BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00018756
         (1035 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KJB60706.1| hypothetical protein B456_009G321000 [Gossypium r...    79   6e-12
emb|CAD59438.1| Rps16 protein [Clivia gardenii]                        68   3e-10
gb|KMS97977.1| hypothetical protein BVRB_4g096970 [Beta vulgaris...    70   4e-09
ref|YP_009175987.1| ribosomal protein S16 (chloroplast) [Ficus r...    63   4e-07

>gb|KJB60706.1| hypothetical protein B456_009G321000 [Gossypium raimondii]
          Length = 75

 Score = 79.0 bits (193), Expect = 6e-12
 Identities = 41/70 (58%), Positives = 45/70 (64%)
 Frame = -1

Query: 342 FYSSSIMYYLHYNPTKKRGSSGTEQTMSSQEHLHSYIK*WM*ESTTDRVLQVARCFLPHR 163
           F SSS +YYLHYNP KK   + T+             K W+  ST D VLQVARCFLPHR
Sbjct: 6   FSSSSNLYYLHYNPKKKTDYNRTKDVEQKAPSFLYNGKWWVLTSTADHVLQVARCFLPHR 65

Query: 162 FKRSFTITFL 133
           FKRSFTITFL
Sbjct: 66  FKRSFTITFL 75


>emb|CAD59438.1| Rps16 protein [Clivia gardenii]
          Length = 74

 Score = 68.2 bits (165), Expect(2) = 3e-10
 Identities = 34/50 (68%), Positives = 44/50 (88%), Gaps = 2/50 (4%)
 Frame = +1

Query: 316 IVHDGARVESIDSFLGGRDLGLMSINKLEQLRKYIFDI--EIERIQFEQV 459
           IVHDGAR +SIDSF+GG++LGL++INKL+QL KYI +I  EIE ++FEQV
Sbjct: 25  IVHDGARTKSIDSFIGGKNLGLVTINKLDQLCKYILNIEMEIEGLKFEQV 74



 Score = 25.4 bits (54), Expect(2) = 3e-10
 Identities = 12/19 (63%), Positives = 13/19 (68%)
 Frame = +2

Query: 251 SWLDIVCSVPLEPLFFVGL 307
           S +DIVCSVP   L  VGL
Sbjct: 1   SRIDIVCSVPARNLICVGL 19


>gb|KMS97977.1| hypothetical protein BVRB_4g096970 [Beta vulgaris subsp. vulgaris]
          Length = 50

 Score = 69.7 bits (169), Expect = 4e-09
 Identities = 32/40 (80%), Positives = 35/40 (87%)
 Frame = -3

Query: 211 HNGSCPSSRTLLSTTSFQTKFYHNISLSWNRYGNDSIMES 92
           ++GSCP SRTLLSTTSFQTKFYHNI   WN+YG DSIMES
Sbjct: 11  NDGSCPLSRTLLSTTSFQTKFYHNIPQFWNQYGVDSIMES 50


>ref|YP_009175987.1| ribosomal protein S16 (chloroplast) [Ficus racemosa]
           gi|937500929|gb|ALI30688.1| ribosomal protein S16
           (chloroplast) [Ficus racemosa]
          Length = 117

 Score = 62.8 bits (151), Expect = 4e-07
 Identities = 30/40 (75%), Positives = 34/40 (85%)
 Frame = +1

Query: 316 IVHDGARVESIDSFLGGRDLGLMSINKLEQLRKYIFDIEI 435
           I+HDGAR E IDSF GG++LGL+SINKL QL K IFDIEI
Sbjct: 4   IIHDGARAERIDSFFGGKNLGLVSINKLRQLCKSIFDIEI 43