BLASTX nr result
ID: Cornus23_contig00019154
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cornus23_contig00019154
(1591 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002303467.2| DNA-directed RNA polymerase II 8.2 kDa polyp... 110 5e-21
ref|XP_006381558.1| hypothetical protein POPTR_0006s13850g [Popu... 110 5e-21
ref|XP_007225838.1| hypothetical protein PRUPE_ppa014395mg [Prun... 107 2e-20
ref|XP_012085063.1| PREDICTED: DNA-directed RNA polymerase subun... 107 3e-20
gb|KHG15012.1| hypothetical protein F383_19444 [Gossypium arboreum] 107 3e-20
ref|XP_002263065.1| PREDICTED: DNA-directed RNA polymerases I, I... 107 3e-20
ref|XP_007044696.1| RNA polymerases N / 8 kDa subunit [Theobroma... 107 3e-20
ref|XP_010533946.1| PREDICTED: DNA-directed RNA polymerase subun... 106 5e-20
ref|XP_010248514.1| PREDICTED: DNA-directed RNA polymerases I, I... 106 5e-20
ref|XP_008373233.1| PREDICTED: DNA-directed RNA polymerase subun... 106 5e-20
ref|XP_004297393.1| PREDICTED: DNA-directed RNA polymerases I, I... 106 5e-20
ref|XP_009405913.1| PREDICTED: DNA-directed RNA polymerase subun... 106 7e-20
ref|XP_006828771.1| PREDICTED: DNA-directed RNA polymerases I, I... 106 7e-20
gb|ABK20909.1| unknown [Picea sitchensis] gi|116781551|gb|ABK221... 106 7e-20
gb|ABF70104.1| DNA-directed RNA polymerase II 8.2 kDa polypeptid... 106 7e-20
ref|XP_009611116.1| PREDICTED: DNA-directed RNA polymerases I, I... 105 1e-19
ref|XP_009105127.1| PREDICTED: DNA-directed RNA polymerase subun... 105 1e-19
ref|XP_003578831.1| PREDICTED: DNA-directed RNA polymerases I, I... 105 1e-19
ref|XP_010696273.1| PREDICTED: DNA-directed RNA polymerases I, I... 105 1e-19
ref|XP_010547747.1| PREDICTED: DNA-directed RNA polymerases I, I... 105 1e-19
>ref|XP_002303467.2| DNA-directed RNA polymerase II 8.2 kDa polypeptide family protein
[Populus trichocarpa] gi|550342885|gb|EEE78446.2|
DNA-directed RNA polymerase II 8.2 kDa polypeptide family
protein [Populus trichocarpa]
Length = 74
Score = 110 bits (274), Expect = 5e-21
Identities = 52/54 (96%), Positives = 54/54 (100%)
Frame = -1
Query: 1432 FDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLLNYNTLEKSEGT 1271
+DTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLLNYNTLEKSEG+
Sbjct: 21 WDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLLNYNTLEKSEGS 74
>ref|XP_006381558.1| hypothetical protein POPTR_0006s13850g [Populus trichocarpa]
gi|743847658|ref|XP_011028034.1| PREDICTED: DNA-directed
RNA polymerases I, II, and III subunit RPABC5 [Populus
euphratica] gi|743893319|ref|XP_011039912.1| PREDICTED:
DNA-directed RNA polymerases I, II, and III subunit
RPABC5 [Populus euphratica] gi|118486243|gb|ABK94963.1|
unknown [Populus trichocarpa] gi|550336264|gb|ERP59355.1|
hypothetical protein POPTR_0006s13850g [Populus
trichocarpa] gi|661880292|emb|CDP16088.1| unnamed protein
product [Coffea canephora]
Length = 71
Score = 110 bits (274), Expect = 5e-21
Identities = 52/54 (96%), Positives = 54/54 (100%)
Frame = -1
Query: 1432 FDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLLNYNTLEKSEGT 1271
+DTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLLNYNTLEKSEG+
Sbjct: 18 WDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLLNYNTLEKSEGS 71
>ref|XP_007225838.1| hypothetical protein PRUPE_ppa014395mg [Prunus persica]
gi|645230244|ref|XP_008221846.1| PREDICTED: DNA-directed
RNA polymerases I, II, and III subunit RPABC5 [Prunus
mume] gi|462422774|gb|EMJ27037.1| hypothetical protein
PRUPE_ppa014395mg [Prunus persica]
Length = 71
Score = 107 bits (268), Expect = 2e-20
Identities = 51/54 (94%), Positives = 53/54 (98%)
Frame = -1
Query: 1432 FDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLLNYNTLEKSEGT 1271
+DTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLLNYNTLEKSE +
Sbjct: 18 WDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLLNYNTLEKSENS 71
>ref|XP_012085063.1| PREDICTED: DNA-directed RNA polymerase subunit 10-like protein
[Jatropha curcas]
Length = 71
Score = 107 bits (267), Expect = 3e-20
Identities = 50/54 (92%), Positives = 54/54 (100%)
Frame = -1
Query: 1432 FDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLLNYNTLEKSEGT 1271
+DTYLDLLQADY+EGDALDALGLVRYCCRRMLMTHVDLIEKLLNYNTLE+SEG+
Sbjct: 18 WDTYLDLLQADYSEGDALDALGLVRYCCRRMLMTHVDLIEKLLNYNTLERSEGS 71
>gb|KHG15012.1| hypothetical protein F383_19444 [Gossypium arboreum]
Length = 71
Score = 107 bits (267), Expect = 3e-20
Identities = 51/52 (98%), Positives = 52/52 (100%)
Frame = -1
Query: 1432 FDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLLNYNTLEKSE 1277
+DTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLLNYNTLEKSE
Sbjct: 18 WDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLLNYNTLEKSE 69
>ref|XP_002263065.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit RPABC5
[Vitis vinifera] gi|590591838|ref|XP_007017127.1| RNA
polymerases N / 8 kDa subunit [Theobroma cacao]
gi|823159079|ref|XP_012479370.1| PREDICTED: DNA-directed
RNA polymerases I, II, and III subunit RPABC5 [Gossypium
raimondii] gi|823210482|ref|XP_012438264.1| PREDICTED:
DNA-directed RNA polymerases I, II, and III subunit
RPABC5 [Gossypium raimondii] gi|297739069|emb|CBI28558.3|
unnamed protein product [Vitis vinifera]
gi|508787490|gb|EOY34746.1| RNA polymerases N / 8 kDa
subunit [Theobroma cacao] gi|763763956|gb|KJB31210.1|
hypothetical protein B456_005G181100 [Gossypium
raimondii] gi|763783160|gb|KJB50231.1| hypothetical
protein B456_008G159800 [Gossypium raimondii]
gi|763783161|gb|KJB50232.1| hypothetical protein
B456_008G159800 [Gossypium raimondii]
Length = 71
Score = 107 bits (267), Expect = 3e-20
Identities = 51/52 (98%), Positives = 52/52 (100%)
Frame = -1
Query: 1432 FDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLLNYNTLEKSE 1277
+DTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLLNYNTLEKSE
Sbjct: 18 WDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLLNYNTLEKSE 69
>ref|XP_007044696.1| RNA polymerases N / 8 kDa subunit [Theobroma cacao]
gi|508708631|gb|EOY00528.1| RNA polymerases N / 8 kDa
subunit [Theobroma cacao]
Length = 113
Score = 107 bits (267), Expect = 3e-20
Identities = 51/52 (98%), Positives = 52/52 (100%)
Frame = -1
Query: 1432 FDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLLNYNTLEKSE 1277
+DTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLLNYNTLEKSE
Sbjct: 60 WDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLLNYNTLEKSE 111
>ref|XP_010533946.1| PREDICTED: DNA-directed RNA polymerase subunit 10-like protein
[Tarenaya hassleriana]
Length = 71
Score = 106 bits (265), Expect = 5e-20
Identities = 50/54 (92%), Positives = 53/54 (98%)
Frame = -1
Query: 1432 FDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLLNYNTLEKSEGT 1271
+DTYLDLLQADY+EGDALDALGLVRYCCRRMLMTHVDLIEKLLNYNTLEKS+ T
Sbjct: 18 WDTYLDLLQADYSEGDALDALGLVRYCCRRMLMTHVDLIEKLLNYNTLEKSDNT 71
>ref|XP_010248514.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit RPABC5
[Nelumbo nucifera] gi|720082477|ref|XP_010242603.1|
PREDICTED: DNA-directed RNA polymerases I, II, and III
subunit RPABC5 [Nelumbo nucifera]
Length = 71
Score = 106 bits (265), Expect = 5e-20
Identities = 50/54 (92%), Positives = 53/54 (98%)
Frame = -1
Query: 1432 FDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLLNYNTLEKSEGT 1271
+DTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLLNYNTLEK+E +
Sbjct: 18 WDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLLNYNTLEKTESS 71
>ref|XP_008373233.1| PREDICTED: DNA-directed RNA polymerase subunit 10-like protein [Malus
domestica] gi|694380404|ref|XP_009366337.1| PREDICTED:
DNA-directed RNA polymerase subunit 10-like protein
[Pyrus x bretschneideri] gi|694384911|ref|XP_009368326.1|
PREDICTED: DNA-directed RNA polymerase subunit 10-like
protein [Pyrus x bretschneideri]
gi|694445647|ref|XP_009349247.1| PREDICTED: DNA-directed
RNA polymerase subunit 10-like protein [Pyrus x
bretschneideri]
Length = 71
Score = 106 bits (265), Expect = 5e-20
Identities = 50/54 (92%), Positives = 53/54 (98%)
Frame = -1
Query: 1432 FDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLLNYNTLEKSEGT 1271
+DTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLLNYNTLEKS+ +
Sbjct: 18 WDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLLNYNTLEKSDAS 71
>ref|XP_004297393.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit RPABC5
[Fragaria vesca subsp. vesca]
Length = 71
Score = 106 bits (265), Expect = 5e-20
Identities = 50/54 (92%), Positives = 53/54 (98%)
Frame = -1
Query: 1432 FDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLLNYNTLEKSEGT 1271
+DTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLLNYNTLEKS+ +
Sbjct: 18 WDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLLNYNTLEKSDNS 71
>ref|XP_009405913.1| PREDICTED: DNA-directed RNA polymerase subunit 10-like protein [Musa
acuminata subsp. malaccensis]
Length = 71
Score = 106 bits (264), Expect = 7e-20
Identities = 50/52 (96%), Positives = 52/52 (100%)
Frame = -1
Query: 1432 FDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLLNYNTLEKSE 1277
+DTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLLNYNTLEK+E
Sbjct: 18 WDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLLNYNTLEKTE 69
>ref|XP_006828771.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit RPABC5
[Amborella trichopoda] gi|586757438|ref|XP_006853572.1|
PREDICTED: DNA-directed RNA polymerases I, II, and III
subunit RPABC5 [Amborella trichopoda]
gi|548833750|gb|ERM96187.1| hypothetical protein
AMTR_s00001p00093860 [Amborella trichopoda]
gi|548857225|gb|ERN15039.1| hypothetical protein
AMTR_s00032p00243320 [Amborella trichopoda]
Length = 71
Score = 106 bits (264), Expect = 7e-20
Identities = 50/52 (96%), Positives = 52/52 (100%)
Frame = -1
Query: 1432 FDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLLNYNTLEKSE 1277
+DTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLLNYNTLEK+E
Sbjct: 18 WDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLLNYNTLEKNE 69
>gb|ABK20909.1| unknown [Picea sitchensis] gi|116781551|gb|ABK22149.1| unknown [Picea
sitchensis] gi|116789545|gb|ABK25286.1| unknown [Picea
sitchensis]
Length = 71
Score = 106 bits (264), Expect = 7e-20
Identities = 50/52 (96%), Positives = 52/52 (100%)
Frame = -1
Query: 1432 FDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLLNYNTLEKSE 1277
+DTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLLNYNTLE+SE
Sbjct: 18 WDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLLNYNTLERSE 69
>gb|ABF70104.1| DNA-directed RNA polymerase II 8.2 kDa polypeptide, putative [Musa
balbisiana]
Length = 70
Score = 106 bits (264), Expect = 7e-20
Identities = 50/52 (96%), Positives = 52/52 (100%)
Frame = -1
Query: 1432 FDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLLNYNTLEKSE 1277
+DTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLLNYNTLEK+E
Sbjct: 18 WDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLLNYNTLEKTE 69
>ref|XP_009611116.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit RPABC5
[Nicotiana tomentosiformis]
gi|698547619|ref|XP_009768090.1| PREDICTED: DNA-directed
RNA polymerases I, II, and III subunit RPABC5 [Nicotiana
sylvestris] gi|698564255|ref|XP_009772933.1| PREDICTED:
DNA-directed RNA polymerases I, II, and III subunit
RPABC5 [Nicotiana sylvestris]
Length = 71
Score = 105 bits (262), Expect = 1e-19
Identities = 50/54 (92%), Positives = 52/54 (96%)
Frame = -1
Query: 1432 FDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLLNYNTLEKSEGT 1271
+D YLDLLQADY+EGDALDAL LVRYCCRRMLMTHVDLIEKLLNYNTLEKSEGT
Sbjct: 18 WDEYLDLLQADYSEGDALDALNLVRYCCRRMLMTHVDLIEKLLNYNTLEKSEGT 71
>ref|XP_009105127.1| PREDICTED: DNA-directed RNA polymerase subunit 10-like protein
[Brassica rapa] gi|922414691|ref|XP_013591461.1|
PREDICTED: DNA-directed RNA polymerase subunit 10-like
protein [Brassica oleracea var. oleracea]
gi|923737537|ref|XP_013670204.1| PREDICTED: DNA-directed
RNA polymerase subunit 10-like protein [Brassica napus]
gi|923737636|ref|XP_013670232.1| PREDICTED: DNA-directed
RNA polymerase subunit 10-like protein [Brassica napus]
gi|674879856|emb|CDY52320.1| BnaA01g36190D [Brassica
napus]
Length = 71
Score = 105 bits (262), Expect = 1e-19
Identities = 49/52 (94%), Positives = 52/52 (100%)
Frame = -1
Query: 1432 FDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLLNYNTLEKSE 1277
+DTYLDLLQADYTEGDALDA+GLVRYCCRRMLMTHVDLIEKLLNYNTLEKS+
Sbjct: 18 WDTYLDLLQADYTEGDALDAIGLVRYCCRRMLMTHVDLIEKLLNYNTLEKSD 69
>ref|XP_003578831.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit RPABC5
[Brachypodium distachyon] gi|944056359|gb|KQJ91997.1|
hypothetical protein BRADI_4g41090 [Brachypodium
distachyon]
Length = 71
Score = 105 bits (262), Expect = 1e-19
Identities = 50/54 (92%), Positives = 52/54 (96%)
Frame = -1
Query: 1432 FDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLLNYNTLEKSEGT 1271
+D YLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLLNYNTLEK+E T
Sbjct: 18 WDHYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLLNYNTLEKTEAT 71
>ref|XP_010696273.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit RPABC5
[Beta vulgaris subsp. vulgaris]
gi|870844052|gb|KMS97111.1| hypothetical protein
BVRB_7g178930 [Beta vulgaris subsp. vulgaris]
gi|902213788|gb|KNA17337.1| hypothetical protein
SOVF_080850 [Spinacia oleracea]
gi|902233825|gb|KNA23210.1| hypothetical protein
SOVF_026860 [Spinacia oleracea]
Length = 71
Score = 105 bits (261), Expect = 1e-19
Identities = 49/52 (94%), Positives = 52/52 (100%)
Frame = -1
Query: 1432 FDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLLNYNTLEKSE 1277
+DTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLLNYNTL+KS+
Sbjct: 18 WDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLLNYNTLDKSD 69
>ref|XP_010547747.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit RPABC5
[Tarenaya hassleriana]
Length = 71
Score = 105 bits (261), Expect = 1e-19
Identities = 49/54 (90%), Positives = 53/54 (98%)
Frame = -1
Query: 1432 FDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLLNYNTLEKSEGT 1271
+DTYLDLLQADY+EGDALDALGLVRYCCRRMLMTHVDLIEKLLNYNTLEKS+ +
Sbjct: 18 WDTYLDLLQADYSEGDALDALGLVRYCCRRMLMTHVDLIEKLLNYNTLEKSDNS 71