BLASTX nr result
ID: Cornus23_contig00021021
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cornus23_contig00021021
(372 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007202548.1| hypothetical protein PRUPE_ppa011170mg [Prun... 92 1e-16
ref|XP_009587103.1| PREDICTED: cleavage and polyadenylation spec... 92 2e-16
ref|XP_008352382.1| PREDICTED: cleavage and polyadenylation spec... 91 3e-16
ref|XP_008337783.1| PREDICTED: cleavage and polyadenylation spec... 91 3e-16
ref|XP_009340472.1| PREDICTED: cleavage and polyadenylation spec... 91 3e-16
ref|XP_009340471.1| PREDICTED: cleavage and polyadenylation spec... 91 3e-16
ref|XP_008242182.1| PREDICTED: cleavage and polyadenylation spec... 91 4e-16
ref|XP_002514092.1| pre-mRNA cleavage factor im, 25kD subunit, p... 89 1e-15
ref|XP_008459551.1| PREDICTED: cleavage and polyadenylation spec... 88 3e-15
ref|XP_004287592.1| PREDICTED: pre-mRNA cleavage factor Im 25 kD... 88 3e-15
ref|XP_006451545.1| hypothetical protein CICLE_v10009459mg [Citr... 87 4e-15
ref|XP_006451544.1| hypothetical protein CICLE_v10009459mg [Citr... 87 4e-15
gb|KRH37446.1| hypothetical protein GLYMA_09G066700 [Glycine max... 87 5e-15
gb|KRH37445.1| hypothetical protein GLYMA_09G066700 [Glycine max] 87 5e-15
emb|CDP03125.1| unnamed protein product [Coffea canephora] 87 5e-15
ref|NP_001242595.1| uncharacterized protein LOC100791216 [Glycin... 87 5e-15
ref|XP_009785463.1| PREDICTED: cleavage and polyadenylation spec... 86 8e-15
ref|XP_009785462.1| PREDICTED: cleavage and polyadenylation spec... 86 8e-15
ref|XP_004141062.1| PREDICTED: pre-mRNA cleavage factor Im 25 kD... 86 8e-15
ref|XP_011003361.1| PREDICTED: pre-mRNA cleavage factor Im 25 kD... 84 3e-14
>ref|XP_007202548.1| hypothetical protein PRUPE_ppa011170mg [Prunus persica]
gi|462398079|gb|EMJ03747.1| hypothetical protein
PRUPE_ppa011170mg [Prunus persica]
Length = 221
Score = 92.4 bits (228), Expect = 1e-16
Identities = 42/58 (72%), Positives = 52/58 (89%)
Frame = -1
Query: 174 DNQNQSHVLNIYPLSNYYFGSKDAVPFKDETLADRVLRMKSNYAAYGLRTCVQGVILV 1
DN +QS +L+IYPLS+YYF SK+A+P KDE++ADR+ RMKSNYAAYGLRTCV+ VILV
Sbjct: 20 DNGDQSRILDIYPLSSYYFSSKEALPIKDESVADRLQRMKSNYAAYGLRTCVEAVILV 77
>ref|XP_009587103.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like [Nicotiana tomentosiformis]
Length = 79
Score = 91.7 bits (226), Expect = 2e-16
Identities = 43/55 (78%), Positives = 49/55 (89%)
Frame = -1
Query: 165 NQSHVLNIYPLSNYYFGSKDAVPFKDETLADRVLRMKSNYAAYGLRTCVQGVILV 1
N S+VLNIYPL++YYFGSK+AV FK+ETLADRVLRMK NY YGLRTCVQ V+LV
Sbjct: 23 NSSNVLNIYPLNHYYFGSKEAVQFKEETLADRVLRMKLNYDTYGLRTCVQAVLLV 77
>ref|XP_008352382.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like [Malus domestica]
Length = 177
Score = 91.3 bits (225), Expect = 3e-16
Identities = 42/58 (72%), Positives = 50/58 (86%)
Frame = -1
Query: 174 DNQNQSHVLNIYPLSNYYFGSKDAVPFKDETLADRVLRMKSNYAAYGLRTCVQGVILV 1
DN +QS L+IYPLS+YYF SK+A+P KDET ADR+ R+KSNYAAYGLRTCV+ VILV
Sbjct: 20 DNDDQSRTLDIYPLSSYYFASKEAIPVKDETPADRLRRLKSNYAAYGLRTCVEAVILV 77
>ref|XP_008337783.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5, partial [Malus domestica]
Length = 222
Score = 91.3 bits (225), Expect = 3e-16
Identities = 42/58 (72%), Positives = 50/58 (86%)
Frame = -1
Query: 174 DNQNQSHVLNIYPLSNYYFGSKDAVPFKDETLADRVLRMKSNYAAYGLRTCVQGVILV 1
DN +QS L+IYPLS+YYF SK+A+P KDET ADR+ R+KSNYAAYGLRTCV+ VILV
Sbjct: 21 DNDDQSRTLDIYPLSSYYFASKEAIPVKDETPADRLRRLKSNYAAYGLRTCVEAVILV 78
>ref|XP_009340472.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like isoform X2 [Pyrus x bretschneideri]
Length = 192
Score = 90.9 bits (224), Expect = 3e-16
Identities = 42/58 (72%), Positives = 50/58 (86%)
Frame = -1
Query: 174 DNQNQSHVLNIYPLSNYYFGSKDAVPFKDETLADRVLRMKSNYAAYGLRTCVQGVILV 1
DN +QS L+IYPLS+YYF SK+A+P KDET ADR+ R+KSNYAAYGLRTCV+ VILV
Sbjct: 20 DNDDQSRTLDIYPLSSYYFASKEAIPVKDETPADRLHRLKSNYAAYGLRTCVEAVILV 77
>ref|XP_009340471.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like isoform X1 [Pyrus x bretschneideri]
Length = 221
Score = 90.9 bits (224), Expect = 3e-16
Identities = 42/58 (72%), Positives = 50/58 (86%)
Frame = -1
Query: 174 DNQNQSHVLNIYPLSNYYFGSKDAVPFKDETLADRVLRMKSNYAAYGLRTCVQGVILV 1
DN +QS L+IYPLS+YYF SK+A+P KDET ADR+ R+KSNYAAYGLRTCV+ VILV
Sbjct: 20 DNDDQSRTLDIYPLSSYYFASKEAIPVKDETPADRLHRLKSNYAAYGLRTCVEAVILV 77
>ref|XP_008242182.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5 [Prunus mume]
Length = 221
Score = 90.5 bits (223), Expect = 4e-16
Identities = 41/58 (70%), Positives = 52/58 (89%)
Frame = -1
Query: 174 DNQNQSHVLNIYPLSNYYFGSKDAVPFKDETLADRVLRMKSNYAAYGLRTCVQGVILV 1
DN +QS +L+IYPLS+YYF SK+A+P KDE++ADR+ RMKS+YAAYGLRTCV+ VILV
Sbjct: 20 DNGDQSRILDIYPLSSYYFSSKEALPIKDESVADRLQRMKSSYAAYGLRTCVEAVILV 77
>ref|XP_002514092.1| pre-mRNA cleavage factor im, 25kD subunit, putative [Ricinus
communis] gi|223546548|gb|EEF48046.1| pre-mRNA cleavage
factor im, 25kD subunit, putative [Ricinus communis]
Length = 214
Score = 89.0 bits (219), Expect = 1e-15
Identities = 41/57 (71%), Positives = 49/57 (85%)
Frame = -1
Query: 171 NQNQSHVLNIYPLSNYYFGSKDAVPFKDETLADRVLRMKSNYAAYGLRTCVQGVILV 1
+++Q VL+IYPLS YYFGSKD +PF+DETL DRV RMKSNY A+GLRTCV+ VILV
Sbjct: 16 SRDQGFVLDIYPLSRYYFGSKDPLPFRDETLVDRVQRMKSNYLAHGLRTCVEAVILV 72
>ref|XP_008459551.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5 [Cucumis melo]
Length = 219
Score = 87.8 bits (216), Expect = 3e-15
Identities = 40/55 (72%), Positives = 49/55 (89%)
Frame = -1
Query: 165 NQSHVLNIYPLSNYYFGSKDAVPFKDETLADRVLRMKSNYAAYGLRTCVQGVILV 1
+Q ++IYPLSNYYFGSK+ + FKDETL+DR+LRMKSNYAAYGLRTCV+ V+LV
Sbjct: 21 HQLSYIDIYPLSNYYFGSKEPLLFKDETLSDRILRMKSNYAAYGLRTCVEAVMLV 75
>ref|XP_004287592.1| PREDICTED: pre-mRNA cleavage factor Im 25 kDa subunit 1 [Fragaria
vesca subsp. vesca]
Length = 218
Score = 87.8 bits (216), Expect = 3e-15
Identities = 41/57 (71%), Positives = 48/57 (84%)
Frame = -1
Query: 171 NQNQSHVLNIYPLSNYYFGSKDAVPFKDETLADRVLRMKSNYAAYGLRTCVQGVILV 1
+ QS L+IYPLS YYFGSK+A+PFKDETL DRV R+ SNYAAYGLRTCV+ V+LV
Sbjct: 18 DHTQSRQLDIYPLSCYYFGSKEAIPFKDETLDDRVQRLNSNYAAYGLRTCVEAVMLV 74
>ref|XP_006451545.1| hypothetical protein CICLE_v10009459mg [Citrus clementina]
gi|568843220|ref|XP_006475514.1| PREDICTED: cleavage and
polyadenylation specificity factor subunit 5-like
isoform X1 [Citrus sinensis] gi|557554771|gb|ESR64785.1|
hypothetical protein CICLE_v10009459mg [Citrus
clementina] gi|641836450|gb|KDO55414.1| hypothetical
protein CISIN_1g028063mg [Citrus sinensis]
Length = 214
Score = 87.4 bits (215), Expect = 4e-15
Identities = 39/57 (68%), Positives = 50/57 (87%)
Frame = -1
Query: 171 NQNQSHVLNIYPLSNYYFGSKDAVPFKDETLADRVLRMKSNYAAYGLRTCVQGVILV 1
+ +V++IYPLS+YYFGSK+A+PFKDETL +RVLRMKSNY A+GLRTCV+ V+LV
Sbjct: 14 SDRNGYVVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLV 70
>ref|XP_006451544.1| hypothetical protein CICLE_v10009459mg [Citrus clementina]
gi|557554770|gb|ESR64784.1| hypothetical protein
CICLE_v10009459mg [Citrus clementina]
gi|641836451|gb|KDO55415.1| hypothetical protein
CISIN_1g028063mg [Citrus sinensis]
Length = 196
Score = 87.4 bits (215), Expect = 4e-15
Identities = 39/57 (68%), Positives = 50/57 (87%)
Frame = -1
Query: 171 NQNQSHVLNIYPLSNYYFGSKDAVPFKDETLADRVLRMKSNYAAYGLRTCVQGVILV 1
+ +V++IYPLS+YYFGSK+A+PFKDETL +RVLRMKSNY A+GLRTCV+ V+LV
Sbjct: 14 SDRNGYVVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLV 70
>gb|KRH37446.1| hypothetical protein GLYMA_09G066700 [Glycine max]
gi|947088782|gb|KRH37447.1| hypothetical protein
GLYMA_09G066700 [Glycine max]
Length = 221
Score = 87.0 bits (214), Expect = 5e-15
Identities = 42/57 (73%), Positives = 48/57 (84%)
Frame = -1
Query: 171 NQNQSHVLNIYPLSNYYFGSKDAVPFKDETLADRVLRMKSNYAAYGLRTCVQGVILV 1
N +QS +IYPLS+YYFGSKDAVP KD TL DRVLRMKSNYAA G+RTCV+ V+LV
Sbjct: 21 NDDQSLEFDIYPLSSYYFGSKDAVPSKDLTLVDRVLRMKSNYAASGIRTCVEAVLLV 77
>gb|KRH37445.1| hypothetical protein GLYMA_09G066700 [Glycine max]
Length = 225
Score = 87.0 bits (214), Expect = 5e-15
Identities = 42/57 (73%), Positives = 48/57 (84%)
Frame = -1
Query: 171 NQNQSHVLNIYPLSNYYFGSKDAVPFKDETLADRVLRMKSNYAAYGLRTCVQGVILV 1
N +QS +IYPLS+YYFGSKDAVP KD TL DRVLRMKSNYAA G+RTCV+ V+LV
Sbjct: 21 NDDQSLEFDIYPLSSYYFGSKDAVPSKDLTLVDRVLRMKSNYAASGIRTCVEAVLLV 77
>emb|CDP03125.1| unnamed protein product [Coffea canephora]
Length = 218
Score = 87.0 bits (214), Expect = 5e-15
Identities = 40/56 (71%), Positives = 48/56 (85%)
Frame = -1
Query: 168 QNQSHVLNIYPLSNYYFGSKDAVPFKDETLADRVLRMKSNYAAYGLRTCVQGVILV 1
QN + L+IYPL+ YYFGSK+AVPFKDET +DR+LRMK NY A+GLRTCVQ V+LV
Sbjct: 19 QNYGNALDIYPLNCYYFGSKEAVPFKDETTSDRILRMKFNYDAHGLRTCVQAVMLV 74
>ref|NP_001242595.1| uncharacterized protein LOC100791216 [Glycine max]
gi|255640824|gb|ACU20695.1| unknown [Glycine max]
Length = 216
Score = 87.0 bits (214), Expect = 5e-15
Identities = 42/57 (73%), Positives = 48/57 (84%)
Frame = -1
Query: 171 NQNQSHVLNIYPLSNYYFGSKDAVPFKDETLADRVLRMKSNYAAYGLRTCVQGVILV 1
N +QS +IYPLS+YYFGSKDAVP KD TL DRVLRMKSNYAA G+RTCV+ V+LV
Sbjct: 21 NDDQSLEFDIYPLSSYYFGSKDAVPSKDLTLVDRVLRMKSNYAASGIRTCVEAVLLV 77
>ref|XP_009785463.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5 isoform X2 [Nicotiana sylvestris]
Length = 182
Score = 86.3 bits (212), Expect = 8e-15
Identities = 40/55 (72%), Positives = 49/55 (89%)
Frame = -1
Query: 165 NQSHVLNIYPLSNYYFGSKDAVPFKDETLADRVLRMKSNYAAYGLRTCVQGVILV 1
N S+VL+IYPL++YYFGSK+A+ FK+ETLADRVLRMK NY +GLRTCVQ V+LV
Sbjct: 23 NSSNVLDIYPLNHYYFGSKEALRFKEETLADRVLRMKLNYDTHGLRTCVQAVLLV 77
>ref|XP_009785462.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5 isoform X1 [Nicotiana sylvestris]
Length = 219
Score = 86.3 bits (212), Expect = 8e-15
Identities = 40/55 (72%), Positives = 49/55 (89%)
Frame = -1
Query: 165 NQSHVLNIYPLSNYYFGSKDAVPFKDETLADRVLRMKSNYAAYGLRTCVQGVILV 1
N S+VL+IYPL++YYFGSK+A+ FK+ETLADRVLRMK NY +GLRTCVQ V+LV
Sbjct: 23 NSSNVLDIYPLNHYYFGSKEALRFKEETLADRVLRMKLNYDTHGLRTCVQAVLLV 77
>ref|XP_004141062.1| PREDICTED: pre-mRNA cleavage factor Im 25 kDa subunit 1 [Cucumis
sativus] gi|700205403|gb|KGN60522.1| hypothetical
protein Csa_2G000310 [Cucumis sativus]
Length = 217
Score = 86.3 bits (212), Expect = 8e-15
Identities = 40/55 (72%), Positives = 49/55 (89%)
Frame = -1
Query: 165 NQSHVLNIYPLSNYYFGSKDAVPFKDETLADRVLRMKSNYAAYGLRTCVQGVILV 1
+Q ++IYPLSNYYFGSK+ + FKDETL+DRVLRMKSNYAA+GLRTCV+ V+LV
Sbjct: 19 HQLSYIDIYPLSNYYFGSKEPLLFKDETLSDRVLRMKSNYAAHGLRTCVEAVMLV 73
>ref|XP_011003361.1| PREDICTED: pre-mRNA cleavage factor Im 25 kDa subunit 1 isoform X2
[Populus euphratica]
Length = 173
Score = 84.3 bits (207), Expect = 3e-14
Identities = 39/58 (67%), Positives = 48/58 (82%)
Frame = -1
Query: 174 DNQNQSHVLNIYPLSNYYFGSKDAVPFKDETLADRVLRMKSNYAAYGLRTCVQGVILV 1
+N +QS V+ IYPL +YYFGSKD + F+DET+ADRV RMKSN+ A GLRTCVQ V+LV
Sbjct: 11 NNNHQSTVIEIYPLGSYYFGSKDPIAFRDETVADRVQRMKSNFNARGLRTCVQAVMLV 68