BLASTX nr result

ID: Cornus23_contig00021021 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00021021
         (372 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007202548.1| hypothetical protein PRUPE_ppa011170mg [Prun...    92   1e-16
ref|XP_009587103.1| PREDICTED: cleavage and polyadenylation spec...    92   2e-16
ref|XP_008352382.1| PREDICTED: cleavage and polyadenylation spec...    91   3e-16
ref|XP_008337783.1| PREDICTED: cleavage and polyadenylation spec...    91   3e-16
ref|XP_009340472.1| PREDICTED: cleavage and polyadenylation spec...    91   3e-16
ref|XP_009340471.1| PREDICTED: cleavage and polyadenylation spec...    91   3e-16
ref|XP_008242182.1| PREDICTED: cleavage and polyadenylation spec...    91   4e-16
ref|XP_002514092.1| pre-mRNA cleavage factor im, 25kD subunit, p...    89   1e-15
ref|XP_008459551.1| PREDICTED: cleavage and polyadenylation spec...    88   3e-15
ref|XP_004287592.1| PREDICTED: pre-mRNA cleavage factor Im 25 kD...    88   3e-15
ref|XP_006451545.1| hypothetical protein CICLE_v10009459mg [Citr...    87   4e-15
ref|XP_006451544.1| hypothetical protein CICLE_v10009459mg [Citr...    87   4e-15
gb|KRH37446.1| hypothetical protein GLYMA_09G066700 [Glycine max...    87   5e-15
gb|KRH37445.1| hypothetical protein GLYMA_09G066700 [Glycine max]      87   5e-15
emb|CDP03125.1| unnamed protein product [Coffea canephora]             87   5e-15
ref|NP_001242595.1| uncharacterized protein LOC100791216 [Glycin...    87   5e-15
ref|XP_009785463.1| PREDICTED: cleavage and polyadenylation spec...    86   8e-15
ref|XP_009785462.1| PREDICTED: cleavage and polyadenylation spec...    86   8e-15
ref|XP_004141062.1| PREDICTED: pre-mRNA cleavage factor Im 25 kD...    86   8e-15
ref|XP_011003361.1| PREDICTED: pre-mRNA cleavage factor Im 25 kD...    84   3e-14

>ref|XP_007202548.1| hypothetical protein PRUPE_ppa011170mg [Prunus persica]
           gi|462398079|gb|EMJ03747.1| hypothetical protein
           PRUPE_ppa011170mg [Prunus persica]
          Length = 221

 Score = 92.4 bits (228), Expect = 1e-16
 Identities = 42/58 (72%), Positives = 52/58 (89%)
 Frame = -1

Query: 174 DNQNQSHVLNIYPLSNYYFGSKDAVPFKDETLADRVLRMKSNYAAYGLRTCVQGVILV 1
           DN +QS +L+IYPLS+YYF SK+A+P KDE++ADR+ RMKSNYAAYGLRTCV+ VILV
Sbjct: 20  DNGDQSRILDIYPLSSYYFSSKEALPIKDESVADRLQRMKSNYAAYGLRTCVEAVILV 77


>ref|XP_009587103.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           5-like [Nicotiana tomentosiformis]
          Length = 79

 Score = 91.7 bits (226), Expect = 2e-16
 Identities = 43/55 (78%), Positives = 49/55 (89%)
 Frame = -1

Query: 165 NQSHVLNIYPLSNYYFGSKDAVPFKDETLADRVLRMKSNYAAYGLRTCVQGVILV 1
           N S+VLNIYPL++YYFGSK+AV FK+ETLADRVLRMK NY  YGLRTCVQ V+LV
Sbjct: 23  NSSNVLNIYPLNHYYFGSKEAVQFKEETLADRVLRMKLNYDTYGLRTCVQAVLLV 77


>ref|XP_008352382.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           5-like [Malus domestica]
          Length = 177

 Score = 91.3 bits (225), Expect = 3e-16
 Identities = 42/58 (72%), Positives = 50/58 (86%)
 Frame = -1

Query: 174 DNQNQSHVLNIYPLSNYYFGSKDAVPFKDETLADRVLRMKSNYAAYGLRTCVQGVILV 1
           DN +QS  L+IYPLS+YYF SK+A+P KDET ADR+ R+KSNYAAYGLRTCV+ VILV
Sbjct: 20  DNDDQSRTLDIYPLSSYYFASKEAIPVKDETPADRLRRLKSNYAAYGLRTCVEAVILV 77


>ref|XP_008337783.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           5, partial [Malus domestica]
          Length = 222

 Score = 91.3 bits (225), Expect = 3e-16
 Identities = 42/58 (72%), Positives = 50/58 (86%)
 Frame = -1

Query: 174 DNQNQSHVLNIYPLSNYYFGSKDAVPFKDETLADRVLRMKSNYAAYGLRTCVQGVILV 1
           DN +QS  L+IYPLS+YYF SK+A+P KDET ADR+ R+KSNYAAYGLRTCV+ VILV
Sbjct: 21  DNDDQSRTLDIYPLSSYYFASKEAIPVKDETPADRLRRLKSNYAAYGLRTCVEAVILV 78


>ref|XP_009340472.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           5-like isoform X2 [Pyrus x bretschneideri]
          Length = 192

 Score = 90.9 bits (224), Expect = 3e-16
 Identities = 42/58 (72%), Positives = 50/58 (86%)
 Frame = -1

Query: 174 DNQNQSHVLNIYPLSNYYFGSKDAVPFKDETLADRVLRMKSNYAAYGLRTCVQGVILV 1
           DN +QS  L+IYPLS+YYF SK+A+P KDET ADR+ R+KSNYAAYGLRTCV+ VILV
Sbjct: 20  DNDDQSRTLDIYPLSSYYFASKEAIPVKDETPADRLHRLKSNYAAYGLRTCVEAVILV 77


>ref|XP_009340471.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           5-like isoform X1 [Pyrus x bretschneideri]
          Length = 221

 Score = 90.9 bits (224), Expect = 3e-16
 Identities = 42/58 (72%), Positives = 50/58 (86%)
 Frame = -1

Query: 174 DNQNQSHVLNIYPLSNYYFGSKDAVPFKDETLADRVLRMKSNYAAYGLRTCVQGVILV 1
           DN +QS  L+IYPLS+YYF SK+A+P KDET ADR+ R+KSNYAAYGLRTCV+ VILV
Sbjct: 20  DNDDQSRTLDIYPLSSYYFASKEAIPVKDETPADRLHRLKSNYAAYGLRTCVEAVILV 77


>ref|XP_008242182.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           5 [Prunus mume]
          Length = 221

 Score = 90.5 bits (223), Expect = 4e-16
 Identities = 41/58 (70%), Positives = 52/58 (89%)
 Frame = -1

Query: 174 DNQNQSHVLNIYPLSNYYFGSKDAVPFKDETLADRVLRMKSNYAAYGLRTCVQGVILV 1
           DN +QS +L+IYPLS+YYF SK+A+P KDE++ADR+ RMKS+YAAYGLRTCV+ VILV
Sbjct: 20  DNGDQSRILDIYPLSSYYFSSKEALPIKDESVADRLQRMKSSYAAYGLRTCVEAVILV 77


>ref|XP_002514092.1| pre-mRNA cleavage factor im, 25kD subunit, putative [Ricinus
           communis] gi|223546548|gb|EEF48046.1| pre-mRNA cleavage
           factor im, 25kD subunit, putative [Ricinus communis]
          Length = 214

 Score = 89.0 bits (219), Expect = 1e-15
 Identities = 41/57 (71%), Positives = 49/57 (85%)
 Frame = -1

Query: 171 NQNQSHVLNIYPLSNYYFGSKDAVPFKDETLADRVLRMKSNYAAYGLRTCVQGVILV 1
           +++Q  VL+IYPLS YYFGSKD +PF+DETL DRV RMKSNY A+GLRTCV+ VILV
Sbjct: 16  SRDQGFVLDIYPLSRYYFGSKDPLPFRDETLVDRVQRMKSNYLAHGLRTCVEAVILV 72


>ref|XP_008459551.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           5 [Cucumis melo]
          Length = 219

 Score = 87.8 bits (216), Expect = 3e-15
 Identities = 40/55 (72%), Positives = 49/55 (89%)
 Frame = -1

Query: 165 NQSHVLNIYPLSNYYFGSKDAVPFKDETLADRVLRMKSNYAAYGLRTCVQGVILV 1
           +Q   ++IYPLSNYYFGSK+ + FKDETL+DR+LRMKSNYAAYGLRTCV+ V+LV
Sbjct: 21  HQLSYIDIYPLSNYYFGSKEPLLFKDETLSDRILRMKSNYAAYGLRTCVEAVMLV 75


>ref|XP_004287592.1| PREDICTED: pre-mRNA cleavage factor Im 25 kDa subunit 1 [Fragaria
           vesca subsp. vesca]
          Length = 218

 Score = 87.8 bits (216), Expect = 3e-15
 Identities = 41/57 (71%), Positives = 48/57 (84%)
 Frame = -1

Query: 171 NQNQSHVLNIYPLSNYYFGSKDAVPFKDETLADRVLRMKSNYAAYGLRTCVQGVILV 1
           +  QS  L+IYPLS YYFGSK+A+PFKDETL DRV R+ SNYAAYGLRTCV+ V+LV
Sbjct: 18  DHTQSRQLDIYPLSCYYFGSKEAIPFKDETLDDRVQRLNSNYAAYGLRTCVEAVMLV 74


>ref|XP_006451545.1| hypothetical protein CICLE_v10009459mg [Citrus clementina]
           gi|568843220|ref|XP_006475514.1| PREDICTED: cleavage and
           polyadenylation specificity factor subunit 5-like
           isoform X1 [Citrus sinensis] gi|557554771|gb|ESR64785.1|
           hypothetical protein CICLE_v10009459mg [Citrus
           clementina] gi|641836450|gb|KDO55414.1| hypothetical
           protein CISIN_1g028063mg [Citrus sinensis]
          Length = 214

 Score = 87.4 bits (215), Expect = 4e-15
 Identities = 39/57 (68%), Positives = 50/57 (87%)
 Frame = -1

Query: 171 NQNQSHVLNIYPLSNYYFGSKDAVPFKDETLADRVLRMKSNYAAYGLRTCVQGVILV 1
           +    +V++IYPLS+YYFGSK+A+PFKDETL +RVLRMKSNY A+GLRTCV+ V+LV
Sbjct: 14  SDRNGYVVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLV 70


>ref|XP_006451544.1| hypothetical protein CICLE_v10009459mg [Citrus clementina]
           gi|557554770|gb|ESR64784.1| hypothetical protein
           CICLE_v10009459mg [Citrus clementina]
           gi|641836451|gb|KDO55415.1| hypothetical protein
           CISIN_1g028063mg [Citrus sinensis]
          Length = 196

 Score = 87.4 bits (215), Expect = 4e-15
 Identities = 39/57 (68%), Positives = 50/57 (87%)
 Frame = -1

Query: 171 NQNQSHVLNIYPLSNYYFGSKDAVPFKDETLADRVLRMKSNYAAYGLRTCVQGVILV 1
           +    +V++IYPLS+YYFGSK+A+PFKDETL +RVLRMKSNY A+GLRTCV+ V+LV
Sbjct: 14  SDRNGYVVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLV 70


>gb|KRH37446.1| hypothetical protein GLYMA_09G066700 [Glycine max]
           gi|947088782|gb|KRH37447.1| hypothetical protein
           GLYMA_09G066700 [Glycine max]
          Length = 221

 Score = 87.0 bits (214), Expect = 5e-15
 Identities = 42/57 (73%), Positives = 48/57 (84%)
 Frame = -1

Query: 171 NQNQSHVLNIYPLSNYYFGSKDAVPFKDETLADRVLRMKSNYAAYGLRTCVQGVILV 1
           N +QS   +IYPLS+YYFGSKDAVP KD TL DRVLRMKSNYAA G+RTCV+ V+LV
Sbjct: 21  NDDQSLEFDIYPLSSYYFGSKDAVPSKDLTLVDRVLRMKSNYAASGIRTCVEAVLLV 77


>gb|KRH37445.1| hypothetical protein GLYMA_09G066700 [Glycine max]
          Length = 225

 Score = 87.0 bits (214), Expect = 5e-15
 Identities = 42/57 (73%), Positives = 48/57 (84%)
 Frame = -1

Query: 171 NQNQSHVLNIYPLSNYYFGSKDAVPFKDETLADRVLRMKSNYAAYGLRTCVQGVILV 1
           N +QS   +IYPLS+YYFGSKDAVP KD TL DRVLRMKSNYAA G+RTCV+ V+LV
Sbjct: 21  NDDQSLEFDIYPLSSYYFGSKDAVPSKDLTLVDRVLRMKSNYAASGIRTCVEAVLLV 77


>emb|CDP03125.1| unnamed protein product [Coffea canephora]
          Length = 218

 Score = 87.0 bits (214), Expect = 5e-15
 Identities = 40/56 (71%), Positives = 48/56 (85%)
 Frame = -1

Query: 168 QNQSHVLNIYPLSNYYFGSKDAVPFKDETLADRVLRMKSNYAAYGLRTCVQGVILV 1
           QN  + L+IYPL+ YYFGSK+AVPFKDET +DR+LRMK NY A+GLRTCVQ V+LV
Sbjct: 19  QNYGNALDIYPLNCYYFGSKEAVPFKDETTSDRILRMKFNYDAHGLRTCVQAVMLV 74


>ref|NP_001242595.1| uncharacterized protein LOC100791216 [Glycine max]
           gi|255640824|gb|ACU20695.1| unknown [Glycine max]
          Length = 216

 Score = 87.0 bits (214), Expect = 5e-15
 Identities = 42/57 (73%), Positives = 48/57 (84%)
 Frame = -1

Query: 171 NQNQSHVLNIYPLSNYYFGSKDAVPFKDETLADRVLRMKSNYAAYGLRTCVQGVILV 1
           N +QS   +IYPLS+YYFGSKDAVP KD TL DRVLRMKSNYAA G+RTCV+ V+LV
Sbjct: 21  NDDQSLEFDIYPLSSYYFGSKDAVPSKDLTLVDRVLRMKSNYAASGIRTCVEAVLLV 77


>ref|XP_009785463.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           5 isoform X2 [Nicotiana sylvestris]
          Length = 182

 Score = 86.3 bits (212), Expect = 8e-15
 Identities = 40/55 (72%), Positives = 49/55 (89%)
 Frame = -1

Query: 165 NQSHVLNIYPLSNYYFGSKDAVPFKDETLADRVLRMKSNYAAYGLRTCVQGVILV 1
           N S+VL+IYPL++YYFGSK+A+ FK+ETLADRVLRMK NY  +GLRTCVQ V+LV
Sbjct: 23  NSSNVLDIYPLNHYYFGSKEALRFKEETLADRVLRMKLNYDTHGLRTCVQAVLLV 77


>ref|XP_009785462.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           5 isoform X1 [Nicotiana sylvestris]
          Length = 219

 Score = 86.3 bits (212), Expect = 8e-15
 Identities = 40/55 (72%), Positives = 49/55 (89%)
 Frame = -1

Query: 165 NQSHVLNIYPLSNYYFGSKDAVPFKDETLADRVLRMKSNYAAYGLRTCVQGVILV 1
           N S+VL+IYPL++YYFGSK+A+ FK+ETLADRVLRMK NY  +GLRTCVQ V+LV
Sbjct: 23  NSSNVLDIYPLNHYYFGSKEALRFKEETLADRVLRMKLNYDTHGLRTCVQAVLLV 77


>ref|XP_004141062.1| PREDICTED: pre-mRNA cleavage factor Im 25 kDa subunit 1 [Cucumis
           sativus] gi|700205403|gb|KGN60522.1| hypothetical
           protein Csa_2G000310 [Cucumis sativus]
          Length = 217

 Score = 86.3 bits (212), Expect = 8e-15
 Identities = 40/55 (72%), Positives = 49/55 (89%)
 Frame = -1

Query: 165 NQSHVLNIYPLSNYYFGSKDAVPFKDETLADRVLRMKSNYAAYGLRTCVQGVILV 1
           +Q   ++IYPLSNYYFGSK+ + FKDETL+DRVLRMKSNYAA+GLRTCV+ V+LV
Sbjct: 19  HQLSYIDIYPLSNYYFGSKEPLLFKDETLSDRVLRMKSNYAAHGLRTCVEAVMLV 73


>ref|XP_011003361.1| PREDICTED: pre-mRNA cleavage factor Im 25 kDa subunit 1 isoform X2
           [Populus euphratica]
          Length = 173

 Score = 84.3 bits (207), Expect = 3e-14
 Identities = 39/58 (67%), Positives = 48/58 (82%)
 Frame = -1

Query: 174 DNQNQSHVLNIYPLSNYYFGSKDAVPFKDETLADRVLRMKSNYAAYGLRTCVQGVILV 1
           +N +QS V+ IYPL +YYFGSKD + F+DET+ADRV RMKSN+ A GLRTCVQ V+LV
Sbjct: 11  NNNHQSTVIEIYPLGSYYFGSKDPIAFRDETVADRVQRMKSNFNARGLRTCVQAVMLV 68


Top