BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00018618
         (436 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_012452135.1| PREDICTED: replication factor C subunit 4 [G...    69   2e-09
gb|KJB64514.1| hypothetical protein B456_010G052800 [Gossypium r...    69   2e-09
gb|KHG05393.1| Replication factor C subunit 4 [Gossypium arboreum]     69   2e-09
ref|XP_007019151.1| ATPase family associated with various cellul...    67   5e-09
ref|XP_012078274.1| PREDICTED: replication factor C subunit 2 is...    65   1e-08
ref|XP_012078273.1| PREDICTED: replication factor C subunit 2 is...    65   1e-08
ref|XP_010063937.1| PREDICTED: replication factor C subunit 2 [E...    65   1e-08
gb|KCW71234.1| hypothetical protein EUGRSUZ_F04332 [Eucalyptus g...    65   1e-08
ref|XP_002520330.1| replication factor C / DNA polymerase III ga...    64   4e-08
ref|XP_010269007.1| PREDICTED: replication factor C subunit 2 is...    63   7e-08
ref|XP_010269006.1| PREDICTED: replication factor C subunit 2 is...    63   7e-08
ref|XP_010269005.1| PREDICTED: replication factor C subunit 2 is...    63   7e-08
ref|XP_011003421.1| PREDICTED: replication factor C subunit 2 [P...    63   1e-07
ref|XP_002307456.1| replication factor C 37 kDa family protein [...    62   2e-07
ref|XP_002285874.1| PREDICTED: replication factor C subunit 4 [V...    62   2e-07
emb|CAN83520.1| hypothetical protein VITISV_019805 [Vitis vinifera]    62   2e-07
ref|XP_006829310.2| PREDICTED: replication factor C subunit 2 is...    61   3e-07
gb|ERM96726.1| hypothetical protein AMTR_s00202p00012570, partia...    61   3e-07
ref|XP_008219600.1| PREDICTED: replication factor C subunit 2 [P...    60   8e-07
ref|XP_010930747.1| PREDICTED: replication factor C subunit 2 [E...    59   1e-06

>ref|XP_012452135.1| PREDICTED: replication factor C subunit 4 [Gossypium raimondii]
           gi|763797561|gb|KJB64516.1| hypothetical protein
           B456_010G052800 [Gossypium raimondii]
          Length = 342

 Score = 68.6 bits (166), Expect = 2e-09
 Identities = 32/33 (96%), Positives = 33/33 (100%)
 Frame = -3

Query: 434 RLVDGADEYLQLLDVASNTMRALCNMPEEFSFE 336
           RLVDGADEYLQLLDVASNTMRALCNMP+EFSFE
Sbjct: 309 RLVDGADEYLQLLDVASNTMRALCNMPQEFSFE 341


>gb|KJB64514.1| hypothetical protein B456_010G052800 [Gossypium raimondii]
          Length = 225

 Score = 68.6 bits (166), Expect = 2e-09
 Identities = 32/33 (96%), Positives = 33/33 (100%)
 Frame = -3

Query: 434 RLVDGADEYLQLLDVASNTMRALCNMPEEFSFE 336
           RLVDGADEYLQLLDVASNTMRALCNMP+EFSFE
Sbjct: 192 RLVDGADEYLQLLDVASNTMRALCNMPQEFSFE 224


>gb|KHG05393.1| Replication factor C subunit 4 [Gossypium arboreum]
          Length = 186

 Score = 68.6 bits (166), Expect = 2e-09
 Identities = 32/33 (96%), Positives = 33/33 (100%)
 Frame = -3

Query: 434 RLVDGADEYLQLLDVASNTMRALCNMPEEFSFE 336
           RLVDGADEYLQLLDVASNTMRALCNMP+EFSFE
Sbjct: 153 RLVDGADEYLQLLDVASNTMRALCNMPQEFSFE 185


>ref|XP_007019151.1| ATPase family associated with various cellular activities (AAA)
           [Theobroma cacao] gi|508724479|gb|EOY16376.1| ATPase
           family associated with various cellular activities (AAA)
           [Theobroma cacao]
          Length = 345

 Score = 67.0 bits (162), Expect = 5e-09
 Identities = 31/34 (91%), Positives = 33/34 (97%)
 Frame = -3

Query: 434 RLVDGADEYLQLLDVASNTMRALCNMPEEFSFEN 333
           RLVDGADEYLQLLDVASNTMRALCNMP+EF FE+
Sbjct: 312 RLVDGADEYLQLLDVASNTMRALCNMPQEFCFES 345


>ref|XP_012078274.1| PREDICTED: replication factor C subunit 2 isoform X2 [Jatropha
           curcas]
          Length = 336

 Score = 65.5 bits (158), Expect = 1e-08
 Identities = 30/32 (93%), Positives = 32/32 (100%)
 Frame = -3

Query: 431 LVDGADEYLQLLDVASNTMRALCNMPEEFSFE 336
           LVDGADEYLQLLDVASNTMRALCNMP+EFS+E
Sbjct: 304 LVDGADEYLQLLDVASNTMRALCNMPQEFSYE 335


>ref|XP_012078273.1| PREDICTED: replication factor C subunit 2 isoform X1 [Jatropha
           curcas] gi|643723221|gb|KDP32826.1| hypothetical protein
           JCGZ_12118 [Jatropha curcas]
          Length = 343

 Score = 65.5 bits (158), Expect = 1e-08
 Identities = 30/32 (93%), Positives = 32/32 (100%)
 Frame = -3

Query: 431 LVDGADEYLQLLDVASNTMRALCNMPEEFSFE 336
           LVDGADEYLQLLDVASNTMRALCNMP+EFS+E
Sbjct: 311 LVDGADEYLQLLDVASNTMRALCNMPQEFSYE 342


>ref|XP_010063937.1| PREDICTED: replication factor C subunit 2 [Eucalyptus grandis]
           gi|629105766|gb|KCW71235.1| hypothetical protein
           EUGRSUZ_F04332 [Eucalyptus grandis]
          Length = 342

 Score = 65.5 bits (158), Expect = 1e-08
 Identities = 30/32 (93%), Positives = 32/32 (100%)
 Frame = -3

Query: 431 LVDGADEYLQLLDVASNTMRALCNMPEEFSFE 336
           LVDGADEYLQLLDVASNTMRALCNMP+EFS+E
Sbjct: 310 LVDGADEYLQLLDVASNTMRALCNMPQEFSYE 341


>gb|KCW71234.1| hypothetical protein EUGRSUZ_F04332 [Eucalyptus grandis]
          Length = 362

 Score = 65.5 bits (158), Expect = 1e-08
 Identities = 30/32 (93%), Positives = 32/32 (100%)
 Frame = -3

Query: 431 LVDGADEYLQLLDVASNTMRALCNMPEEFSFE 336
           LVDGADEYLQLLDVASNTMRALCNMP+EFS+E
Sbjct: 330 LVDGADEYLQLLDVASNTMRALCNMPQEFSYE 361


>ref|XP_002520330.1| replication factor C / DNA polymerase III gamma-tau subunit,
           putative [Ricinus communis] gi|223540549|gb|EEF42116.1|
           replication factor C / DNA polymerase III gamma-tau
           subunit, putative [Ricinus communis]
          Length = 342

 Score = 63.9 bits (154), Expect = 4e-08
 Identities = 29/33 (87%), Positives = 32/33 (96%)
 Frame = -3

Query: 431 LVDGADEYLQLLDVASNTMRALCNMPEEFSFEN 333
           LVDGADEYLQLLDVASNTMRALCNMP+EF +E+
Sbjct: 310 LVDGADEYLQLLDVASNTMRALCNMPQEFPYES 342


>ref|XP_010269007.1| PREDICTED: replication factor C subunit 2 isoform X3 [Nelumbo
           nucifera]
          Length = 313

 Score = 63.2 bits (152), Expect = 7e-08
 Identities = 29/32 (90%), Positives = 31/32 (96%)
 Frame = -3

Query: 431 LVDGADEYLQLLDVASNTMRALCNMPEEFSFE 336
           LVDGADEYLQL+DVASNTMRALCNMP EFS+E
Sbjct: 282 LVDGADEYLQLMDVASNTMRALCNMPMEFSYE 313


>ref|XP_010269006.1| PREDICTED: replication factor C subunit 2 isoform X2 [Nelumbo
           nucifera]
          Length = 341

 Score = 63.2 bits (152), Expect = 7e-08
 Identities = 29/32 (90%), Positives = 31/32 (96%)
 Frame = -3

Query: 431 LVDGADEYLQLLDVASNTMRALCNMPEEFSFE 336
           LVDGADEYLQL+DVASNTMRALCNMP EFS+E
Sbjct: 310 LVDGADEYLQLMDVASNTMRALCNMPMEFSYE 341


>ref|XP_010269005.1| PREDICTED: replication factor C subunit 2 isoform X1 [Nelumbo
           nucifera]
          Length = 344

 Score = 63.2 bits (152), Expect = 7e-08
 Identities = 29/32 (90%), Positives = 31/32 (96%)
 Frame = -3

Query: 431 LVDGADEYLQLLDVASNTMRALCNMPEEFSFE 336
           LVDGADEYLQL+DVASNTMRALCNMP EFS+E
Sbjct: 313 LVDGADEYLQLMDVASNTMRALCNMPMEFSYE 344


>ref|XP_011003421.1| PREDICTED: replication factor C subunit 2 [Populus euphratica]
          Length = 342

 Score = 62.8 bits (151), Expect = 1e-07
 Identities = 28/32 (87%), Positives = 31/32 (96%)
 Frame = -3

Query: 431 LVDGADEYLQLLDVASNTMRALCNMPEEFSFE 336
           LVDGADEYLQLLDV SNTMRALCNMP+EFS++
Sbjct: 310 LVDGADEYLQLLDVVSNTMRALCNMPQEFSYD 341


>ref|XP_002307456.1| replication factor C 37 kDa family protein [Populus trichocarpa]
           gi|222856905|gb|EEE94452.1| replication factor C 37 kDa
           family protein [Populus trichocarpa]
          Length = 342

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 27/32 (84%), Positives = 31/32 (96%)
 Frame = -3

Query: 431 LVDGADEYLQLLDVASNTMRALCNMPEEFSFE 336
           LVDGADEYLQLLDV SNTMR+LCNMP+EFS++
Sbjct: 310 LVDGADEYLQLLDVVSNTMRSLCNMPQEFSYD 341


>ref|XP_002285874.1| PREDICTED: replication factor C subunit 4 [Vitis vinifera]
           gi|302141781|emb|CBI18984.3| unnamed protein product
           [Vitis vinifera]
          Length = 341

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 29/33 (87%), Positives = 30/33 (90%)
 Frame = -3

Query: 431 LVDGADEYLQLLDVASNTMRALCNMPEEFSFEN 333
           LVDGADEYLQLLDVASN MRALCNMPEEF  E+
Sbjct: 309 LVDGADEYLQLLDVASNAMRALCNMPEEFPHES 341


>emb|CAN83520.1| hypothetical protein VITISV_019805 [Vitis vinifera]
          Length = 341

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 29/33 (87%), Positives = 30/33 (90%)
 Frame = -3

Query: 431 LVDGADEYLQLLDVASNTMRALCNMPEEFSFEN 333
           LVDGADEYLQLLDVASN MRALCNMPEEF  E+
Sbjct: 309 LVDGADEYLQLLDVASNAMRALCNMPEEFPHES 341


>ref|XP_006829310.2| PREDICTED: replication factor C subunit 2 isoform X1 [Amborella
           trichopoda] gi|769822766|ref|XP_011629124.1| PREDICTED:
           replication factor C subunit 2 isoform X2 [Amborella
           trichopoda]
          Length = 340

 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 27/30 (90%), Positives = 30/30 (100%)
 Frame = -3

Query: 431 LVDGADEYLQLLDVASNTMRALCNMPEEFS 342
           L+DGADEYLQLLDVASNTMRA+CNMP+EFS
Sbjct: 310 LIDGADEYLQLLDVASNTMRAICNMPQEFS 339


>gb|ERM96726.1| hypothetical protein AMTR_s00202p00012570, partial [Amborella
           trichopoda]
          Length = 341

 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 27/30 (90%), Positives = 30/30 (100%)
 Frame = -3

Query: 431 LVDGADEYLQLLDVASNTMRALCNMPEEFS 342
           L+DGADEYLQLLDVASNTMRA+CNMP+EFS
Sbjct: 311 LIDGADEYLQLLDVASNTMRAICNMPQEFS 340


>ref|XP_008219600.1| PREDICTED: replication factor C subunit 2 [Prunus mume]
          Length = 339

 Score = 59.7 bits (143), Expect = 8e-07
 Identities = 27/31 (87%), Positives = 30/31 (96%)
 Frame = -3

Query: 434 RLVDGADEYLQLLDVASNTMRALCNMPEEFS 342
           RLVDGADEYLQLLDVAS+ MRA+CNMPE+FS
Sbjct: 309 RLVDGADEYLQLLDVASSVMRAMCNMPEDFS 339


>ref|XP_010930747.1| PREDICTED: replication factor C subunit 2 [Elaeis guineensis]
          Length = 341

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 26/32 (81%), Positives = 30/32 (93%)
 Frame = -3

Query: 431 LVDGADEYLQLLDVASNTMRALCNMPEEFSFE 336
           L+DGADEYLQL+DVAS+TMRALCNMPEE  F+
Sbjct: 310 LIDGADEYLQLMDVASHTMRALCNMPEELRFD 341