BLASTX nr result
ID: Cornus23_contig00020916
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cornus23_contig00020916
(580 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAA30522.1| ORF 143 [Glycine max] gi|734402603|gb|KHN32086.1... 162 1e-60
gb|AFK49064.1| unknown [Lotus japonicus] 197 4e-48
ref|YP_009145083.1| ribosomal protein S12 (chloroplast) [Podococ... 151 3e-34
ref|NP_862801.1| hypothetical protein CafeCp090 [Calycanthus flo... 139 8e-31
ref|YP_358631.1| hypothetical protein PhapfoPp085 [Phalaenopsis ... 127 5e-27
ref|YP_001109550.1| hypothetical protein Poptr_cp072 [Populus tr... 115 2e-23
gb|KQJ97119.1| hypothetical protein BRADI_3g28913 [Brachypodium ... 111 2e-22
tpg|DAA60526.1| TPA: hypothetical protein ZEAMMB73_222606 [Zea m... 106 7e-21
ref|XP_002519781.1| conserved hypothetical protein [Ricinus comm... 99 2e-18
gb|AFW69302.1| hypothetical protein ZEAMMB73_079346 [Zea mays] 94 6e-17
ref|YP_001312254.1| hypothetical protein CYtaCp089 [Cycas taitun... 75 5e-15
ref|YP_007474607.1| hypothetical_protein (chloroplast) [Cycas re... 70 2e-13
gb|AFS35523.1| ribosomal protein S12, partial [Fragaria moschata] 80 7e-13
ref|XP_002894684.1| hypothetical protein ARALYDRAFT_892903 [Arab... 79 2e-12
gb|KRH54918.1| hypothetical protein GLYMA_06G218700 [Glycine max] 78 3e-12
ref|YP_009002279.1| ribosomal protein S12 (chloroplast) [Pinguic... 77 8e-12
gb|AFW59336.1| hypothetical protein ZEAMMB73_738558 [Zea mays] 75 2e-11
gb|ALN98160.1| ribosomal protein S12 (chloroplast) [Dendrobium c... 62 4e-11
ref|XP_002449659.1| hypothetical protein SORBIDRAFT_05g021128, p... 63 1e-10
ref|YP_001152253.1| ORF40x [Pinus koraiensis] gi|145048878|gb|AB... 69 2e-09
>emb|CAA30522.1| ORF 143 [Glycine max] gi|734402603|gb|KHN32086.1| Putative 8.8 kDa
protein in rps12-tRNA-Val intergenic region [Glycine
soja]
Length = 143
Score = 162 bits (409), Expect(2) = 1e-60
Identities = 77/83 (92%), Positives = 80/83 (96%)
Frame = -3
Query: 251 LHYFGNPRTQSYGYVKYRISNPSKKRRETDTQFKVSKQNSILDLIDTYRILWKAVFDESR 72
LHYFGNPRTQSYGYVKYRISNPS+KR TDTQF+VSKQNSILD+IDTYRILWKAVFDESR
Sbjct: 60 LHYFGNPRTQSYGYVKYRISNPSRKRGGTDTQFQVSKQNSILDIIDTYRILWKAVFDESR 119
Query: 71 MYGLEGDLSYLSRSTLQYGVKKP 3
MYGLEGDLSYLSRSTLQYG KKP
Sbjct: 120 MYGLEGDLSYLSRSTLQYGAKKP 142
Score = 98.6 bits (244), Expect(2) = 1e-60
Identities = 51/62 (82%), Positives = 52/62 (83%)
Frame = -1
Query: 433 MRQKIFFLKRFDSELLYVQGSILK*FQRFSLTLSVSTNNSKYFDFFRTGPGQIAMIRSTS 254
MRQKIFFLK+FDSEL YVQG I K FQRFSLTLSVSTNNSK DFFR GP QIAMIRST
Sbjct: 1 MRQKIFFLKKFDSELRYVQGPIWKEFQRFSLTLSVSTNNSKCLDFFRIGPSQIAMIRSTL 60
Query: 253 FY 248
Y
Sbjct: 61 HY 62
>gb|AFK49064.1| unknown [Lotus japonicus]
Length = 128
Score = 197 bits (500), Expect = 4e-48
Identities = 105/129 (81%), Positives = 109/129 (84%)
Frame = -3
Query: 389 IICPRFNIEIISEVFPDFVRVNKQFEILRLF*NRSGSNSNDSKHFFLHYFGNPRTQSYGY 210
+ICPR NIE ISEVF DFVRVNKQFE+ RLF R G + LHYF N RTQSYGY
Sbjct: 1 MICPRSNIERISEVFLDFVRVNKQFEMPRLF--RLGPSQIAMIRSTLHYFENLRTQSYGY 58
Query: 209 VKYRISNPSKKRRETDTQFKVSKQNSILDLIDTYRILWKAVFDESRMYGLEGDLSYLSRS 30
VKYRISNPSKKRRETDTQF+VSKQNSILDLIDTYRIL KAVFDESRMYGLEGDLSYLSRS
Sbjct: 59 VKYRISNPSKKRRETDTQFQVSKQNSILDLIDTYRILRKAVFDESRMYGLEGDLSYLSRS 118
Query: 29 TLQYGVKKP 3
TLQYG KKP
Sbjct: 119 TLQYGAKKP 127
>ref|YP_009145083.1| ribosomal protein S12 (chloroplast) [Podococcus barteri]
gi|836614536|ref|YP_009145127.1| ribosomal protein S12
(chloroplast) [Podococcus barteri]
gi|827521025|gb|AKJ85882.1| ribosomal protein S12
(chloroplast) [Podococcus barteri]
gi|827521026|gb|AKJ85883.1| ribosomal protein S12
(chloroplast) [Podococcus barteri]
Length = 121
Score = 151 bits (381), Expect = 3e-34
Identities = 73/77 (94%), Positives = 75/77 (97%)
Frame = -3
Query: 233 PRTQSYGYVKYRISNPSKKRRETDTQFKVSKQNSILDLIDTYRILWKAVFDESRMYGLEG 54
P + SYGYVKYRISNPS+KRRETDTQFKVSKQNSILDLIDTYRILWKAVFDESRMYGLEG
Sbjct: 44 PNSASYGYVKYRISNPSRKRRETDTQFKVSKQNSILDLIDTYRILWKAVFDESRMYGLEG 103
Query: 53 DLSYLSRSTLQYGVKKP 3
DLSYLSRSTLQYGVKKP
Sbjct: 104 DLSYLSRSTLQYGVKKP 120
>ref|NP_862801.1| hypothetical protein CafeCp090 [Calycanthus floridus var. glaucus]
gi|32480905|ref|NP_862814.1| hypothetical protein
CafeCp092 [Calycanthus floridus var. glaucus]
gi|75146241|sp|Q7Y618.1|YCX1_CALFG RecName:
Full=Uncharacterized 8.8 kDa protein in rps12-tRNA-Val
intergenic region (chloroplast) [Calycanthus floridus
var. glaucus] gi|32399427|emb|CAD28768.1| hypothetical
protein [Calycanthus floridus var. glaucus]
gi|32399441|emb|CAD28782.1| hypothetical protein
[Calycanthus floridus var. glaucus]
Length = 75
Score = 139 bits (351), Expect = 8e-31
Identities = 71/75 (94%), Positives = 71/75 (94%)
Frame = -1
Query: 433 MRQKIFFLKRFDSELLYVQGSILK*FQRFSLTLSVSTNNSKYFDFFRTGPGQIAMIRSTS 254
MRQKIFFLKRFDSELLYVQGSILK FQRFSLTLSVSTNNSKY DFFRTGP QIA IRSTS
Sbjct: 1 MRQKIFFLKRFDSELLYVQGSILKSFQRFSLTLSVSTNNSKYLDFFRTGPSQIATIRSTS 60
Query: 253 FYTISETQGLNRMDM 209
FYTISETQGLNRMDM
Sbjct: 61 FYTISETQGLNRMDM 75
>ref|YP_358631.1| hypothetical protein PhapfoPp085 [Phalaenopsis aphrodite subsp.
formosana] gi|58802847|gb|AAW82567.1| hypothetical
protein [Phalaenopsis aphrodite subsp. formosana]
Length = 77
Score = 127 bits (318), Expect = 5e-27
Identities = 65/75 (86%), Positives = 67/75 (89%)
Frame = +3
Query: 252 KEVLRIIAI*PGPVLKKSKYFELFVDTDKVRENL*NYFNIEPWTYNSSESNLFRKKIFCL 431
KEVLRIIAI GPVLKKS+YFELFVDTDK RENL NY NI PWTY+SSESNLFRKK FCL
Sbjct: 3 KEVLRIIAIGLGPVLKKSRYFELFVDTDKGRENLLNYSNIGPWTYSSSESNLFRKKSFCL 62
Query: 432 MVACSSPLTKLSLLG 476
MVACSSPL KLSLLG
Sbjct: 63 MVACSSPLPKLSLLG 77
>ref|YP_001109550.1| hypothetical protein Poptr_cp072 [Populus trichocarpa]
gi|134093268|ref|YP_001109569.1| hypothetical protein
Poptr_cp092 [Populus trichocarpa]
gi|133712111|gb|ABO36754.1| conserved hypothetical
protein [Populus trichocarpa]
gi|133712130|gb|ABO36773.1| conserved hypothetical
protein [Populus trichocarpa]
Length = 65
Score = 115 bits (287), Expect = 2e-23
Identities = 58/65 (89%), Positives = 59/65 (90%)
Frame = -1
Query: 343 LTLSVSTNNSKYFDFFRTGPGQIAMIRSTSFYTISETQGLNRMDM*NTGFPILARKGGKR 164
+TLSVSTNNSK DFFR GP QIAMIRSTSFYTISETQGLNRMDM NTGFPILA KGGKR
Sbjct: 1 MTLSVSTNNSKCLDFFRAGPSQIAMIRSTSFYTISETQGLNRMDMENTGFPILAGKGGKR 60
Query: 163 ILNLK 149
ILNLK
Sbjct: 61 ILNLK 65
>gb|KQJ97119.1| hypothetical protein BRADI_3g28913 [Brachypodium distachyon]
Length = 84
Score = 111 bits (278), Expect = 2e-22
Identities = 66/95 (69%), Positives = 71/95 (74%), Gaps = 2/95 (2%)
Frame = -1
Query: 433 MRQKIFFLKRFDSELLYVQGSILK*FQRFSLTLSVSTNNSKYFDFFRTGPGQIAMIRSTS 254
MRQKI FLKRFDSELLY RFSLTLSVSTNNSKY DFFRTGP +AMIRSTS
Sbjct: 1 MRQKILFLKRFDSELLY----------RFSLTLSVSTNNSKYLDFFRTGP-SLAMIRSTS 49
Query: 253 F--YTISETQGLNRMDM*NTGFPILARKGGKRILN 155
F I +++ +RMDM NTGF ILA KGGKRILN
Sbjct: 50 FSITLIRKSKDSDRMDMENTGFSILAGKGGKRILN 84
>tpg|DAA60526.1| TPA: hypothetical protein ZEAMMB73_222606 [Zea mays]
Length = 57
Score = 106 bits (265), Expect = 7e-21
Identities = 51/54 (94%), Positives = 52/54 (96%)
Frame = -3
Query: 164 DTQFKVSKQNSILDLIDTYRILWKAVFDESRMYGLEGDLSYLSRSTLQYGVKKP 3
DTQFKVSKQNSILDLID YRILWKAVFDESRMYGLEGDLSY+SRSTLQYG KKP
Sbjct: 2 DTQFKVSKQNSILDLIDPYRILWKAVFDESRMYGLEGDLSYISRSTLQYGAKKP 55
>ref|XP_002519781.1| conserved hypothetical protein [Ricinus communis]
gi|223541020|gb|EEF42577.1| conserved hypothetical
protein [Ricinus communis]
Length = 286
Score = 98.6 bits (244), Expect = 2e-18
Identities = 49/55 (89%), Positives = 50/55 (90%)
Frame = +3
Query: 84 EYGFPQNSICIYEIEYGILFTHFKLSIRFPPFLARIGNPVFYISIRLSPWVSEIV 248
EYGF QNSICIYEIEYGILFTHFKLSI PPF ARIGNPVFYISIRLSP VS+IV
Sbjct: 232 EYGFLQNSICIYEIEYGILFTHFKLSICSPPFPARIGNPVFYISIRLSPRVSKIV 286
>gb|AFW69302.1| hypothetical protein ZEAMMB73_079346 [Zea mays]
Length = 53
Score = 93.6 bits (231), Expect = 6e-17
Identities = 46/52 (88%), Positives = 46/52 (88%)
Frame = +3
Query: 75 TFIEYGFPQNSICIYEIEYGILFTHFKLSIRFPPFLARIGNPVFYISIRLSP 230
TFIEYGFPQNSI IYEIEYGILFTHFKLSI FPPF AR GNPVF ISIR SP
Sbjct: 2 TFIEYGFPQNSIGIYEIEYGILFTHFKLSICFPPFPARTGNPVFSISIRSSP 53
>ref|YP_001312254.1| hypothetical protein CYtaCp089 [Cycas taitungensis]
gi|150251552|ref|YP_001312284.1| hypothetical protein
CYtaCp120 [Cycas taitungensis]
gi|149941571|dbj|BAF64995.1| hypothetical protein
(chloroplast) [Cycas taitungensis]
gi|149941602|dbj|BAF65026.1| hypothetical protein
(chloroplast) [Cycas taitungensis]
Length = 64
Score = 74.7 bits (182), Expect(2) = 5e-15
Identities = 38/50 (76%), Positives = 41/50 (82%), Gaps = 1/50 (2%)
Frame = +2
Query: 167 FPSFSC*DWKSCILHIHTIESLGFRNSVKR-SASNHCYLTRTCSKKVEVF 313
F FSC DWKS ILHI TI+SLG + SVK+ S SNHCYLTRTCSKKVEVF
Sbjct: 15 FLPFSCYDWKSRILHICTIKSLGSQKSVKKKSVSNHCYLTRTCSKKVEVF 64
Score = 33.1 bits (74), Expect(2) = 5e-15
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = +3
Query: 129 YGILFTHFKLSIRFPPF 179
Y ILFTHFKLSIRF PF
Sbjct: 2 YIILFTHFKLSIRFLPF 18
>ref|YP_007474607.1| hypothetical_protein (chloroplast) [Cycas revoluta]
gi|372863084|gb|AEX99157.1| hypothetical_protein
(chloroplast) [Cycas revoluta]
Length = 60
Score = 69.7 bits (169), Expect(2) = 2e-13
Identities = 36/49 (73%), Positives = 38/49 (77%)
Frame = +2
Query: 167 FPSFSC*DWKSCILHIHTIESLGFRNSVKRSASNHCYLTRTCSKKVEVF 313
F FSC DWKS ILHI TI+SLG + SV SNHCYLTRTCSKKVEVF
Sbjct: 15 FLPFSCYDWKSRILHICTIKSLGSQKSV---VSNHCYLTRTCSKKVEVF 60
Score = 33.1 bits (74), Expect(2) = 2e-13
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = +3
Query: 129 YGILFTHFKLSIRFPPF 179
Y ILFTHFKLSIRF PF
Sbjct: 2 YIILFTHFKLSIRFLPF 18
>gb|AFS35523.1| ribosomal protein S12, partial [Fragaria moschata]
Length = 40
Score = 80.1 bits (196), Expect = 7e-13
Identities = 38/39 (97%), Positives = 38/39 (97%)
Frame = -3
Query: 119 IDTYRILWKAVFDESRMYGLEGDLSYLSRSTLQYGVKKP 3
IDTY ILWKAVFDESRMYGLEGDLSYLSRSTLQYGVKKP
Sbjct: 1 IDTYIILWKAVFDESRMYGLEGDLSYLSRSTLQYGVKKP 39
>ref|XP_002894684.1| hypothetical protein ARALYDRAFT_892903 [Arabidopsis lyrata subsp.
lyrata] gi|297340526|gb|EFH70943.1| hypothetical protein
ARALYDRAFT_892903 [Arabidopsis lyrata subsp. lyrata]
Length = 60
Score = 78.6 bits (192), Expect = 2e-12
Identities = 39/45 (86%), Positives = 40/45 (88%)
Frame = -1
Query: 343 LTLSVSTNNSKYFDFFRTGPGQIAMIRSTSFYTISETQGLNRMDM 209
+TLSVSTNNSK DFFRT P QIAMIRST FYTISETQGLNRMDM
Sbjct: 16 VTLSVSTNNSKCLDFFRTDPSQIAMIRSTYFYTISETQGLNRMDM 60
>gb|KRH54918.1| hypothetical protein GLYMA_06G218700 [Glycine max]
Length = 87
Score = 78.2 bits (191), Expect = 3e-12
Identities = 40/49 (81%), Positives = 41/49 (83%)
Frame = -1
Query: 433 MRQKIFFLKRFDSELLYVQGSILK*FQRFSLTLSVSTNNSKYFDFFRTG 287
MRQKIFFLK+FDSEL YVQG I K FQRFS TLSVSTNNSK DFFR G
Sbjct: 1 MRQKIFFLKKFDSELRYVQGPIWKEFQRFSWTLSVSTNNSKCLDFFRIG 49
>ref|YP_009002279.1| ribosomal protein S12 (chloroplast) [Pinguicula ehlersiae]
gi|575882162|emb|CDL78835.1| ribosomal protein S12
(chloroplast) [Pinguicula ehlersiae]
Length = 156
Score = 76.6 bits (187), Expect = 8e-12
Identities = 53/111 (47%), Positives = 60/111 (54%)
Frame = -3
Query: 335 VRVNKQFEILRLF*NRSGSNSNDSKHFFLHYFGNPRTQSYGYVKYRISNPSKKRRETDTQ 156
VR+ FEI G N +H + G R + V+Y I R T
Sbjct: 55 VRLTSGFEITAYI---PGIGHNSQEHSSVLVRGG-RVKDLPGVRYHIV------RGTLDA 104
Query: 155 FKVSKQNSILDLIDTYRILWKAVFDESRMYGLEGDLSYLSRSTLQYGVKKP 3
V + +IDTYRIL KAVFDESRMYGL GDLSYLSRSTLQYGVKKP
Sbjct: 105 VGVKDRQQGRSIIDTYRILRKAVFDESRMYGLGGDLSYLSRSTLQYGVKKP 155
>gb|AFW59336.1| hypothetical protein ZEAMMB73_738558 [Zea mays]
Length = 52
Score = 75.1 bits (183), Expect = 2e-11
Identities = 36/45 (80%), Positives = 39/45 (86%)
Frame = -3
Query: 377 RFNIEIISEVFPDFVRVNKQFEILRLF*NRSGSNSNDSKHFFLHY 243
+ N+EI+SEVFP FVRVNKQFEI RLF NRS SNSNDSKHFF HY
Sbjct: 3 KVNMEILSEVFPYFVRVNKQFEIPRLFQNRSESNSNDSKHFFFHY 47
>gb|ALN98160.1| ribosomal protein S12 (chloroplast) [Dendrobium chrysotoxum]
Length = 101
Score = 61.6 bits (148), Expect(2) = 4e-11
Identities = 30/34 (88%), Positives = 30/34 (88%)
Frame = -1
Query: 352 RFSLTLSVSTNNSKYFDFFRTGPGQIAMIRSTSF 251
RFSL LSVSTNNSKY DFFRTGP IAMIRSTSF
Sbjct: 38 RFSLPLSVSTNNSKYLDFFRTGPSPIAMIRSTSF 71
Score = 33.1 bits (74), Expect(2) = 4e-11
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = -2
Query: 249 TLFRKPKDSIVWICK 205
TLFRKPKDSIVWI K
Sbjct: 74 TLFRKPKDSIVWISK 88
>ref|XP_002449659.1| hypothetical protein SORBIDRAFT_05g021128, partial [Sorghum
bicolor] gi|241935502|gb|EES08647.1| hypothetical
protein SORBIDRAFT_05g021128, partial [Sorghum bicolor]
Length = 67
Score = 63.2 bits (152), Expect(2) = 1e-10
Identities = 32/40 (80%), Positives = 34/40 (85%)
Frame = -1
Query: 373 SILK*FQRFSLTLSVSTNNSKYFDFFRTGPGQIAMIRSTS 254
SI K F+RFSLTLSVSTN+SKY DF R GP QIAMIRSTS
Sbjct: 9 SIWKLFERFSLTLSVSTNSSKYLDFLRIGPSQIAMIRSTS 48
Score = 30.0 bits (66), Expect(2) = 1e-10
Identities = 14/20 (70%), Positives = 16/20 (80%)
Frame = -2
Query: 261 ALLFTLFRKPKDSIVWICKI 202
+L TLF+K KDSIVWI KI
Sbjct: 48 SLSITLFQKCKDSIVWIWKI 67
>ref|YP_001152253.1| ORF40x [Pinus koraiensis] gi|145048878|gb|ABP35493.1| ORF40x [Pinus
koraiensis]
Length = 40
Score = 68.9 bits (167), Expect = 2e-09
Identities = 30/38 (78%), Positives = 31/38 (81%)
Frame = -1
Query: 115 IHIEFCGKPYSMKVVCTAWREIFHIFRDPPYNMG*KSQ 2
+ IE CGKPYS KVVCT WREIFH FRDPPYNM KSQ
Sbjct: 1 MQIESCGKPYSTKVVCTVWREIFHTFRDPPYNMESKSQ 38