BLASTX nr result

ID: Cornus23_contig00020616 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00020616
         (1375 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010661376.1| PREDICTED: DNA-directed RNA polymerase IV su...   478   e-132
ref|XP_010661369.1| PREDICTED: DNA-directed RNA polymerase IV su...   478   e-132
ref|XP_010661365.1| PREDICTED: DNA-directed RNA polymerase IV su...   478   e-132
emb|CDP09818.1| unnamed protein product [Coffea canephora]            472   e-130
emb|CBI34757.3| unnamed protein product [Vitis vinifera]              470   e-129
ref|XP_007040111.1| DNA-directed RNA polymerase II subunit RPB1-...   446   e-122
ref|XP_010053343.1| PREDICTED: DNA-directed RNA polymerase IV su...   439   e-120
ref|XP_009593318.1| PREDICTED: DNA-directed RNA polymerase IV su...   424   e-116
ref|XP_009593317.1| PREDICTED: DNA-directed RNA polymerase IV su...   424   e-116
ref|XP_009797468.1| PREDICTED: DNA-directed RNA polymerase IV su...   423   e-115
ref|XP_009797463.1| PREDICTED: DNA-directed RNA polymerase IV su...   423   e-115
ref|XP_007210915.1| hypothetical protein PRUPE_ppa000278mg [Prun...   421   e-114
ref|XP_012488706.1| PREDICTED: DNA-directed RNA polymerase IV su...   420   e-114
gb|KJB39621.1| hypothetical protein B456_007G022200 [Gossypium r...   420   e-114
ref|XP_006358859.1| PREDICTED: DNA-directed RNA polymerase IV su...   416   e-113
ref|XP_006358858.1| PREDICTED: DNA-directed RNA polymerase IV su...   416   e-113
ref|XP_011650451.1| PREDICTED: DNA-directed RNA polymerase IV su...   415   e-113
ref|XP_011650450.1| PREDICTED: DNA-directed RNA polymerase IV su...   415   e-113
ref|XP_011650447.1| PREDICTED: DNA-directed RNA polymerase IV su...   415   e-113
ref|XP_008448971.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   415   e-113

>ref|XP_010661376.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X3 [Vitis
            vinifera]
          Length = 1354

 Score =  478 bits (1230), Expect = e-132
 Identities = 234/360 (65%), Positives = 280/360 (77%), Gaps = 1/360 (0%)
 Frame = -2

Query: 1374 DILWKDQPNVSRSHFSSSGELYLRVFMSENCDRTKFWSVLMNNCLQIMDMIDWDRSHPDD 1195
            DILW D P+ S    SSSG LYLRV++S +C +  FW VLM+ CLQIMDMIDW+RSHPD+
Sbjct: 991  DILWNDNPD-SDVLKSSSGRLYLRVYVSGDCGKKNFWGVLMDACLQIMDMIDWERSHPDN 1049

Query: 1194 IRDVSSAYGIDVAWKCFLSSLKFAISDTGKCILSEHLILAADCLSATGEFVALNAKGLAQ 1015
            I D+   YGID  WK FL+SLK AISD GK +L EHL+L A CLSATGEFV LNAKG+A+
Sbjct: 1050 IHDIFVVYGIDAGWKYFLNSLKSAISDIGKTVLPEHLLLVASCLSATGEFVGLNAKGMAR 1109

Query: 1014 QRKQTSVSSPFAQACFSNPGDCFIKASKMGVVDNLEGSIDALSWGMIPSIGTGGQFDMLY 835
            Q++ TS+SSPF Q CFS+PG CFIKA K  V DNL GS+DAL+WG IPS+G+GG FD+LY
Sbjct: 1110 QKELTSISSPFMQGCFSSPGSCFIKAGKRAVADNLHGSLDALAWGKIPSVGSGGHFDILY 1169

Query: 834  SPKGHELANPVEVYDLLGSQIGSLEQNVKIKAPSWHDRMSNKCHTQPLCSYGDIAAKGRK 655
            S KGHELA P ++Y LLGSQ    EQN+K+K P    + + KC  Q + + GD A+KG K
Sbjct: 1170 SAKGHELARPEDIYKLLGSQTSCHEQNLKVKVPITCYQTTTKCGAQLVYANGDSASKGCK 1229

Query: 654  NLE-ISLTKLRSVFTLKDIQKLSQELKYMLRKYPVNHQLSDVDKSIAMMALYFHPRRIEK 478
            +LE IS + LRS  +L DIQKLS+ LK++L+KYP+NHQLS++DK+  MMALYFHPRR EK
Sbjct: 1230 SLEKISKSVLRSFLSLNDIQKLSRRLKFILQKYPINHQLSEIDKTTLMMALYFHPRRDEK 1289

Query: 477  IGTGFQEIKVGYHSKHENTRCFMLVRTDGTVEDFSYHKCVHGALEIIAPHRAKAYQSRWL 298
            IG G Q IKV YHSK+ NTRCF LVRTDGT EDFSYHKCVHGALEII P RA++YQSRWL
Sbjct: 1290 IGPGAQNIKVRYHSKYHNTRCFSLVRTDGTEEDFSYHKCVHGALEIIDPRRARSYQSRWL 1349


>ref|XP_010661369.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X2 [Vitis
            vinifera]
          Length = 1458

 Score =  478 bits (1230), Expect = e-132
 Identities = 234/360 (65%), Positives = 280/360 (77%), Gaps = 1/360 (0%)
 Frame = -2

Query: 1374 DILWKDQPNVSRSHFSSSGELYLRVFMSENCDRTKFWSVLMNNCLQIMDMIDWDRSHPDD 1195
            DILW D P+ S    SSSG LYLRV++S +C +  FW VLM+ CLQIMDMIDW+RSHPD+
Sbjct: 1095 DILWNDNPD-SDVLKSSSGRLYLRVYVSGDCGKKNFWGVLMDACLQIMDMIDWERSHPDN 1153

Query: 1194 IRDVSSAYGIDVAWKCFLSSLKFAISDTGKCILSEHLILAADCLSATGEFVALNAKGLAQ 1015
            I D+   YGID  WK FL+SLK AISD GK +L EHL+L A CLSATGEFV LNAKG+A+
Sbjct: 1154 IHDIFVVYGIDAGWKYFLNSLKSAISDIGKTVLPEHLLLVASCLSATGEFVGLNAKGMAR 1213

Query: 1014 QRKQTSVSSPFAQACFSNPGDCFIKASKMGVVDNLEGSIDALSWGMIPSIGTGGQFDMLY 835
            Q++ TS+SSPF Q CFS+PG CFIKA K  V DNL GS+DAL+WG IPS+G+GG FD+LY
Sbjct: 1214 QKELTSISSPFMQGCFSSPGSCFIKAGKRAVADNLHGSLDALAWGKIPSVGSGGHFDILY 1273

Query: 834  SPKGHELANPVEVYDLLGSQIGSLEQNVKIKAPSWHDRMSNKCHTQPLCSYGDIAAKGRK 655
            S KGHELA P ++Y LLGSQ    EQN+K+K P    + + KC  Q + + GD A+KG K
Sbjct: 1274 SAKGHELARPEDIYKLLGSQTSCHEQNLKVKVPITCYQTTTKCGAQLVYANGDSASKGCK 1333

Query: 654  NLE-ISLTKLRSVFTLKDIQKLSQELKYMLRKYPVNHQLSDVDKSIAMMALYFHPRRIEK 478
            +LE IS + LRS  +L DIQKLS+ LK++L+KYP+NHQLS++DK+  MMALYFHPRR EK
Sbjct: 1334 SLEKISKSVLRSFLSLNDIQKLSRRLKFILQKYPINHQLSEIDKTTLMMALYFHPRRDEK 1393

Query: 477  IGTGFQEIKVGYHSKHENTRCFMLVRTDGTVEDFSYHKCVHGALEIIAPHRAKAYQSRWL 298
            IG G Q IKV YHSK+ NTRCF LVRTDGT EDFSYHKCVHGALEII P RA++YQSRWL
Sbjct: 1394 IGPGAQNIKVRYHSKYHNTRCFSLVRTDGTEEDFSYHKCVHGALEIIDPRRARSYQSRWL 1453


>ref|XP_010661365.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X1 [Vitis
            vinifera]
          Length = 1460

 Score =  478 bits (1230), Expect = e-132
 Identities = 234/360 (65%), Positives = 280/360 (77%), Gaps = 1/360 (0%)
 Frame = -2

Query: 1374 DILWKDQPNVSRSHFSSSGELYLRVFMSENCDRTKFWSVLMNNCLQIMDMIDWDRSHPDD 1195
            DILW D P+ S    SSSG LYLRV++S +C +  FW VLM+ CLQIMDMIDW+RSHPD+
Sbjct: 1097 DILWNDNPD-SDVLKSSSGRLYLRVYVSGDCGKKNFWGVLMDACLQIMDMIDWERSHPDN 1155

Query: 1194 IRDVSSAYGIDVAWKCFLSSLKFAISDTGKCILSEHLILAADCLSATGEFVALNAKGLAQ 1015
            I D+   YGID  WK FL+SLK AISD GK +L EHL+L A CLSATGEFV LNAKG+A+
Sbjct: 1156 IHDIFVVYGIDAGWKYFLNSLKSAISDIGKTVLPEHLLLVASCLSATGEFVGLNAKGMAR 1215

Query: 1014 QRKQTSVSSPFAQACFSNPGDCFIKASKMGVVDNLEGSIDALSWGMIPSIGTGGQFDMLY 835
            Q++ TS+SSPF Q CFS+PG CFIKA K  V DNL GS+DAL+WG IPS+G+GG FD+LY
Sbjct: 1216 QKELTSISSPFMQGCFSSPGSCFIKAGKRAVADNLHGSLDALAWGKIPSVGSGGHFDILY 1275

Query: 834  SPKGHELANPVEVYDLLGSQIGSLEQNVKIKAPSWHDRMSNKCHTQPLCSYGDIAAKGRK 655
            S KGHELA P ++Y LLGSQ    EQN+K+K P    + + KC  Q + + GD A+KG K
Sbjct: 1276 SAKGHELARPEDIYKLLGSQTSCHEQNLKVKVPITCYQTTTKCGAQLVYANGDSASKGCK 1335

Query: 654  NLE-ISLTKLRSVFTLKDIQKLSQELKYMLRKYPVNHQLSDVDKSIAMMALYFHPRRIEK 478
            +LE IS + LRS  +L DIQKLS+ LK++L+KYP+NHQLS++DK+  MMALYFHPRR EK
Sbjct: 1336 SLEKISKSVLRSFLSLNDIQKLSRRLKFILQKYPINHQLSEIDKTTLMMALYFHPRRDEK 1395

Query: 477  IGTGFQEIKVGYHSKHENTRCFMLVRTDGTVEDFSYHKCVHGALEIIAPHRAKAYQSRWL 298
            IG G Q IKV YHSK+ NTRCF LVRTDGT EDFSYHKCVHGALEII P RA++YQSRWL
Sbjct: 1396 IGPGAQNIKVRYHSKYHNTRCFSLVRTDGTEEDFSYHKCVHGALEIIDPRRARSYQSRWL 1455


>emb|CDP09818.1| unnamed protein product [Coffea canephora]
          Length = 1511

 Score =  472 bits (1215), Expect = e-130
 Identities = 233/360 (64%), Positives = 284/360 (78%)
 Frame = -2

Query: 1374 DILWKDQPNVSRSHFSSSGELYLRVFMSENCDRTKFWSVLMNNCLQIMDMIDWDRSHPDD 1195
            DI+WKD  N S+S   S G +YLRVFMSE CDRTKFWSVL++NCL+I D+IDW+RSHPDD
Sbjct: 1141 DIMWKDCRNSSKSSKGSLGGVYLRVFMSEKCDRTKFWSVLVDNCLRIRDLIDWERSHPDD 1200

Query: 1194 IRDVSSAYGIDVAWKCFLSSLKFAISDTGKCILSEHLILAADCLSATGEFVALNAKGLAQ 1015
            I D++ AYGID A   FLSSL  AISDTGK IL EHL+L ADCLSATGEFVALNAKGLAQ
Sbjct: 1201 IHDMAPAYGIDAAVNHFLSSLNSAISDTGKTILPEHLVLTADCLSATGEFVALNAKGLAQ 1260

Query: 1014 QRKQTSVSSPFAQACFSNPGDCFIKASKMGVVDNLEGSIDALSWGMIPSIGTGGQFDMLY 835
            QRK+T+VSSPF QACFS+PGDCF++A+K G+VDNL+G++DAL+WGM+PSIGTG +FD++Y
Sbjct: 1261 QRKETAVSSPFLQACFSSPGDCFVRAAKTGIVDNLQGTVDALAWGMVPSIGTGARFDIIY 1320

Query: 834  SPKGHELANPVEVYDLLGSQIGSLEQNVKIKAPSWHDRMSNKCHTQPLCSYGDIAAKGRK 655
            S KGHE A  ++VYDLLGS +     N ++K P+    MS K   Q L +Y D+A KG  
Sbjct: 1321 SGKGHEPAKSIDVYDLLGSIV---NLNQQVKFPNKDYEMSGKSIVQHLFAYDDLATKG-- 1375

Query: 654  NLEISLTKLRSVFTLKDIQKLSQELKYMLRKYPVNHQLSDVDKSIAMMALYFHPRRIEKI 475
               +  T LR+ F+LKDIQKLS  LK+ML KY V+ QLS++DK+I M AL FHPR  EKI
Sbjct: 1376 -CILPRTLLRNFFSLKDIQKLSHSLKHMLNKYDVDCQLSEIDKTIVMAALSFHPRSSEKI 1434

Query: 474  GTGFQEIKVGYHSKHENTRCFMLVRTDGTVEDFSYHKCVHGALEIIAPHRAKAYQSRWLN 295
            G G  EIKVGYHS+++N+RCF+LVR DGTV DFSYHKCVH AL++IAP  AK Y+S+WLN
Sbjct: 1435 GIGAHEIKVGYHSEYDNSRCFVLVRKDGTVADFSYHKCVHNALQLIAPDWAKKYESKWLN 1494


>emb|CBI34757.3| unnamed protein product [Vitis vinifera]
          Length = 1359

 Score =  470 bits (1210), Expect = e-129
 Identities = 229/354 (64%), Positives = 276/354 (77%), Gaps = 1/354 (0%)
 Frame = -2

Query: 1329 SSSGELYLRVFMSENCDRTKFWSVLMNNCLQIMDMIDWDRSHPDDIRDVSSAYGIDVAWK 1150
            SSSG LYLRV++S +C +  FW VLM+ CLQIMDMIDW+RSHPD+I D+   YGID  WK
Sbjct: 1000 SSSGRLYLRVYVSGDCGKKNFWGVLMDACLQIMDMIDWERSHPDNIHDIFVVYGIDAGWK 1059

Query: 1149 CFLSSLKFAISDTGKCILSEHLILAADCLSATGEFVALNAKGLAQQRKQTSVSSPFAQAC 970
             FL+SLK AISD GK +L EHL+L A CLSATGEFV LNAKG+A+Q++ TS+SSPF Q C
Sbjct: 1060 YFLNSLKSAISDIGKTVLPEHLLLVASCLSATGEFVGLNAKGMARQKELTSISSPFMQGC 1119

Query: 969  FSNPGDCFIKASKMGVVDNLEGSIDALSWGMIPSIGTGGQFDMLYSPKGHELANPVEVYD 790
            FS+PG CFIKA K  V DNL GS+DAL+WG IPS+G+GG FD+LYS KGHELA P ++Y 
Sbjct: 1120 FSSPGSCFIKAGKRAVADNLHGSLDALAWGKIPSVGSGGHFDILYSAKGHELARPEDIYK 1179

Query: 789  LLGSQIGSLEQNVKIKAPSWHDRMSNKCHTQPLCSYGDIAAKGRKNLE-ISLTKLRSVFT 613
            LLGSQ    EQN+K+K P    + + KC  Q + + GD A+KG K+LE IS + LRS  +
Sbjct: 1180 LLGSQTSCHEQNLKVKVPITCYQTTTKCGAQLVYANGDSASKGCKSLEKISKSVLRSFLS 1239

Query: 612  LKDIQKLSQELKYMLRKYPVNHQLSDVDKSIAMMALYFHPRRIEKIGTGFQEIKVGYHSK 433
            L DIQKLS+ LK++L+KYP+NHQLS++DK+  MMALYFHPRR EKIG G Q IKV YHSK
Sbjct: 1240 LNDIQKLSRRLKFILQKYPINHQLSEIDKTTLMMALYFHPRRDEKIGPGAQNIKVRYHSK 1299

Query: 432  HENTRCFMLVRTDGTVEDFSYHKCVHGALEIIAPHRAKAYQSRWLNETM*SNLH 271
            + NTRCF LVRTDGT EDFSYHKCVHGALEII P RA++YQSRWL  +   NL+
Sbjct: 1300 YHNTRCFSLVRTDGTEEDFSYHKCVHGALEIIDPRRARSYQSRWLPYSEVLNLY 1353


>ref|XP_007040111.1| DNA-directed RNA polymerase II subunit RPB1-B, putative [Theobroma
            cacao] gi|508777356|gb|EOY24612.1| DNA-directed RNA
            polymerase II subunit RPB1-B, putative [Theobroma cacao]
          Length = 1484

 Score =  446 bits (1147), Expect = e-122
 Identities = 221/360 (61%), Positives = 273/360 (75%), Gaps = 1/360 (0%)
 Frame = -2

Query: 1374 DILWKDQPNVSRSHFSSSGELYLRVFMSENCDRTKFWSVLMNNCLQIMDMIDWDRSHPDD 1195
            DILWKD+  VS+ H SS GELYLRVF+S +   TK W VLMN+CLQIMDMIDW RSHPD+
Sbjct: 1120 DILWKDRLKVSKPHKSSCGELYLRVFVSGDFGITKLWGVLMNDCLQIMDMIDWTRSHPDN 1179

Query: 1194 IRDVSSAYGIDVAWKCFLSSLKFAISDTGKCILSEHLILAADCLSATGEFVALNAKGLAQ 1015
            I  +  AYGID  WK FL++LK AISDTGK IL+EHL++ A+CLSATGEFV LN+KGL Q
Sbjct: 1180 INQLCLAYGIDAGWKFFLNNLKSAISDTGKTILNEHLLVVANCLSATGEFVGLNSKGLRQ 1239

Query: 1014 QRKQTSVSSPFAQACFSNPGDCFIKASKMGVVDNLEGSIDALSWGMIPSIGTGGQFDMLY 835
            QR+   VSSPF QACFSNP   F+KA+K G  D+L+G+IDAL+WG IP IGTGGQFD++Y
Sbjct: 1240 QREHAYVSSPFMQACFSNPSASFVKAAKTGASDDLQGTIDALAWGRIPHIGTGGQFDIIY 1299

Query: 834  SPKGHELANPVEVYDLLGSQIGSLEQNVKIKAPSWHDRMSNKCHTQPLCSYGDIAAKGRK 655
            S K   LA PV+VY LLGS I S +Q+V+ + P   +  S K  +  + + GD A++  K
Sbjct: 1300 SVKDQRLAEPVDVYKLLGSSISSQKQDVEFEVPKALNFKSEKYGSLLIDALGDSASEELK 1359

Query: 654  NLEISLTKL-RSVFTLKDIQKLSQELKYMLRKYPVNHQLSDVDKSIAMMALYFHPRRIEK 478
             +E     + R + TL DIQ+LS+ L+ +L KYP++H+LS+ D +  MMALYFHPRR EK
Sbjct: 1360 KIETKRRSIWRELLTLDDIQRLSRALRNILHKYPIDHRLSEADWNTLMMALYFHPRRDEK 1419

Query: 477  IGTGFQEIKVGYHSKHENTRCFMLVRTDGTVEDFSYHKCVHGALEIIAPHRAKAYQSRWL 298
            IG+G QEIKVGYH +H N RCF LVRTDGT+ DFSYHKCV GALEIIAPHRAK+Y+S+WL
Sbjct: 1420 IGSGAQEIKVGYHPEHANARCFSLVRTDGTIVDFSYHKCVLGALEIIAPHRAKSYKSKWL 1479


>ref|XP_010053343.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 [Eucalyptus
            grandis] gi|702324654|ref|XP_010053344.1| PREDICTED:
            DNA-directed RNA polymerase IV subunit 1 [Eucalyptus
            grandis] gi|702324662|ref|XP_010053345.1| PREDICTED:
            DNA-directed RNA polymerase IV subunit 1 [Eucalyptus
            grandis] gi|702324668|ref|XP_010053346.1| PREDICTED:
            DNA-directed RNA polymerase IV subunit 1 [Eucalyptus
            grandis] gi|702324674|ref|XP_010053347.1| PREDICTED:
            DNA-directed RNA polymerase IV subunit 1 [Eucalyptus
            grandis] gi|702324680|ref|XP_010053348.1| PREDICTED:
            DNA-directed RNA polymerase IV subunit 1 [Eucalyptus
            grandis] gi|702324687|ref|XP_010053349.1| PREDICTED:
            DNA-directed RNA polymerase IV subunit 1 [Eucalyptus
            grandis] gi|629112658|gb|KCW77618.1| hypothetical protein
            EUGRSUZ_D01929 [Eucalyptus grandis]
          Length = 1473

 Score =  439 bits (1130), Expect = e-120
 Identities = 212/359 (59%), Positives = 271/359 (75%)
 Frame = -2

Query: 1374 DILWKDQPNVSRSHFSSSGELYLRVFMSENCDRTKFWSVLMNNCLQIMDMIDWDRSHPDD 1195
            DILW +   +S+S   S+GELYLRV MS + ++ K WSVLMNNC+ IMD IDW RSHPD+
Sbjct: 1110 DILWSESGKLSKSKPVSTGELYLRVSMSAHSEKMKLWSVLMNNCVPIMDAIDWSRSHPDN 1169

Query: 1194 IRDVSSAYGIDVAWKCFLSSLKFAISDTGKCILSEHLILAADCLSATGEFVALNAKGLAQ 1015
            IR+ S A GID  WK FL+SL  A+SDTGK +L EHL+L A+CLS +GEFV LN KG+++
Sbjct: 1170 IREFSLANGIDAGWKYFLNSLGSAVSDTGKTVLPEHLVLLANCLSTSGEFVGLNPKGMSR 1229

Query: 1014 QRKQTSVSSPFAQACFSNPGDCFIKASKMGVVDNLEGSIDALSWGMIPSIGTGGQFDMLY 835
            QR+ +SV+SPF QACFSNPG CFIKA+K G VD+L+GS+DAL+WG +PS+GTGG F+++Y
Sbjct: 1230 QREISSVASPFVQACFSNPGPCFIKAAKAGTVDSLQGSLDALAWGKVPSLGTGGLFEIIY 1289

Query: 834  SPKGHELANPVEVYDLLGSQIGSLEQNVKIKAPSWHDRMSNKCHTQPLCSYGDIAAKGRK 655
            S KGHELA P  VY+LLG+++ S +QN+K++ P+    + + C  + +    D  +K  K
Sbjct: 1290 SGKGHELAKPESVYNLLGNKVSSTQQNIKLEVPNAGSHVPDTCGAEFV--QADSVSKVLK 1347

Query: 654  NLEISLTKLRSVFTLKDIQKLSQELKYMLRKYPVNHQLSDVDKSIAMMALYFHPRRIEKI 475
             LEI+ +  R   T  DIQKLS ELK +L KYP++H L + +KSI MMAL FHPR  EKI
Sbjct: 1348 KLEINKSLFRKFITFNDIQKLSLELKKILYKYPIDHHLGEQEKSIVMMALKFHPRGKEKI 1407

Query: 474  GTGFQEIKVGYHSKHENTRCFMLVRTDGTVEDFSYHKCVHGALEIIAPHRAKAYQSRWL 298
            GTG + IKVG+H KH+++RCFMLVR DG  EDFSYHKCV GALEIIAP RAK YQS+WL
Sbjct: 1408 GTGARNIKVGHHPKHQDSRCFMLVRDDGMAEDFSYHKCVLGALEIIAPQRAKTYQSKWL 1466


>ref|XP_009593318.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X2
            [Nicotiana tomentosiformis]
          Length = 1211

 Score =  424 bits (1090), Expect = e-116
 Identities = 206/360 (57%), Positives = 271/360 (75%)
 Frame = -2

Query: 1374 DILWKDQPNVSRSHFSSSGELYLRVFMSENCDRTKFWSVLMNNCLQIMDMIDWDRSHPDD 1195
            DILW++ P+ S+S   S+GELYL+VFMSE+CDR  FW+ L+++CL IMD+IDW++SHPD+
Sbjct: 840  DILWRELPSTSKSSRGSTGELYLQVFMSESCDRNNFWNALVDSCLHIMDLIDWEQSHPDN 899

Query: 1194 IRDVSSAYGIDVAWKCFLSSLKFAISDTGKCILSEHLILAADCLSATGEFVALNAKGLAQ 1015
            + D++ AYG+DVAWK FL +L  A+S+TGK IL EHL+LAADCL+ATGEFV LN KGLAQ
Sbjct: 900  VHDLTVAYGVDVAWKYFLRNLNSAVSETGKKILLEHLVLAADCLTATGEFVPLNTKGLAQ 959

Query: 1014 QRKQTSVSSPFAQACFSNPGDCFIKASKMGVVDNLEGSIDALSWGMIPSIGTGGQFDMLY 835
            QRK   V SPF QACFS+PGD F++A+K  + D+L+GS++AL+WG  PS GTG  FD++Y
Sbjct: 960  QRKCAGVISPFMQACFSHPGDSFVRAAKTELSDDLQGSLEALAWGKTPSTGTGFSFDIIY 1019

Query: 834  SPKGHELANPVEVYDLLGSQIGSLEQNVKIKAPSWHDRMSNKCHTQPLCSYGDIAAKGRK 655
            S KG+E A P +VY LLG+ + S  Q VK+      +  ++K   + LC   D+  K  K
Sbjct: 1020 SGKGYEPAAPTDVYALLGNHVTSNRQQVKVTLDE-DNETADKALARRLCKLDDLNTKRCK 1078

Query: 654  NLEISLTKLRSVFTLKDIQKLSQELKYMLRKYPVNHQLSDVDKSIAMMALYFHPRRIEKI 475
            + + S+  LRS  +  DI+KLSQ LK ML KY ++ +LS+ DKSI MMAL+FHPRR EKI
Sbjct: 1079 S-QWSIANLRSFLSFNDIKKLSQALKQMLSKYAIDRELSEADKSIVMMALHFHPRRSEKI 1137

Query: 474  GTGFQEIKVGYHSKHENTRCFMLVRTDGTVEDFSYHKCVHGALEIIAPHRAKAYQSRWLN 295
            G G  EIK+GYH ++E++RCFMLVRTDGTVEDFSY KC+  ALE+IAP +AK Y  +WLN
Sbjct: 1138 GKGAMEIKIGYHKEYEDSRCFMLVRTDGTVEDFSYRKCLQHALELIAPQKAKTY--KWLN 1195


>ref|XP_009593317.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X1
            [Nicotiana tomentosiformis]
          Length = 1447

 Score =  424 bits (1090), Expect = e-116
 Identities = 206/360 (57%), Positives = 271/360 (75%)
 Frame = -2

Query: 1374 DILWKDQPNVSRSHFSSSGELYLRVFMSENCDRTKFWSVLMNNCLQIMDMIDWDRSHPDD 1195
            DILW++ P+ S+S   S+GELYL+VFMSE+CDR  FW+ L+++CL IMD+IDW++SHPD+
Sbjct: 1076 DILWRELPSTSKSSRGSTGELYLQVFMSESCDRNNFWNALVDSCLHIMDLIDWEQSHPDN 1135

Query: 1194 IRDVSSAYGIDVAWKCFLSSLKFAISDTGKCILSEHLILAADCLSATGEFVALNAKGLAQ 1015
            + D++ AYG+DVAWK FL +L  A+S+TGK IL EHL+LAADCL+ATGEFV LN KGLAQ
Sbjct: 1136 VHDLTVAYGVDVAWKYFLRNLNSAVSETGKKILLEHLVLAADCLTATGEFVPLNTKGLAQ 1195

Query: 1014 QRKQTSVSSPFAQACFSNPGDCFIKASKMGVVDNLEGSIDALSWGMIPSIGTGGQFDMLY 835
            QRK   V SPF QACFS+PGD F++A+K  + D+L+GS++AL+WG  PS GTG  FD++Y
Sbjct: 1196 QRKCAGVISPFMQACFSHPGDSFVRAAKTELSDDLQGSLEALAWGKTPSTGTGFSFDIIY 1255

Query: 834  SPKGHELANPVEVYDLLGSQIGSLEQNVKIKAPSWHDRMSNKCHTQPLCSYGDIAAKGRK 655
            S KG+E A P +VY LLG+ + S  Q VK+      +  ++K   + LC   D+  K  K
Sbjct: 1256 SGKGYEPAAPTDVYALLGNHVTSNRQQVKVTLDE-DNETADKALARRLCKLDDLNTKRCK 1314

Query: 654  NLEISLTKLRSVFTLKDIQKLSQELKYMLRKYPVNHQLSDVDKSIAMMALYFHPRRIEKI 475
            + + S+  LRS  +  DI+KLSQ LK ML KY ++ +LS+ DKSI MMAL+FHPRR EKI
Sbjct: 1315 S-QWSIANLRSFLSFNDIKKLSQALKQMLSKYAIDRELSEADKSIVMMALHFHPRRSEKI 1373

Query: 474  GTGFQEIKVGYHSKHENTRCFMLVRTDGTVEDFSYHKCVHGALEIIAPHRAKAYQSRWLN 295
            G G  EIK+GYH ++E++RCFMLVRTDGTVEDFSY KC+  ALE+IAP +AK Y  +WLN
Sbjct: 1374 GKGAMEIKIGYHKEYEDSRCFMLVRTDGTVEDFSYRKCLQHALELIAPQKAKTY--KWLN 1431


>ref|XP_009797468.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X2
            [Nicotiana sylvestris]
          Length = 1254

 Score =  423 bits (1088), Expect = e-115
 Identities = 206/360 (57%), Positives = 271/360 (75%)
 Frame = -2

Query: 1374 DILWKDQPNVSRSHFSSSGELYLRVFMSENCDRTKFWSVLMNNCLQIMDMIDWDRSHPDD 1195
            DILW++ P+ S+S   S+GELYL+VFMSE+CDR  FW+ L+++CL IMD+IDW+ SHPD+
Sbjct: 883  DILWRELPSTSKSSRGSTGELYLQVFMSESCDRNNFWNALVDSCLHIMDLIDWEWSHPDN 942

Query: 1194 IRDVSSAYGIDVAWKCFLSSLKFAISDTGKCILSEHLILAADCLSATGEFVALNAKGLAQ 1015
            + D++ AYG+DVAWK FL +L  A+S+TGK IL EHL+LAADCL+ATGEFV LN KGLAQ
Sbjct: 943  VHDLTVAYGVDVAWKYFLRNLNSAVSETGKKILPEHLVLAADCLTATGEFVPLNTKGLAQ 1002

Query: 1014 QRKQTSVSSPFAQACFSNPGDCFIKASKMGVVDNLEGSIDALSWGMIPSIGTGGQFDMLY 835
            QRK   V SPF QACFS+PGD F++A+K  + D+L+GS++AL+WG  PS GTG  FD++Y
Sbjct: 1003 QRKCAGVISPFMQACFSHPGDSFVRAAKTELSDDLQGSLEALAWGKTPSTGTGFSFDIIY 1062

Query: 834  SPKGHELANPVEVYDLLGSQIGSLEQNVKIKAPSWHDRMSNKCHTQPLCSYGDIAAKGRK 655
            S KG+E A P +VY LLG+ + S +Q VK+      +  ++K   + LC   D+  K  K
Sbjct: 1063 SGKGYEPAAPTDVYALLGNHVTSNKQQVKVTLDE-DNETADKALARRLCKLDDLNTKRCK 1121

Query: 654  NLEISLTKLRSVFTLKDIQKLSQELKYMLRKYPVNHQLSDVDKSIAMMALYFHPRRIEKI 475
            + + S+  LRS  +  DI+KLSQ LK ML KY ++ +LS+ DKSI MMAL+FHPRR EKI
Sbjct: 1122 S-QWSIANLRSFLSFNDIKKLSQALKQMLSKYAIDRELSEADKSIVMMALHFHPRRSEKI 1180

Query: 474  GTGFQEIKVGYHSKHENTRCFMLVRTDGTVEDFSYHKCVHGALEIIAPHRAKAYQSRWLN 295
            G G  EIK+GYH ++E++RCFMLVRTDGTVEDFSY KC+  ALE+IAP +AK Y  +WLN
Sbjct: 1181 GKGAMEIKIGYHKEYEDSRCFMLVRTDGTVEDFSYRKCLQHALELIAPQKAKTY--KWLN 1238


>ref|XP_009797463.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X1
            [Nicotiana sylvestris] gi|698503797|ref|XP_009797464.1|
            PREDICTED: DNA-directed RNA polymerase IV subunit 1
            isoform X1 [Nicotiana sylvestris]
            gi|698503800|ref|XP_009797465.1| PREDICTED: DNA-directed
            RNA polymerase IV subunit 1 isoform X1 [Nicotiana
            sylvestris] gi|698503802|ref|XP_009797466.1| PREDICTED:
            DNA-directed RNA polymerase IV subunit 1 isoform X1
            [Nicotiana sylvestris] gi|698503804|ref|XP_009797467.1|
            PREDICTED: DNA-directed RNA polymerase IV subunit 1
            isoform X1 [Nicotiana sylvestris]
          Length = 1447

 Score =  423 bits (1088), Expect = e-115
 Identities = 206/360 (57%), Positives = 271/360 (75%)
 Frame = -2

Query: 1374 DILWKDQPNVSRSHFSSSGELYLRVFMSENCDRTKFWSVLMNNCLQIMDMIDWDRSHPDD 1195
            DILW++ P+ S+S   S+GELYL+VFMSE+CDR  FW+ L+++CL IMD+IDW+ SHPD+
Sbjct: 1076 DILWRELPSTSKSSRGSTGELYLQVFMSESCDRNNFWNALVDSCLHIMDLIDWEWSHPDN 1135

Query: 1194 IRDVSSAYGIDVAWKCFLSSLKFAISDTGKCILSEHLILAADCLSATGEFVALNAKGLAQ 1015
            + D++ AYG+DVAWK FL +L  A+S+TGK IL EHL+LAADCL+ATGEFV LN KGLAQ
Sbjct: 1136 VHDLTVAYGVDVAWKYFLRNLNSAVSETGKKILPEHLVLAADCLTATGEFVPLNTKGLAQ 1195

Query: 1014 QRKQTSVSSPFAQACFSNPGDCFIKASKMGVVDNLEGSIDALSWGMIPSIGTGGQFDMLY 835
            QRK   V SPF QACFS+PGD F++A+K  + D+L+GS++AL+WG  PS GTG  FD++Y
Sbjct: 1196 QRKCAGVISPFMQACFSHPGDSFVRAAKTELSDDLQGSLEALAWGKTPSTGTGFSFDIIY 1255

Query: 834  SPKGHELANPVEVYDLLGSQIGSLEQNVKIKAPSWHDRMSNKCHTQPLCSYGDIAAKGRK 655
            S KG+E A P +VY LLG+ + S +Q VK+      +  ++K   + LC   D+  K  K
Sbjct: 1256 SGKGYEPAAPTDVYALLGNHVTSNKQQVKVTLDE-DNETADKALARRLCKLDDLNTKRCK 1314

Query: 654  NLEISLTKLRSVFTLKDIQKLSQELKYMLRKYPVNHQLSDVDKSIAMMALYFHPRRIEKI 475
            + + S+  LRS  +  DI+KLSQ LK ML KY ++ +LS+ DKSI MMAL+FHPRR EKI
Sbjct: 1315 S-QWSIANLRSFLSFNDIKKLSQALKQMLSKYAIDRELSEADKSIVMMALHFHPRRSEKI 1373

Query: 474  GTGFQEIKVGYHSKHENTRCFMLVRTDGTVEDFSYHKCVHGALEIIAPHRAKAYQSRWLN 295
            G G  EIK+GYH ++E++RCFMLVRTDGTVEDFSY KC+  ALE+IAP +AK Y  +WLN
Sbjct: 1374 GKGAMEIKIGYHKEYEDSRCFMLVRTDGTVEDFSYRKCLQHALELIAPQKAKTY--KWLN 1431


>ref|XP_007210915.1| hypothetical protein PRUPE_ppa000278mg [Prunus persica]
            gi|462406650|gb|EMJ12114.1| hypothetical protein
            PRUPE_ppa000278mg [Prunus persica]
          Length = 1356

 Score =  421 bits (1081), Expect = e-114
 Identities = 208/361 (57%), Positives = 262/361 (72%), Gaps = 1/361 (0%)
 Frame = -2

Query: 1374 DILWKDQPNVSRSHFSSSGELYLRVFMSENCDRTKFWSVLMNNCLQIMDMIDWDRSHPDD 1195
            DILW D P  S+    SSGELYLRV MS    R + WS+LM+NCLQIMD+IDW RSHPD+
Sbjct: 1002 DILWNDHPRESKKIHGSSGELYLRVSMSGKTGRRRLWSMLMDNCLQIMDLIDWSRSHPDN 1061

Query: 1194 IRDVSSAYGIDVAWKCFLSSLKFAISDTGKCILSEHLILAADCLSATGEFVALNAKGLAQ 1015
            + D   AYGID  WK FL++L+ A +D GK IL +HLIL ADCLSATGEFV LNAKG+AQ
Sbjct: 1062 VHDYCIAYGIDAGWKYFLNNLETAANDIGKDILPQHLILVADCLSATGEFVGLNAKGIAQ 1121

Query: 1014 QRKQTSVSSPFAQACFSNPGDCFIKASKMGVVDNLEGSIDALSWGMIPSIGTGGQFDMLY 835
            Q+  TSVSSPF QACFS+PG CFIKA+K GVVD L GS++AL+WG  P  GTG QFD+LY
Sbjct: 1122 QKGHTSVSSPFVQACFSSPGACFIKAAKGGVVDELHGSVEALAWGNTPPSGTGRQFDILY 1181

Query: 834  SPKGHELANPVEVYDLLGSQIGSLEQNVKIKAPSWHDRMSNKCHTQPLCSYGDIAAKG-R 658
            S +G  L+ P+  YDLLGSQI S  +N    + +W++ + +KC         D+ + G  
Sbjct: 1182 SKEGLNLSKPLNPYDLLGSQISSSRENAFETSKAWNNTL-DKC---------DVTSIGLE 1231

Query: 657  KNLEISLTKLRSVFTLKDIQKLSQELKYMLRKYPVNHQLSDVDKSIAMMALYFHPRRIEK 478
            K+  +  + +R   T+ DIQK +Q LK +LRKY +N  L++ DKSI  MAL+FHP +++K
Sbjct: 1232 KSESVFKSVIRKYLTINDIQKWTQTLKRILRKYDINESLTEGDKSILKMALHFHPHKVDK 1291

Query: 477  IGTGFQEIKVGYHSKHENTRCFMLVRTDGTVEDFSYHKCVHGALEIIAPHRAKAYQSRWL 298
            +G+G Q+IKVG H KHEN RCFMLVR D T EDFSYHKCV GALEI+AP RAK+Y+S+W+
Sbjct: 1292 MGSGVQDIKVGQHPKHENARCFMLVRIDRTEEDFSYHKCVLGALEIVAPERAKSYRSKWM 1351

Query: 297  N 295
            N
Sbjct: 1352 N 1352


>ref|XP_012488706.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like [Gossypium
            raimondii]
          Length = 1485

 Score =  420 bits (1080), Expect = e-114
 Identities = 207/357 (57%), Positives = 263/357 (73%)
 Frame = -2

Query: 1371 ILWKDQPNVSRSHFSSSGELYLRVFMSENCDRTKFWSVLMNNCLQIMDMIDWDRSHPDDI 1192
            ILW D+  VS+SH +S GELYLRV ++    +TK W +LMN+CL IMD+IDW RSHPDDI
Sbjct: 1125 ILWNDRFKVSKSHKTSPGELYLRVAVTGGFGKTKLWGMLMNDCLPIMDLIDWTRSHPDDI 1184

Query: 1191 RDVSSAYGIDVAWKCFLSSLKFAISDTGKCILSEHLILAADCLSATGEFVALNAKGLAQQ 1012
                SAYGID  WK FL++LK AISDTGK IL+EHL L ADCLS TGEFV LN+KGL  +
Sbjct: 1185 NQFCSAYGIDSGWKFFLNNLKSAISDTGKTILNEHLHLVADCLSVTGEFVGLNSKGLRLR 1244

Query: 1011 RKQTSVSSPFAQACFSNPGDCFIKASKMGVVDNLEGSIDALSWGMIPSIGTGGQFDMLYS 832
            ++   VSSPF QACFSNP   F+KA+K GV DNL+G+IDALSWG +P IGTG QFD+LYS
Sbjct: 1245 QEHAFVSSPFMQACFSNPSASFVKAAKKGVSDNLQGTIDALSWGRVPCIGTGAQFDILYS 1304

Query: 831  PKGHELANPVEVYDLLGSQIGSLEQNVKIKAPSWHDRMSNKCHTQPLCSYGDIAAKGRKN 652
             K   +  PV+VY+LLG+ +GS  Q+V+ + P   +  S K  ++ + + GD A +  KN
Sbjct: 1305 MKDEMITEPVDVYNLLGNIVGSQNQDVEFEVPQACNIKSEKYVSELMDALGDSAFERLKN 1364

Query: 651  LEISLTKLRSVFTLKDIQKLSQELKYMLRKYPVNHQLSDVDKSIAMMALYFHPRRIEKIG 472
            +E  +  LR   TL DIQ+LS+ LK +L K P+ H+LS  D + AMMALYFHPRR EK+G
Sbjct: 1365 IETKI--LREFLTLNDIQRLSRTLKDILHKSPIGHRLSGADWNSAMMALYFHPRRDEKVG 1422

Query: 471  TGFQEIKVGYHSKHENTRCFMLVRTDGTVEDFSYHKCVHGALEIIAPHRAKAYQSRW 301
            +G QEIKVGYH +H+N+RCF+L RTDG + DFSYHKCV GALE+IAP + + Y+S+W
Sbjct: 1423 SGAQEIKVGYHPEHKNSRCFLLARTDGAIVDFSYHKCVIGALEVIAPDKVQFYKSKW 1479


>gb|KJB39621.1| hypothetical protein B456_007G022200 [Gossypium raimondii]
          Length = 1397

 Score =  420 bits (1080), Expect = e-114
 Identities = 207/357 (57%), Positives = 263/357 (73%)
 Frame = -2

Query: 1371 ILWKDQPNVSRSHFSSSGELYLRVFMSENCDRTKFWSVLMNNCLQIMDMIDWDRSHPDDI 1192
            ILW D+  VS+SH +S GELYLRV ++    +TK W +LMN+CL IMD+IDW RSHPDDI
Sbjct: 1037 ILWNDRFKVSKSHKTSPGELYLRVAVTGGFGKTKLWGMLMNDCLPIMDLIDWTRSHPDDI 1096

Query: 1191 RDVSSAYGIDVAWKCFLSSLKFAISDTGKCILSEHLILAADCLSATGEFVALNAKGLAQQ 1012
                SAYGID  WK FL++LK AISDTGK IL+EHL L ADCLS TGEFV LN+KGL  +
Sbjct: 1097 NQFCSAYGIDSGWKFFLNNLKSAISDTGKTILNEHLHLVADCLSVTGEFVGLNSKGLRLR 1156

Query: 1011 RKQTSVSSPFAQACFSNPGDCFIKASKMGVVDNLEGSIDALSWGMIPSIGTGGQFDMLYS 832
            ++   VSSPF QACFSNP   F+KA+K GV DNL+G+IDALSWG +P IGTG QFD+LYS
Sbjct: 1157 QEHAFVSSPFMQACFSNPSASFVKAAKKGVSDNLQGTIDALSWGRVPCIGTGAQFDILYS 1216

Query: 831  PKGHELANPVEVYDLLGSQIGSLEQNVKIKAPSWHDRMSNKCHTQPLCSYGDIAAKGRKN 652
             K   +  PV+VY+LLG+ +GS  Q+V+ + P   +  S K  ++ + + GD A +  KN
Sbjct: 1217 MKDEMITEPVDVYNLLGNIVGSQNQDVEFEVPQACNIKSEKYVSELMDALGDSAFERLKN 1276

Query: 651  LEISLTKLRSVFTLKDIQKLSQELKYMLRKYPVNHQLSDVDKSIAMMALYFHPRRIEKIG 472
            +E  +  LR   TL DIQ+LS+ LK +L K P+ H+LS  D + AMMALYFHPRR EK+G
Sbjct: 1277 IETKI--LREFLTLNDIQRLSRTLKDILHKSPIGHRLSGADWNSAMMALYFHPRRDEKVG 1334

Query: 471  TGFQEIKVGYHSKHENTRCFMLVRTDGTVEDFSYHKCVHGALEIIAPHRAKAYQSRW 301
            +G QEIKVGYH +H+N+RCF+L RTDG + DFSYHKCV GALE+IAP + + Y+S+W
Sbjct: 1335 SGAQEIKVGYHPEHKNSRCFLLARTDGAIVDFSYHKCVIGALEVIAPDKVQFYKSKW 1391


>ref|XP_006358859.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X2
            [Solanum tuberosum]
          Length = 1233

 Score =  416 bits (1070), Expect = e-113
 Identities = 210/361 (58%), Positives = 270/361 (74%), Gaps = 1/361 (0%)
 Frame = -2

Query: 1374 DILWKDQPNVSRSHFSSSGELYLRVFMSENCDRTKFWSVLMNNCLQIMDMIDWDRSHPDD 1195
            DILWK+ P+ S+S   S+GELYL+VFMSE+CDR KFW+ L+++CLQI D+IDW+RS+PDD
Sbjct: 873  DILWKELPSPSKSSRGSTGELYLQVFMSESCDRIKFWNALVDSCLQIRDLIDWERSYPDD 932

Query: 1194 IRDVSSAYGIDVAWKCFLSSLKFAISDTGKCILSEHLILAADCLSATGEFVALNAKGLAQ 1015
            + D++ AYGIDVAW+ FL  L  A+S+TGK IL EHL+LAAD L+ATGEFV L+AKGL  
Sbjct: 933  VHDLTVAYGIDVAWEYFLCKLHSAVSETGKKILPEHLVLAADSLTATGEFVPLSAKGLTL 992

Query: 1014 QRKQTSVSSPFAQACFSNPGDCFIKASKMGVVDNLEGSIDALSWGMIPSIGTGGQFDMLY 835
            QRK   V SPF QACFSNPGD F++A+KMG+ DNL+GS+++L+WG  PSIGTG  FD++Y
Sbjct: 993  QRKAAGVISPFMQACFSNPGDSFVRAAKMGLSDNLQGSLESLAWGKTPSIGTGSSFDIIY 1052

Query: 834  SPKGHELANPVEVYDLLGSQIGSLEQNVKIKAPSWHDRMSNKCHTQPLCSYGDIAAKGRK 655
            S KG+E A P++VY LL + + S    VK+        M  K   + L    D+  K  K
Sbjct: 1053 SGKGYEPAEPIDVYTLLQNHVTSGTPKVKVTLDE-DGGMDGKSLARRLDRLDDLNKKSCK 1111

Query: 654  NLEISLTKLRSVFTLKDIQKLSQELKYMLRKYPVNHQLSDVDKSIAMMALYFHPRRIEKI 475
            + E S+TKLRS  +  DI+KLSQ LK ML KY ++ +L++ DK IAMMAL FHPRR EKI
Sbjct: 1112 S-EWSITKLRSFISFNDIKKLSQSLKQMLSKYAIDRELNEADKCIAMMALQFHPRRNEKI 1170

Query: 474  GTGF-QEIKVGYHSKHENTRCFMLVRTDGTVEDFSYHKCVHGALEIIAPHRAKAYQSRWL 298
            G G  QEIK+GYH ++E++RCFMLVR+DG+VEDFSY KC+  ALE+IAP +AK   SRWL
Sbjct: 1171 GKGAPQEIKIGYHKEYEDSRCFMLVRSDGSVEDFSYRKCMQHALELIAPQKAKT--SRWL 1228

Query: 297  N 295
            N
Sbjct: 1229 N 1229


>ref|XP_006358858.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X1
            [Solanum tuberosum]
          Length = 1446

 Score =  416 bits (1070), Expect = e-113
 Identities = 210/361 (58%), Positives = 270/361 (74%), Gaps = 1/361 (0%)
 Frame = -2

Query: 1374 DILWKDQPNVSRSHFSSSGELYLRVFMSENCDRTKFWSVLMNNCLQIMDMIDWDRSHPDD 1195
            DILWK+ P+ S+S   S+GELYL+VFMSE+CDR KFW+ L+++CLQI D+IDW+RS+PDD
Sbjct: 1086 DILWKELPSPSKSSRGSTGELYLQVFMSESCDRIKFWNALVDSCLQIRDLIDWERSYPDD 1145

Query: 1194 IRDVSSAYGIDVAWKCFLSSLKFAISDTGKCILSEHLILAADCLSATGEFVALNAKGLAQ 1015
            + D++ AYGIDVAW+ FL  L  A+S+TGK IL EHL+LAAD L+ATGEFV L+AKGL  
Sbjct: 1146 VHDLTVAYGIDVAWEYFLCKLHSAVSETGKKILPEHLVLAADSLTATGEFVPLSAKGLTL 1205

Query: 1014 QRKQTSVSSPFAQACFSNPGDCFIKASKMGVVDNLEGSIDALSWGMIPSIGTGGQFDMLY 835
            QRK   V SPF QACFSNPGD F++A+KMG+ DNL+GS+++L+WG  PSIGTG  FD++Y
Sbjct: 1206 QRKAAGVISPFMQACFSNPGDSFVRAAKMGLSDNLQGSLESLAWGKTPSIGTGSSFDIIY 1265

Query: 834  SPKGHELANPVEVYDLLGSQIGSLEQNVKIKAPSWHDRMSNKCHTQPLCSYGDIAAKGRK 655
            S KG+E A P++VY LL + + S    VK+        M  K   + L    D+  K  K
Sbjct: 1266 SGKGYEPAEPIDVYTLLQNHVTSGTPKVKVTLDE-DGGMDGKSLARRLDRLDDLNKKSCK 1324

Query: 654  NLEISLTKLRSVFTLKDIQKLSQELKYMLRKYPVNHQLSDVDKSIAMMALYFHPRRIEKI 475
            + E S+TKLRS  +  DI+KLSQ LK ML KY ++ +L++ DK IAMMAL FHPRR EKI
Sbjct: 1325 S-EWSITKLRSFISFNDIKKLSQSLKQMLSKYAIDRELNEADKCIAMMALQFHPRRNEKI 1383

Query: 474  GTGF-QEIKVGYHSKHENTRCFMLVRTDGTVEDFSYHKCVHGALEIIAPHRAKAYQSRWL 298
            G G  QEIK+GYH ++E++RCFMLVR+DG+VEDFSY KC+  ALE+IAP +AK   SRWL
Sbjct: 1384 GKGAPQEIKIGYHKEYEDSRCFMLVRSDGSVEDFSYRKCMQHALELIAPQKAKT--SRWL 1441

Query: 297  N 295
            N
Sbjct: 1442 N 1442


>ref|XP_011650451.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X3
            [Cucumis sativus]
          Length = 1361

 Score =  415 bits (1067), Expect = e-113
 Identities = 211/362 (58%), Positives = 259/362 (71%), Gaps = 1/362 (0%)
 Frame = -2

Query: 1374 DILWKDQPNVSRSHFSSSGELYLRVFMSENCDRTKFWSVLMNNCLQIMDMIDWDRSHPDD 1195
            DI W D+P V +    S GELYLRV MS     ++FW+ LMNNCL IMD+IDW RSHPD+
Sbjct: 1000 DITWNDRPKVPKPR-CSHGELYLRVTMSGE-GNSRFWATLMNNCLPIMDLIDWTRSHPDN 1057

Query: 1194 IRDVSSAYGIDVAWKCFLSSLKFAISDTGKCILSEHLILAADCLSATGEFVALNAKGLAQ 1015
               +  AYGID  WK FL+SL+ A  D GK I  EHL+L ++ LSATGEFV LN KGL  
Sbjct: 1058 THSLCLAYGIDSGWKYFLNSLESATLDVGKTIRLEHLLLVSNSLSATGEFVGLNVKGLTH 1117

Query: 1014 QRKQTSVSSPFAQACFSNPGDCFIKASKMGVVDNLEGSIDALSWGMIPSIGTGGQFDMLY 835
            QR+   V +PF QACFS+PG C IKA+K G+ DNL GS+DAL+WG +PS+GTGGQFD+LY
Sbjct: 1118 QREHALVKTPFMQACFSSPGACMIKAAKAGIKDNLSGSLDALAWGRMPSLGTGGQFDILY 1177

Query: 834  SPKGHELANPVEVYDLLGSQIGSLEQNVKIKAPSWHDRMSNKCHTQPLCSYGDIAAKGRK 655
            S KGHEL  PV+VY+LLG Q    +QN KI++    + +S K   Q +   G    KG K
Sbjct: 1178 SGKGHELNKPVDVYNLLGGQSTCEKQNTKIESLD-KNTISEKYSAQLMLKNGGSTIKGLK 1236

Query: 654  NLE-ISLTKLRSVFTLKDIQKLSQELKYMLRKYPVNHQLSDVDKSIAMMALYFHPRRIEK 478
             L+ +S + LR   TL DIQKLS  L+ +L KY +N +L++VDKS  MMALYFHP R EK
Sbjct: 1237 RLDSVSKSILRKFLTLNDIQKLSFALRTILHKYSLNERLNEVDKSTLMMALYFHPHRDEK 1296

Query: 477  IGTGFQEIKVGYHSKHENTRCFMLVRTDGTVEDFSYHKCVHGALEIIAPHRAKAYQSRWL 298
            IG G Q+IKVG HSK++NTRCF+L+R+DGT EDFSYHKCV GALEIIAPHR K YQS+W+
Sbjct: 1297 IGVGAQDIKVGSHSKYQNTRCFVLIRSDGTTEDFSYHKCVLGALEIIAPHRVKGYQSKWM 1356

Query: 297  NE 292
             E
Sbjct: 1357 QE 1358


>ref|XP_011650450.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X2
            [Cucumis sativus]
          Length = 1362

 Score =  415 bits (1067), Expect = e-113
 Identities = 211/362 (58%), Positives = 259/362 (71%), Gaps = 1/362 (0%)
 Frame = -2

Query: 1374 DILWKDQPNVSRSHFSSSGELYLRVFMSENCDRTKFWSVLMNNCLQIMDMIDWDRSHPDD 1195
            DI W D+P V +    S GELYLRV MS     ++FW+ LMNNCL IMD+IDW RSHPD+
Sbjct: 1001 DITWNDRPKVPKPR-CSHGELYLRVTMSGE-GNSRFWATLMNNCLPIMDLIDWTRSHPDN 1058

Query: 1194 IRDVSSAYGIDVAWKCFLSSLKFAISDTGKCILSEHLILAADCLSATGEFVALNAKGLAQ 1015
               +  AYGID  WK FL+SL+ A  D GK I  EHL+L ++ LSATGEFV LN KGL  
Sbjct: 1059 THSLCLAYGIDSGWKYFLNSLESATLDVGKTIRLEHLLLVSNSLSATGEFVGLNVKGLTH 1118

Query: 1014 QRKQTSVSSPFAQACFSNPGDCFIKASKMGVVDNLEGSIDALSWGMIPSIGTGGQFDMLY 835
            QR+   V +PF QACFS+PG C IKA+K G+ DNL GS+DAL+WG +PS+GTGGQFD+LY
Sbjct: 1119 QREHALVKTPFMQACFSSPGACMIKAAKAGIKDNLSGSLDALAWGRMPSLGTGGQFDILY 1178

Query: 834  SPKGHELANPVEVYDLLGSQIGSLEQNVKIKAPSWHDRMSNKCHTQPLCSYGDIAAKGRK 655
            S KGHEL  PV+VY+LLG Q    +QN KI++    + +S K   Q +   G    KG K
Sbjct: 1179 SGKGHELNKPVDVYNLLGGQSTCEKQNTKIESLD-KNTISEKYSAQLMLKNGGSTIKGLK 1237

Query: 654  NLE-ISLTKLRSVFTLKDIQKLSQELKYMLRKYPVNHQLSDVDKSIAMMALYFHPRRIEK 478
             L+ +S + LR   TL DIQKLS  L+ +L KY +N +L++VDKS  MMALYFHP R EK
Sbjct: 1238 RLDSVSKSILRKFLTLNDIQKLSFALRTILHKYSLNERLNEVDKSTLMMALYFHPHRDEK 1297

Query: 477  IGTGFQEIKVGYHSKHENTRCFMLVRTDGTVEDFSYHKCVHGALEIIAPHRAKAYQSRWL 298
            IG G Q+IKVG HSK++NTRCF+L+R+DGT EDFSYHKCV GALEIIAPHR K YQS+W+
Sbjct: 1298 IGVGAQDIKVGSHSKYQNTRCFVLIRSDGTTEDFSYHKCVLGALEIIAPHRVKGYQSKWM 1357

Query: 297  NE 292
             E
Sbjct: 1358 QE 1359


>ref|XP_011650447.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X1
            [Cucumis sativus] gi|778675671|ref|XP_011650448.1|
            PREDICTED: DNA-directed RNA polymerase IV subunit 1
            isoform X1 [Cucumis sativus]
            gi|778675673|ref|XP_011650449.1| PREDICTED: DNA-directed
            RNA polymerase IV subunit 1 isoform X1 [Cucumis sativus]
            gi|700200830|gb|KGN55963.1| hypothetical protein
            Csa_3G039340 [Cucumis sativus]
          Length = 1483

 Score =  415 bits (1067), Expect = e-113
 Identities = 211/362 (58%), Positives = 259/362 (71%), Gaps = 1/362 (0%)
 Frame = -2

Query: 1374 DILWKDQPNVSRSHFSSSGELYLRVFMSENCDRTKFWSVLMNNCLQIMDMIDWDRSHPDD 1195
            DI W D+P V +    S GELYLRV MS     ++FW+ LMNNCL IMD+IDW RSHPD+
Sbjct: 1122 DITWNDRPKVPKPR-CSHGELYLRVTMSGE-GNSRFWATLMNNCLPIMDLIDWTRSHPDN 1179

Query: 1194 IRDVSSAYGIDVAWKCFLSSLKFAISDTGKCILSEHLILAADCLSATGEFVALNAKGLAQ 1015
               +  AYGID  WK FL+SL+ A  D GK I  EHL+L ++ LSATGEFV LN KGL  
Sbjct: 1180 THSLCLAYGIDSGWKYFLNSLESATLDVGKTIRLEHLLLVSNSLSATGEFVGLNVKGLTH 1239

Query: 1014 QRKQTSVSSPFAQACFSNPGDCFIKASKMGVVDNLEGSIDALSWGMIPSIGTGGQFDMLY 835
            QR+   V +PF QACFS+PG C IKA+K G+ DNL GS+DAL+WG +PS+GTGGQFD+LY
Sbjct: 1240 QREHALVKTPFMQACFSSPGACMIKAAKAGIKDNLSGSLDALAWGRMPSLGTGGQFDILY 1299

Query: 834  SPKGHELANPVEVYDLLGSQIGSLEQNVKIKAPSWHDRMSNKCHTQPLCSYGDIAAKGRK 655
            S KGHEL  PV+VY+LLG Q    +QN KI++    + +S K   Q +   G    KG K
Sbjct: 1300 SGKGHELNKPVDVYNLLGGQSTCEKQNTKIESLD-KNTISEKYSAQLMLKNGGSTIKGLK 1358

Query: 654  NLE-ISLTKLRSVFTLKDIQKLSQELKYMLRKYPVNHQLSDVDKSIAMMALYFHPRRIEK 478
             L+ +S + LR   TL DIQKLS  L+ +L KY +N +L++VDKS  MMALYFHP R EK
Sbjct: 1359 RLDSVSKSILRKFLTLNDIQKLSFALRTILHKYSLNERLNEVDKSTLMMALYFHPHRDEK 1418

Query: 477  IGTGFQEIKVGYHSKHENTRCFMLVRTDGTVEDFSYHKCVHGALEIIAPHRAKAYQSRWL 298
            IG G Q+IKVG HSK++NTRCF+L+R+DGT EDFSYHKCV GALEIIAPHR K YQS+W+
Sbjct: 1419 IGVGAQDIKVGSHSKYQNTRCFVLIRSDGTTEDFSYHKCVLGALEIIAPHRVKGYQSKWM 1478

Query: 297  NE 292
             E
Sbjct: 1479 QE 1480


>ref|XP_008448971.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase IV
            subunit 1 [Cucumis melo]
          Length = 1489

 Score =  415 bits (1066), Expect = e-113
 Identities = 211/362 (58%), Positives = 259/362 (71%), Gaps = 1/362 (0%)
 Frame = -2

Query: 1374 DILWKDQPNVSRSHFSSSGELYLRVFMSENCDRTKFWSVLMNNCLQIMDMIDWDRSHPDD 1195
            DI W D+P V +    S GELYLRV MS     ++FW+ L+NNCL IMD+IDW RSHPD+
Sbjct: 1128 DITWNDRPKVPKPR-CSHGELYLRVTMSGE-GNSRFWATLINNCLPIMDLIDWTRSHPDN 1185

Query: 1194 IRDVSSAYGIDVAWKCFLSSLKFAISDTGKCILSEHLILAADCLSATGEFVALNAKGLAQ 1015
               +  AYGID  WK FL+SL+ A  D GK I  EHL+L A+ LSATGEFV LN KGL  
Sbjct: 1186 THSLCLAYGIDSGWKYFLNSLECATLDIGKTIRLEHLLLVANSLSATGEFVGLNVKGLTH 1245

Query: 1014 QRKQTSVSSPFAQACFSNPGDCFIKASKMGVVDNLEGSIDALSWGMIPSIGTGGQFDMLY 835
            QR+   V +PF QACFS+PG C IKA+K G+ DNL GS+DAL+WG +PS+GTGGQFD+LY
Sbjct: 1246 QREHALVKTPFMQACFSSPGACLIKAAKAGIKDNLSGSLDALAWGRMPSLGTGGQFDILY 1305

Query: 834  SPKGHELANPVEVYDLLGSQIGSLEQNVKIKAPSWHDRMSNKCHTQPLCSYGDIAAKGRK 655
            S KGHEL  PV+VY+LLG Q    +QN KI++    + +S K   Q +   G    KG K
Sbjct: 1306 SGKGHELNKPVDVYNLLGGQSTCEKQNAKIESVD-KNNISEKYSAQLVLKNGGSTIKGLK 1364

Query: 654  NLE-ISLTKLRSVFTLKDIQKLSQELKYMLRKYPVNHQLSDVDKSIAMMALYFHPRRIEK 478
             L+ +S + LR   TL DIQKLS  L+ +L KY +N +L++VDKS  MMALYFHP R EK
Sbjct: 1365 RLDSVSKSILRKFLTLNDIQKLSFALRTILHKYSLNERLNEVDKSTLMMALYFHPHRDEK 1424

Query: 477  IGTGFQEIKVGYHSKHENTRCFMLVRTDGTVEDFSYHKCVHGALEIIAPHRAKAYQSRWL 298
            IG G Q+IKVG HSK++NTRCF+L+R+DGT EDFSYHKCV GALEIIAPHR K YQS+W+
Sbjct: 1425 IGVGAQDIKVGSHSKYQNTRCFVLIRSDGTTEDFSYHKCVLGALEIIAPHRVKGYQSKWM 1484

Query: 297  NE 292
             E
Sbjct: 1485 QE 1486


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