BLASTX nr result

ID: Cornus23_contig00019417 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00019417
         (447 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CDP05240.1| unnamed protein product [Coffea canephora]             60   8e-07
ref|XP_010317582.1| PREDICTED: E3 ubiquitin ligase BIG BROTHER-l...    59   1e-06
ref|XP_010317579.1| PREDICTED: E3 ubiquitin ligase BIG BROTHER-l...    59   1e-06
ref|XP_009767003.1| PREDICTED: E3 ubiquitin ligase BIG BROTHER-l...    59   1e-06
ref|XP_009612485.1| PREDICTED: E3 ubiquitin ligase BIG BROTHER-l...    59   1e-06
ref|XP_006353353.1| PREDICTED: E3 ubiquitin ligase BIG BROTHER-l...    59   1e-06

>emb|CDP05240.1| unnamed protein product [Coffea canephora]
          Length = 238

 Score = 59.7 bits (143), Expect = 8e-07
 Identities = 32/73 (43%), Positives = 46/73 (63%)
 Frame = -1

Query: 291 LTERVTMLNEEVHDQDLDAQFSPEIVKNFKELFPEHGDLTHEEFLQQQASVYQSLQGNER 112
           ++E   + N EV    L+ +   EI +NFKE FPE GDL+ EE L QQ S +Q +Q N +
Sbjct: 1   MSETFVIDNNEV-SVHLNDRIPAEIAENFKEFFPEDGDLSLEEVLLQQESAFQYIQANGK 59

Query: 111 NKGSISDHGQSSD 73
           NK   S++GQ+S+
Sbjct: 60  NKDKTSNNGQTSN 72


>ref|XP_010317582.1| PREDICTED: E3 ubiquitin ligase BIG BROTHER-like isoform X2 [Solanum
           lycopersicum]
          Length = 190

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 29/66 (43%), Positives = 39/66 (59%)
 Frame = -1

Query: 273 MLNEEVHDQDLDAQFSPEIVKNFKELFPEHGDLTHEEFLQQQASVYQSLQGNERNKGSIS 94
           M N  +H          EI +N K+ FPE GDL++EE L QQ +VY S Q N +NK   S
Sbjct: 1   MSNSLLHSHYSSGGIPSEIAENLKDFFPEDGDLSYEEVLLQQETVYLSFQANGKNKSMSS 60

Query: 93  DHGQSS 76
           ++GQ+S
Sbjct: 61  EYGQTS 66


>ref|XP_010317579.1| PREDICTED: E3 ubiquitin ligase BIG BROTHER-like isoform X1 [Solanum
           lycopersicum] gi|723679468|ref|XP_010317580.1|
           PREDICTED: E3 ubiquitin ligase BIG BROTHER-like isoform
           X1 [Solanum lycopersicum]
           gi|723679471|ref|XP_010317581.1| PREDICTED: E3 ubiquitin
           ligase BIG BROTHER-like isoform X1 [Solanum
           lycopersicum]
          Length = 237

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 29/66 (43%), Positives = 39/66 (59%)
 Frame = -1

Query: 273 MLNEEVHDQDLDAQFSPEIVKNFKELFPEHGDLTHEEFLQQQASVYQSLQGNERNKGSIS 94
           M N  +H          EI +N K+ FPE GDL++EE L QQ +VY S Q N +NK   S
Sbjct: 1   MSNSLLHSHYSSGGIPSEIAENLKDFFPEDGDLSYEEVLLQQETVYLSFQANGKNKSMSS 60

Query: 93  DHGQSS 76
           ++GQ+S
Sbjct: 61  EYGQTS 66


>ref|XP_009767003.1| PREDICTED: E3 ubiquitin ligase BIG BROTHER-like [Nicotiana
           sylvestris] gi|698544270|ref|XP_009767004.1| PREDICTED:
           E3 ubiquitin ligase BIG BROTHER-like [Nicotiana
           sylvestris] gi|698544273|ref|XP_009767005.1| PREDICTED:
           E3 ubiquitin ligase BIG BROTHER-like [Nicotiana
           sylvestris]
          Length = 238

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 29/66 (43%), Positives = 40/66 (60%)
 Frame = -1

Query: 273 MLNEEVHDQDLDAQFSPEIVKNFKELFPEHGDLTHEEFLQQQASVYQSLQGNERNKGSIS 94
           M N  +H          EI +N K+LFPE GDL++EE L QQ +VY S Q N +N+   S
Sbjct: 1   MSNSLLHTHYSSGGIPSEIAENIKDLFPEDGDLSYEEVLLQQETVYLSFQANGKNRNMSS 60

Query: 93  DHGQSS 76
           ++GQ+S
Sbjct: 61  EYGQTS 66


>ref|XP_009612485.1| PREDICTED: E3 ubiquitin ligase BIG BROTHER-like [Nicotiana
           tomentosiformis] gi|697117113|ref|XP_009612486.1|
           PREDICTED: E3 ubiquitin ligase BIG BROTHER-like
           [Nicotiana tomentosiformis]
           gi|697117115|ref|XP_009612487.1| PREDICTED: E3 ubiquitin
           ligase BIG BROTHER-like [Nicotiana tomentosiformis]
          Length = 238

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 29/66 (43%), Positives = 40/66 (60%)
 Frame = -1

Query: 273 MLNEEVHDQDLDAQFSPEIVKNFKELFPEHGDLTHEEFLQQQASVYQSLQGNERNKGSIS 94
           M N  +H          EI +N K+LFPE GDL++EE L QQ +VY S Q N +N+   S
Sbjct: 1   MSNSLLHTHYSSGGIPSEIAENIKDLFPEDGDLSYEEVLLQQETVYLSFQANGKNRNMSS 60

Query: 93  DHGQSS 76
           ++GQ+S
Sbjct: 61  EYGQTS 66


>ref|XP_006353353.1| PREDICTED: E3 ubiquitin ligase BIG BROTHER-like isoform X1 [Solanum
           tuberosum] gi|565373592|ref|XP_006353354.1| PREDICTED:
           E3 ubiquitin ligase BIG BROTHER-like isoform X2 [Solanum
           tuberosum] gi|565373594|ref|XP_006353355.1| PREDICTED:
           E3 ubiquitin ligase BIG BROTHER-like isoform X3 [Solanum
           tuberosum]
          Length = 239

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 29/67 (43%), Positives = 40/67 (59%)
 Frame = -1

Query: 273 MLNEEVHDQDLDAQFSPEIVKNFKELFPEHGDLTHEEFLQQQASVYQSLQGNERNKGSIS 94
           M N  +H       F  EI +N K+ FPE  DL++EE L QQ +VY S Q N +NK   S
Sbjct: 1   MSNGLLHSHYSSGGFPSEIAENLKDFFPEDSDLSYEEVLLQQETVYLSFQANGKNKNMSS 60

Query: 93  DHGQSSD 73
           ++GQ+S+
Sbjct: 61  EYGQTSN 67


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