BLASTX nr result
ID: Cornus23_contig00020454
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cornus23_contig00020454
(297 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_005707154.1| 40S ribosomal protein S19e [Galdieria sulphu... 95 2e-17
ref|XP_009496385.1| 30S ribosomal protein S19e [Fonticula alba] ... 93 7e-17
gb|EPZ34940.1| 40S ribosomal protein S19-A [Rozella allomycis CS... 93 7e-17
ref|XP_009270155.1| 40S ribosomal protein S19-A [Wallemia ichthy... 92 1e-16
ref|XP_006960870.1| ribosomal protein S19 [Wallemia mellicola CB... 91 3e-16
emb|CDI55164.1| probable RPS19B-ribosomal protein S19.e, cytosol... 91 4e-16
ref|XP_001768006.1| predicted protein [Physcomitrella patens] gi... 91 4e-16
ref|XP_012760055.1| hypothetical protein SAMD00019534_037090 [Ac... 90 6e-16
ref|XP_009530824.1| hypothetical protein PHYSODRAFT_286607 [Phyt... 90 6e-16
ref|XP_002979359.1| hypothetical protein SELMODRAFT_153225 [Sela... 90 6e-16
dbj|GAK66412.1| 40S ribosomal protein S19 [Pseudozyma antarctica] 90 8e-16
gb|ETS60283.1| hypothetical protein PaG_05834 [Pseudozyma aphidi... 90 8e-16
ref|XP_002903085.1| 40S ribosomal protein S19-3 [Phytophthora in... 89 1e-15
emb|CCF48331.1| probable RPS19B-ribosomal protein S19.e, cytosol... 89 1e-15
emb|CEH19232.1| 40s ribosomal protein s19 [Ceraceosorus bombacis] 89 1e-15
gb|KOS15673.1| 40s ribosomal protein s19 [Malassezia pachydermatis] 89 1e-15
ref|XP_011621086.1| PREDICTED: 40S ribosomal protein S19 isoform... 89 1e-15
ref|XP_011621085.1| PREDICTED: 40S ribosomal protein S19 isoform... 89 1e-15
ref|XP_011621084.1| PREDICTED: 40S ribosomal protein S19-2 isofo... 89 1e-15
ref|XP_011390994.1| ribosomal 40S subunit protein S19 [Ustilago ... 89 1e-15
>ref|XP_005707154.1| 40S ribosomal protein S19e [Galdieria sulphuraria]
gi|452823625|gb|EME30634.1| 40S ribosomal protein S19e
[Galdieria sulphuraria]
Length = 148
Score = 95.1 bits (235), Expect = 2e-17
Identities = 44/71 (61%), Positives = 54/71 (76%)
Frame = -3
Query: 268 RVTKRSVTVRDVPAAEFIAQYAQHLKRSGKIIQPRWVDLVKTSSAAELAPHNPDWFFVRT 89
+ KR TV+DVPAA+FIA YA LKR+G + P WVD VKTS+ ELAP++PDWF+VR
Sbjct: 4 KTVKRGFTVKDVPAADFIASYATFLKRTGSVELPPWVDYVKTSTRNELAPYDPDWFYVRM 63
Query: 88 AALARKIYLNP 56
AALAR+IY P
Sbjct: 64 AALARQIYTRP 74
>ref|XP_009496385.1| 30S ribosomal protein S19e [Fonticula alba]
gi|627946834|gb|KCV68814.1| 30S ribosomal protein S19e
[Fonticula alba]
Length = 139
Score = 93.2 bits (230), Expect = 7e-17
Identities = 41/64 (64%), Positives = 52/64 (81%)
Frame = -3
Query: 250 VTVRDVPAAEFIAQYAQHLKRSGKIIQPRWVDLVKTSSAAELAPHNPDWFFVRTAALARK 71
+TVRDVPA EFI A HLK++G++ P WVD+VKT + ELAP NPDWFF+RTAA+AR+
Sbjct: 1 MTVRDVPAQEFIHALAAHLKKTGQVAVPEWVDIVKTGNNKELAPTNPDWFFIRTAAIARQ 60
Query: 70 IYLN 59
+YLN
Sbjct: 61 LYLN 64
>gb|EPZ34940.1| 40S ribosomal protein S19-A [Rozella allomycis CSF55]
Length = 150
Score = 93.2 bits (230), Expect = 7e-17
Identities = 43/70 (61%), Positives = 56/70 (80%)
Frame = -3
Query: 271 QRVTKRSVTVRDVPAAEFIAQYAQHLKRSGKIIQPRWVDLVKTSSAAELAPHNPDWFFVR 92
+RVT +TV+DVPAA FIA YA HLK+SGK P+WVD+VKT + ELAP++PDW+F+R
Sbjct: 3 ERVTG-GITVKDVPAASFIAAYAAHLKKSGKFDVPKWVDIVKTGAYKELAPYDPDWYFIR 61
Query: 91 TAALARKIYL 62
A++AR IYL
Sbjct: 62 AASVARHIYL 71
>ref|XP_009270155.1| 40S ribosomal protein S19-A [Wallemia ichthyophaga EXF-994]
gi|505754649|gb|EOQ98953.1| 40S ribosomal protein S19-A
[Wallemia ichthyophaga EXF-994]
Length = 154
Score = 92.4 bits (228), Expect = 1e-16
Identities = 44/63 (69%), Positives = 49/63 (77%)
Frame = -3
Query: 250 VTVRDVPAAEFIAQYAQHLKRSGKIIQPRWVDLVKTSSAAELAPHNPDWFFVRTAALARK 71
V VRDV A FI Y+QHLKRSGKI P WVD+VKT S ELAP+NPDW+FVR AA+AR
Sbjct: 2 VNVRDVSAPSFIEAYSQHLKRSGKIEIPNWVDIVKTGSHKELAPYNPDWYFVRAAAVARH 61
Query: 70 IYL 62
IYL
Sbjct: 62 IYL 64
>ref|XP_006960870.1| ribosomal protein S19 [Wallemia mellicola CBS 633.66]
gi|388578747|gb|EIM19086.1| ribosomal protein S19
[Wallemia mellicola CBS 633.66]
Length = 154
Score = 90.9 bits (224), Expect = 3e-16
Identities = 42/63 (66%), Positives = 49/63 (77%)
Frame = -3
Query: 250 VTVRDVPAAEFIAQYAQHLKRSGKIIQPRWVDLVKTSSAAELAPHNPDWFFVRTAALARK 71
V VRDV A FI Y+QHLKRSGKI P WVD+VKT S ELAP+NPDW++VR AA+AR
Sbjct: 2 VNVRDVSAPSFIEAYSQHLKRSGKIEIPNWVDIVKTGSHKELAPYNPDWYYVRAAAVARH 61
Query: 70 IYL 62
+YL
Sbjct: 62 VYL 64
>emb|CDI55164.1| probable RPS19B-ribosomal protein S19.e, cytosolic, partial
[Melanopsichium pennsylvanicum 4]
Length = 214
Score = 90.5 bits (223), Expect = 4e-16
Identities = 49/77 (63%), Positives = 55/77 (71%)
Frame = -3
Query: 292 GAKPQDQQRVTKRSVTVRDVPAAEFIAQYAQHLKRSGKIIQPRWVDLVKTSSAAELAPHN 113
G+KP+ + RS VRDV AA FI YAQHLKRSGKI P WVD+VKT E AP+N
Sbjct: 47 GSKPRSDRL---RSY-VRDVDAATFIDAYAQHLKRSGKIEVPTWVDIVKTGHFKEQAPYN 102
Query: 112 PDWFFVRTAALARKIYL 62
PDWF+VR AALAR IYL
Sbjct: 103 PDWFYVRAAALARHIYL 119
>ref|XP_001768006.1| predicted protein [Physcomitrella patens]
gi|162680848|gb|EDQ67281.1| predicted protein
[Physcomitrella patens]
Length = 142
Score = 90.5 bits (223), Expect = 4e-16
Identities = 40/62 (64%), Positives = 51/62 (82%)
Frame = -3
Query: 247 TVRDVPAAEFIAQYAQHLKRSGKIIQPRWVDLVKTSSAAELAPHNPDWFFVRTAALARKI 68
TV+DVP+ EF+ YA HLKRSGKI P W DLVKT++ ELAP++ DWF++RTA++ARKI
Sbjct: 4 TVKDVPSHEFVRNYAAHLKRSGKIEVPAWADLVKTATFKELAPYDADWFYIRTASMARKI 63
Query: 67 YL 62
YL
Sbjct: 64 YL 65
>ref|XP_012760055.1| hypothetical protein SAMD00019534_037090 [Acytostelium subglobosum
LB1] gi|735994845|dbj|GAM20534.1| hypothetical protein
SAMD00019534_037090 [Acytostelium subglobosum LB1]
Length = 191
Score = 90.1 bits (222), Expect = 6e-16
Identities = 41/67 (61%), Positives = 53/67 (79%)
Frame = -3
Query: 262 TKRSVTVRDVPAAEFIAQYAQHLKRSGKIIQPRWVDLVKTSSAAELAPHNPDWFFVRTAA 83
TK+SVTV+DV +FIA YA+ LKR+G++ PRWVD+VKT++ EL P NPDW +VR A
Sbjct: 43 TKQSVTVKDVAPQDFIAHYAKFLKRTGRVHVPRWVDIVKTATHKELPPINPDWLYVRIAV 102
Query: 82 LARKIYL 62
LARK+YL
Sbjct: 103 LARKVYL 109
>ref|XP_009530824.1| hypothetical protein PHYSODRAFT_286607 [Phytophthora sojae]
gi|348673576|gb|EGZ13395.1| hypothetical protein
PHYSODRAFT_286607 [Phytophthora sojae]
Length = 154
Score = 90.1 bits (222), Expect = 6e-16
Identities = 42/72 (58%), Positives = 56/72 (77%)
Frame = -3
Query: 277 DQQRVTKRSVTVRDVPAAEFIAQYAQHLKRSGKIIQPRWVDLVKTSSAAELAPHNPDWFF 98
D++ VT R VTVRDV A+FI YA+HLKRSGKI P W D+VKT+S E +P +PDW++
Sbjct: 5 DEEEVT-RGVTVRDVKPADFIKAYAEHLKRSGKIELPAWWDVVKTASFKEYSPADPDWYY 63
Query: 97 VRTAALARKIYL 62
+R A++ARK+YL
Sbjct: 64 IRAASIARKVYL 75
>ref|XP_002979359.1| hypothetical protein SELMODRAFT_153225 [Selaginella moellendorffii]
gi|302817314|ref|XP_002990333.1| hypothetical protein
SELMODRAFT_185190 [Selaginella moellendorffii]
gi|300141895|gb|EFJ08602.1| hypothetical protein
SELMODRAFT_185190 [Selaginella moellendorffii]
gi|300153127|gb|EFJ19767.1| hypothetical protein
SELMODRAFT_153225 [Selaginella moellendorffii]
Length = 146
Score = 90.1 bits (222), Expect = 6e-16
Identities = 41/64 (64%), Positives = 51/64 (79%)
Frame = -3
Query: 253 SVTVRDVPAAEFIAQYAQHLKRSGKIIQPRWVDLVKTSSAAELAPHNPDWFFVRTAALAR 74
S TV+DV + EF+ YA HLKRSGK+ P W D+VKTS A ELAP++PDWF+VR A++AR
Sbjct: 5 SKTVKDVSSHEFVRAYAAHLKRSGKVELPPWTDIVKTSVAKELAPYDPDWFYVRAASMAR 64
Query: 73 KIYL 62
KIYL
Sbjct: 65 KIYL 68
>dbj|GAK66412.1| 40S ribosomal protein S19 [Pseudozyma antarctica]
Length = 222
Score = 89.7 bits (221), Expect = 8e-16
Identities = 44/62 (70%), Positives = 48/62 (77%)
Frame = -3
Query: 247 TVRDVPAAEFIAQYAQHLKRSGKIIQPRWVDLVKTSSAAELAPHNPDWFFVRTAALARKI 68
+VRDV AA FI YAQHLKRSGKI P WVD+VKT E AP+NPDWF+VR AALAR I
Sbjct: 67 SVRDVDAATFIDAYAQHLKRSGKIEVPVWVDIVKTGHFKEQAPYNPDWFYVRAAALARHI 126
Query: 67 YL 62
YL
Sbjct: 127 YL 128
>gb|ETS60283.1| hypothetical protein PaG_05834 [Pseudozyma aphidis DSM 70725]
Length = 186
Score = 89.7 bits (221), Expect = 8e-16
Identities = 44/62 (70%), Positives = 48/62 (77%)
Frame = -3
Query: 247 TVRDVPAAEFIAQYAQHLKRSGKIIQPRWVDLVKTSSAAELAPHNPDWFFVRTAALARKI 68
+VRDV AA FI YAQHLKRSGKI P WVD+VKT E AP+NPDWF+VR AALAR I
Sbjct: 31 SVRDVDAATFIDAYAQHLKRSGKIEVPVWVDIVKTGHFKEQAPYNPDWFYVRAAALARHI 90
Query: 67 YL 62
YL
Sbjct: 91 YL 92
>ref|XP_002903085.1| 40S ribosomal protein S19-3 [Phytophthora infestans T30-4]
gi|66270169|gb|AAY43414.1| ribosomal protein S19
[Phytophthora infestans] gi|262097457|gb|EEY55509.1| 40S
ribosomal protein S19-3 [Phytophthora infestans T30-4]
Length = 154
Score = 89.4 bits (220), Expect = 1e-15
Identities = 42/72 (58%), Positives = 55/72 (76%)
Frame = -3
Query: 277 DQQRVTKRSVTVRDVPAAEFIAQYAQHLKRSGKIIQPRWVDLVKTSSAAELAPHNPDWFF 98
D++ V R VTVRDV AEFI YA+HLKRSGKI P W D+VKT+S E +P +PDW++
Sbjct: 5 DEEEVV-RGVTVRDVKPAEFIKAYAEHLKRSGKIELPAWWDVVKTASFKEYSPADPDWYY 63
Query: 97 VRTAALARKIYL 62
+R A++ARK+YL
Sbjct: 64 IRAASIARKVYL 75
>emb|CCF48331.1| probable RPS19B-ribosomal protein S19.e, cytosolic [Ustilago
hordei]
Length = 167
Score = 89.4 bits (220), Expect = 1e-15
Identities = 44/61 (72%), Positives = 47/61 (77%)
Frame = -3
Query: 244 VRDVPAAEFIAQYAQHLKRSGKIIQPRWVDLVKTSSAAELAPHNPDWFFVRTAALARKIY 65
VRDV AA FI YAQHLKRSGKI P WVD+VKT E AP+NPDWF+VR AALAR IY
Sbjct: 4 VRDVDAATFIDAYAQHLKRSGKIEVPVWVDIVKTGHFKEQAPYNPDWFYVRAAALARHIY 63
Query: 64 L 62
L
Sbjct: 64 L 64
>emb|CEH19232.1| 40s ribosomal protein s19 [Ceraceosorus bombacis]
Length = 202
Score = 89.0 bits (219), Expect = 1e-15
Identities = 45/76 (59%), Positives = 51/76 (67%), Gaps = 3/76 (3%)
Frame = -3
Query: 280 QDQQRVTKRS---VTVRDVPAAEFIAQYAQHLKRSGKIIQPRWVDLVKTSSAAELAPHNP 110
QDQ R + + VRDVPA FI YA HLKR+GKI P W D VKT ELAP++P
Sbjct: 24 QDQSRSPQEDHFIMGVRDVPADAFITAYANHLKRAGKIEVPTWADTVKTGKGKELAPYDP 83
Query: 109 DWFFVRTAALARKIYL 62
DWF+VR AALAR IYL
Sbjct: 84 DWFYVRAAALARHIYL 99
>gb|KOS15673.1| 40s ribosomal protein s19 [Malassezia pachydermatis]
Length = 159
Score = 89.0 bits (219), Expect = 1e-15
Identities = 41/61 (67%), Positives = 49/61 (80%)
Frame = -3
Query: 244 VRDVPAAEFIAQYAQHLKRSGKIIQPRWVDLVKTSSAAELAPHNPDWFFVRTAALARKIY 65
VRDV AA+FI YAQHLKRSGK+ P WVD+VKT + E AP++PDW++VR AALAR IY
Sbjct: 4 VRDVDAAQFIHAYAQHLKRSGKLEMPTWVDIVKTGAYKEQAPYDPDWYYVRAAALARHIY 63
Query: 64 L 62
L
Sbjct: 64 L 64
>ref|XP_011621086.1| PREDICTED: 40S ribosomal protein S19 isoform X3 [Amborella
trichopoda]
Length = 137
Score = 89.0 bits (219), Expect = 1e-15
Identities = 39/62 (62%), Positives = 50/62 (80%)
Frame = -3
Query: 247 TVRDVPAAEFIAQYAQHLKRSGKIIQPRWVDLVKTSSAAELAPHNPDWFFVRTAALARKI 68
TV+DV EF+ Y+ HLKRSGKI P+WVDLVKT + ELAP++PDW+F+R A++ARKI
Sbjct: 5 TVKDVSPHEFVKSYSAHLKRSGKIELPKWVDLVKTGTFKELAPYDPDWYFIRAASMARKI 64
Query: 67 YL 62
YL
Sbjct: 65 YL 66
>ref|XP_011621085.1| PREDICTED: 40S ribosomal protein S19 isoform X2 [Amborella
trichopoda]
Length = 141
Score = 89.0 bits (219), Expect = 1e-15
Identities = 39/62 (62%), Positives = 50/62 (80%)
Frame = -3
Query: 247 TVRDVPAAEFIAQYAQHLKRSGKIIQPRWVDLVKTSSAAELAPHNPDWFFVRTAALARKI 68
TV+DV EF+ Y+ HLKRSGKI P+WVDLVKT + ELAP++PDW+F+R A++ARKI
Sbjct: 5 TVKDVSPHEFVKSYSAHLKRSGKIELPKWVDLVKTGTFKELAPYDPDWYFIRAASMARKI 64
Query: 67 YL 62
YL
Sbjct: 65 YL 66
>ref|XP_011621084.1| PREDICTED: 40S ribosomal protein S19-2 isoform X1 [Amborella
trichopoda]
Length = 143
Score = 89.0 bits (219), Expect = 1e-15
Identities = 39/62 (62%), Positives = 50/62 (80%)
Frame = -3
Query: 247 TVRDVPAAEFIAQYAQHLKRSGKIIQPRWVDLVKTSSAAELAPHNPDWFFVRTAALARKI 68
TV+DV EF+ Y+ HLKRSGKI P+WVDLVKT + ELAP++PDW+F+R A++ARKI
Sbjct: 5 TVKDVSPHEFVKSYSAHLKRSGKIELPKWVDLVKTGTFKELAPYDPDWYFIRAASMARKI 64
Query: 67 YL 62
YL
Sbjct: 65 YL 66
>ref|XP_011390994.1| ribosomal 40S subunit protein S19 [Ustilago maydis 521]
gi|757945092|gb|KIS67567.1| ribosomal 40S subunit
protein S19 [Ustilago maydis 521]
Length = 159
Score = 89.0 bits (219), Expect = 1e-15
Identities = 43/61 (70%), Positives = 47/61 (77%)
Frame = -3
Query: 244 VRDVPAAEFIAQYAQHLKRSGKIIQPRWVDLVKTSSAAELAPHNPDWFFVRTAALARKIY 65
VRDV A+ FI YAQHLKRSGKI P WVD+VKT E AP+NPDWF+VR AALAR IY
Sbjct: 4 VRDVDASTFIDAYAQHLKRSGKIEVPTWVDIVKTGHFKEQAPYNPDWFYVRAAALARHIY 63
Query: 64 L 62
L
Sbjct: 64 L 64