BLASTX nr result

ID: Cornus23_contig00019362 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00019362
         (325 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KDO52562.1| hypothetical protein CISIN_1g015470mg [Citrus sin...    58   3e-06
ref|XP_006490199.1| PREDICTED: F-box protein At5g07610-like [Cit...    58   3e-06
ref|XP_009800259.1| PREDICTED: F-box protein At5g49610-like [Nic...    57   7e-06
gb|KDO37504.1| hypothetical protein CISIN_1g045078mg, partial [C...    56   9e-06
ref|NP_175213.1| putative F-box protein [Arabidopsis thaliana] g...    56   9e-06

>gb|KDO52562.1| hypothetical protein CISIN_1g015470mg [Citrus sinensis]
          Length = 406

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 27/44 (61%), Positives = 32/44 (72%)
 Frame = +1

Query: 178 DDLVTEILLRLPLNSVFKFKCVSKTWNHLISDPIFCSNYQSQRK 309
           DDL+TEILLRLP+ S+ KFK VSK W  LIS+P+FC      RK
Sbjct: 34  DDLLTEILLRLPIKSLLKFKSVSKHWLSLISNPVFCHRLSLTRK 77


>ref|XP_006490199.1| PREDICTED: F-box protein At5g07610-like [Citrus sinensis]
          Length = 369

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 27/44 (61%), Positives = 32/44 (72%)
 Frame = +1

Query: 178 DDLVTEILLRLPLNSVFKFKCVSKTWNHLISDPIFCSNYQSQRK 309
           DDL+TEILLRLP+ S+ KFK VSK W  LIS+P+FC      RK
Sbjct: 34  DDLLTEILLRLPIKSLLKFKSVSKHWLSLISNPVFCHRLSLTRK 77


>ref|XP_009800259.1| PREDICTED: F-box protein At5g49610-like [Nicotiana sylvestris]
          Length = 404

 Score = 56.6 bits (135), Expect = 7e-06
 Identities = 24/46 (52%), Positives = 34/46 (73%)
 Frame = +1

Query: 178 DDLVTEILLRLPLNSVFKFKCVSKTWNHLISDPIFCSNYQSQRKNS 315
           DD++ EIL+RLP+ S+ +FKCVSK+W  LISDP F   + +  KN+
Sbjct: 60  DDIIMEILIRLPVKSLLQFKCVSKSWQALISDPYFKMKHLNHAKNN 105


>gb|KDO37504.1| hypothetical protein CISIN_1g045078mg, partial [Citrus sinensis]
          Length = 129

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 26/44 (59%), Positives = 32/44 (72%)
 Frame = +1

Query: 178 DDLVTEILLRLPLNSVFKFKCVSKTWNHLISDPIFCSNYQSQRK 309
           DDL+TEIL+RLP+ S+ KFK VSK W  LIS+P+FC      RK
Sbjct: 34  DDLLTEILIRLPIKSLLKFKSVSKHWLSLISNPVFCRRLSLIRK 77


>ref|NP_175213.1| putative F-box protein [Arabidopsis thaliana]
           gi|75263267|sp|Q9FZF8.1|FB44_ARATH RecName:
           Full=Putative F-box protein At1g47790
           gi|9802587|gb|AAF99789.1|AC012463_6 T2E6.11 [Arabidopsis
           thaliana] gi|332194093|gb|AEE32214.1| putative F-box
           protein [Arabidopsis thaliana]
          Length = 389

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 27/49 (55%), Positives = 35/49 (71%), Gaps = 2/49 (4%)
 Frame = +1

Query: 181 DLVTEILLRLPLNSVFKFKCVSKTWNHLISDPIFCSNY--QSQRKNSLL 321
           DL +EILLRLP+ SV +F+CVSK W+ +I+DP F   Y  QS  + SLL
Sbjct: 28  DLASEILLRLPVKSVVRFRCVSKLWSSIITDPYFIKTYETQSSTRQSLL 76


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