BLASTX nr result
ID: Cornus23_contig00019469
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cornus23_contig00019469
(519 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011099383.1| PREDICTED: pentatricopeptide repeat-containi... 62 2e-07
ref|XP_009779649.1| PREDICTED: pentatricopeptide repeat-containi... 61 3e-07
ref|XP_009622794.1| PREDICTED: pentatricopeptide repeat-containi... 61 3e-07
ref|XP_010316025.1| PREDICTED: pentatricopeptide repeat-containi... 60 5e-07
ref|XP_009362585.1| PREDICTED: pentatricopeptide repeat-containi... 58 2e-06
ref|XP_008344352.1| PREDICTED: pentatricopeptide repeat-containi... 58 3e-06
ref|XP_008341222.1| PREDICTED: pentatricopeptide repeat-containi... 58 3e-06
ref|XP_008341213.1| PREDICTED: pentatricopeptide repeat-containi... 58 3e-06
ref|XP_008237850.1| PREDICTED: pentatricopeptide repeat-containi... 57 4e-06
ref|XP_006363825.1| PREDICTED: pentatricopeptide repeat-containi... 57 4e-06
ref|XP_007204940.1| hypothetical protein PRUPE_ppa001240mg [Prun... 57 4e-06
ref|XP_012854009.1| PREDICTED: pentatricopeptide repeat-containi... 56 9e-06
>ref|XP_011099383.1| PREDICTED: pentatricopeptide repeat-containing protein At5g67570,
chloroplastic [Sesamum indicum]
Length = 868
Score = 62.0 bits (149), Expect = 2e-07
Identities = 39/84 (46%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Frame = -2
Query: 251 FANLLE-ETGVEAGKWTNTKAREDKPASKQLAKAVGMTICNKLRLSGTNLSVRDCKFSKM 75
FA LL+ + +E G W R P + +A+ I RLS T LSV+D KF++
Sbjct: 144 FAWLLDNDIELEEG-WFENDGRRWAPPKRSETEAIRFLID---RLSATELSVKDWKFTRT 199
Query: 74 MKQCGLQFTEAQLLKIVRGLGDKG 3
MK GLQFTE Q++KIV GLGDKG
Sbjct: 200 MKYSGLQFTERQMMKIVEGLGDKG 223
>ref|XP_009779649.1| PREDICTED: pentatricopeptide repeat-containing protein At5g67570,
chloroplastic [Nicotiana sylvestris]
Length = 876
Score = 61.2 bits (147), Expect = 3e-07
Identities = 28/41 (68%), Positives = 34/41 (82%)
Frame = -2
Query: 125 RLSGTNLSVRDCKFSKMMKQCGLQFTEAQLLKIVRGLGDKG 3
RLSGT L V+D KFSK+MK GLQFTE Q+L++V GLG+KG
Sbjct: 188 RLSGTELGVKDYKFSKLMKHSGLQFTEEQMLRLVEGLGEKG 228
>ref|XP_009622794.1| PREDICTED: pentatricopeptide repeat-containing protein At5g67570,
chloroplastic [Nicotiana tomentosiformis]
Length = 875
Score = 61.2 bits (147), Expect = 3e-07
Identities = 28/41 (68%), Positives = 34/41 (82%)
Frame = -2
Query: 125 RLSGTNLSVRDCKFSKMMKQCGLQFTEAQLLKIVRGLGDKG 3
RLSGT L V+D KFSK+MK GLQFTE Q+L++V GLG+KG
Sbjct: 188 RLSGTELGVKDYKFSKLMKHSGLQFTEEQMLRLVEGLGEKG 228
>ref|XP_010316025.1| PREDICTED: pentatricopeptide repeat-containing protein At5g67570,
chloroplastic [Solanum lycopersicum]
Length = 871
Score = 60.5 bits (145), Expect = 5e-07
Identities = 27/41 (65%), Positives = 35/41 (85%)
Frame = -2
Query: 125 RLSGTNLSVRDCKFSKMMKQCGLQFTEAQLLKIVRGLGDKG 3
RLSGT L V+D KFSK+MK GLQ+TE Q+L++V+GLG+KG
Sbjct: 188 RLSGTGLGVKDYKFSKLMKHSGLQYTEEQMLRLVQGLGEKG 228
>ref|XP_009362585.1| PREDICTED: pentatricopeptide repeat-containing protein At5g67570,
chloroplastic [Pyrus x bretschneideri]
Length = 869
Score = 58.2 bits (139), Expect = 2e-06
Identities = 29/41 (70%), Positives = 31/41 (75%)
Frame = -2
Query: 125 RLSGTNLSVRDCKFSKMMKQCGLQFTEAQLLKIVRGLGDKG 3
RLS T S RD K SKMMKQ GLQFTE Q+LKI+ GLG KG
Sbjct: 194 RLSSTEFSARDWKLSKMMKQSGLQFTEGQMLKILGGLGAKG 234
>ref|XP_008344352.1| PREDICTED: pentatricopeptide repeat-containing protein At5g67570,
chloroplastic-like [Malus domestica]
Length = 575
Score = 57.8 bits (138), Expect = 3e-06
Identities = 37/71 (52%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Frame = -2
Query: 212 KWTNTKAREDKPASKQLAKAVGMTICNKL-RLSGTNLSVRDCKFSKMMKQCGLQFTEAQL 36
+W N + R P SK+ + G I + RLS T S RD K SKMMKQ GLQFTE Q
Sbjct: 165 EWFNGEDRVWDP-SKRRRRGEGEVIQFLVDRLSSTEFSARDWKLSKMMKQSGLQFTEGQT 223
Query: 35 LKIVRGLGDKG 3
LKI+ GLG KG
Sbjct: 224 LKILGGLGAKG 234
>ref|XP_008341222.1| PREDICTED: pentatricopeptide repeat-containing protein At5g67570,
chloroplastic isoform X2 [Malus domestica]
Length = 865
Score = 57.8 bits (138), Expect = 3e-06
Identities = 37/71 (52%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Frame = -2
Query: 212 KWTNTKAREDKPASKQLAKAVGMTICNKL-RLSGTNLSVRDCKFSKMMKQCGLQFTEAQL 36
+W N + R P SK+ + G I + RLS T S RD K SKMMKQ GLQFTE Q
Sbjct: 165 EWFNGEDRVWDP-SKRRRRGEGEVIQFLVDRLSSTEFSARDWKLSKMMKQSGLQFTEGQT 223
Query: 35 LKIVRGLGDKG 3
LKI+ GLG KG
Sbjct: 224 LKILGGLGAKG 234
>ref|XP_008341213.1| PREDICTED: pentatricopeptide repeat-containing protein At5g67570,
chloroplastic isoform X1 [Malus domestica]
Length = 889
Score = 57.8 bits (138), Expect = 3e-06
Identities = 37/71 (52%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Frame = -2
Query: 212 KWTNTKAREDKPASKQLAKAVGMTICNKL-RLSGTNLSVRDCKFSKMMKQCGLQFTEAQL 36
+W N + R P SK+ + G I + RLS T S RD K SKMMKQ GLQFTE Q
Sbjct: 165 EWFNGEDRVWDP-SKRRRRGEGEVIQFLVDRLSSTEFSARDWKLSKMMKQSGLQFTEGQT 223
Query: 35 LKIVRGLGDKG 3
LKI+ GLG KG
Sbjct: 224 LKILGGLGAKG 234
>ref|XP_008237850.1| PREDICTED: pentatricopeptide repeat-containing protein At5g67570,
chloroplastic [Prunus mume]
Length = 874
Score = 57.4 bits (137), Expect = 4e-06
Identities = 28/41 (68%), Positives = 32/41 (78%)
Frame = -2
Query: 125 RLSGTNLSVRDCKFSKMMKQCGLQFTEAQLLKIVRGLGDKG 3
RLS T S++D K SKMMKQ GLQFTE Q+LKI+ GLG KG
Sbjct: 195 RLSATEFSMKDWKLSKMMKQSGLQFTEGQMLKILGGLGAKG 235
>ref|XP_006363825.1| PREDICTED: pentatricopeptide repeat-containing protein At5g67570,
chloroplastic-like [Solanum tuberosum]
Length = 864
Score = 57.4 bits (137), Expect = 4e-06
Identities = 26/41 (63%), Positives = 34/41 (82%)
Frame = -2
Query: 125 RLSGTNLSVRDCKFSKMMKQCGLQFTEAQLLKIVRGLGDKG 3
RLS T L V+D KFSK+MK GLQ+TE Q+L++V+GLG+KG
Sbjct: 188 RLSETELGVKDYKFSKLMKHSGLQYTEEQMLRLVQGLGEKG 228
>ref|XP_007204940.1| hypothetical protein PRUPE_ppa001240mg [Prunus persica]
gi|462400582|gb|EMJ06139.1| hypothetical protein
PRUPE_ppa001240mg [Prunus persica]
Length = 874
Score = 57.4 bits (137), Expect = 4e-06
Identities = 28/41 (68%), Positives = 32/41 (78%)
Frame = -2
Query: 125 RLSGTNLSVRDCKFSKMMKQCGLQFTEAQLLKIVRGLGDKG 3
RLS T S++D K SKMMKQ GLQFTE Q+LKI+ GLG KG
Sbjct: 195 RLSATEFSMKDWKLSKMMKQSGLQFTEGQMLKILGGLGAKG 235
>ref|XP_012854009.1| PREDICTED: pentatricopeptide repeat-containing protein At5g67570,
chloroplastic [Erythranthe guttatus]
Length = 785
Score = 56.2 bits (134), Expect = 9e-06
Identities = 32/78 (41%), Positives = 49/78 (62%)
Frame = -2
Query: 236 EETGVEAGKWTNTKAREDKPASKQLAKAVGMTICNKLRLSGTNLSVRDCKFSKMMKQCGL 57
++ +E G + N + R+ P + A+++ + RLS T LS +D KF++MM+ GL
Sbjct: 151 KDIDLEDGLFEN-EGRKWAPRQRTEAESIKFLVD---RLSATELSAKDWKFTRMMRYSGL 206
Query: 56 QFTEAQLLKIVRGLGDKG 3
QFTE Q++KIV GLG KG
Sbjct: 207 QFTEGQMMKIVNGLGYKG 224