit-like
           isoform X2 [Brassica rapa]
          Length = 371

 Score = 70.1 bits (170), Expect = 6e-10
 Identities = 32/42 (76%), Positives = 38/42 (90%)
 Frame = +1

Query: 163 MASSSTTSAVYVHVIEDVINKVREEFVNNGGAGEGVLQELQG 288
           MA+++TTS VY+HVIEDV++KVREEFVNNGG GE VL ELQG
Sbjct: 1   MATTTTTSGVYIHVIEDVVSKVREEFVNNGGPGESVLAELQG 42


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