BLASTX nr result

ID: Cornus23_contig00020916 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00020916
         (580 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAA30522.1| ORF 143 [Glycine max] gi|734402603|gb|KHN32086.1...   162   1e-60
gb|AFK49064.1| unknown [Lotus japonicus]                              197   4e-48
ref|YP_009145083.1| ribosomal protein S12 (chloroplast) [Podococ...   151   3e-34
ref|NP_862801.1| hypothetical protein CafeCp090 [Calycanthus flo...   139   8e-31
ref|YP_358631.1| hypothetical protein PhapfoPp085 [Phalaenopsis ...   127   5e-27
ref|YP_001109550.1| hypothetical protein Poptr_cp072 [Populus tr...   115   2e-23
gb|KQJ97119.1| hypothetical protein BRADI_3g28913 [Brachypodium ...   111   2e-22
tpg|DAA60526.1| TPA: hypothetical protein ZEAMMB73_222606 [Zea m...   106   7e-21
ref|XP_002519781.1| conserved hypothetical protein [Ricinus comm...    99   2e-18
gb|AFW69302.1| hypothetical protein ZEAMMB73_079346 [Zea mays]         94   6e-17
ref|YP_001312254.1| hypothetical protein CYtaCp089 [Cycas taitun...    75   5e-15
ref|YP_007474607.1| hypothetical_protein (chloroplast) [Cycas re...    70   2e-13
gb|AFS35523.1| ribosomal protein S12, partial [Fragaria moschata]      80   7e-13
ref|XP_002894684.1| hypothetical protein ARALYDRAFT_892903 [Arab...    79   2e-12
gb|KRH54918.1| hypothetical protein GLYMA_06G218700 [Glycine max]      78   3e-12
ref|YP_009002279.1| ribosomal protein S12 (chloroplast) [Pinguic...    77   8e-12
gb|AFW59336.1| hypothetical protein ZEAMMB73_738558 [Zea mays]         75   2e-11
gb|ALN98160.1| ribosomal protein S12 (chloroplast) [Dendrobium c...    62   4e-11
ref|XP_002449659.1| hypothetical protein SORBIDRAFT_05g021128, p...    63   1e-10
ref|YP_001152253.1| ORF40x [Pinus koraiensis] gi|145048878|gb|AB...    69   2e-09

>emb|CAA30522.1| ORF 143 [Glycine max] gi|734402603|gb|KHN32086.1| Putative 8.8 kDa
           protein in rps12-tRNA-Val intergenic region [Glycine
           soja]
          Length = 143

 Score =  162 bits (409), Expect(2) = 1e-60
 Identities = 77/83 (92%), Positives = 80/83 (96%)
 Frame = -3

Query: 251 LHYFGNPRTQSYGYVKYRISNPSKKRRETDTQFKVSKQNSILDLIDTYRILWKAVFDESR 72
           LHYFGNPRTQSYGYVKYRISNPS+KR  TDTQF+VSKQNSILD+IDTYRILWKAVFDESR
Sbjct: 60  LHYFGNPRTQSYGYVKYRISNPSRKRGGTDTQFQVSKQNSILDIIDTYRILWKAVFDESR 119

Query: 71  MYGLEGDLSYLSRSTLQYGVKKP 3
           MYGLEGDLSYLSRSTLQYG KKP
Sbjct: 120 MYGLEGDLSYLSRSTLQYGAKKP 142



 Score = 98.6 bits (244), Expect(2) = 1e-60
 Identities = 51/62 (82%), Positives = 52/62 (83%)
 Frame = -1

Query: 433 MRQKIFFLKRFDSELLYVQGSILK*FQRFSLTLSVSTNNSKYFDFFRTGPGQIAMIRSTS 254
           MRQKIFFLK+FDSEL YVQG I K FQRFSLTLSVSTNNSK  DFFR GP QIAMIRST 
Sbjct: 1   MRQKIFFLKKFDSELRYVQGPIWKEFQRFSLTLSVSTNNSKCLDFFRIGPSQIAMIRSTL 60

Query: 253 FY 248
            Y
Sbjct: 61  HY 62


>gb|AFK49064.1| unknown [Lotus japonicus]
          Length = 128

 Score =  197 bits (500), Expect = 4e-48
 Identities = 105/129 (81%), Positives = 109/129 (84%)
 Frame = -3

Query: 389 IICPRFNIEIISEVFPDFVRVNKQFEILRLF*NRSGSNSNDSKHFFLHYFGNPRTQSYGY 210
           +ICPR NIE ISEVF DFVRVNKQFE+ RLF  R G +        LHYF N RTQSYGY
Sbjct: 1   MICPRSNIERISEVFLDFVRVNKQFEMPRLF--RLGPSQIAMIRSTLHYFENLRTQSYGY 58

Query: 209 VKYRISNPSKKRRETDTQFKVSKQNSILDLIDTYRILWKAVFDESRMYGLEGDLSYLSRS 30
           VKYRISNPSKKRRETDTQF+VSKQNSILDLIDTYRIL KAVFDESRMYGLEGDLSYLSRS
Sbjct: 59  VKYRISNPSKKRRETDTQFQVSKQNSILDLIDTYRILRKAVFDESRMYGLEGDLSYLSRS 118

Query: 29  TLQYGVKKP 3
           TLQYG KKP
Sbjct: 119 TLQYGAKKP 127


>ref|YP_009145083.1| ribosomal protein S12 (chloroplast) [Podococcus barteri]
           gi|836614536|ref|YP_009145127.1| ribosomal protein S12
           (chloroplast) [Podococcus barteri]
           gi|827521025|gb|AKJ85882.1| ribosomal protein S12
           (chloroplast) [Podococcus barteri]
           gi|827521026|gb|AKJ85883.1| ribosomal protein S12
           (chloroplast) [Podococcus barteri]
          Length = 121

 Score =  151 bits (381), Expect = 3e-34
 Identities = 73/77 (94%), Positives = 75/77 (97%)
 Frame = -3

Query: 233 PRTQSYGYVKYRISNPSKKRRETDTQFKVSKQNSILDLIDTYRILWKAVFDESRMYGLEG 54
           P + SYGYVKYRISNPS+KRRETDTQFKVSKQNSILDLIDTYRILWKAVFDESRMYGLEG
Sbjct: 44  PNSASYGYVKYRISNPSRKRRETDTQFKVSKQNSILDLIDTYRILWKAVFDESRMYGLEG 103

Query: 53  DLSYLSRSTLQYGVKKP 3
           DLSYLSRSTLQYGVKKP
Sbjct: 104 DLSYLSRSTLQYGVKKP 120


>ref|NP_862801.1| hypothetical protein CafeCp090 [Calycanthus floridus var. glaucus]
           gi|32480905|ref|NP_862814.1| hypothetical protein
           CafeCp092 [Calycanthus floridus var. glaucus]
           gi|75146241|sp|Q7Y618.1|YCX1_CALFG RecName:
           Full=Uncharacterized 8.8 kDa protein in rps12-tRNA-Val
           intergenic region (chloroplast) [Calycanthus floridus
           var. glaucus] gi|32399427|emb|CAD28768.1| hypothetical
           protein [Calycanthus floridus var. glaucus]
           gi|32399441|emb|CAD28782.1| hypothetical protein
           [Calycanthus floridus var. glaucus]
          Length = 75

 Score =  139 bits (351), Expect = 8e-31
 Identities = 71/75 (94%), Positives = 71/75 (94%)
 Frame = -1

Query: 433 MRQKIFFLKRFDSELLYVQGSILK*FQRFSLTLSVSTNNSKYFDFFRTGPGQIAMIRSTS 254
           MRQKIFFLKRFDSELLYVQGSILK FQRFSLTLSVSTNNSKY DFFRTGP QIA IRSTS
Sbjct: 1   MRQKIFFLKRFDSELLYVQGSILKSFQRFSLTLSVSTNNSKYLDFFRTGPSQIATIRSTS 60

Query: 253 FYTISETQGLNRMDM 209
           FYTISETQGLNRMDM
Sbjct: 61  FYTISETQGLNRMDM 75


>ref|YP_358631.1| hypothetical protein PhapfoPp085 [Phalaenopsis aphrodite subsp.
           formosana] gi|58802847|gb|AAW82567.1| hypothetical
           protein [Phalaenopsis aphrodite subsp. formosana]
          Length = 77

 Score =  127 bits (318), Expect = 5e-27
 Identities = 65/75 (86%), Positives = 67/75 (89%)
 Frame = +3

Query: 252 KEVLRIIAI*PGPVLKKSKYFELFVDTDKVRENL*NYFNIEPWTYNSSESNLFRKKIFCL 431
           KEVLRIIAI  GPVLKKS+YFELFVDTDK RENL NY NI PWTY+SSESNLFRKK FCL
Sbjct: 3   KEVLRIIAIGLGPVLKKSRYFELFVDTDKGRENLLNYSNIGPWTYSSSESNLFRKKSFCL 62

Query: 432 MVACSSPLTKLSLLG 476
           MVACSSPL KLSLLG
Sbjct: 63  MVACSSPLPKLSLLG 77


>ref|YP_001109550.1| hypothetical protein Poptr_cp072 [Populus trichocarpa]
           gi|134093268|ref|YP_001109569.1| hypothetical protein
           Poptr_cp092 [Populus trichocarpa]
           gi|133712111|gb|ABO36754.1| conserved hypothetical
           protein [Populus trichocarpa]
           gi|133712130|gb|ABO36773.1| conserved hypothetical
           protein [Populus trichocarpa]
          Length = 65

 Score =  115 bits (287), Expect = 2e-23
 Identities = 58/65 (89%), Positives = 59/65 (90%)
 Frame = -1

Query: 343 LTLSVSTNNSKYFDFFRTGPGQIAMIRSTSFYTISETQGLNRMDM*NTGFPILARKGGKR 164
           +TLSVSTNNSK  DFFR GP QIAMIRSTSFYTISETQGLNRMDM NTGFPILA KGGKR
Sbjct: 1   MTLSVSTNNSKCLDFFRAGPSQIAMIRSTSFYTISETQGLNRMDMENTGFPILAGKGGKR 60

Query: 163 ILNLK 149
           ILNLK
Sbjct: 61  ILNLK 65


>gb|KQJ97119.1| hypothetical protein BRADI_3g28913 [Brachypodium distachyon]
          Length = 84

 Score =  111 bits (278), Expect = 2e-22
 Identities = 66/95 (69%), Positives = 71/95 (74%), Gaps = 2/95 (2%)
 Frame = -1

Query: 433 MRQKIFFLKRFDSELLYVQGSILK*FQRFSLTLSVSTNNSKYFDFFRTGPGQIAMIRSTS 254
           MRQKI FLKRFDSELLY          RFSLTLSVSTNNSKY DFFRTGP  +AMIRSTS
Sbjct: 1   MRQKILFLKRFDSELLY----------RFSLTLSVSTNNSKYLDFFRTGP-SLAMIRSTS 49

Query: 253 F--YTISETQGLNRMDM*NTGFPILARKGGKRILN 155
           F    I +++  +RMDM NTGF ILA KGGKRILN
Sbjct: 50  FSITLIRKSKDSDRMDMENTGFSILAGKGGKRILN 84


>tpg|DAA60526.1| TPA: hypothetical protein ZEAMMB73_222606 [Zea mays]
          Length = 57

 Score =  106 bits (265), Expect = 7e-21
 Identities = 51/54 (94%), Positives = 52/54 (96%)
 Frame = -3

Query: 164 DTQFKVSKQNSILDLIDTYRILWKAVFDESRMYGLEGDLSYLSRSTLQYGVKKP 3
           DTQFKVSKQNSILDLID YRILWKAVFDESRMYGLEGDLSY+SRSTLQYG KKP
Sbjct: 2   DTQFKVSKQNSILDLIDPYRILWKAVFDESRMYGLEGDLSYISRSTLQYGAKKP 55


>ref|XP_002519781.1| conserved hypothetical protein [Ricinus communis]
           gi|223541020|gb|EEF42577.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 286

 Score = 98.6 bits (244), Expect = 2e-18
 Identities = 49/55 (89%), Positives = 50/55 (90%)
 Frame = +3

Query: 84  EYGFPQNSICIYEIEYGILFTHFKLSIRFPPFLARIGNPVFYISIRLSPWVSEIV 248
           EYGF QNSICIYEIEYGILFTHFKLSI  PPF ARIGNPVFYISIRLSP VS+IV
Sbjct: 232 EYGFLQNSICIYEIEYGILFTHFKLSICSPPFPARIGNPVFYISIRLSPRVSKIV 286


>gb|AFW69302.1| hypothetical protein ZEAMMB73_079346 [Zea mays]
          Length = 53

 Score = 93.6 bits (231), Expect = 6e-17
 Identities = 46/52 (88%), Positives = 46/52 (88%)
 Frame = +3

Query: 75  TFIEYGFPQNSICIYEIEYGILFTHFKLSIRFPPFLARIGNPVFYISIRLSP 230
           TFIEYGFPQNSI IYEIEYGILFTHFKLSI FPPF AR GNPVF ISIR SP
Sbjct: 2   TFIEYGFPQNSIGIYEIEYGILFTHFKLSICFPPFPARTGNPVFSISIRSSP 53


>ref|YP_001312254.1| hypothetical protein CYtaCp089 [Cycas taitungensis]
           gi|150251552|ref|YP_001312284.1| hypothetical protein
           CYtaCp120 [Cycas taitungensis]
           gi|149941571|dbj|BAF64995.1| hypothetical protein
           (chloroplast) [Cycas taitungensis]
           gi|149941602|dbj|BAF65026.1| hypothetical protein
           (chloroplast) [Cycas taitungensis]
          Length = 64

 Score = 74.7 bits (182), Expect(2) = 5e-15
 Identities = 38/50 (76%), Positives = 41/50 (82%), Gaps = 1/50 (2%)
 Frame = +2

Query: 167 FPSFSC*DWKSCILHIHTIESLGFRNSVKR-SASNHCYLTRTCSKKVEVF 313
           F  FSC DWKS ILHI TI+SLG + SVK+ S SNHCYLTRTCSKKVEVF
Sbjct: 15  FLPFSCYDWKSRILHICTIKSLGSQKSVKKKSVSNHCYLTRTCSKKVEVF 64



 Score = 33.1 bits (74), Expect(2) = 5e-15
 Identities = 15/17 (88%), Positives = 15/17 (88%)
 Frame = +3

Query: 129 YGILFTHFKLSIRFPPF 179
           Y ILFTHFKLSIRF PF
Sbjct: 2   YIILFTHFKLSIRFLPF 18


>ref|YP_007474607.1| hypothetical_protein (chloroplast) [Cycas revoluta]
           gi|372863084|gb|AEX99157.1| hypothetical_protein
           (chloroplast) [Cycas revoluta]
          Length = 60

 Score = 69.7 bits (169), Expect(2) = 2e-13
 Identities = 36/49 (73%), Positives = 38/49 (77%)
 Frame = +2

Query: 167 FPSFSC*DWKSCILHIHTIESLGFRNSVKRSASNHCYLTRTCSKKVEVF 313
           F  FSC DWKS ILHI TI+SLG + SV    SNHCYLTRTCSKKVEVF
Sbjct: 15  FLPFSCYDWKSRILHICTIKSLGSQKSV---VSNHCYLTRTCSKKVEVF 60



 Score = 33.1 bits (74), Expect(2) = 2e-13
 Identities = 15/17 (88%), Positives = 15/17 (88%)
 Frame = +3

Query: 129 YGILFTHFKLSIRFPPF 179
           Y ILFTHFKLSIRF PF
Sbjct: 2   YIILFTHFKLSIRFLPF 18


>gb|AFS35523.1| ribosomal protein S12, partial [Fragaria moschata]
          Length = 40

 Score = 80.1 bits (196), Expect = 7e-13
 Identities = 38/39 (97%), Positives = 38/39 (97%)
 Frame = -3

Query: 119 IDTYRILWKAVFDESRMYGLEGDLSYLSRSTLQYGVKKP 3
           IDTY ILWKAVFDESRMYGLEGDLSYLSRSTLQYGVKKP
Sbjct: 1   IDTYIILWKAVFDESRMYGLEGDLSYLSRSTLQYGVKKP 39


>ref|XP_002894684.1| hypothetical protein ARALYDRAFT_892903 [Arabidopsis lyrata subsp.
           lyrata] gi|297340526|gb|EFH70943.1| hypothetical protein
           ARALYDRAFT_892903 [Arabidopsis lyrata subsp. lyrata]
          Length = 60

 Score = 78.6 bits (192), Expect = 2e-12
 Identities = 39/45 (86%), Positives = 40/45 (88%)
 Frame = -1

Query: 343 LTLSVSTNNSKYFDFFRTGPGQIAMIRSTSFYTISETQGLNRMDM 209
           +TLSVSTNNSK  DFFRT P QIAMIRST FYTISETQGLNRMDM
Sbjct: 16  VTLSVSTNNSKCLDFFRTDPSQIAMIRSTYFYTISETQGLNRMDM 60


>gb|KRH54918.1| hypothetical protein GLYMA_06G218700 [Glycine max]
          Length = 87

 Score = 78.2 bits (191), Expect = 3e-12
 Identities = 40/49 (81%), Positives = 41/49 (83%)
 Frame = -1

Query: 433 MRQKIFFLKRFDSELLYVQGSILK*FQRFSLTLSVSTNNSKYFDFFRTG 287
           MRQKIFFLK+FDSEL YVQG I K FQRFS TLSVSTNNSK  DFFR G
Sbjct: 1   MRQKIFFLKKFDSELRYVQGPIWKEFQRFSWTLSVSTNNSKCLDFFRIG 49


>ref|YP_009002279.1| ribosomal protein S12 (chloroplast) [Pinguicula ehlersiae]
           gi|575882162|emb|CDL78835.1| ribosomal protein S12
           (chloroplast) [Pinguicula ehlersiae]
          Length = 156

 Score = 76.6 bits (187), Expect = 8e-12
 Identities = 53/111 (47%), Positives = 60/111 (54%)
 Frame = -3

Query: 335 VRVNKQFEILRLF*NRSGSNSNDSKHFFLHYFGNPRTQSYGYVKYRISNPSKKRRETDTQ 156
           VR+   FEI        G   N  +H  +   G  R +    V+Y I       R T   
Sbjct: 55  VRLTSGFEITAYI---PGIGHNSQEHSSVLVRGG-RVKDLPGVRYHIV------RGTLDA 104

Query: 155 FKVSKQNSILDLIDTYRILWKAVFDESRMYGLEGDLSYLSRSTLQYGVKKP 3
             V  +     +IDTYRIL KAVFDESRMYGL GDLSYLSRSTLQYGVKKP
Sbjct: 105 VGVKDRQQGRSIIDTYRILRKAVFDESRMYGLGGDLSYLSRSTLQYGVKKP 155


>gb|AFW59336.1| hypothetical protein ZEAMMB73_738558 [Zea mays]
          Length = 52

 Score = 75.1 bits (183), Expect = 2e-11
 Identities = 36/45 (80%), Positives = 39/45 (86%)
 Frame = -3

Query: 377 RFNIEIISEVFPDFVRVNKQFEILRLF*NRSGSNSNDSKHFFLHY 243
           + N+EI+SEVFP FVRVNKQFEI RLF NRS SNSNDSKHFF HY
Sbjct: 3   KVNMEILSEVFPYFVRVNKQFEIPRLFQNRSESNSNDSKHFFFHY 47


>gb|ALN98160.1| ribosomal protein S12 (chloroplast) [Dendrobium chrysotoxum]
          Length = 101

 Score = 61.6 bits (148), Expect(2) = 4e-11
 Identities = 30/34 (88%), Positives = 30/34 (88%)
 Frame = -1

Query: 352 RFSLTLSVSTNNSKYFDFFRTGPGQIAMIRSTSF 251
           RFSL LSVSTNNSKY DFFRTGP  IAMIRSTSF
Sbjct: 38  RFSLPLSVSTNNSKYLDFFRTGPSPIAMIRSTSF 71



 Score = 33.1 bits (74), Expect(2) = 4e-11
 Identities = 14/15 (93%), Positives = 14/15 (93%)
 Frame = -2

Query: 249 TLFRKPKDSIVWICK 205
           TLFRKPKDSIVWI K
Sbjct: 74  TLFRKPKDSIVWISK 88


>ref|XP_002449659.1| hypothetical protein SORBIDRAFT_05g021128, partial [Sorghum
           bicolor] gi|241935502|gb|EES08647.1| hypothetical
           protein SORBIDRAFT_05g021128, partial [Sorghum bicolor]
          Length = 67

 Score = 63.2 bits (152), Expect(2) = 1e-10
 Identities = 32/40 (80%), Positives = 34/40 (85%)
 Frame = -1

Query: 373 SILK*FQRFSLTLSVSTNNSKYFDFFRTGPGQIAMIRSTS 254
           SI K F+RFSLTLSVSTN+SKY DF R GP QIAMIRSTS
Sbjct: 9   SIWKLFERFSLTLSVSTNSSKYLDFLRIGPSQIAMIRSTS 48



 Score = 30.0 bits (66), Expect(2) = 1e-10
 Identities = 14/20 (70%), Positives = 16/20 (80%)
 Frame = -2

Query: 261 ALLFTLFRKPKDSIVWICKI 202
           +L  TLF+K KDSIVWI KI
Sbjct: 48  SLSITLFQKCKDSIVWIWKI 67


>ref|YP_001152253.1| ORF40x [Pinus koraiensis] gi|145048878|gb|ABP35493.1| ORF40x [Pinus
           koraiensis]
          Length = 40

 Score = 68.9 bits (167), Expect = 2e-09
 Identities = 30/38 (78%), Positives = 31/38 (81%)
 Frame = -1

Query: 115 IHIEFCGKPYSMKVVCTAWREIFHIFRDPPYNMG*KSQ 2
           + IE CGKPYS KVVCT WREIFH FRDPPYNM  KSQ
Sbjct: 1   MQIESCGKPYSTKVVCTVWREIFHTFRDPPYNMESKSQ 38


Top