BLASTX nr result

ID: Cornus23_contig00020942 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00020942
         (544 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010664765.1| PREDICTED: lysine-specific histone demethyla...    60   5e-07

>ref|XP_010664765.1| PREDICTED: lysine-specific histone demethylase 1 homolog 3 [Vitis
           vinifera] gi|731429781|ref|XP_010664766.1| PREDICTED:
           lysine-specific histone demethylase 1 homolog 3 [Vitis
           vinifera]
          Length = 2126

 Score = 60.5 bits (145), Expect = 5e-07
 Identities = 55/171 (32%), Positives = 80/171 (46%), Gaps = 3/171 (1%)
 Frame = -2

Query: 504 CRRYGDNSTQDQNEYILGSGENSDHCLDENLEDSLSEFFRRAQXXXXXXXXXXXXXXXXR 325
           C+R   +S QDQ E  L   + S+H  DENLEDSLS F RRAQ                 
Sbjct: 160 CQRSEGSSLQDQKEMGLWLEKGSNHSSDENLEDSLSAFVRRAQSGLIRRSRTSCSKKKRG 219

Query: 324 ETQVLKEGSSPSSTDVSEE--FXXXXXXXXXXXXKLAQKILKSENSLCQLSDKIPIYSAP 151
             Q L++G S     VSE+               +L  + L S++SL  +SD+  +   P
Sbjct: 220 -PQGLEDGLSHRCEGVSEDSHAVVVKIPRSSSGSRLMHENLTSKDSLHPVSDRGLVDLGP 278

Query: 150 DQNNIEIPQSSIDNLGQVSDCREKDPLSSDPMQELASAP-VTDEIMRSSDN 1
           ++          D  G+V +  +K   S DP++ ++S P  TD+I RSSD+
Sbjct: 279 EKTKTVENLRPGDGSGEVFNHIKKILQSVDPIKGVSSVPGATDDISRSSDD 329


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