BLASTX nr result
ID: Cornus23_contig00018756
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cornus23_contig00018756 (1035 letters) Database: ./nr 77,306,371 sequences; 28,104,191,420 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|KJB60706.1| hypothetical protein B456_009G321000 [Gossypium r... 79 6e-12 emb|CAD59438.1| Rps16 protein [Clivia gardenii] 68 3e-10 gb|KMS97977.1| hypothetical protein BVRB_4g096970 [Beta vulgaris... 70 4e-09 ref|YP_009175987.1| ribosomal protein S16 (chloroplast) [Ficus r... 63 4e-07 >gb|KJB60706.1| hypothetical protein B456_009G321000 [Gossypium raimondii] Length = 75 Score = 79.0 bits (193), Expect = 6e-12 Identities = 41/70 (58%), Positives = 45/70 (64%) Frame = -1 Query: 342 FYSSSIMYYLHYNPTKKRGSSGTEQTMSSQEHLHSYIK*WM*ESTTDRVLQVARCFLPHR 163 F SSS +YYLHYNP KK + T+ K W+ ST D VLQVARCFLPHR Sbjct: 6 FSSSSNLYYLHYNPKKKTDYNRTKDVEQKAPSFLYNGKWWVLTSTADHVLQVARCFLPHR 65 Query: 162 FKRSFTITFL 133 FKRSFTITFL Sbjct: 66 FKRSFTITFL 75 >emb|CAD59438.1| Rps16 protein [Clivia gardenii] Length = 74 Score = 68.2 bits (165), Expect(2) = 3e-10 Identities = 34/50 (68%), Positives = 44/50 (88%), Gaps = 2/50 (4%) Frame = +1 Query: 316 IVHDGARVESIDSFLGGRDLGLMSINKLEQLRKYIFDI--EIERIQFEQV 459 IVHDGAR +SIDSF+GG++LGL++INKL+QL KYI +I EIE ++FEQV Sbjct: 25 IVHDGARTKSIDSFIGGKNLGLVTINKLDQLCKYILNIEMEIEGLKFEQV 74 Score = 25.4 bits (54), Expect(2) = 3e-10 Identities = 12/19 (63%), Positives = 13/19 (68%) Frame = +2 Query: 251 SWLDIVCSVPLEPLFFVGL 307 S +DIVCSVP L VGL Sbjct: 1 SRIDIVCSVPARNLICVGL 19 >gb|KMS97977.1| hypothetical protein BVRB_4g096970 [Beta vulgaris subsp. vulgaris] Length = 50 Score = 69.7 bits (169), Expect = 4e-09 Identities = 32/40 (80%), Positives = 35/40 (87%) Frame = -3 Query: 211 HNGSCPSSRTLLSTTSFQTKFYHNISLSWNRYGNDSIMES 92 ++GSCP SRTLLSTTSFQTKFYHNI WN+YG DSIMES Sbjct: 11 NDGSCPLSRTLLSTTSFQTKFYHNIPQFWNQYGVDSIMES 50 >ref|YP_009175987.1| ribosomal protein S16 (chloroplast) [Ficus racemosa] gi|937500929|gb|ALI30688.1| ribosomal protein S16 (chloroplast) [Ficus racemosa] Length = 117 Score = 62.8 bits (151), Expect = 4e-07 Identities = 30/40 (75%), Positives = 34/40 (85%) Frame = +1 Query: 316 IVHDGARVESIDSFLGGRDLGLMSINKLEQLRKYIFDIEI 435 I+HDGAR E IDSF GG++LGL+SINKL QL K IFDIEI Sbjct: 4 IIHDGARAERIDSFFGGKNLGLVSINKLRQLCKSIFDIEI 43