BLASTX nr result
ID: Cornus23_contig00020616
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cornus23_contig00020616
(1375 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010661376.1| PREDICTED: DNA-directed RNA polymerase IV su... 478 e-132
ref|XP_010661369.1| PREDICTED: DNA-directed RNA polymerase IV su... 478 e-132
ref|XP_010661365.1| PREDICTED: DNA-directed RNA polymerase IV su... 478 e-132
emb|CDP09818.1| unnamed protein product [Coffea canephora] 472 e-130
emb|CBI34757.3| unnamed protein product [Vitis vinifera] 470 e-129
ref|XP_007040111.1| DNA-directed RNA polymerase II subunit RPB1-... 446 e-122
ref|XP_010053343.1| PREDICTED: DNA-directed RNA polymerase IV su... 439 e-120
ref|XP_009593318.1| PREDICTED: DNA-directed RNA polymerase IV su... 424 e-116
ref|XP_009593317.1| PREDICTED: DNA-directed RNA polymerase IV su... 424 e-116
ref|XP_009797468.1| PREDICTED: DNA-directed RNA polymerase IV su... 423 e-115
ref|XP_009797463.1| PREDICTED: DNA-directed RNA polymerase IV su... 423 e-115
ref|XP_007210915.1| hypothetical protein PRUPE_ppa000278mg [Prun... 421 e-114
ref|XP_012488706.1| PREDICTED: DNA-directed RNA polymerase IV su... 420 e-114
gb|KJB39621.1| hypothetical protein B456_007G022200 [Gossypium r... 420 e-114
ref|XP_006358859.1| PREDICTED: DNA-directed RNA polymerase IV su... 416 e-113
ref|XP_006358858.1| PREDICTED: DNA-directed RNA polymerase IV su... 416 e-113
ref|XP_011650451.1| PREDICTED: DNA-directed RNA polymerase IV su... 415 e-113
ref|XP_011650450.1| PREDICTED: DNA-directed RNA polymerase IV su... 415 e-113
ref|XP_011650447.1| PREDICTED: DNA-directed RNA polymerase IV su... 415 e-113
ref|XP_008448971.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 415 e-113
>ref|XP_010661376.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X3 [Vitis
vinifera]
Length = 1354
Score = 478 bits (1230), Expect = e-132
Identities = 234/360 (65%), Positives = 280/360 (77%), Gaps = 1/360 (0%)
Frame = -2
Query: 1374 DILWKDQPNVSRSHFSSSGELYLRVFMSENCDRTKFWSVLMNNCLQIMDMIDWDRSHPDD 1195
DILW D P+ S SSSG LYLRV++S +C + FW VLM+ CLQIMDMIDW+RSHPD+
Sbjct: 991 DILWNDNPD-SDVLKSSSGRLYLRVYVSGDCGKKNFWGVLMDACLQIMDMIDWERSHPDN 1049
Query: 1194 IRDVSSAYGIDVAWKCFLSSLKFAISDTGKCILSEHLILAADCLSATGEFVALNAKGLAQ 1015
I D+ YGID WK FL+SLK AISD GK +L EHL+L A CLSATGEFV LNAKG+A+
Sbjct: 1050 IHDIFVVYGIDAGWKYFLNSLKSAISDIGKTVLPEHLLLVASCLSATGEFVGLNAKGMAR 1109
Query: 1014 QRKQTSVSSPFAQACFSNPGDCFIKASKMGVVDNLEGSIDALSWGMIPSIGTGGQFDMLY 835
Q++ TS+SSPF Q CFS+PG CFIKA K V DNL GS+DAL+WG IPS+G+GG FD+LY
Sbjct: 1110 QKELTSISSPFMQGCFSSPGSCFIKAGKRAVADNLHGSLDALAWGKIPSVGSGGHFDILY 1169
Query: 834 SPKGHELANPVEVYDLLGSQIGSLEQNVKIKAPSWHDRMSNKCHTQPLCSYGDIAAKGRK 655
S KGHELA P ++Y LLGSQ EQN+K+K P + + KC Q + + GD A+KG K
Sbjct: 1170 SAKGHELARPEDIYKLLGSQTSCHEQNLKVKVPITCYQTTTKCGAQLVYANGDSASKGCK 1229
Query: 654 NLE-ISLTKLRSVFTLKDIQKLSQELKYMLRKYPVNHQLSDVDKSIAMMALYFHPRRIEK 478
+LE IS + LRS +L DIQKLS+ LK++L+KYP+NHQLS++DK+ MMALYFHPRR EK
Sbjct: 1230 SLEKISKSVLRSFLSLNDIQKLSRRLKFILQKYPINHQLSEIDKTTLMMALYFHPRRDEK 1289
Query: 477 IGTGFQEIKVGYHSKHENTRCFMLVRTDGTVEDFSYHKCVHGALEIIAPHRAKAYQSRWL 298
IG G Q IKV YHSK+ NTRCF LVRTDGT EDFSYHKCVHGALEII P RA++YQSRWL
Sbjct: 1290 IGPGAQNIKVRYHSKYHNTRCFSLVRTDGTEEDFSYHKCVHGALEIIDPRRARSYQSRWL 1349
>ref|XP_010661369.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X2 [Vitis
vinifera]
Length = 1458
Score = 478 bits (1230), Expect = e-132
Identities = 234/360 (65%), Positives = 280/360 (77%), Gaps = 1/360 (0%)
Frame = -2
Query: 1374 DILWKDQPNVSRSHFSSSGELYLRVFMSENCDRTKFWSVLMNNCLQIMDMIDWDRSHPDD 1195
DILW D P+ S SSSG LYLRV++S +C + FW VLM+ CLQIMDMIDW+RSHPD+
Sbjct: 1095 DILWNDNPD-SDVLKSSSGRLYLRVYVSGDCGKKNFWGVLMDACLQIMDMIDWERSHPDN 1153
Query: 1194 IRDVSSAYGIDVAWKCFLSSLKFAISDTGKCILSEHLILAADCLSATGEFVALNAKGLAQ 1015
I D+ YGID WK FL+SLK AISD GK +L EHL+L A CLSATGEFV LNAKG+A+
Sbjct: 1154 IHDIFVVYGIDAGWKYFLNSLKSAISDIGKTVLPEHLLLVASCLSATGEFVGLNAKGMAR 1213
Query: 1014 QRKQTSVSSPFAQACFSNPGDCFIKASKMGVVDNLEGSIDALSWGMIPSIGTGGQFDMLY 835
Q++ TS+SSPF Q CFS+PG CFIKA K V DNL GS+DAL+WG IPS+G+GG FD+LY
Sbjct: 1214 QKELTSISSPFMQGCFSSPGSCFIKAGKRAVADNLHGSLDALAWGKIPSVGSGGHFDILY 1273
Query: 834 SPKGHELANPVEVYDLLGSQIGSLEQNVKIKAPSWHDRMSNKCHTQPLCSYGDIAAKGRK 655
S KGHELA P ++Y LLGSQ EQN+K+K P + + KC Q + + GD A+KG K
Sbjct: 1274 SAKGHELARPEDIYKLLGSQTSCHEQNLKVKVPITCYQTTTKCGAQLVYANGDSASKGCK 1333
Query: 654 NLE-ISLTKLRSVFTLKDIQKLSQELKYMLRKYPVNHQLSDVDKSIAMMALYFHPRRIEK 478
+LE IS + LRS +L DIQKLS+ LK++L+KYP+NHQLS++DK+ MMALYFHPRR EK
Sbjct: 1334 SLEKISKSVLRSFLSLNDIQKLSRRLKFILQKYPINHQLSEIDKTTLMMALYFHPRRDEK 1393
Query: 477 IGTGFQEIKVGYHSKHENTRCFMLVRTDGTVEDFSYHKCVHGALEIIAPHRAKAYQSRWL 298
IG G Q IKV YHSK+ NTRCF LVRTDGT EDFSYHKCVHGALEII P RA++YQSRWL
Sbjct: 1394 IGPGAQNIKVRYHSKYHNTRCFSLVRTDGTEEDFSYHKCVHGALEIIDPRRARSYQSRWL 1453
>ref|XP_010661365.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X1 [Vitis
vinifera]
Length = 1460
Score = 478 bits (1230), Expect = e-132
Identities = 234/360 (65%), Positives = 280/360 (77%), Gaps = 1/360 (0%)
Frame = -2
Query: 1374 DILWKDQPNVSRSHFSSSGELYLRVFMSENCDRTKFWSVLMNNCLQIMDMIDWDRSHPDD 1195
DILW D P+ S SSSG LYLRV++S +C + FW VLM+ CLQIMDMIDW+RSHPD+
Sbjct: 1097 DILWNDNPD-SDVLKSSSGRLYLRVYVSGDCGKKNFWGVLMDACLQIMDMIDWERSHPDN 1155
Query: 1194 IRDVSSAYGIDVAWKCFLSSLKFAISDTGKCILSEHLILAADCLSATGEFVALNAKGLAQ 1015
I D+ YGID WK FL+SLK AISD GK +L EHL+L A CLSATGEFV LNAKG+A+
Sbjct: 1156 IHDIFVVYGIDAGWKYFLNSLKSAISDIGKTVLPEHLLLVASCLSATGEFVGLNAKGMAR 1215
Query: 1014 QRKQTSVSSPFAQACFSNPGDCFIKASKMGVVDNLEGSIDALSWGMIPSIGTGGQFDMLY 835
Q++ TS+SSPF Q CFS+PG CFIKA K V DNL GS+DAL+WG IPS+G+GG FD+LY
Sbjct: 1216 QKELTSISSPFMQGCFSSPGSCFIKAGKRAVADNLHGSLDALAWGKIPSVGSGGHFDILY 1275
Query: 834 SPKGHELANPVEVYDLLGSQIGSLEQNVKIKAPSWHDRMSNKCHTQPLCSYGDIAAKGRK 655
S KGHELA P ++Y LLGSQ EQN+K+K P + + KC Q + + GD A+KG K
Sbjct: 1276 SAKGHELARPEDIYKLLGSQTSCHEQNLKVKVPITCYQTTTKCGAQLVYANGDSASKGCK 1335
Query: 654 NLE-ISLTKLRSVFTLKDIQKLSQELKYMLRKYPVNHQLSDVDKSIAMMALYFHPRRIEK 478
+LE IS + LRS +L DIQKLS+ LK++L+KYP+NHQLS++DK+ MMALYFHPRR EK
Sbjct: 1336 SLEKISKSVLRSFLSLNDIQKLSRRLKFILQKYPINHQLSEIDKTTLMMALYFHPRRDEK 1395
Query: 477 IGTGFQEIKVGYHSKHENTRCFMLVRTDGTVEDFSYHKCVHGALEIIAPHRAKAYQSRWL 298
IG G Q IKV YHSK+ NTRCF LVRTDGT EDFSYHKCVHGALEII P RA++YQSRWL
Sbjct: 1396 IGPGAQNIKVRYHSKYHNTRCFSLVRTDGTEEDFSYHKCVHGALEIIDPRRARSYQSRWL 1455
>emb|CDP09818.1| unnamed protein product [Coffea canephora]
Length = 1511
Score = 472 bits (1215), Expect = e-130
Identities = 233/360 (64%), Positives = 284/360 (78%)
Frame = -2
Query: 1374 DILWKDQPNVSRSHFSSSGELYLRVFMSENCDRTKFWSVLMNNCLQIMDMIDWDRSHPDD 1195
DI+WKD N S+S S G +YLRVFMSE CDRTKFWSVL++NCL+I D+IDW+RSHPDD
Sbjct: 1141 DIMWKDCRNSSKSSKGSLGGVYLRVFMSEKCDRTKFWSVLVDNCLRIRDLIDWERSHPDD 1200
Query: 1194 IRDVSSAYGIDVAWKCFLSSLKFAISDTGKCILSEHLILAADCLSATGEFVALNAKGLAQ 1015
I D++ AYGID A FLSSL AISDTGK IL EHL+L ADCLSATGEFVALNAKGLAQ
Sbjct: 1201 IHDMAPAYGIDAAVNHFLSSLNSAISDTGKTILPEHLVLTADCLSATGEFVALNAKGLAQ 1260
Query: 1014 QRKQTSVSSPFAQACFSNPGDCFIKASKMGVVDNLEGSIDALSWGMIPSIGTGGQFDMLY 835
QRK+T+VSSPF QACFS+PGDCF++A+K G+VDNL+G++DAL+WGM+PSIGTG +FD++Y
Sbjct: 1261 QRKETAVSSPFLQACFSSPGDCFVRAAKTGIVDNLQGTVDALAWGMVPSIGTGARFDIIY 1320
Query: 834 SPKGHELANPVEVYDLLGSQIGSLEQNVKIKAPSWHDRMSNKCHTQPLCSYGDIAAKGRK 655
S KGHE A ++VYDLLGS + N ++K P+ MS K Q L +Y D+A KG
Sbjct: 1321 SGKGHEPAKSIDVYDLLGSIV---NLNQQVKFPNKDYEMSGKSIVQHLFAYDDLATKG-- 1375
Query: 654 NLEISLTKLRSVFTLKDIQKLSQELKYMLRKYPVNHQLSDVDKSIAMMALYFHPRRIEKI 475
+ T LR+ F+LKDIQKLS LK+ML KY V+ QLS++DK+I M AL FHPR EKI
Sbjct: 1376 -CILPRTLLRNFFSLKDIQKLSHSLKHMLNKYDVDCQLSEIDKTIVMAALSFHPRSSEKI 1434
Query: 474 GTGFQEIKVGYHSKHENTRCFMLVRTDGTVEDFSYHKCVHGALEIIAPHRAKAYQSRWLN 295
G G EIKVGYHS+++N+RCF+LVR DGTV DFSYHKCVH AL++IAP AK Y+S+WLN
Sbjct: 1435 GIGAHEIKVGYHSEYDNSRCFVLVRKDGTVADFSYHKCVHNALQLIAPDWAKKYESKWLN 1494
>emb|CBI34757.3| unnamed protein product [Vitis vinifera]
Length = 1359
Score = 470 bits (1210), Expect = e-129
Identities = 229/354 (64%), Positives = 276/354 (77%), Gaps = 1/354 (0%)
Frame = -2
Query: 1329 SSSGELYLRVFMSENCDRTKFWSVLMNNCLQIMDMIDWDRSHPDDIRDVSSAYGIDVAWK 1150
SSSG LYLRV++S +C + FW VLM+ CLQIMDMIDW+RSHPD+I D+ YGID WK
Sbjct: 1000 SSSGRLYLRVYVSGDCGKKNFWGVLMDACLQIMDMIDWERSHPDNIHDIFVVYGIDAGWK 1059
Query: 1149 CFLSSLKFAISDTGKCILSEHLILAADCLSATGEFVALNAKGLAQQRKQTSVSSPFAQAC 970
FL+SLK AISD GK +L EHL+L A CLSATGEFV LNAKG+A+Q++ TS+SSPF Q C
Sbjct: 1060 YFLNSLKSAISDIGKTVLPEHLLLVASCLSATGEFVGLNAKGMARQKELTSISSPFMQGC 1119
Query: 969 FSNPGDCFIKASKMGVVDNLEGSIDALSWGMIPSIGTGGQFDMLYSPKGHELANPVEVYD 790
FS+PG CFIKA K V DNL GS+DAL+WG IPS+G+GG FD+LYS KGHELA P ++Y
Sbjct: 1120 FSSPGSCFIKAGKRAVADNLHGSLDALAWGKIPSVGSGGHFDILYSAKGHELARPEDIYK 1179
Query: 789 LLGSQIGSLEQNVKIKAPSWHDRMSNKCHTQPLCSYGDIAAKGRKNLE-ISLTKLRSVFT 613
LLGSQ EQN+K+K P + + KC Q + + GD A+KG K+LE IS + LRS +
Sbjct: 1180 LLGSQTSCHEQNLKVKVPITCYQTTTKCGAQLVYANGDSASKGCKSLEKISKSVLRSFLS 1239
Query: 612 LKDIQKLSQELKYMLRKYPVNHQLSDVDKSIAMMALYFHPRRIEKIGTGFQEIKVGYHSK 433
L DIQKLS+ LK++L+KYP+NHQLS++DK+ MMALYFHPRR EKIG G Q IKV YHSK
Sbjct: 1240 LNDIQKLSRRLKFILQKYPINHQLSEIDKTTLMMALYFHPRRDEKIGPGAQNIKVRYHSK 1299
Query: 432 HENTRCFMLVRTDGTVEDFSYHKCVHGALEIIAPHRAKAYQSRWLNETM*SNLH 271
+ NTRCF LVRTDGT EDFSYHKCVHGALEII P RA++YQSRWL + NL+
Sbjct: 1300 YHNTRCFSLVRTDGTEEDFSYHKCVHGALEIIDPRRARSYQSRWLPYSEVLNLY 1353
>ref|XP_007040111.1| DNA-directed RNA polymerase II subunit RPB1-B, putative [Theobroma
cacao] gi|508777356|gb|EOY24612.1| DNA-directed RNA
polymerase II subunit RPB1-B, putative [Theobroma cacao]
Length = 1484
Score = 446 bits (1147), Expect = e-122
Identities = 221/360 (61%), Positives = 273/360 (75%), Gaps = 1/360 (0%)
Frame = -2
Query: 1374 DILWKDQPNVSRSHFSSSGELYLRVFMSENCDRTKFWSVLMNNCLQIMDMIDWDRSHPDD 1195
DILWKD+ VS+ H SS GELYLRVF+S + TK W VLMN+CLQIMDMIDW RSHPD+
Sbjct: 1120 DILWKDRLKVSKPHKSSCGELYLRVFVSGDFGITKLWGVLMNDCLQIMDMIDWTRSHPDN 1179
Query: 1194 IRDVSSAYGIDVAWKCFLSSLKFAISDTGKCILSEHLILAADCLSATGEFVALNAKGLAQ 1015
I + AYGID WK FL++LK AISDTGK IL+EHL++ A+CLSATGEFV LN+KGL Q
Sbjct: 1180 INQLCLAYGIDAGWKFFLNNLKSAISDTGKTILNEHLLVVANCLSATGEFVGLNSKGLRQ 1239
Query: 1014 QRKQTSVSSPFAQACFSNPGDCFIKASKMGVVDNLEGSIDALSWGMIPSIGTGGQFDMLY 835
QR+ VSSPF QACFSNP F+KA+K G D+L+G+IDAL+WG IP IGTGGQFD++Y
Sbjct: 1240 QREHAYVSSPFMQACFSNPSASFVKAAKTGASDDLQGTIDALAWGRIPHIGTGGQFDIIY 1299
Query: 834 SPKGHELANPVEVYDLLGSQIGSLEQNVKIKAPSWHDRMSNKCHTQPLCSYGDIAAKGRK 655
S K LA PV+VY LLGS I S +Q+V+ + P + S K + + + GD A++ K
Sbjct: 1300 SVKDQRLAEPVDVYKLLGSSISSQKQDVEFEVPKALNFKSEKYGSLLIDALGDSASEELK 1359
Query: 654 NLEISLTKL-RSVFTLKDIQKLSQELKYMLRKYPVNHQLSDVDKSIAMMALYFHPRRIEK 478
+E + R + TL DIQ+LS+ L+ +L KYP++H+LS+ D + MMALYFHPRR EK
Sbjct: 1360 KIETKRRSIWRELLTLDDIQRLSRALRNILHKYPIDHRLSEADWNTLMMALYFHPRRDEK 1419
Query: 477 IGTGFQEIKVGYHSKHENTRCFMLVRTDGTVEDFSYHKCVHGALEIIAPHRAKAYQSRWL 298
IG+G QEIKVGYH +H N RCF LVRTDGT+ DFSYHKCV GALEIIAPHRAK+Y+S+WL
Sbjct: 1420 IGSGAQEIKVGYHPEHANARCFSLVRTDGTIVDFSYHKCVLGALEIIAPHRAKSYKSKWL 1479
>ref|XP_010053343.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 [Eucalyptus
grandis] gi|702324654|ref|XP_010053344.1| PREDICTED:
DNA-directed RNA polymerase IV subunit 1 [Eucalyptus
grandis] gi|702324662|ref|XP_010053345.1| PREDICTED:
DNA-directed RNA polymerase IV subunit 1 [Eucalyptus
grandis] gi|702324668|ref|XP_010053346.1| PREDICTED:
DNA-directed RNA polymerase IV subunit 1 [Eucalyptus
grandis] gi|702324674|ref|XP_010053347.1| PREDICTED:
DNA-directed RNA polymerase IV subunit 1 [Eucalyptus
grandis] gi|702324680|ref|XP_010053348.1| PREDICTED:
DNA-directed RNA polymerase IV subunit 1 [Eucalyptus
grandis] gi|702324687|ref|XP_010053349.1| PREDICTED:
DNA-directed RNA polymerase IV subunit 1 [Eucalyptus
grandis] gi|629112658|gb|KCW77618.1| hypothetical protein
EUGRSUZ_D01929 [Eucalyptus grandis]
Length = 1473
Score = 439 bits (1130), Expect = e-120
Identities = 212/359 (59%), Positives = 271/359 (75%)
Frame = -2
Query: 1374 DILWKDQPNVSRSHFSSSGELYLRVFMSENCDRTKFWSVLMNNCLQIMDMIDWDRSHPDD 1195
DILW + +S+S S+GELYLRV MS + ++ K WSVLMNNC+ IMD IDW RSHPD+
Sbjct: 1110 DILWSESGKLSKSKPVSTGELYLRVSMSAHSEKMKLWSVLMNNCVPIMDAIDWSRSHPDN 1169
Query: 1194 IRDVSSAYGIDVAWKCFLSSLKFAISDTGKCILSEHLILAADCLSATGEFVALNAKGLAQ 1015
IR+ S A GID WK FL+SL A+SDTGK +L EHL+L A+CLS +GEFV LN KG+++
Sbjct: 1170 IREFSLANGIDAGWKYFLNSLGSAVSDTGKTVLPEHLVLLANCLSTSGEFVGLNPKGMSR 1229
Query: 1014 QRKQTSVSSPFAQACFSNPGDCFIKASKMGVVDNLEGSIDALSWGMIPSIGTGGQFDMLY 835
QR+ +SV+SPF QACFSNPG CFIKA+K G VD+L+GS+DAL+WG +PS+GTGG F+++Y
Sbjct: 1230 QREISSVASPFVQACFSNPGPCFIKAAKAGTVDSLQGSLDALAWGKVPSLGTGGLFEIIY 1289
Query: 834 SPKGHELANPVEVYDLLGSQIGSLEQNVKIKAPSWHDRMSNKCHTQPLCSYGDIAAKGRK 655
S KGHELA P VY+LLG+++ S +QN+K++ P+ + + C + + D +K K
Sbjct: 1290 SGKGHELAKPESVYNLLGNKVSSTQQNIKLEVPNAGSHVPDTCGAEFV--QADSVSKVLK 1347
Query: 654 NLEISLTKLRSVFTLKDIQKLSQELKYMLRKYPVNHQLSDVDKSIAMMALYFHPRRIEKI 475
LEI+ + R T DIQKLS ELK +L KYP++H L + +KSI MMAL FHPR EKI
Sbjct: 1348 KLEINKSLFRKFITFNDIQKLSLELKKILYKYPIDHHLGEQEKSIVMMALKFHPRGKEKI 1407
Query: 474 GTGFQEIKVGYHSKHENTRCFMLVRTDGTVEDFSYHKCVHGALEIIAPHRAKAYQSRWL 298
GTG + IKVG+H KH+++RCFMLVR DG EDFSYHKCV GALEIIAP RAK YQS+WL
Sbjct: 1408 GTGARNIKVGHHPKHQDSRCFMLVRDDGMAEDFSYHKCVLGALEIIAPQRAKTYQSKWL 1466
>ref|XP_009593318.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X2
[Nicotiana tomentosiformis]
Length = 1211
Score = 424 bits (1090), Expect = e-116
Identities = 206/360 (57%), Positives = 271/360 (75%)
Frame = -2
Query: 1374 DILWKDQPNVSRSHFSSSGELYLRVFMSENCDRTKFWSVLMNNCLQIMDMIDWDRSHPDD 1195
DILW++ P+ S+S S+GELYL+VFMSE+CDR FW+ L+++CL IMD+IDW++SHPD+
Sbjct: 840 DILWRELPSTSKSSRGSTGELYLQVFMSESCDRNNFWNALVDSCLHIMDLIDWEQSHPDN 899
Query: 1194 IRDVSSAYGIDVAWKCFLSSLKFAISDTGKCILSEHLILAADCLSATGEFVALNAKGLAQ 1015
+ D++ AYG+DVAWK FL +L A+S+TGK IL EHL+LAADCL+ATGEFV LN KGLAQ
Sbjct: 900 VHDLTVAYGVDVAWKYFLRNLNSAVSETGKKILLEHLVLAADCLTATGEFVPLNTKGLAQ 959
Query: 1014 QRKQTSVSSPFAQACFSNPGDCFIKASKMGVVDNLEGSIDALSWGMIPSIGTGGQFDMLY 835
QRK V SPF QACFS+PGD F++A+K + D+L+GS++AL+WG PS GTG FD++Y
Sbjct: 960 QRKCAGVISPFMQACFSHPGDSFVRAAKTELSDDLQGSLEALAWGKTPSTGTGFSFDIIY 1019
Query: 834 SPKGHELANPVEVYDLLGSQIGSLEQNVKIKAPSWHDRMSNKCHTQPLCSYGDIAAKGRK 655
S KG+E A P +VY LLG+ + S Q VK+ + ++K + LC D+ K K
Sbjct: 1020 SGKGYEPAAPTDVYALLGNHVTSNRQQVKVTLDE-DNETADKALARRLCKLDDLNTKRCK 1078
Query: 654 NLEISLTKLRSVFTLKDIQKLSQELKYMLRKYPVNHQLSDVDKSIAMMALYFHPRRIEKI 475
+ + S+ LRS + DI+KLSQ LK ML KY ++ +LS+ DKSI MMAL+FHPRR EKI
Sbjct: 1079 S-QWSIANLRSFLSFNDIKKLSQALKQMLSKYAIDRELSEADKSIVMMALHFHPRRSEKI 1137
Query: 474 GTGFQEIKVGYHSKHENTRCFMLVRTDGTVEDFSYHKCVHGALEIIAPHRAKAYQSRWLN 295
G G EIK+GYH ++E++RCFMLVRTDGTVEDFSY KC+ ALE+IAP +AK Y +WLN
Sbjct: 1138 GKGAMEIKIGYHKEYEDSRCFMLVRTDGTVEDFSYRKCLQHALELIAPQKAKTY--KWLN 1195
>ref|XP_009593317.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X1
[Nicotiana tomentosiformis]
Length = 1447
Score = 424 bits (1090), Expect = e-116
Identities = 206/360 (57%), Positives = 271/360 (75%)
Frame = -2
Query: 1374 DILWKDQPNVSRSHFSSSGELYLRVFMSENCDRTKFWSVLMNNCLQIMDMIDWDRSHPDD 1195
DILW++ P+ S+S S+GELYL+VFMSE+CDR FW+ L+++CL IMD+IDW++SHPD+
Sbjct: 1076 DILWRELPSTSKSSRGSTGELYLQVFMSESCDRNNFWNALVDSCLHIMDLIDWEQSHPDN 1135
Query: 1194 IRDVSSAYGIDVAWKCFLSSLKFAISDTGKCILSEHLILAADCLSATGEFVALNAKGLAQ 1015
+ D++ AYG+DVAWK FL +L A+S+TGK IL EHL+LAADCL+ATGEFV LN KGLAQ
Sbjct: 1136 VHDLTVAYGVDVAWKYFLRNLNSAVSETGKKILLEHLVLAADCLTATGEFVPLNTKGLAQ 1195
Query: 1014 QRKQTSVSSPFAQACFSNPGDCFIKASKMGVVDNLEGSIDALSWGMIPSIGTGGQFDMLY 835
QRK V SPF QACFS+PGD F++A+K + D+L+GS++AL+WG PS GTG FD++Y
Sbjct: 1196 QRKCAGVISPFMQACFSHPGDSFVRAAKTELSDDLQGSLEALAWGKTPSTGTGFSFDIIY 1255
Query: 834 SPKGHELANPVEVYDLLGSQIGSLEQNVKIKAPSWHDRMSNKCHTQPLCSYGDIAAKGRK 655
S KG+E A P +VY LLG+ + S Q VK+ + ++K + LC D+ K K
Sbjct: 1256 SGKGYEPAAPTDVYALLGNHVTSNRQQVKVTLDE-DNETADKALARRLCKLDDLNTKRCK 1314
Query: 654 NLEISLTKLRSVFTLKDIQKLSQELKYMLRKYPVNHQLSDVDKSIAMMALYFHPRRIEKI 475
+ + S+ LRS + DI+KLSQ LK ML KY ++ +LS+ DKSI MMAL+FHPRR EKI
Sbjct: 1315 S-QWSIANLRSFLSFNDIKKLSQALKQMLSKYAIDRELSEADKSIVMMALHFHPRRSEKI 1373
Query: 474 GTGFQEIKVGYHSKHENTRCFMLVRTDGTVEDFSYHKCVHGALEIIAPHRAKAYQSRWLN 295
G G EIK+GYH ++E++RCFMLVRTDGTVEDFSY KC+ ALE+IAP +AK Y +WLN
Sbjct: 1374 GKGAMEIKIGYHKEYEDSRCFMLVRTDGTVEDFSYRKCLQHALELIAPQKAKTY--KWLN 1431
>ref|XP_009797468.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X2
[Nicotiana sylvestris]
Length = 1254
Score = 423 bits (1088), Expect = e-115
Identities = 206/360 (57%), Positives = 271/360 (75%)
Frame = -2
Query: 1374 DILWKDQPNVSRSHFSSSGELYLRVFMSENCDRTKFWSVLMNNCLQIMDMIDWDRSHPDD 1195
DILW++ P+ S+S S+GELYL+VFMSE+CDR FW+ L+++CL IMD+IDW+ SHPD+
Sbjct: 883 DILWRELPSTSKSSRGSTGELYLQVFMSESCDRNNFWNALVDSCLHIMDLIDWEWSHPDN 942
Query: 1194 IRDVSSAYGIDVAWKCFLSSLKFAISDTGKCILSEHLILAADCLSATGEFVALNAKGLAQ 1015
+ D++ AYG+DVAWK FL +L A+S+TGK IL EHL+LAADCL+ATGEFV LN KGLAQ
Sbjct: 943 VHDLTVAYGVDVAWKYFLRNLNSAVSETGKKILPEHLVLAADCLTATGEFVPLNTKGLAQ 1002
Query: 1014 QRKQTSVSSPFAQACFSNPGDCFIKASKMGVVDNLEGSIDALSWGMIPSIGTGGQFDMLY 835
QRK V SPF QACFS+PGD F++A+K + D+L+GS++AL+WG PS GTG FD++Y
Sbjct: 1003 QRKCAGVISPFMQACFSHPGDSFVRAAKTELSDDLQGSLEALAWGKTPSTGTGFSFDIIY 1062
Query: 834 SPKGHELANPVEVYDLLGSQIGSLEQNVKIKAPSWHDRMSNKCHTQPLCSYGDIAAKGRK 655
S KG+E A P +VY LLG+ + S +Q VK+ + ++K + LC D+ K K
Sbjct: 1063 SGKGYEPAAPTDVYALLGNHVTSNKQQVKVTLDE-DNETADKALARRLCKLDDLNTKRCK 1121
Query: 654 NLEISLTKLRSVFTLKDIQKLSQELKYMLRKYPVNHQLSDVDKSIAMMALYFHPRRIEKI 475
+ + S+ LRS + DI+KLSQ LK ML KY ++ +LS+ DKSI MMAL+FHPRR EKI
Sbjct: 1122 S-QWSIANLRSFLSFNDIKKLSQALKQMLSKYAIDRELSEADKSIVMMALHFHPRRSEKI 1180
Query: 474 GTGFQEIKVGYHSKHENTRCFMLVRTDGTVEDFSYHKCVHGALEIIAPHRAKAYQSRWLN 295
G G EIK+GYH ++E++RCFMLVRTDGTVEDFSY KC+ ALE+IAP +AK Y +WLN
Sbjct: 1181 GKGAMEIKIGYHKEYEDSRCFMLVRTDGTVEDFSYRKCLQHALELIAPQKAKTY--KWLN 1238
>ref|XP_009797463.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X1
[Nicotiana sylvestris] gi|698503797|ref|XP_009797464.1|
PREDICTED: DNA-directed RNA polymerase IV subunit 1
isoform X1 [Nicotiana sylvestris]
gi|698503800|ref|XP_009797465.1| PREDICTED: DNA-directed
RNA polymerase IV subunit 1 isoform X1 [Nicotiana
sylvestris] gi|698503802|ref|XP_009797466.1| PREDICTED:
DNA-directed RNA polymerase IV subunit 1 isoform X1
[Nicotiana sylvestris] gi|698503804|ref|XP_009797467.1|
PREDICTED: DNA-directed RNA polymerase IV subunit 1
isoform X1 [Nicotiana sylvestris]
Length = 1447
Score = 423 bits (1088), Expect = e-115
Identities = 206/360 (57%), Positives = 271/360 (75%)
Frame = -2
Query: 1374 DILWKDQPNVSRSHFSSSGELYLRVFMSENCDRTKFWSVLMNNCLQIMDMIDWDRSHPDD 1195
DILW++ P+ S+S S+GELYL+VFMSE+CDR FW+ L+++CL IMD+IDW+ SHPD+
Sbjct: 1076 DILWRELPSTSKSSRGSTGELYLQVFMSESCDRNNFWNALVDSCLHIMDLIDWEWSHPDN 1135
Query: 1194 IRDVSSAYGIDVAWKCFLSSLKFAISDTGKCILSEHLILAADCLSATGEFVALNAKGLAQ 1015
+ D++ AYG+DVAWK FL +L A+S+TGK IL EHL+LAADCL+ATGEFV LN KGLAQ
Sbjct: 1136 VHDLTVAYGVDVAWKYFLRNLNSAVSETGKKILPEHLVLAADCLTATGEFVPLNTKGLAQ 1195
Query: 1014 QRKQTSVSSPFAQACFSNPGDCFIKASKMGVVDNLEGSIDALSWGMIPSIGTGGQFDMLY 835
QRK V SPF QACFS+PGD F++A+K + D+L+GS++AL+WG PS GTG FD++Y
Sbjct: 1196 QRKCAGVISPFMQACFSHPGDSFVRAAKTELSDDLQGSLEALAWGKTPSTGTGFSFDIIY 1255
Query: 834 SPKGHELANPVEVYDLLGSQIGSLEQNVKIKAPSWHDRMSNKCHTQPLCSYGDIAAKGRK 655
S KG+E A P +VY LLG+ + S +Q VK+ + ++K + LC D+ K K
Sbjct: 1256 SGKGYEPAAPTDVYALLGNHVTSNKQQVKVTLDE-DNETADKALARRLCKLDDLNTKRCK 1314
Query: 654 NLEISLTKLRSVFTLKDIQKLSQELKYMLRKYPVNHQLSDVDKSIAMMALYFHPRRIEKI 475
+ + S+ LRS + DI+KLSQ LK ML KY ++ +LS+ DKSI MMAL+FHPRR EKI
Sbjct: 1315 S-QWSIANLRSFLSFNDIKKLSQALKQMLSKYAIDRELSEADKSIVMMALHFHPRRSEKI 1373
Query: 474 GTGFQEIKVGYHSKHENTRCFMLVRTDGTVEDFSYHKCVHGALEIIAPHRAKAYQSRWLN 295
G G EIK+GYH ++E++RCFMLVRTDGTVEDFSY KC+ ALE+IAP +AK Y +WLN
Sbjct: 1374 GKGAMEIKIGYHKEYEDSRCFMLVRTDGTVEDFSYRKCLQHALELIAPQKAKTY--KWLN 1431
>ref|XP_007210915.1| hypothetical protein PRUPE_ppa000278mg [Prunus persica]
gi|462406650|gb|EMJ12114.1| hypothetical protein
PRUPE_ppa000278mg [Prunus persica]
Length = 1356
Score = 421 bits (1081), Expect = e-114
Identities = 208/361 (57%), Positives = 262/361 (72%), Gaps = 1/361 (0%)
Frame = -2
Query: 1374 DILWKDQPNVSRSHFSSSGELYLRVFMSENCDRTKFWSVLMNNCLQIMDMIDWDRSHPDD 1195
DILW D P S+ SSGELYLRV MS R + WS+LM+NCLQIMD+IDW RSHPD+
Sbjct: 1002 DILWNDHPRESKKIHGSSGELYLRVSMSGKTGRRRLWSMLMDNCLQIMDLIDWSRSHPDN 1061
Query: 1194 IRDVSSAYGIDVAWKCFLSSLKFAISDTGKCILSEHLILAADCLSATGEFVALNAKGLAQ 1015
+ D AYGID WK FL++L+ A +D GK IL +HLIL ADCLSATGEFV LNAKG+AQ
Sbjct: 1062 VHDYCIAYGIDAGWKYFLNNLETAANDIGKDILPQHLILVADCLSATGEFVGLNAKGIAQ 1121
Query: 1014 QRKQTSVSSPFAQACFSNPGDCFIKASKMGVVDNLEGSIDALSWGMIPSIGTGGQFDMLY 835
Q+ TSVSSPF QACFS+PG CFIKA+K GVVD L GS++AL+WG P GTG QFD+LY
Sbjct: 1122 QKGHTSVSSPFVQACFSSPGACFIKAAKGGVVDELHGSVEALAWGNTPPSGTGRQFDILY 1181
Query: 834 SPKGHELANPVEVYDLLGSQIGSLEQNVKIKAPSWHDRMSNKCHTQPLCSYGDIAAKG-R 658
S +G L+ P+ YDLLGSQI S +N + +W++ + +KC D+ + G
Sbjct: 1182 SKEGLNLSKPLNPYDLLGSQISSSRENAFETSKAWNNTL-DKC---------DVTSIGLE 1231
Query: 657 KNLEISLTKLRSVFTLKDIQKLSQELKYMLRKYPVNHQLSDVDKSIAMMALYFHPRRIEK 478
K+ + + +R T+ DIQK +Q LK +LRKY +N L++ DKSI MAL+FHP +++K
Sbjct: 1232 KSESVFKSVIRKYLTINDIQKWTQTLKRILRKYDINESLTEGDKSILKMALHFHPHKVDK 1291
Query: 477 IGTGFQEIKVGYHSKHENTRCFMLVRTDGTVEDFSYHKCVHGALEIIAPHRAKAYQSRWL 298
+G+G Q+IKVG H KHEN RCFMLVR D T EDFSYHKCV GALEI+AP RAK+Y+S+W+
Sbjct: 1292 MGSGVQDIKVGQHPKHENARCFMLVRIDRTEEDFSYHKCVLGALEIVAPERAKSYRSKWM 1351
Query: 297 N 295
N
Sbjct: 1352 N 1352
>ref|XP_012488706.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like [Gossypium
raimondii]
Length = 1485
Score = 420 bits (1080), Expect = e-114
Identities = 207/357 (57%), Positives = 263/357 (73%)
Frame = -2
Query: 1371 ILWKDQPNVSRSHFSSSGELYLRVFMSENCDRTKFWSVLMNNCLQIMDMIDWDRSHPDDI 1192
ILW D+ VS+SH +S GELYLRV ++ +TK W +LMN+CL IMD+IDW RSHPDDI
Sbjct: 1125 ILWNDRFKVSKSHKTSPGELYLRVAVTGGFGKTKLWGMLMNDCLPIMDLIDWTRSHPDDI 1184
Query: 1191 RDVSSAYGIDVAWKCFLSSLKFAISDTGKCILSEHLILAADCLSATGEFVALNAKGLAQQ 1012
SAYGID WK FL++LK AISDTGK IL+EHL L ADCLS TGEFV LN+KGL +
Sbjct: 1185 NQFCSAYGIDSGWKFFLNNLKSAISDTGKTILNEHLHLVADCLSVTGEFVGLNSKGLRLR 1244
Query: 1011 RKQTSVSSPFAQACFSNPGDCFIKASKMGVVDNLEGSIDALSWGMIPSIGTGGQFDMLYS 832
++ VSSPF QACFSNP F+KA+K GV DNL+G+IDALSWG +P IGTG QFD+LYS
Sbjct: 1245 QEHAFVSSPFMQACFSNPSASFVKAAKKGVSDNLQGTIDALSWGRVPCIGTGAQFDILYS 1304
Query: 831 PKGHELANPVEVYDLLGSQIGSLEQNVKIKAPSWHDRMSNKCHTQPLCSYGDIAAKGRKN 652
K + PV+VY+LLG+ +GS Q+V+ + P + S K ++ + + GD A + KN
Sbjct: 1305 MKDEMITEPVDVYNLLGNIVGSQNQDVEFEVPQACNIKSEKYVSELMDALGDSAFERLKN 1364
Query: 651 LEISLTKLRSVFTLKDIQKLSQELKYMLRKYPVNHQLSDVDKSIAMMALYFHPRRIEKIG 472
+E + LR TL DIQ+LS+ LK +L K P+ H+LS D + AMMALYFHPRR EK+G
Sbjct: 1365 IETKI--LREFLTLNDIQRLSRTLKDILHKSPIGHRLSGADWNSAMMALYFHPRRDEKVG 1422
Query: 471 TGFQEIKVGYHSKHENTRCFMLVRTDGTVEDFSYHKCVHGALEIIAPHRAKAYQSRW 301
+G QEIKVGYH +H+N+RCF+L RTDG + DFSYHKCV GALE+IAP + + Y+S+W
Sbjct: 1423 SGAQEIKVGYHPEHKNSRCFLLARTDGAIVDFSYHKCVIGALEVIAPDKVQFYKSKW 1479
>gb|KJB39621.1| hypothetical protein B456_007G022200 [Gossypium raimondii]
Length = 1397
Score = 420 bits (1080), Expect = e-114
Identities = 207/357 (57%), Positives = 263/357 (73%)
Frame = -2
Query: 1371 ILWKDQPNVSRSHFSSSGELYLRVFMSENCDRTKFWSVLMNNCLQIMDMIDWDRSHPDDI 1192
ILW D+ VS+SH +S GELYLRV ++ +TK W +LMN+CL IMD+IDW RSHPDDI
Sbjct: 1037 ILWNDRFKVSKSHKTSPGELYLRVAVTGGFGKTKLWGMLMNDCLPIMDLIDWTRSHPDDI 1096
Query: 1191 RDVSSAYGIDVAWKCFLSSLKFAISDTGKCILSEHLILAADCLSATGEFVALNAKGLAQQ 1012
SAYGID WK FL++LK AISDTGK IL+EHL L ADCLS TGEFV LN+KGL +
Sbjct: 1097 NQFCSAYGIDSGWKFFLNNLKSAISDTGKTILNEHLHLVADCLSVTGEFVGLNSKGLRLR 1156
Query: 1011 RKQTSVSSPFAQACFSNPGDCFIKASKMGVVDNLEGSIDALSWGMIPSIGTGGQFDMLYS 832
++ VSSPF QACFSNP F+KA+K GV DNL+G+IDALSWG +P IGTG QFD+LYS
Sbjct: 1157 QEHAFVSSPFMQACFSNPSASFVKAAKKGVSDNLQGTIDALSWGRVPCIGTGAQFDILYS 1216
Query: 831 PKGHELANPVEVYDLLGSQIGSLEQNVKIKAPSWHDRMSNKCHTQPLCSYGDIAAKGRKN 652
K + PV+VY+LLG+ +GS Q+V+ + P + S K ++ + + GD A + KN
Sbjct: 1217 MKDEMITEPVDVYNLLGNIVGSQNQDVEFEVPQACNIKSEKYVSELMDALGDSAFERLKN 1276
Query: 651 LEISLTKLRSVFTLKDIQKLSQELKYMLRKYPVNHQLSDVDKSIAMMALYFHPRRIEKIG 472
+E + LR TL DIQ+LS+ LK +L K P+ H+LS D + AMMALYFHPRR EK+G
Sbjct: 1277 IETKI--LREFLTLNDIQRLSRTLKDILHKSPIGHRLSGADWNSAMMALYFHPRRDEKVG 1334
Query: 471 TGFQEIKVGYHSKHENTRCFMLVRTDGTVEDFSYHKCVHGALEIIAPHRAKAYQSRW 301
+G QEIKVGYH +H+N+RCF+L RTDG + DFSYHKCV GALE+IAP + + Y+S+W
Sbjct: 1335 SGAQEIKVGYHPEHKNSRCFLLARTDGAIVDFSYHKCVIGALEVIAPDKVQFYKSKW 1391
>ref|XP_006358859.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X2
[Solanum tuberosum]
Length = 1233
Score = 416 bits (1070), Expect = e-113
Identities = 210/361 (58%), Positives = 270/361 (74%), Gaps = 1/361 (0%)
Frame = -2
Query: 1374 DILWKDQPNVSRSHFSSSGELYLRVFMSENCDRTKFWSVLMNNCLQIMDMIDWDRSHPDD 1195
DILWK+ P+ S+S S+GELYL+VFMSE+CDR KFW+ L+++CLQI D+IDW+RS+PDD
Sbjct: 873 DILWKELPSPSKSSRGSTGELYLQVFMSESCDRIKFWNALVDSCLQIRDLIDWERSYPDD 932
Query: 1194 IRDVSSAYGIDVAWKCFLSSLKFAISDTGKCILSEHLILAADCLSATGEFVALNAKGLAQ 1015
+ D++ AYGIDVAW+ FL L A+S+TGK IL EHL+LAAD L+ATGEFV L+AKGL
Sbjct: 933 VHDLTVAYGIDVAWEYFLCKLHSAVSETGKKILPEHLVLAADSLTATGEFVPLSAKGLTL 992
Query: 1014 QRKQTSVSSPFAQACFSNPGDCFIKASKMGVVDNLEGSIDALSWGMIPSIGTGGQFDMLY 835
QRK V SPF QACFSNPGD F++A+KMG+ DNL+GS+++L+WG PSIGTG FD++Y
Sbjct: 993 QRKAAGVISPFMQACFSNPGDSFVRAAKMGLSDNLQGSLESLAWGKTPSIGTGSSFDIIY 1052
Query: 834 SPKGHELANPVEVYDLLGSQIGSLEQNVKIKAPSWHDRMSNKCHTQPLCSYGDIAAKGRK 655
S KG+E A P++VY LL + + S VK+ M K + L D+ K K
Sbjct: 1053 SGKGYEPAEPIDVYTLLQNHVTSGTPKVKVTLDE-DGGMDGKSLARRLDRLDDLNKKSCK 1111
Query: 654 NLEISLTKLRSVFTLKDIQKLSQELKYMLRKYPVNHQLSDVDKSIAMMALYFHPRRIEKI 475
+ E S+TKLRS + DI+KLSQ LK ML KY ++ +L++ DK IAMMAL FHPRR EKI
Sbjct: 1112 S-EWSITKLRSFISFNDIKKLSQSLKQMLSKYAIDRELNEADKCIAMMALQFHPRRNEKI 1170
Query: 474 GTGF-QEIKVGYHSKHENTRCFMLVRTDGTVEDFSYHKCVHGALEIIAPHRAKAYQSRWL 298
G G QEIK+GYH ++E++RCFMLVR+DG+VEDFSY KC+ ALE+IAP +AK SRWL
Sbjct: 1171 GKGAPQEIKIGYHKEYEDSRCFMLVRSDGSVEDFSYRKCMQHALELIAPQKAKT--SRWL 1228
Query: 297 N 295
N
Sbjct: 1229 N 1229
>ref|XP_006358858.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X1
[Solanum tuberosum]
Length = 1446
Score = 416 bits (1070), Expect = e-113
Identities = 210/361 (58%), Positives = 270/361 (74%), Gaps = 1/361 (0%)
Frame = -2
Query: 1374 DILWKDQPNVSRSHFSSSGELYLRVFMSENCDRTKFWSVLMNNCLQIMDMIDWDRSHPDD 1195
DILWK+ P+ S+S S+GELYL+VFMSE+CDR KFW+ L+++CLQI D+IDW+RS+PDD
Sbjct: 1086 DILWKELPSPSKSSRGSTGELYLQVFMSESCDRIKFWNALVDSCLQIRDLIDWERSYPDD 1145
Query: 1194 IRDVSSAYGIDVAWKCFLSSLKFAISDTGKCILSEHLILAADCLSATGEFVALNAKGLAQ 1015
+ D++ AYGIDVAW+ FL L A+S+TGK IL EHL+LAAD L+ATGEFV L+AKGL
Sbjct: 1146 VHDLTVAYGIDVAWEYFLCKLHSAVSETGKKILPEHLVLAADSLTATGEFVPLSAKGLTL 1205
Query: 1014 QRKQTSVSSPFAQACFSNPGDCFIKASKMGVVDNLEGSIDALSWGMIPSIGTGGQFDMLY 835
QRK V SPF QACFSNPGD F++A+KMG+ DNL+GS+++L+WG PSIGTG FD++Y
Sbjct: 1206 QRKAAGVISPFMQACFSNPGDSFVRAAKMGLSDNLQGSLESLAWGKTPSIGTGSSFDIIY 1265
Query: 834 SPKGHELANPVEVYDLLGSQIGSLEQNVKIKAPSWHDRMSNKCHTQPLCSYGDIAAKGRK 655
S KG+E A P++VY LL + + S VK+ M K + L D+ K K
Sbjct: 1266 SGKGYEPAEPIDVYTLLQNHVTSGTPKVKVTLDE-DGGMDGKSLARRLDRLDDLNKKSCK 1324
Query: 654 NLEISLTKLRSVFTLKDIQKLSQELKYMLRKYPVNHQLSDVDKSIAMMALYFHPRRIEKI 475
+ E S+TKLRS + DI+KLSQ LK ML KY ++ +L++ DK IAMMAL FHPRR EKI
Sbjct: 1325 S-EWSITKLRSFISFNDIKKLSQSLKQMLSKYAIDRELNEADKCIAMMALQFHPRRNEKI 1383
Query: 474 GTGF-QEIKVGYHSKHENTRCFMLVRTDGTVEDFSYHKCVHGALEIIAPHRAKAYQSRWL 298
G G QEIK+GYH ++E++RCFMLVR+DG+VEDFSY KC+ ALE+IAP +AK SRWL
Sbjct: 1384 GKGAPQEIKIGYHKEYEDSRCFMLVRSDGSVEDFSYRKCMQHALELIAPQKAKT--SRWL 1441
Query: 297 N 295
N
Sbjct: 1442 N 1442
>ref|XP_011650451.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X3
[Cucumis sativus]
Length = 1361
Score = 415 bits (1067), Expect = e-113
Identities = 211/362 (58%), Positives = 259/362 (71%), Gaps = 1/362 (0%)
Frame = -2
Query: 1374 DILWKDQPNVSRSHFSSSGELYLRVFMSENCDRTKFWSVLMNNCLQIMDMIDWDRSHPDD 1195
DI W D+P V + S GELYLRV MS ++FW+ LMNNCL IMD+IDW RSHPD+
Sbjct: 1000 DITWNDRPKVPKPR-CSHGELYLRVTMSGE-GNSRFWATLMNNCLPIMDLIDWTRSHPDN 1057
Query: 1194 IRDVSSAYGIDVAWKCFLSSLKFAISDTGKCILSEHLILAADCLSATGEFVALNAKGLAQ 1015
+ AYGID WK FL+SL+ A D GK I EHL+L ++ LSATGEFV LN KGL
Sbjct: 1058 THSLCLAYGIDSGWKYFLNSLESATLDVGKTIRLEHLLLVSNSLSATGEFVGLNVKGLTH 1117
Query: 1014 QRKQTSVSSPFAQACFSNPGDCFIKASKMGVVDNLEGSIDALSWGMIPSIGTGGQFDMLY 835
QR+ V +PF QACFS+PG C IKA+K G+ DNL GS+DAL+WG +PS+GTGGQFD+LY
Sbjct: 1118 QREHALVKTPFMQACFSSPGACMIKAAKAGIKDNLSGSLDALAWGRMPSLGTGGQFDILY 1177
Query: 834 SPKGHELANPVEVYDLLGSQIGSLEQNVKIKAPSWHDRMSNKCHTQPLCSYGDIAAKGRK 655
S KGHEL PV+VY+LLG Q +QN KI++ + +S K Q + G KG K
Sbjct: 1178 SGKGHELNKPVDVYNLLGGQSTCEKQNTKIESLD-KNTISEKYSAQLMLKNGGSTIKGLK 1236
Query: 654 NLE-ISLTKLRSVFTLKDIQKLSQELKYMLRKYPVNHQLSDVDKSIAMMALYFHPRRIEK 478
L+ +S + LR TL DIQKLS L+ +L KY +N +L++VDKS MMALYFHP R EK
Sbjct: 1237 RLDSVSKSILRKFLTLNDIQKLSFALRTILHKYSLNERLNEVDKSTLMMALYFHPHRDEK 1296
Query: 477 IGTGFQEIKVGYHSKHENTRCFMLVRTDGTVEDFSYHKCVHGALEIIAPHRAKAYQSRWL 298
IG G Q+IKVG HSK++NTRCF+L+R+DGT EDFSYHKCV GALEIIAPHR K YQS+W+
Sbjct: 1297 IGVGAQDIKVGSHSKYQNTRCFVLIRSDGTTEDFSYHKCVLGALEIIAPHRVKGYQSKWM 1356
Query: 297 NE 292
E
Sbjct: 1357 QE 1358
>ref|XP_011650450.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X2
[Cucumis sativus]
Length = 1362
Score = 415 bits (1067), Expect = e-113
Identities = 211/362 (58%), Positives = 259/362 (71%), Gaps = 1/362 (0%)
Frame = -2
Query: 1374 DILWKDQPNVSRSHFSSSGELYLRVFMSENCDRTKFWSVLMNNCLQIMDMIDWDRSHPDD 1195
DI W D+P V + S GELYLRV MS ++FW+ LMNNCL IMD+IDW RSHPD+
Sbjct: 1001 DITWNDRPKVPKPR-CSHGELYLRVTMSGE-GNSRFWATLMNNCLPIMDLIDWTRSHPDN 1058
Query: 1194 IRDVSSAYGIDVAWKCFLSSLKFAISDTGKCILSEHLILAADCLSATGEFVALNAKGLAQ 1015
+ AYGID WK FL+SL+ A D GK I EHL+L ++ LSATGEFV LN KGL
Sbjct: 1059 THSLCLAYGIDSGWKYFLNSLESATLDVGKTIRLEHLLLVSNSLSATGEFVGLNVKGLTH 1118
Query: 1014 QRKQTSVSSPFAQACFSNPGDCFIKASKMGVVDNLEGSIDALSWGMIPSIGTGGQFDMLY 835
QR+ V +PF QACFS+PG C IKA+K G+ DNL GS+DAL+WG +PS+GTGGQFD+LY
Sbjct: 1119 QREHALVKTPFMQACFSSPGACMIKAAKAGIKDNLSGSLDALAWGRMPSLGTGGQFDILY 1178
Query: 834 SPKGHELANPVEVYDLLGSQIGSLEQNVKIKAPSWHDRMSNKCHTQPLCSYGDIAAKGRK 655
S KGHEL PV+VY+LLG Q +QN KI++ + +S K Q + G KG K
Sbjct: 1179 SGKGHELNKPVDVYNLLGGQSTCEKQNTKIESLD-KNTISEKYSAQLMLKNGGSTIKGLK 1237
Query: 654 NLE-ISLTKLRSVFTLKDIQKLSQELKYMLRKYPVNHQLSDVDKSIAMMALYFHPRRIEK 478
L+ +S + LR TL DIQKLS L+ +L KY +N +L++VDKS MMALYFHP R EK
Sbjct: 1238 RLDSVSKSILRKFLTLNDIQKLSFALRTILHKYSLNERLNEVDKSTLMMALYFHPHRDEK 1297
Query: 477 IGTGFQEIKVGYHSKHENTRCFMLVRTDGTVEDFSYHKCVHGALEIIAPHRAKAYQSRWL 298
IG G Q+IKVG HSK++NTRCF+L+R+DGT EDFSYHKCV GALEIIAPHR K YQS+W+
Sbjct: 1298 IGVGAQDIKVGSHSKYQNTRCFVLIRSDGTTEDFSYHKCVLGALEIIAPHRVKGYQSKWM 1357
Query: 297 NE 292
E
Sbjct: 1358 QE 1359
>ref|XP_011650447.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X1
[Cucumis sativus] gi|778675671|ref|XP_011650448.1|
PREDICTED: DNA-directed RNA polymerase IV subunit 1
isoform X1 [Cucumis sativus]
gi|778675673|ref|XP_011650449.1| PREDICTED: DNA-directed
RNA polymerase IV subunit 1 isoform X1 [Cucumis sativus]
gi|700200830|gb|KGN55963.1| hypothetical protein
Csa_3G039340 [Cucumis sativus]
Length = 1483
Score = 415 bits (1067), Expect = e-113
Identities = 211/362 (58%), Positives = 259/362 (71%), Gaps = 1/362 (0%)
Frame = -2
Query: 1374 DILWKDQPNVSRSHFSSSGELYLRVFMSENCDRTKFWSVLMNNCLQIMDMIDWDRSHPDD 1195
DI W D+P V + S GELYLRV MS ++FW+ LMNNCL IMD+IDW RSHPD+
Sbjct: 1122 DITWNDRPKVPKPR-CSHGELYLRVTMSGE-GNSRFWATLMNNCLPIMDLIDWTRSHPDN 1179
Query: 1194 IRDVSSAYGIDVAWKCFLSSLKFAISDTGKCILSEHLILAADCLSATGEFVALNAKGLAQ 1015
+ AYGID WK FL+SL+ A D GK I EHL+L ++ LSATGEFV LN KGL
Sbjct: 1180 THSLCLAYGIDSGWKYFLNSLESATLDVGKTIRLEHLLLVSNSLSATGEFVGLNVKGLTH 1239
Query: 1014 QRKQTSVSSPFAQACFSNPGDCFIKASKMGVVDNLEGSIDALSWGMIPSIGTGGQFDMLY 835
QR+ V +PF QACFS+PG C IKA+K G+ DNL GS+DAL+WG +PS+GTGGQFD+LY
Sbjct: 1240 QREHALVKTPFMQACFSSPGACMIKAAKAGIKDNLSGSLDALAWGRMPSLGTGGQFDILY 1299
Query: 834 SPKGHELANPVEVYDLLGSQIGSLEQNVKIKAPSWHDRMSNKCHTQPLCSYGDIAAKGRK 655
S KGHEL PV+VY+LLG Q +QN KI++ + +S K Q + G KG K
Sbjct: 1300 SGKGHELNKPVDVYNLLGGQSTCEKQNTKIESLD-KNTISEKYSAQLMLKNGGSTIKGLK 1358
Query: 654 NLE-ISLTKLRSVFTLKDIQKLSQELKYMLRKYPVNHQLSDVDKSIAMMALYFHPRRIEK 478
L+ +S + LR TL DIQKLS L+ +L KY +N +L++VDKS MMALYFHP R EK
Sbjct: 1359 RLDSVSKSILRKFLTLNDIQKLSFALRTILHKYSLNERLNEVDKSTLMMALYFHPHRDEK 1418
Query: 477 IGTGFQEIKVGYHSKHENTRCFMLVRTDGTVEDFSYHKCVHGALEIIAPHRAKAYQSRWL 298
IG G Q+IKVG HSK++NTRCF+L+R+DGT EDFSYHKCV GALEIIAPHR K YQS+W+
Sbjct: 1419 IGVGAQDIKVGSHSKYQNTRCFVLIRSDGTTEDFSYHKCVLGALEIIAPHRVKGYQSKWM 1478
Query: 297 NE 292
E
Sbjct: 1479 QE 1480
>ref|XP_008448971.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase IV
subunit 1 [Cucumis melo]
Length = 1489
Score = 415 bits (1066), Expect = e-113
Identities = 211/362 (58%), Positives = 259/362 (71%), Gaps = 1/362 (0%)
Frame = -2
Query: 1374 DILWKDQPNVSRSHFSSSGELYLRVFMSENCDRTKFWSVLMNNCLQIMDMIDWDRSHPDD 1195
DI W D+P V + S GELYLRV MS ++FW+ L+NNCL IMD+IDW RSHPD+
Sbjct: 1128 DITWNDRPKVPKPR-CSHGELYLRVTMSGE-GNSRFWATLINNCLPIMDLIDWTRSHPDN 1185
Query: 1194 IRDVSSAYGIDVAWKCFLSSLKFAISDTGKCILSEHLILAADCLSATGEFVALNAKGLAQ 1015
+ AYGID WK FL+SL+ A D GK I EHL+L A+ LSATGEFV LN KGL
Sbjct: 1186 THSLCLAYGIDSGWKYFLNSLECATLDIGKTIRLEHLLLVANSLSATGEFVGLNVKGLTH 1245
Query: 1014 QRKQTSVSSPFAQACFSNPGDCFIKASKMGVVDNLEGSIDALSWGMIPSIGTGGQFDMLY 835
QR+ V +PF QACFS+PG C IKA+K G+ DNL GS+DAL+WG +PS+GTGGQFD+LY
Sbjct: 1246 QREHALVKTPFMQACFSSPGACLIKAAKAGIKDNLSGSLDALAWGRMPSLGTGGQFDILY 1305
Query: 834 SPKGHELANPVEVYDLLGSQIGSLEQNVKIKAPSWHDRMSNKCHTQPLCSYGDIAAKGRK 655
S KGHEL PV+VY+LLG Q +QN KI++ + +S K Q + G KG K
Sbjct: 1306 SGKGHELNKPVDVYNLLGGQSTCEKQNAKIESVD-KNNISEKYSAQLVLKNGGSTIKGLK 1364
Query: 654 NLE-ISLTKLRSVFTLKDIQKLSQELKYMLRKYPVNHQLSDVDKSIAMMALYFHPRRIEK 478
L+ +S + LR TL DIQKLS L+ +L KY +N +L++VDKS MMALYFHP R EK
Sbjct: 1365 RLDSVSKSILRKFLTLNDIQKLSFALRTILHKYSLNERLNEVDKSTLMMALYFHPHRDEK 1424
Query: 477 IGTGFQEIKVGYHSKHENTRCFMLVRTDGTVEDFSYHKCVHGALEIIAPHRAKAYQSRWL 298
IG G Q+IKVG HSK++NTRCF+L+R+DGT EDFSYHKCV GALEIIAPHR K YQS+W+
Sbjct: 1425 IGVGAQDIKVGSHSKYQNTRCFVLIRSDGTTEDFSYHKCVLGALEIIAPHRVKGYQSKWM 1484
Query: 297 NE 292
E
Sbjct: 1485 QE 1486