BLASTX nr result

ID: Cornus23_contig00020400 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00020400
         (357 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008372462.1| PREDICTED: uncharacterized protein LOC103435...    60   8e-07
ref|XP_008372461.1| PREDICTED: uncharacterized protein LOC103435...    57   7e-06

>ref|XP_008372462.1| PREDICTED: uncharacterized protein LOC103435820 isoform X2 [Malus
           domestica]
          Length = 516

 Score = 59.7 bits (143), Expect = 8e-07
 Identities = 33/88 (37%), Positives = 50/88 (56%), Gaps = 2/88 (2%)
 Frame = -2

Query: 263 MAKCAFVPSRISLHMREDCVKEQCVGPKYSHIH-IHRKHS-GNCKTTQLLSWKVCKLTAS 90
           MA+C   P  + L MR   VKE+   P+ S +  + RK+S G CKT    +W++C+ TA 
Sbjct: 1   MAECLASPLCMKLQMRRSYVKEEGSVPRSSRLQKVQRKYSYGRCKTVPFXTWRMCEFTAX 60

Query: 89  HVANLRVKFCLKETFVKCYCFGTVVNSD 6
            ++N++V     E   KC C G++V SD
Sbjct: 61  GISNVKVG-PFSEASSKCACLGSLVGSD 87


>ref|XP_008372461.1| PREDICTED: uncharacterized protein LOC103435820 isoform X1 [Malus
           domestica]
          Length = 517

 Score = 56.6 bits (135), Expect = 7e-06
 Identities = 33/89 (37%), Positives = 49/89 (55%), Gaps = 3/89 (3%)
 Frame = -2

Query: 263 MAKCAFVPSRISLHMREDCVKEQCVGPKYSHIHI--HRKHS-GNCKTTQLLSWKVCKLTA 93
           MA+C   P  + L MR   VKE+   P+ S +     RK+S G CKT    +W++C+ TA
Sbjct: 1   MAECLASPLCMKLQMRRSYVKEEGSVPRSSRLQKVQSRKYSYGRCKTVPFXTWRMCEFTA 60

Query: 92  SHVANLRVKFCLKETFVKCYCFGTVVNSD 6
             ++N++V     E   KC C G++V SD
Sbjct: 61  XGISNVKVG-PFSEASSKCACLGSLVGSD 88


Top