BLASTX nr result
ID: Cornus23_contig00020318
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cornus23_contig00020318 (1840 letters) Database: ./nr 77,306,371 sequences; 28,104,191,420 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003634352.1| PREDICTED: RNA pseudouridine synthase 2, chl... 597 e-168 ref|XP_010241328.1| PREDICTED: RNA pseudouridine synthase 2, chl... 596 e-167 ref|XP_010241330.1| PREDICTED: RNA pseudouridine synthase 2, chl... 595 e-167 ref|XP_010241329.1| PREDICTED: RNA pseudouridine synthase 2, chl... 595 e-167 ref|XP_009798870.1| PREDICTED: RNA pseudouridine synthase 2, chl... 581 e-163 ref|XP_009620048.1| PREDICTED: RNA pseudouridine synthase 2, chl... 578 e-162 ref|XP_010320443.1| PREDICTED: RNA pseudouridine synthase 2, chl... 577 e-161 ref|XP_004238386.1| PREDICTED: RNA pseudouridine synthase 2, chl... 577 e-161 ref|XP_007017900.1| Pseudouridine synthase family protein isofor... 574 e-160 ref|XP_006342081.1| PREDICTED: RNA pseudouridine synthase 2, chl... 568 e-159 ref|XP_012078835.1| PREDICTED: RNA pseudouridine synthase 2, chl... 565 e-158 gb|KHG01344.1| hypothetical protein F383_22314 [Gossypium arboreum] 564 e-157 ref|XP_012444688.1| PREDICTED: RNA pseudouridine synthase 2, chl... 560 e-156 ref|XP_010320444.1| PREDICTED: RNA pseudouridine synthase 2, chl... 558 e-156 emb|CAN66750.1| hypothetical protein VITISV_034413 [Vitis vinifera] 555 e-155 emb|CDP07347.1| unnamed protein product [Coffea canephora] 553 e-154 ref|XP_002301949.1| pseudouridine synthase family protein [Popul... 553 e-154 ref|XP_006473714.1| PREDICTED: RNA pseudouridine synthase 2, chl... 551 e-154 ref|XP_012829598.1| PREDICTED: RNA pseudouridine synthase 2, chl... 550 e-153 gb|EYU17562.1| hypothetical protein MIMGU_mgv1a006781mg [Erythra... 548 e-153 >ref|XP_003634352.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X1 [Vitis vinifera] gi|302141717|emb|CBI18920.3| unnamed protein product [Vitis vinifera] Length = 433 Score = 597 bits (1540), Expect = e-168 Identities = 309/424 (72%), Positives = 347/424 (81%), Gaps = 3/424 (0%) Frame = -3 Query: 1670 SSSLCFFLRNPRSFSRFPRIIRACSGLAGESASCKSQELPSVRRTNYAGVRLEETI---D 1500 S S F RNP+S SR RI+RACS E S RRTNYAGVRLEET+ + Sbjct: 17 SQSALLFPRNPKSCSRVFRILRACSNSTDEPLVSVSG-----RRTNYAGVRLEETVVDVN 71 Query: 1499 TKSGKLRLDSWISSRITGISRARVQSSIRSGLVSVNGRVIEKVAYMVRDGDKVNCTISEL 1320 + SGKLRLDSWISSRI GISRARVQSSIRSGLVSVN R+++KV++++R GDKVNCTISEL Sbjct: 72 SDSGKLRLDSWISSRIIGISRARVQSSIRSGLVSVNDRIVDKVSHVIRAGDKVNCTISEL 131 Query: 1319 QPLRAEPEDIPLNIVFEDEHVLVVNKPAHMVVHPAPGNATGTLVNGILHHCSLPMVAFPN 1140 QPLRAEPEDIPL+IV+EDEHVLVVNKPAHMVVHPAPGNA+GTLVNGILHHCSLP VA PN Sbjct: 132 QPLRAEPEDIPLDIVYEDEHVLVVNKPAHMVVHPAPGNASGTLVNGILHHCSLPTVALPN 191 Query: 1139 QEVLXXXXXXXXXXXXXXXXEQGRNEGTGFGICEASIRPGIVHRLDKGTSGLLVVAKDEH 960 ++ G+N GT CE +IRPGIVHRLDKGTSGLLVVAKDEH Sbjct: 192 RD----SEEDDISDDEFNSFAAGQNCGT----CETNIRPGIVHRLDKGTSGLLVVAKDEH 243 Query: 959 SHSHLSEQFKKHTIQRVYISLTCGLPSPLSGRIDIPIGRDLSNRIRMVAIPGSNTRGQAR 780 SH+HLSEQFK H+I RVYISLT G+P+PLSGR++IP+GRD +NRIRM A+PG + GQAR Sbjct: 244 SHAHLSEQFKLHSIHRVYISLTSGVPTPLSGRVEIPVGRDPNNRIRMTAVPGPSNSGQAR 303 Query: 779 HAASRYRVIEILAGGGSALVEWRLETGRTHQIRAHAKYLGIPLLGDEVYGGTKCMAMSLL 600 HAASRY+VIEILA GGSALVEWRLETGRTHQIRAHAKYLGIPLLGDEVYGGTK MA+SLL Sbjct: 304 HAASRYKVIEILAAGGSALVEWRLETGRTHQIRAHAKYLGIPLLGDEVYGGTKNMALSLL 363 Query: 599 RTRTPTNFHGQLMQLVSRLERPCLHALALGFRHPYTGENMHFSCLPPVDFAEILSGLREI 420 R R P++ HGQL QLVSRL+RPCLHA+ALGF HP TG+N+HFSC PP DFAEILS LR+I Sbjct: 364 RPRIPSSHHGQLAQLVSRLDRPCLHAVALGFNHPKTGKNVHFSCQPPEDFAEILSWLRKI 423 Query: 419 STEK 408 STEK Sbjct: 424 STEK 427 >ref|XP_010241328.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X1 [Nelumbo nucifera] Length = 471 Score = 596 bits (1537), Expect = e-167 Identities = 304/436 (69%), Positives = 345/436 (79%), Gaps = 1/436 (0%) Frame = -3 Query: 1709 SCTSVISIKALNYSSSLCFFLRNPR-SFSRFPRIIRACSGLAGESASCKSQELPSVRRTN 1533 S +SV S +L SSS R+PR S SRF R++ GESAS P RR N Sbjct: 5 SYSSVPSANSLYNSSSFYLLHRSPRASTSRFFRVLNCSFSSTGESASDYQSSEPQNRRGN 64 Query: 1532 YAGVRLEETIDTKSGKLRLDSWISSRITGISRARVQSSIRSGLVSVNGRVIEKVAYMVRD 1353 +AGV LE+T++ S K R+DSWISSRI GISRARVQSSI+SGLVSVNGR+I+KV++++R Sbjct: 65 FAGVCLEDTVEISSVKSRIDSWISSRIPGISRARVQSSIKSGLVSVNGRIIDKVSHVIRA 124 Query: 1352 GDKVNCTISELQPLRAEPEDIPLNIVFEDEHVLVVNKPAHMVVHPAPGNATGTLVNGILH 1173 GDKVNCTI ELQPLRAEPEDIPL+IV+EDE VLVVNKPAHMVVHPAPGNA GTLVNGILH Sbjct: 125 GDKVNCTIKELQPLRAEPEDIPLDIVYEDESVLVVNKPAHMVVHPAPGNANGTLVNGILH 184 Query: 1172 HCSLPMVAFPNQEVLXXXXXXXXXXXXXXXXEQGRNEGTGFGICEASIRPGIVHRLDKGT 993 HCSLPMVA N +VL QG E ICE S+RPGIVHRLDKGT Sbjct: 185 HCSLPMVALTNSKVLSETDDISDDESDIFSSTQGSMEEVTSNICEVSVRPGIVHRLDKGT 244 Query: 992 SGLLVVAKDEHSHSHLSEQFKKHTIQRVYISLTCGLPSPLSGRIDIPIGRDLSNRIRMVA 813 SGLLVVAKDEHSH+HLSEQFK HTI R+Y+SLTCG+PS SGRI++PIGRDLSNRIRM A Sbjct: 245 SGLLVVAKDEHSHAHLSEQFKLHTINRIYLSLTCGVPSLNSGRIEVPIGRDLSNRIRMAA 304 Query: 812 IPGSNTRGQARHAASRYRVIEILAGGGSALVEWRLETGRTHQIRAHAKYLGIPLLGDEVY 633 +P N+ QARHAASRYRV+E+LAGGGSALVEWRLETGRTHQIRAHAKYLGIPLLGDEVY Sbjct: 305 VPSPNSSRQARHAASRYRVVEVLAGGGSALVEWRLETGRTHQIRAHAKYLGIPLLGDEVY 364 Query: 632 GGTKCMAMSLLRTRTPTNFHGQLMQLVSRLERPCLHALALGFRHPYTGENMHFSCLPPVD 453 GGT+ MA+SLLRTR+ ++FHG L QLVS+L+RPCLHA LGF+HP+TGENM FSC PP D Sbjct: 365 GGTRNMALSLLRTRSHSSFHGDLSQLVSKLQRPCLHAFTLGFKHPHTGENMQFSCPPPAD 424 Query: 452 FAEILSGLREISTEKV 405 F E+LS LR I EKV Sbjct: 425 FTEVLSQLRSIGIEKV 440 >ref|XP_010241330.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X3 [Nelumbo nucifera] Length = 443 Score = 595 bits (1533), Expect = e-167 Identities = 303/435 (69%), Positives = 344/435 (79%), Gaps = 1/435 (0%) Frame = -3 Query: 1709 SCTSVISIKALNYSSSLCFFLRNPR-SFSRFPRIIRACSGLAGESASCKSQELPSVRRTN 1533 S +SV S +L SSS R+PR S SRF R++ GESAS P RR N Sbjct: 5 SYSSVPSANSLYNSSSFYLLHRSPRASTSRFFRVLNCSFSSTGESASDYQSSEPQNRRGN 64 Query: 1532 YAGVRLEETIDTKSGKLRLDSWISSRITGISRARVQSSIRSGLVSVNGRVIEKVAYMVRD 1353 +AGV LE+T++ S K R+DSWISSRI GISRARVQSSI+SGLVSVNGR+I+KV++++R Sbjct: 65 FAGVCLEDTVEISSVKSRIDSWISSRIPGISRARVQSSIKSGLVSVNGRIIDKVSHVIRA 124 Query: 1352 GDKVNCTISELQPLRAEPEDIPLNIVFEDEHVLVVNKPAHMVVHPAPGNATGTLVNGILH 1173 GDKVNCTI ELQPLRAEPEDIPL+IV+EDE VLVVNKPAHMVVHPAPGNA GTLVNGILH Sbjct: 125 GDKVNCTIKELQPLRAEPEDIPLDIVYEDESVLVVNKPAHMVVHPAPGNANGTLVNGILH 184 Query: 1172 HCSLPMVAFPNQEVLXXXXXXXXXXXXXXXXEQGRNEGTGFGICEASIRPGIVHRLDKGT 993 HCSLPMVA N +VL QG E ICE S+RPGIVHRLDKGT Sbjct: 185 HCSLPMVALTNSKVLSETDDISDDESDIFSSTQGSMEEVTSNICEVSVRPGIVHRLDKGT 244 Query: 992 SGLLVVAKDEHSHSHLSEQFKKHTIQRVYISLTCGLPSPLSGRIDIPIGRDLSNRIRMVA 813 SGLLVVAKDEHSH+HLSEQFK HTI R+Y+SLTCG+PS SGRI++PIGRDLSNRIRM A Sbjct: 245 SGLLVVAKDEHSHAHLSEQFKLHTINRIYLSLTCGVPSLNSGRIEVPIGRDLSNRIRMAA 304 Query: 812 IPGSNTRGQARHAASRYRVIEILAGGGSALVEWRLETGRTHQIRAHAKYLGIPLLGDEVY 633 +P N+ QARHAASRYRV+E+LAGGGSALVEWRLETGRTHQIRAHAKYLGIPLLGDEVY Sbjct: 305 VPSPNSSRQARHAASRYRVVEVLAGGGSALVEWRLETGRTHQIRAHAKYLGIPLLGDEVY 364 Query: 632 GGTKCMAMSLLRTRTPTNFHGQLMQLVSRLERPCLHALALGFRHPYTGENMHFSCLPPVD 453 GGT+ MA+SLLRTR+ ++FHG L QLVS+L+RPCLHA LGF+HP+TGENM FSC PP D Sbjct: 365 GGTRNMALSLLRTRSHSSFHGDLSQLVSKLQRPCLHAFTLGFKHPHTGENMQFSCPPPAD 424 Query: 452 FAEILSGLREISTEK 408 F E+LS LR I EK Sbjct: 425 FTEVLSQLRSIGIEK 439 >ref|XP_010241329.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X2 [Nelumbo nucifera] Length = 453 Score = 595 bits (1533), Expect = e-167 Identities = 303/435 (69%), Positives = 344/435 (79%), Gaps = 1/435 (0%) Frame = -3 Query: 1709 SCTSVISIKALNYSSSLCFFLRNPR-SFSRFPRIIRACSGLAGESASCKSQELPSVRRTN 1533 S +SV S +L SSS R+PR S SRF R++ GESAS P RR N Sbjct: 5 SYSSVPSANSLYNSSSFYLLHRSPRASTSRFFRVLNCSFSSTGESASDYQSSEPQNRRGN 64 Query: 1532 YAGVRLEETIDTKSGKLRLDSWISSRITGISRARVQSSIRSGLVSVNGRVIEKVAYMVRD 1353 +AGV LE+T++ S K R+DSWISSRI GISRARVQSSI+SGLVSVNGR+I+KV++++R Sbjct: 65 FAGVCLEDTVEISSVKSRIDSWISSRIPGISRARVQSSIKSGLVSVNGRIIDKVSHVIRA 124 Query: 1352 GDKVNCTISELQPLRAEPEDIPLNIVFEDEHVLVVNKPAHMVVHPAPGNATGTLVNGILH 1173 GDKVNCTI ELQPLRAEPEDIPL+IV+EDE VLVVNKPAHMVVHPAPGNA GTLVNGILH Sbjct: 125 GDKVNCTIKELQPLRAEPEDIPLDIVYEDESVLVVNKPAHMVVHPAPGNANGTLVNGILH 184 Query: 1172 HCSLPMVAFPNQEVLXXXXXXXXXXXXXXXXEQGRNEGTGFGICEASIRPGIVHRLDKGT 993 HCSLPMVA N +VL QG E ICE S+RPGIVHRLDKGT Sbjct: 185 HCSLPMVALTNSKVLSETDDISDDESDIFSSTQGSMEEVTSNICEVSVRPGIVHRLDKGT 244 Query: 992 SGLLVVAKDEHSHSHLSEQFKKHTIQRVYISLTCGLPSPLSGRIDIPIGRDLSNRIRMVA 813 SGLLVVAKDEHSH+HLSEQFK HTI R+Y+SLTCG+PS SGRI++PIGRDLSNRIRM A Sbjct: 245 SGLLVVAKDEHSHAHLSEQFKLHTINRIYLSLTCGVPSLNSGRIEVPIGRDLSNRIRMAA 304 Query: 812 IPGSNTRGQARHAASRYRVIEILAGGGSALVEWRLETGRTHQIRAHAKYLGIPLLGDEVY 633 +P N+ QARHAASRYRV+E+LAGGGSALVEWRLETGRTHQIRAHAKYLGIPLLGDEVY Sbjct: 305 VPSPNSSRQARHAASRYRVVEVLAGGGSALVEWRLETGRTHQIRAHAKYLGIPLLGDEVY 364 Query: 632 GGTKCMAMSLLRTRTPTNFHGQLMQLVSRLERPCLHALALGFRHPYTGENMHFSCLPPVD 453 GGT+ MA+SLLRTR+ ++FHG L QLVS+L+RPCLHA LGF+HP+TGENM FSC PP D Sbjct: 365 GGTRNMALSLLRTRSHSSFHGDLSQLVSKLQRPCLHAFTLGFKHPHTGENMQFSCPPPAD 424 Query: 452 FAEILSGLREISTEK 408 F E+LS LR I EK Sbjct: 425 FTEVLSQLRSIGIEK 439 >ref|XP_009798870.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic [Nicotiana sylvestris] Length = 431 Score = 581 bits (1498), Expect = e-163 Identities = 300/430 (69%), Positives = 352/430 (81%), Gaps = 4/430 (0%) Frame = -3 Query: 1682 ALNYSSSLCFFLRNPRSFSRFPR----IIRACSGLAGESASCKSQELPSVRRTNYAGVRL 1515 ALN S+S+ +NP+ FS F R I RA S G+S S S + RR+NY+GV+L Sbjct: 3 ALN-STSIFVPPQNPKPFS-FSRVSSFIFRAFSKFPGDSDSDDSPSEITGRRSNYSGVKL 60 Query: 1514 EETIDTKSGKLRLDSWISSRITGISRARVQSSIRSGLVSVNGRVIEKVAYMVRDGDKVNC 1335 EET+D K+GKLRLDSW+SSRI GISRARVQSSIRSGLVSVNGRV +KV++ V+ GDKVNC Sbjct: 61 EETVDVKTGKLRLDSWVSSRINGISRARVQSSIRSGLVSVNGRVTDKVSHTVKGGDKVNC 120 Query: 1334 TISELQPLRAEPEDIPLNIVFEDEHVLVVNKPAHMVVHPAPGNATGTLVNGILHHCSLPM 1155 TI++L+PLRAEPEDIPL+IV+ED+HVLVVNKPAHMVVHPAPGNATGTLV+GILHHCSLP Sbjct: 121 TIADLKPLRAEPEDIPLDIVYEDDHVLVVNKPAHMVVHPAPGNATGTLVSGILHHCSLPT 180 Query: 1154 VAFPNQEVLXXXXXXXXXXXXXXXXEQGRNEGTGFGICEASIRPGIVHRLDKGTSGLLVV 975 V+FP +EVL +Q +CE S+RPGIVHRLDKGTSGLLVV Sbjct: 181 VSFPGEEVLSDVEDDSDDELNLFSTDQSPYGVDSSVVCEPSVRPGIVHRLDKGTSGLLVV 240 Query: 974 AKDEHSHSHLSEQFKKHTIQRVYISLTCGLPSPLSGRIDIPIGRDLSNRIRMVAIPGSNT 795 AK E S ++L+EQFKKHTI+RVY+S+TCG+P+ +SGRIDIPIGRD +NRIRM+AIPGS+ Sbjct: 241 AKTEQSLANLAEQFKKHTIKRVYVSITCGVPTSVSGRIDIPIGRDSNNRIRMIAIPGSHK 300 Query: 794 RGQARHAASRYRVIEILAGGGSALVEWRLETGRTHQIRAHAKYLGIPLLGDEVYGGTKCM 615 G+AR+AASRY+VIE LAGGGSALVEWRLETGRTHQIRAHAKYLGIPLLGDEVYGGTK M Sbjct: 301 GGRARNAASRYKVIEKLAGGGSALVEWRLETGRTHQIRAHAKYLGIPLLGDEVYGGTKNM 360 Query: 614 AMSLLRTRTPTNFHGQLMQLVSRLERPCLHALALGFRHPYTGENMHFSCLPPVDFAEILS 435 A+SLL+ +TP HG+L QL+S +ERPCLHAL LGFRHPYTGEN+HF+ LPP DFAE+LS Sbjct: 361 ALSLLQPKTPPRSHGKLSQLISGIERPCLHALTLGFRHPYTGENIHFTRLPPADFAEVLS 420 Query: 434 GLREISTEKV 405 LR ISTEKV Sbjct: 421 ELRAISTEKV 430 >ref|XP_009620048.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic [Nicotiana tomentosiformis] Length = 431 Score = 578 bits (1491), Expect = e-162 Identities = 299/430 (69%), Positives = 351/430 (81%), Gaps = 4/430 (0%) Frame = -3 Query: 1682 ALNYSSSLCFFLRNPRSFSRFPR----IIRACSGLAGESASCKSQELPSVRRTNYAGVRL 1515 ALN S+S+ +NP+ FS F R IIRA S G+S S S + R++NY+GV+L Sbjct: 3 ALN-STSIFVHPQNPKPFS-FSRVSSFIIRAFSKFPGDSDSDDSPDEIQSRKSNYSGVKL 60 Query: 1514 EETIDTKSGKLRLDSWISSRITGISRARVQSSIRSGLVSVNGRVIEKVAYMVRDGDKVNC 1335 EET+D K+GKLRLDSW+SSRI GISRARVQSSIRSGLVSVNGRV +KV++ V+ GDKVNC Sbjct: 61 EETVDIKTGKLRLDSWVSSRIDGISRARVQSSIRSGLVSVNGRVTDKVSHTVKGGDKVNC 120 Query: 1334 TISELQPLRAEPEDIPLNIVFEDEHVLVVNKPAHMVVHPAPGNATGTLVNGILHHCSLPM 1155 TI++L+PLRAEPEDIPL+IV+ED+HVLVVNKPAHMVVHPAPGN TGTLV+GILHHCSLP Sbjct: 121 TIADLKPLRAEPEDIPLDIVYEDDHVLVVNKPAHMVVHPAPGNVTGTLVSGILHHCSLPT 180 Query: 1154 VAFPNQEVLXXXXXXXXXXXXXXXXEQGRNEGTGFGICEASIRPGIVHRLDKGTSGLLVV 975 ++FP +EVL +Q N + E SIRPGIVHRLDKGTSGLLVV Sbjct: 181 ISFPGEEVLSDVEDASGDELNMFSADQSPNGVDASRMYEPSIRPGIVHRLDKGTSGLLVV 240 Query: 974 AKDEHSHSHLSEQFKKHTIQRVYISLTCGLPSPLSGRIDIPIGRDLSNRIRMVAIPGSNT 795 AK E S ++L+EQFKKHTI+RVY+S+TCG+P+ +SGRIDIPIGRD +NRIRMVAIPGS+ Sbjct: 241 AKTEQSLANLAEQFKKHTIKRVYVSITCGVPTSVSGRIDIPIGRDSNNRIRMVAIPGSHK 300 Query: 794 RGQARHAASRYRVIEILAGGGSALVEWRLETGRTHQIRAHAKYLGIPLLGDEVYGGTKCM 615 G+AR+AASRY+VIE LAGGGSALVEWRLETGRTHQIRAHAKYLGIPLLGDEVYGGTK M Sbjct: 301 GGRARNAASRYKVIEKLAGGGSALVEWRLETGRTHQIRAHAKYLGIPLLGDEVYGGTKNM 360 Query: 614 AMSLLRTRTPTNFHGQLMQLVSRLERPCLHALALGFRHPYTGENMHFSCLPPVDFAEILS 435 A+SLL+ +TP HG L QL+S +ERPCLHAL LGFRHPYTGEN+HF+ LPP DFAE+L+ Sbjct: 361 ALSLLQPKTPPRSHGNLSQLISGIERPCLHALTLGFRHPYTGENIHFTRLPPADFAEVLT 420 Query: 434 GLREISTEKV 405 LR ISTEKV Sbjct: 421 ELRAISTEKV 430 >ref|XP_010320443.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X2 [Solanum lycopersicum] Length = 431 Score = 577 bits (1486), Expect = e-161 Identities = 292/429 (68%), Positives = 352/429 (82%), Gaps = 3/429 (0%) Frame = -3 Query: 1682 ALNYSSSLCFFLRNPR--SFSRFPRII-RACSGLAGESASCKSQELPSVRRTNYAGVRLE 1512 ALN ++S +NP+ S SR I RA + G+S S S + RR+NY+GV+LE Sbjct: 3 ALN-TTSFSLLPQNPKPISLSRVSSFICRAFTKFPGDSDSDDSPDEIPGRRSNYSGVKLE 61 Query: 1511 ETIDTKSGKLRLDSWISSRITGISRARVQSSIRSGLVSVNGRVIEKVAYMVRDGDKVNCT 1332 ET+D+K+GKLRLDSW+SSRI G+SRARVQSSIRSGLVSVNGRV +KV++MV+ GDKV+CT Sbjct: 62 ETVDSKTGKLRLDSWVSSRIDGVSRARVQSSIRSGLVSVNGRVTDKVSHMVKGGDKVDCT 121 Query: 1331 ISELQPLRAEPEDIPLNIVFEDEHVLVVNKPAHMVVHPAPGNATGTLVNGILHHCSLPMV 1152 I++L+PLRAEPEDIPL+IV+EDEHVLVVNKPAHMVVHPAPGNATGTLV+GILHHCSLP V Sbjct: 122 IADLKPLRAEPEDIPLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVSGILHHCSLPTV 181 Query: 1151 AFPNQEVLXXXXXXXXXXXXXXXXEQGRNEGTGFGICEASIRPGIVHRLDKGTSGLLVVA 972 +FP +EVL + N +CE+S+RPGIVHRLDKGTSGLLVVA Sbjct: 182 SFPGEEVLSDGEDASDDELNIFSPNRSPNYDDSSVMCESSVRPGIVHRLDKGTSGLLVVA 241 Query: 971 KDEHSHSHLSEQFKKHTIQRVYISLTCGLPSPLSGRIDIPIGRDLSNRIRMVAIPGSNTR 792 K+EHS + L+EQFKKHTI+RVY+S+TCG+P+ ++GR+DIPIGRD +NRIRM AIPG+ Sbjct: 242 KNEHSLADLAEQFKKHTIKRVYVSITCGVPASVAGRVDIPIGRDSNNRIRMAAIPGTPKS 301 Query: 791 GQARHAASRYRVIEILAGGGSALVEWRLETGRTHQIRAHAKYLGIPLLGDEVYGGTKCMA 612 G++RHA SRY+VIE LAGGGSALVEWRLETGRTHQIRAHAK+LGIPL+GDEVYGGTK MA Sbjct: 302 GKSRHAVSRYKVIEKLAGGGSALVEWRLETGRTHQIRAHAKHLGIPLMGDEVYGGTKNMA 361 Query: 611 MSLLRTRTPTNFHGQLMQLVSRLERPCLHALALGFRHPYTGENMHFSCLPPVDFAEILSG 432 +SLL+ +TP FHG+L QLVS+++RPCLHAL LGFRHP+TGEN+HF+ LPP DFAEILS Sbjct: 362 LSLLQPKTPPMFHGELSQLVSQIDRPCLHALTLGFRHPFTGENIHFTRLPPPDFAEILSE 421 Query: 431 LREISTEKV 405 LR I TEKV Sbjct: 422 LRAIKTEKV 430 >ref|XP_004238386.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X1 [Solanum lycopersicum] Length = 436 Score = 577 bits (1486), Expect = e-161 Identities = 292/429 (68%), Positives = 352/429 (82%), Gaps = 3/429 (0%) Frame = -3 Query: 1682 ALNYSSSLCFFLRNPR--SFSRFPRII-RACSGLAGESASCKSQELPSVRRTNYAGVRLE 1512 ALN ++S +NP+ S SR I RA + G+S S S + RR+NY+GV+LE Sbjct: 3 ALN-TTSFSLLPQNPKPISLSRVSSFICRAFTKFPGDSDSDDSPDEIPGRRSNYSGVKLE 61 Query: 1511 ETIDTKSGKLRLDSWISSRITGISRARVQSSIRSGLVSVNGRVIEKVAYMVRDGDKVNCT 1332 ET+D+K+GKLRLDSW+SSRI G+SRARVQSSIRSGLVSVNGRV +KV++MV+ GDKV+CT Sbjct: 62 ETVDSKTGKLRLDSWVSSRIDGVSRARVQSSIRSGLVSVNGRVTDKVSHMVKGGDKVDCT 121 Query: 1331 ISELQPLRAEPEDIPLNIVFEDEHVLVVNKPAHMVVHPAPGNATGTLVNGILHHCSLPMV 1152 I++L+PLRAEPEDIPL+IV+EDEHVLVVNKPAHMVVHPAPGNATGTLV+GILHHCSLP V Sbjct: 122 IADLKPLRAEPEDIPLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVSGILHHCSLPTV 181 Query: 1151 AFPNQEVLXXXXXXXXXXXXXXXXEQGRNEGTGFGICEASIRPGIVHRLDKGTSGLLVVA 972 +FP +EVL + N +CE+S+RPGIVHRLDKGTSGLLVVA Sbjct: 182 SFPGEEVLSDGEDASDDELNIFSPNRSPNYDDSSVMCESSVRPGIVHRLDKGTSGLLVVA 241 Query: 971 KDEHSHSHLSEQFKKHTIQRVYISLTCGLPSPLSGRIDIPIGRDLSNRIRMVAIPGSNTR 792 K+EHS + L+EQFKKHTI+RVY+S+TCG+P+ ++GR+DIPIGRD +NRIRM AIPG+ Sbjct: 242 KNEHSLADLAEQFKKHTIKRVYVSITCGVPASVAGRVDIPIGRDSNNRIRMAAIPGTPKS 301 Query: 791 GQARHAASRYRVIEILAGGGSALVEWRLETGRTHQIRAHAKYLGIPLLGDEVYGGTKCMA 612 G++RHA SRY+VIE LAGGGSALVEWRLETGRTHQIRAHAK+LGIPL+GDEVYGGTK MA Sbjct: 302 GKSRHAVSRYKVIEKLAGGGSALVEWRLETGRTHQIRAHAKHLGIPLMGDEVYGGTKNMA 361 Query: 611 MSLLRTRTPTNFHGQLMQLVSRLERPCLHALALGFRHPYTGENMHFSCLPPVDFAEILSG 432 +SLL+ +TP FHG+L QLVS+++RPCLHAL LGFRHP+TGEN+HF+ LPP DFAEILS Sbjct: 362 LSLLQPKTPPMFHGELSQLVSQIDRPCLHALTLGFRHPFTGENIHFTRLPPPDFAEILSE 421 Query: 431 LREISTEKV 405 LR I TEKV Sbjct: 422 LRAIKTEKV 430 >ref|XP_007017900.1| Pseudouridine synthase family protein isoform 1 [Theobroma cacao] gi|508723228|gb|EOY15125.1| Pseudouridine synthase family protein isoform 1 [Theobroma cacao] Length = 433 Score = 574 bits (1479), Expect = e-160 Identities = 301/446 (67%), Positives = 350/446 (78%), Gaps = 7/446 (1%) Frame = -3 Query: 1724 MLSLHSCTSVISIKALNYSSSLCFFLRNPRSFSRFPRIIR-ACSGL----AGESASCKSQ 1560 M+S +SC S KA S S F R+P+++ SG+ A S+ C ++ Sbjct: 1 MVSSYSCCPFPSTKAFQISPSFVFLS------PRYPKLLPFTLSGILRARARPSSGCAAK 54 Query: 1559 ELPSVRRTNYAGVRLEETID-TKSGKLRLDSWISSRITGISRARVQSSIRSGLVSVNGRV 1383 +R T+Y GV+LEET+D TK GKLRLDSWISSRI GISRARVQSSI+SGLV+VNGRV Sbjct: 55 TQEPIR-TSYTGVQLEETVDGTKQGKLRLDSWISSRIQGISRARVQSSIKSGLVTVNGRV 113 Query: 1382 IEKVAYMVRDGDKVNCTISELQPLRAEPEDIPLNIVFEDEHVLVVNKPAHMVVHPAPGNA 1203 ++KV++ +R GDKVNC ISELQPLRAEPEDIPL+IV+ED+HVLVVNKP HMVVHPAPGNA Sbjct: 114 VDKVSHGLRHGDKVNCVISELQPLRAEPEDIPLDIVYEDDHVLVVNKPPHMVVHPAPGNA 173 Query: 1202 TGTLVNGILHHCSLPMVAFPNQEVLXXXXXXXXXXXXXXXXEQGRNEGTGFGI-CEASIR 1026 TGTLVNGILHHCSLP VA +EVL +EG +G AS+R Sbjct: 174 TGTLVNGILHHCSLPTVALSEKEVLSDTEDVSDD-----------DEGFCYGASAAASVR 222 Query: 1025 PGIVHRLDKGTSGLLVVAKDEHSHSHLSEQFKKHTIQRVYISLTCGLPSPLSGRIDIPIG 846 PGIVHRLDKGTSGLLVVAKDEHSHSHLSEQFK+HTIQRVYISLTCG+PSP +GR+DI IG Sbjct: 223 PGIVHRLDKGTSGLLVVAKDEHSHSHLSEQFKQHTIQRVYISLTCGVPSPSAGRVDISIG 282 Query: 845 RDLSNRIRMVAIPGSNTRGQARHAASRYRVIEILAGGGSALVEWRLETGRTHQIRAHAKY 666 RD +NR+RM+A+PG N G+ARHAASRY+VIE+LAGGGSAL++WRLETGRTHQIRAHAKY Sbjct: 283 RDSNNRVRMIAVPGLNHHGRARHAASRYKVIEVLAGGGSALIQWRLETGRTHQIRAHAKY 342 Query: 665 LGIPLLGDEVYGGTKCMAMSLLRTRTPTNFHGQLMQLVSRLERPCLHALALGFRHPYTGE 486 +GIPLLGDEVYGGTK MA+SLLR RTP N++ QL +LVSRLERP LHAL LGF HP++ E Sbjct: 343 MGIPLLGDEVYGGTKSMALSLLRPRTPPNYNDQLSRLVSRLERPYLHALVLGFEHPHSRE 402 Query: 485 NMHFSCLPPVDFAEILSGLREISTEK 408 MHFSC PP DFAEILS LR+I TEK Sbjct: 403 MMHFSCQPPPDFAEILSDLRKIGTEK 428 >ref|XP_006342081.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic-like [Solanum tuberosum] Length = 431 Score = 568 bits (1465), Expect = e-159 Identities = 289/429 (67%), Positives = 349/429 (81%), Gaps = 3/429 (0%) Frame = -3 Query: 1682 ALNYSSSLCFFLRNPRSFSRF---PRIIRACSGLAGESASCKSQELPSVRRTNYAGVRLE 1512 ALN ++S +NP+ FS I RA + G+S S S + RR+NY+GV+LE Sbjct: 3 ALN-TTSFSLLPQNPKPFSLSRVSSFICRAFTKFPGDSDSDDSPDEIPGRRSNYSGVKLE 61 Query: 1511 ETIDTKSGKLRLDSWISSRITGISRARVQSSIRSGLVSVNGRVIEKVAYMVRDGDKVNCT 1332 ET+D K+GKLRLDSW+SSRI G+SRARVQSSIRSGLVSVNGRV +KV++MV+ GDKV+CT Sbjct: 62 ETVDGKTGKLRLDSWVSSRIDGVSRARVQSSIRSGLVSVNGRVTDKVSHMVKGGDKVDCT 121 Query: 1331 ISELQPLRAEPEDIPLNIVFEDEHVLVVNKPAHMVVHPAPGNATGTLVNGILHHCSLPMV 1152 I++L+PLRAEPEDIPL+IVFEDEHVLVVNKPAHMVVHPAPGNATGTLV+GILHHCSLP + Sbjct: 122 IADLKPLRAEPEDIPLDIVFEDEHVLVVNKPAHMVVHPAPGNATGTLVSGILHHCSLPTI 181 Query: 1151 AFPNQEVLXXXXXXXXXXXXXXXXEQGRNEGTGFGICEASIRPGIVHRLDKGTSGLLVVA 972 +F +EVL + N +CE+S+RPGIVHRLDKGTSGLLVVA Sbjct: 182 SFLGEEVLSDAEDASDDELNVFSGNRSPNYDDSSVMCESSVRPGIVHRLDKGTSGLLVVA 241 Query: 971 KDEHSHSHLSEQFKKHTIQRVYISLTCGLPSPLSGRIDIPIGRDLSNRIRMVAIPGSNTR 792 K+E+S + L+EQFKKHTI+RVY+S+TCG+P+ ++GR+DIPIGRD +NRIRM AIPG+ Sbjct: 242 KNENSLASLAEQFKKHTIKRVYVSITCGVPASVAGRVDIPIGRDSNNRIRMAAIPGTPKS 301 Query: 791 GQARHAASRYRVIEILAGGGSALVEWRLETGRTHQIRAHAKYLGIPLLGDEVYGGTKCMA 612 G++RHA SRY+VIE LA GGSALVEWRLETGRTHQIRAHAKYLGIPL+GDEVYGGTK MA Sbjct: 302 GKSRHAVSRYKVIEKLARGGSALVEWRLETGRTHQIRAHAKYLGIPLMGDEVYGGTKNMA 361 Query: 611 MSLLRTRTPTNFHGQLMQLVSRLERPCLHALALGFRHPYTGENMHFSCLPPVDFAEILSG 432 +SLL+ +TP FHG+L QLVS+++RPCLHAL LGFRHP+TGEN+HF+ LPP DFAEILS Sbjct: 362 LSLLQPKTPPMFHGKLSQLVSQIDRPCLHALTLGFRHPFTGENIHFTRLPPPDFAEILSY 421 Query: 431 LREISTEKV 405 LR I+TEKV Sbjct: 422 LRAINTEKV 430 >ref|XP_012078835.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic [Jatropha curcas] gi|802640486|ref|XP_012078836.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic [Jatropha curcas] Length = 426 Score = 565 bits (1455), Expect = e-158 Identities = 293/440 (66%), Positives = 341/440 (77%) Frame = -3 Query: 1724 MLSLHSCTSVISIKALNYSSSLCFFLRNPRSFSRFPRIIRACSGLAGESASCKSQELPSV 1545 + S+ C S KAL SSS+ FF RNPR F ++R + +G S + Sbjct: 4 LYSVSCCCIGPSAKALQSSSSISFFHRNPRVFPSSKLLLRMFTVCSGSSEKQNQNQ---- 59 Query: 1544 RRTNYAGVRLEETIDTKSGKLRLDSWISSRITGISRARVQSSIRSGLVSVNGRVIEKVAY 1365 R NYAG+RLEET++ KSGKLRLDSWISSRI+GISRARVQSSI+SGLV+VNGRV++KV++ Sbjct: 60 -RINYAGLRLEETVEAKSGKLRLDSWISSRISGISRARVQSSIKSGLVAVNGRVVDKVSH 118 Query: 1364 MVRDGDKVNCTISELQPLRAEPEDIPLNIVFEDEHVLVVNKPAHMVVHPAPGNATGTLVN 1185 V+ GDKV CTISELQPLRAE EDIPL+I++ED+H+LVVNKP HMVVHPAPGN TGTLVN Sbjct: 119 SVKVGDKVICTISELQPLRAEAEDIPLDIIYEDDHLLVVNKPPHMVVHPAPGNPTGTLVN 178 Query: 1184 GILHHCSLPMVAFPNQEVLXXXXXXXXXXXXXXXXEQGRNEGTGFGICEASIRPGIVHRL 1005 GILHHCSLP V +QEVL +EG+ C +S+RPGIVHRL Sbjct: 179 GILHHCSLPTVVTSSQEVLSDVEDISD------------DEGSCSSSCVSSVRPGIVHRL 226 Query: 1004 DKGTSGLLVVAKDEHSHSHLSEQFKKHTIQRVYISLTCGLPSPLSGRIDIPIGRDLSNRI 825 DKGTSGLLVVAKDEH+H+HLSEQFK+HTIQRVYISLT G+PS L+GRIDIPIGRD++NRI Sbjct: 227 DKGTSGLLVVAKDEHAHAHLSEQFKQHTIQRVYISLTSGVPSALTGRIDIPIGRDVNNRI 286 Query: 824 RMVAIPGSNTRGQARHAASRYRVIEILAGGGSALVEWRLETGRTHQIRAHAKYLGIPLLG 645 RM AI G +G ARHAASRY+VIEILAGGGSALVEWRLETGRTHQIRAHAKY+GIPLLG Sbjct: 287 RMAAISGPVKQGHARHAASRYKVIEILAGGGSALVEWRLETGRTHQIRAHAKYIGIPLLG 346 Query: 644 DEVYGGTKCMAMSLLRTRTPTNFHGQLMQLVSRLERPCLHALALGFRHPYTGENMHFSCL 465 DEVYG T MA+SLLR R P +F QL L+S LERPCLHAL+LGF HP TG+ ++FSC Sbjct: 347 DEVYGSTTGMALSLLRPRIPASFQNQLSSLLSGLERPCLHALSLGFTHPRTGKEINFSCP 406 Query: 464 PPVDFAEILSGLREISTEKV 405 PP DFA +LS LRE+ EKV Sbjct: 407 PPPDFAGVLSQLREMDMEKV 426 >gb|KHG01344.1| hypothetical protein F383_22314 [Gossypium arboreum] Length = 446 Score = 564 bits (1453), Expect = e-157 Identities = 301/443 (67%), Positives = 346/443 (78%), Gaps = 3/443 (0%) Frame = -3 Query: 1724 MLSLHSCTSVISIKALNYSSS-LCFFLRNPRSFS-RFPRIIRACSGLAGESASCKSQELP 1551 M+ L++C S KAL S S L RNP+ RI+RA S S S E P Sbjct: 1 MVPLYTCCPFPSSKALQISPSFLLLSSRNPKFLPFTISRILRATS----ISTSAAKHEEP 56 Query: 1550 SVRRTNYAGVRLEETID-TKSGKLRLDSWISSRITGISRARVQSSIRSGLVSVNGRVIEK 1374 + RT+YAGV+LEET+D TK GKLRLDSWISSRI GISRARVQSSI+SGLV VNGRV++K Sbjct: 57 T--RTSYAGVQLEETVDETKQGKLRLDSWISSRIQGISRARVQSSIKSGLVKVNGRVVDK 114 Query: 1373 VAYMVRDGDKVNCTISELQPLRAEPEDIPLNIVFEDEHVLVVNKPAHMVVHPAPGNATGT 1194 V++ +R GDKVNC IS+LQPL+AEPEDIPL+IVFED+HVLVVNKP+HMVVHPAPGNA GT Sbjct: 115 VSHSLRAGDKVNCVISDLQPLKAEPEDIPLDIVFEDDHVLVVNKPSHMVVHPAPGNANGT 174 Query: 1193 LVNGILHHCSLPMVAFPNQEVLXXXXXXXXXXXXXXXXEQGRNEGTGFGICEASIRPGIV 1014 LVNGILHHCSLP VA +EVL G + G AS+RPGIV Sbjct: 175 LVNGILHHCSLPTVASSEKEVLFDTEDMSDDEQDIF---HGASAGA------ASVRPGIV 225 Query: 1013 HRLDKGTSGLLVVAKDEHSHSHLSEQFKKHTIQRVYISLTCGLPSPLSGRIDIPIGRDLS 834 HRLDKGTSGLLVVAKDEHSH+HLSEQFK+HTIQRVYISLTCG+PS +GR+DIPIGRD + Sbjct: 226 HRLDKGTSGLLVVAKDEHSHAHLSEQFKQHTIQRVYISLTCGVPSASAGRVDIPIGRDSN 285 Query: 833 NRIRMVAIPGSNTRGQARHAASRYRVIEILAGGGSALVEWRLETGRTHQIRAHAKYLGIP 654 NRIRMVA+PG + G+ARHAASRY+VIE+LAGGGSALV+WRLETGRTHQIRAHAKY+GIP Sbjct: 286 NRIRMVAVPGLSHHGRARHAASRYKVIEVLAGGGSALVQWRLETGRTHQIRAHAKYMGIP 345 Query: 653 LLGDEVYGGTKCMAMSLLRTRTPTNFHGQLMQLVSRLERPCLHALALGFRHPYTGENMHF 474 LLGDEVYGGTK MA+SLLR RTP ++ +L +LVSRLERP LHAL LGF HP++GE M F Sbjct: 346 LLGDEVYGGTKNMALSLLRPRTPPYYNDELSRLVSRLERPYLHALVLGFEHPHSGEKMRF 405 Query: 473 SCLPPVDFAEILSGLREISTEKV 405 SC PP DF EIL+ LR+I EKV Sbjct: 406 SCPPPPDFGEILNHLRKIGIEKV 428 >ref|XP_012444688.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic [Gossypium raimondii] Length = 432 Score = 560 bits (1443), Expect = e-156 Identities = 300/442 (67%), Positives = 344/442 (77%), Gaps = 3/442 (0%) Frame = -3 Query: 1724 MLSLHSCTSVISIKALNYSSS-LCFFLRNPRSFS-RFPRIIRACSGLAGESASCKSQELP 1551 M+ L++C S KAL S S L RNP+ RI+RA S S S E P Sbjct: 1 MVPLYTCCPFPSSKALQISPSFLLLSSRNPKFLPFTISRILRATS----ISTSATKHEEP 56 Query: 1550 SVRRTNYAGVRLEETID-TKSGKLRLDSWISSRITGISRARVQSSIRSGLVSVNGRVIEK 1374 RT+YAGV+LEET+D TK GKLRLDSWISSRI GISRARVQSSI+SGLV VNGRV++K Sbjct: 57 I--RTSYAGVQLEETVDETKQGKLRLDSWISSRIQGISRARVQSSIKSGLVKVNGRVVDK 114 Query: 1373 VAYMVRDGDKVNCTISELQPLRAEPEDIPLNIVFEDEHVLVVNKPAHMVVHPAPGNATGT 1194 V++ +R GDKV+C IS+LQPL+AEPEDIPL+IVFED+HVLVVNKP+HMVVHPAPGNA GT Sbjct: 115 VSHSLRAGDKVDCVISDLQPLKAEPEDIPLDIVFEDDHVLVVNKPSHMVVHPAPGNANGT 174 Query: 1193 LVNGILHHCSLPMVAFPNQEVLXXXXXXXXXXXXXXXXEQGRNEGTGFGICEASIRPGIV 1014 LVNGILHHCSLP VA +EVL G + G AS+RPGIV Sbjct: 175 LVNGILHHCSLPTVASSEKEVLFDTEDMSDDEQDIF---HGASAGA------ASVRPGIV 225 Query: 1013 HRLDKGTSGLLVVAKDEHSHSHLSEQFKKHTIQRVYISLTCGLPSPLSGRIDIPIGRDLS 834 HRLDKGTSGLLVVAKDE+SH+HLSEQFK+HTIQRVYISLTCG+PS SGR+DIPIGRD + Sbjct: 226 HRLDKGTSGLLVVAKDEYSHAHLSEQFKQHTIQRVYISLTCGVPSAASGRVDIPIGRDSN 285 Query: 833 NRIRMVAIPGSNTRGQARHAASRYRVIEILAGGGSALVEWRLETGRTHQIRAHAKYLGIP 654 NRIRMVA+PG + GQARHAASRY+VIE+LAGGGSALV+WRLETGRTHQIRAHAKY+GIP Sbjct: 286 NRIRMVAVPGLSHHGQARHAASRYKVIEVLAGGGSALVQWRLETGRTHQIRAHAKYMGIP 345 Query: 653 LLGDEVYGGTKCMAMSLLRTRTPTNFHGQLMQLVSRLERPCLHALALGFRHPYTGENMHF 474 LLGDEVYGGTK MA+SLLR RTP ++ +L +LVSRLERP LHAL LGF HP++GE M F Sbjct: 346 LLGDEVYGGTKNMALSLLRPRTPPYYNDELSRLVSRLERPYLHALVLGFEHPHSGEKMRF 405 Query: 473 SCLPPVDFAEILSGLREISTEK 408 SC PP DF EIL+ LR+I EK Sbjct: 406 SCPPPPDFGEILNHLRKIGIEK 427 >ref|XP_010320444.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X3 [Solanum lycopersicum] Length = 430 Score = 558 bits (1439), Expect = e-156 Identities = 286/429 (66%), Positives = 346/429 (80%), Gaps = 3/429 (0%) Frame = -3 Query: 1682 ALNYSSSLCFFLRNPR--SFSRFPRII-RACSGLAGESASCKSQELPSVRRTNYAGVRLE 1512 ALN ++S +NP+ S SR I RA + G+S S S + RR+NY+GV+LE Sbjct: 3 ALN-TTSFSLLPQNPKPISLSRVSSFICRAFTKFPGDSDSDDSPDEIPGRRSNYSGVKLE 61 Query: 1511 ETIDTKSGKLRLDSWISSRITGISRARVQSSIRSGLVSVNGRVIEKVAYMVRDGDKVNCT 1332 ET+D+K+GKLRLDSW+SSRI G+SRARVQSSIRSGLVSVNGRV +KV++MV+ GDKV+CT Sbjct: 62 ETVDSKTGKLRLDSWVSSRIDGVSRARVQSSIRSGLVSVNGRVTDKVSHMVKGGDKVDCT 121 Query: 1331 ISELQPLRAEPEDIPLNIVFEDEHVLVVNKPAHMVVHPAPGNATGTLVNGILHHCSLPMV 1152 I++L+PLRAEPEDIPL+IV+EDEHVLVVNKPAHMVVHPAPGNATGTLV+GILHHCSLP V Sbjct: 122 IADLKPLRAEPEDIPLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVSGILHHCSLPTV 181 Query: 1151 AFPNQEVLXXXXXXXXXXXXXXXXEQGRNEGTGFGICEASIRPGIVHRLDKGTSGLLVVA 972 +FP +EVL + N +CE+S+RPGIVHRLDKGTSGLLVVA Sbjct: 182 SFPGEEVLSDGEDASDDELNIFSPNRSPNYDDSSVMCESSVRPGIVHRLDKGTSGLLVVA 241 Query: 971 KDEHSHSHLSEQFKKHTIQRVYISLTCGLPSPLSGRIDIPIGRDLSNRIRMVAIPGSNTR 792 K+EHS + L+EQFKKHTI+RVY+S+TCG+P+ ++GR+DIPIGRD +NRIRM AIPG+ Sbjct: 242 KNEHSLADLAEQFKKHTIKRVYVSITCGVPASVAGRVDIPIGRDSNNRIRMAAIPGTPKS 301 Query: 791 GQARHAASRYRVIEILAGGGSALVEWRLETGRTHQIRAHAKYLGIPLLGDEVYGGTKCMA 612 G++RHA SRY+VIE LAGGGSALVEWRLETGRTHQ +LGIPL+GDEVYGGTK MA Sbjct: 302 GKSRHAVSRYKVIEKLAGGGSALVEWRLETGRTHQ------HLGIPLMGDEVYGGTKNMA 355 Query: 611 MSLLRTRTPTNFHGQLMQLVSRLERPCLHALALGFRHPYTGENMHFSCLPPVDFAEILSG 432 +SLL+ +TP FHG+L QLVS+++RPCLHAL LGFRHP+TGEN+HF+ LPP DFAEILS Sbjct: 356 LSLLQPKTPPMFHGELSQLVSQIDRPCLHALTLGFRHPFTGENIHFTRLPPPDFAEILSE 415 Query: 431 LREISTEKV 405 LR I TEKV Sbjct: 416 LRAIKTEKV 424 >emb|CAN66750.1| hypothetical protein VITISV_034413 [Vitis vinifera] Length = 611 Score = 555 bits (1430), Expect = e-155 Identities = 298/452 (65%), Positives = 338/452 (74%), Gaps = 30/452 (6%) Frame = -3 Query: 1667 SSLCFFLRNPRSFSRFPRIIRACSGLAGESASCKSQELPSVRRTNYAGVRLEETI---DT 1497 +S+ F RNP+S SR RI+R CS E S RRTNYAGVRLEET+ ++ Sbjct: 147 NSVLLFPRNPKSCSRVFRILRDCSNSTDEPLVSVSS-----RRTNYAGVRLEETVVDVNS 201 Query: 1496 KSGKLRLDSWISSRITGISRARVQSSIRSGLVSVNGRVIEK------------------- 1374 SGKLRLDSWISSRI GISRARVQSSIRSGLVSVN R+++K Sbjct: 202 DSGKLRLDSWISSRIIGISRARVQSSIRSGLVSVNDRIVDKAMLVSRKFEVGEGKKIEEK 261 Query: 1373 --------VAYMVRDGDKVNCTISELQPLRAEPEDIPLNIVFEDEHVLVVNKPAHMVVHP 1218 V++++R GDKVNCTISELQPLRAEPEDIPL+IV+EDEHV VHP Sbjct: 262 DPITYSEQVSHVIRAGDKVNCTISELQPLRAEPEDIPLDIVYEDEHV----------VHP 311 Query: 1217 APGNATGTLVNGILHHCSLPMVAFPNQEVLXXXXXXXXXXXXXXXXEQGRNEGTGFGICE 1038 APGNA+GTLVNGILHHCSLP VA PN++ G+N GT CE Sbjct: 312 APGNASGTLVNGILHHCSLPTVALPNRD----SEEDDILDDEFNSFAAGQNCGT----CE 363 Query: 1037 ASIRPGIVHRLDKGTSGLLVVAKDEHSHSHLSEQFKKHTIQRVYISLTCGLPSPLSGRID 858 +IRPGIVHRLDKGTSGLLVVAKDEHSH+HLSEQFK H+I RVYISLT G+P+PLSGR++ Sbjct: 364 TNIRPGIVHRLDKGTSGLLVVAKDEHSHAHLSEQFKLHSIHRVYISLTSGVPTPLSGRVE 423 Query: 857 IPIGRDLSNRIRMVAIPGSNTRGQARHAASRYRVIEILAGGGSALVEWRLETGRTHQIRA 678 IP+GRD +NRIRM A+PG + GQARHAASRY+VIEILA GGSALVEWRLETGRTHQIRA Sbjct: 424 IPVGRDPNNRIRMTAVPGPSNSGQARHAASRYKVIEILAAGGSALVEWRLETGRTHQIRA 483 Query: 677 HAKYLGIPLLGDEVYGGTKCMAMSLLRTRTPTNFHGQLMQLVSRLERPCLHALALGFRHP 498 HAKYLGIPLLGDEVYGGTK MA+SLLR R P++ HGQL QLVSRL+RPCLHA+ALGF HP Sbjct: 484 HAKYLGIPLLGDEVYGGTKNMALSLLRPRIPSSHHGQLAQLVSRLDRPCLHAVALGFNHP 543 Query: 497 YTGENMHFSCLPPVDFAEILSGLREISTEKVH 402 TG+N+HFSC PP DFAEILS LR+ISTEK H Sbjct: 544 KTGKNVHFSCQPPEDFAEILSWLRKISTEKRH 575 >emb|CDP07347.1| unnamed protein product [Coffea canephora] Length = 442 Score = 553 bits (1425), Expect = e-154 Identities = 284/441 (64%), Positives = 338/441 (76%), Gaps = 2/441 (0%) Frame = -3 Query: 1721 LSLHSCTSVISIKALNYSSSLCFFLRNPRSFSRFPRII--RACSGLAGESASCKSQELPS 1548 L+ S TS+ S KAL + P S R++ +AC+ AG + Q + Sbjct: 6 LNTISWTSLPSTKALKN------IIPKPLSVISLSRLVNVKACTTSAGGNP----QPISD 55 Query: 1547 VRRTNYAGVRLEETIDTKSGKLRLDSWISSRITGISRARVQSSIRSGLVSVNGRVIEKVA 1368 R N++GV+L+ET+D KS KLRLDSW+SSRI GISRARVQSSIRSGLVSVNGR+I KV+ Sbjct: 56 RRTINFSGVKLQETVDVKSEKLRLDSWVSSRIHGISRARVQSSIRSGLVSVNGRIINKVS 115 Query: 1367 YMVRDGDKVNCTISELQPLRAEPEDIPLNIVFEDEHVLVVNKPAHMVVHPAPGNATGTLV 1188 +MVR GDKVNCTISELQ LRAEPEDIPL+IV+ED+H+LVVNKPAHMVVHPAPGN +GTLV Sbjct: 116 HMVRGGDKVNCTISELQQLRAEPEDIPLDIVYEDDHLLVVNKPAHMVVHPAPGNTSGTLV 175 Query: 1187 NGILHHCSLPMVAFPNQEVLXXXXXXXXXXXXXXXXEQGRNEGTGFGICEASIRPGIVHR 1008 NGILHHCSLPM++ ++EV N G EASIRPGIVHR Sbjct: 176 NGILHHCSLPMLSLASEEVHLEPEDASDDEFIAFPRAPKDNGGASSRTSEASIRPGIVHR 235 Query: 1007 LDKGTSGLLVVAKDEHSHSHLSEQFKKHTIQRVYISLTCGLPSPLSGRIDIPIGRDLSNR 828 LDKGTSGLLVVAKDEHSHSHL+EQFK TI+RVY+SLTCG+PSP+SGR+DIP+GRD +NR Sbjct: 236 LDKGTSGLLVVAKDEHSHSHLAEQFKNRTIKRVYVSLTCGVPSPVSGRVDIPVGRDSNNR 295 Query: 827 IRMVAIPGSNTRGQARHAASRYRVIEILAGGGSALVEWRLETGRTHQIRAHAKYLGIPLL 648 IRM GS + R+AASRY V+E+LAGGGSALVEW+LETGRTHQIR HAKY+G+PL+ Sbjct: 296 IRMAVFDGSTHSQKTRNAASRYSVVEVLAGGGSALVEWKLETGRTHQIRVHAKYMGVPLM 355 Query: 647 GDEVYGGTKCMAMSLLRTRTPTNFHGQLMQLVSRLERPCLHALALGFRHPYTGENMHFSC 468 GDE+YGGTK MA+SLL+ RTP++F L QL+ +LERPCLHAL+LGF HPYT ENMHFS Sbjct: 356 GDELYGGTKGMALSLLQPRTPSSFRENLQQLICKLERPCLHALSLGFTHPYTLENMHFSQ 415 Query: 467 LPPVDFAEILSGLREISTEKV 405 +PP DFAEIL+ LR+I EKV Sbjct: 416 MPPADFAEILTQLRDIRAEKV 436 >ref|XP_002301949.1| pseudouridine synthase family protein [Populus trichocarpa] gi|222843675|gb|EEE81222.1| pseudouridine synthase family protein [Populus trichocarpa] Length = 444 Score = 553 bits (1424), Expect = e-154 Identities = 292/431 (67%), Positives = 344/431 (79%) Frame = -3 Query: 1697 VISIKALNYSSSLCFFLRNPRSFSRFPRIIRACSGLAGESASCKSQELPSVRRTNYAGVR 1518 ++SI +++ S+ FFL S+ P R + + + S + P +R NY+GV+ Sbjct: 30 MLSISSVSRCSAPSFFL------SQKPTASRLLTVHSSSTREPNSNQNPG-QRINYSGVK 82 Query: 1517 LEETIDTKSGKLRLDSWISSRITGISRARVQSSIRSGLVSVNGRVIEKVAYMVRDGDKVN 1338 LEE++D+KSGK RLDSWISSRI+GISRARVQSSI+SGLVSVNG+VI+KV++ V+ GDKVN Sbjct: 83 LEESVDSKSGKSRLDSWISSRISGISRARVQSSIKSGLVSVNGKVIDKVSHNVKAGDKVN 142 Query: 1337 CTISELQPLRAEPEDIPLNIVFEDEHVLVVNKPAHMVVHPAPGNATGTLVNGILHHCSLP 1158 C ISELQPLRAEPE+IPL+IV+EDE+VLVVNKPAHMVVHPAPGNATGTLVNGILHHCSLP Sbjct: 143 CVISELQPLRAEPENIPLDIVYEDENVLVVNKPAHMVVHPAPGNATGTLVNGILHHCSLP 202 Query: 1157 MVAFPNQEVLXXXXXXXXXXXXXXXXEQGRNEGTGFGICEASIRPGIVHRLDKGTSGLLV 978 V+ +QEVL +EG AS+RPGIVHRLDKGTSGLLV Sbjct: 203 TVS--SQEVL----------SGAEDVSDDDDEGLCSSSYAASVRPGIVHRLDKGTSGLLV 250 Query: 977 VAKDEHSHSHLSEQFKKHTIQRVYISLTCGLPSPLSGRIDIPIGRDLSNRIRMVAIPGSN 798 VAKDEHSH+HLSEQFK HTI+RVY+SLTCG+P+P++GRID+PIGRD+SNRIRM AI N Sbjct: 251 VAKDEHSHAHLSEQFKLHTIKRVYVSLTCGVPAPMAGRIDVPIGRDVSNRIRMAAIVEPN 310 Query: 797 TRGQARHAASRYRVIEILAGGGSALVEWRLETGRTHQIRAHAKYLGIPLLGDEVYGGTKC 618 RGQARHAASRY+VIEILAGGGSALVEWRLETGRTHQIRAHAKY+GIPLLGDEVYGGT+ Sbjct: 311 -RGQARHAASRYKVIEILAGGGSALVEWRLETGRTHQIRAHAKYIGIPLLGDEVYGGTQN 369 Query: 617 MAMSLLRTRTPTNFHGQLMQLVSRLERPCLHALALGFRHPYTGENMHFSCLPPVDFAEIL 438 MA+SLLR+RT + H QL +S LERPCLHALALGF HP TG+ +HFSC PP DF EIL Sbjct: 370 MALSLLRSRTQPSCHRQLSLSLSGLERPCLHALALGFTHPCTGKEIHFSCPPPPDFTEIL 429 Query: 437 SGLREISTEKV 405 S LRE+ TEK+ Sbjct: 430 SQLREMGTEKL 440 >ref|XP_006473714.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic-like [Citrus sinensis] Length = 421 Score = 551 bits (1419), Expect = e-154 Identities = 280/377 (74%), Positives = 314/377 (83%) Frame = -3 Query: 1535 NYAGVRLEETIDTKSGKLRLDSWISSRITGISRARVQSSIRSGLVSVNGRVIEKVAYMVR 1356 NYAGV+LEET+DTK+GKLRLD+WISSRI GISRARVQSSIRSGLVS+NG+V+ KV++ V+ Sbjct: 54 NYAGVQLEETVDTKAGKLRLDAWISSRIDGISRARVQSSIRSGLVSINGQVVSKVSHNVK 113 Query: 1355 DGDKVNCTISELQPLRAEPEDIPLNIVFEDEHVLVVNKPAHMVVHPAPGNATGTLVNGIL 1176 GD VNCTISELQPLRAE EDIPL+IV+ED++VLVVNKPAHMVVHPAPGNATGTLVNGIL Sbjct: 114 GGDMVNCTISELQPLRAEAEDIPLDIVYEDDNVLVVNKPAHMVVHPAPGNATGTLVNGIL 173 Query: 1175 HHCSLPMVAFPNQEVLXXXXXXXXXXXXXXXXEQGRNEGTGFGICEASIRPGIVHRLDKG 996 HHCSLP +A NQE +E I ASIRPGIVHRLDKG Sbjct: 174 HHCSLPTLASSNQEAFSDAEDISD------------DEEFSSSISGASIRPGIVHRLDKG 221 Query: 995 TSGLLVVAKDEHSHSHLSEQFKKHTIQRVYISLTCGLPSPLSGRIDIPIGRDLSNRIRMV 816 TSGLLVVAKDEHSH+HLSEQFK HTI+RVYISLT G+PS SGRI++PI RD +NRIRM Sbjct: 222 TSGLLVVAKDEHSHAHLSEQFKLHTIERVYISLTSGVPSQSSGRIEVPISRDPNNRIRMA 281 Query: 815 AIPGSNTRGQARHAASRYRVIEILAGGGSALVEWRLETGRTHQIRAHAKYLGIPLLGDEV 636 AIPGSN GQARHAASRY+VIEILAGGGSALVEWRLETGRTHQIRAHAKY+GIPLLGDEV Sbjct: 282 AIPGSNKHGQARHAASRYKVIEILAGGGSALVEWRLETGRTHQIRAHAKYMGIPLLGDEV 341 Query: 635 YGGTKCMAMSLLRTRTPTNFHGQLMQLVSRLERPCLHALALGFRHPYTGENMHFSCLPPV 456 YGGTK MA SLL+ RT HG++++LVS L+RPCLHA+ALGF HP+T E + FSC PP Sbjct: 342 YGGTKNMAKSLLQPRTAPGSHGKVLKLVSGLQRPCLHAVALGFTHPHTREKIQFSCPPPA 401 Query: 455 DFAEILSGLREISTEKV 405 DFAEILS LREI TEK+ Sbjct: 402 DFAEILSQLREIGTEKL 418 >ref|XP_012829598.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X1 [Erythranthe guttatus] gi|604297299|gb|EYU17563.1| hypothetical protein MIMGU_mgv1a006781mg [Erythranthe guttata] Length = 422 Score = 550 bits (1416), Expect = e-153 Identities = 289/436 (66%), Positives = 347/436 (79%), Gaps = 5/436 (1%) Frame = -3 Query: 1697 VISIKALNYSSSLCFFLRNPRSFSRFPRIIRACSGL-----AGESASCKSQELPSVRRTN 1533 ++S+++LN+SS F + NPR+ F R++ S A S S SQ+ S R N Sbjct: 1 MLSLQSLNWSSIKPFPI-NPRN-PAFWRLLSTSSAYPDSIPADYSDSDDSQDSISGRPNN 58 Query: 1532 YAGVRLEETIDTKSGKLRLDSWISSRITGISRARVQSSIRSGLVSVNGRVIEKVAYMVRD 1353 ++G ++EET+ S KLR+DSWISSRI GISRARVQSSIRSGLVSVNG VI KV+++VRD Sbjct: 59 FSGHKIEETVALDSAKLRVDSWISSRINGISRARVQSSIRSGLVSVNGHVISKVSHVVRD 118 Query: 1352 GDKVNCTISELQPLRAEPEDIPLNIVFEDEHVLVVNKPAHMVVHPAPGNATGTLVNGILH 1173 GD VNCTI+ELQPLRAEPE+IPL+IV+ED+H+LVVNKPAHMVVHPAPGNA GTLVNGILH Sbjct: 119 GDSVNCTIAELQPLRAEPENIPLDIVYEDDHLLVVNKPAHMVVHPAPGNANGTLVNGILH 178 Query: 1172 HCSLPMVAFPNQEVLXXXXXXXXXXXXXXXXEQGRNEGTGFGICEASIRPGIVHRLDKGT 993 HC L V F N E L +E T F E+S+RPGIVHRLDKGT Sbjct: 179 HCRLSTVCF-NPESLPDNIDDDDSI----------DEATVFP-SESSVRPGIVHRLDKGT 226 Query: 992 SGLLVVAKDEHSHSHLSEQFKKHTIQRVYISLTCGLPSPLSGRIDIPIGRDLSNRIRMVA 813 SGLLVVAKDEHSHSHL+EQFKKHT++RVY+SLTCG+PSP+SGR+DIPIGRD +NRIRMVA Sbjct: 227 SGLLVVAKDEHSHSHLAEQFKKHTVKRVYVSLTCGVPSPVSGRVDIPIGRDSNNRIRMVA 286 Query: 812 IPGSNTRGQARHAASRYRVIEILAGGGSALVEWRLETGRTHQIRAHAKYLGIPLLGDEVY 633 IPGS G+ARHA SRY+V+EILAGGG ALVEWRLETGRTHQIRAHAKYLGIPLLGD+VY Sbjct: 287 IPGSALHGKARHAVSRYKVVEILAGGGCALVEWRLETGRTHQIRAHAKYLGIPLLGDDVY 346 Query: 632 GGTKCMAMSLLRTRTPTNFHGQLMQLVSRLERPCLHALALGFRHPYTGENMHFSCLPPVD 453 GGTK MA+S L+++ ++++GQ+ QLV++LERP LHAL+LGFRHP+ GE++HFS +PP D Sbjct: 347 GGTKHMALSQLQSKNSSSYYGQIHQLVAKLERPSLHALSLGFRHPHKGEDLHFSQMPPFD 406 Query: 452 FAEILSGLREISTEKV 405 FAEIL LR IS+EKV Sbjct: 407 FAEILDCLRNISSEKV 422 >gb|EYU17562.1| hypothetical protein MIMGU_mgv1a006781mg [Erythranthe guttata] Length = 432 Score = 548 bits (1413), Expect = e-153 Identities = 288/436 (66%), Positives = 347/436 (79%), Gaps = 5/436 (1%) Frame = -3 Query: 1697 VISIKALNYSSSLCFFLRNPRSFSRFPRIIRACSGL-----AGESASCKSQELPSVRRTN 1533 ++S+++LN+SS F + NPR+ F R++ S A S S SQ+ S R N Sbjct: 1 MLSLQSLNWSSIKPFPI-NPRN-PAFWRLLSTSSAYPDSIPADYSDSDDSQDSISGRPNN 58 Query: 1532 YAGVRLEETIDTKSGKLRLDSWISSRITGISRARVQSSIRSGLVSVNGRVIEKVAYMVRD 1353 ++G ++EET+ S KLR+DSWISSRI GISRARVQSSIRSGLVSVNG VI KV+++VRD Sbjct: 59 FSGHKIEETVALDSAKLRVDSWISSRINGISRARVQSSIRSGLVSVNGHVISKVSHVVRD 118 Query: 1352 GDKVNCTISELQPLRAEPEDIPLNIVFEDEHVLVVNKPAHMVVHPAPGNATGTLVNGILH 1173 GD VNCTI+ELQPLRAEPE+IPL+IV+ED+H+LVVNKPAHMVVHPAPGNA GTLVNGILH Sbjct: 119 GDSVNCTIAELQPLRAEPENIPLDIVYEDDHLLVVNKPAHMVVHPAPGNANGTLVNGILH 178 Query: 1172 HCSLPMVAFPNQEVLXXXXXXXXXXXXXXXXEQGRNEGTGFGICEASIRPGIVHRLDKGT 993 HC L V F N E L +E T F E+S+RPGIVHRLDKGT Sbjct: 179 HCRLSTVCF-NPESLPDNIDDDDSI----------DEATVFP-SESSVRPGIVHRLDKGT 226 Query: 992 SGLLVVAKDEHSHSHLSEQFKKHTIQRVYISLTCGLPSPLSGRIDIPIGRDLSNRIRMVA 813 SGLLVVAKDEHSHSHL+EQFKKHT++RVY+SLTCG+PSP+SGR+DIPIGRD +NRIRMVA Sbjct: 227 SGLLVVAKDEHSHSHLAEQFKKHTVKRVYVSLTCGVPSPVSGRVDIPIGRDSNNRIRMVA 286 Query: 812 IPGSNTRGQARHAASRYRVIEILAGGGSALVEWRLETGRTHQIRAHAKYLGIPLLGDEVY 633 IPGS G+ARHA SRY+V+EILAGGG ALVEWRLETGRTHQIRAHAKYLGIPLLGD+VY Sbjct: 287 IPGSALHGKARHAVSRYKVVEILAGGGCALVEWRLETGRTHQIRAHAKYLGIPLLGDDVY 346 Query: 632 GGTKCMAMSLLRTRTPTNFHGQLMQLVSRLERPCLHALALGFRHPYTGENMHFSCLPPVD 453 GGTK MA+S L+++ ++++GQ+ QLV++LERP LHAL+LGFRHP+ GE++HFS +PP D Sbjct: 347 GGTKHMALSQLQSKNSSSYYGQIHQLVAKLERPSLHALSLGFRHPHKGEDLHFSQMPPFD 406 Query: 452 FAEILSGLREISTEKV 405 FAEIL LR IS+EK+ Sbjct: 407 FAEILDCLRNISSEKM 422