BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00018006
         (263 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308947.1| 3' exoribonuclease domain 1-containing famil...    74   4e-11
ref|XP_011048048.1| PREDICTED: exosome complex component RRP43-l...    74   6e-11
emb|CDP08415.1| unnamed protein product [Coffea canephora]             74   6e-11
ref|XP_006381009.1| hypothetical protein POPTR_0006s04970g [Popu...    74   6e-11
emb|CDP19205.1| unnamed protein product [Coffea canephora]             73   1e-10
ref|XP_002322717.1| 3' exoribonuclease domain 1-containing famil...    73   1e-10
ref|XP_006373782.1| hypothetical protein POPTR_0016s05590g [Popu...    73   1e-10
ref|XP_009780009.1| PREDICTED: exosome complex component RRP43 [...    72   2e-10
ref|XP_009597188.1| PREDICTED: exosome complex component RRP43 [...    72   2e-10
ref|XP_002532079.1| exosome complex exonuclease rrp43, putative ...    70   8e-10
ref|XP_011033330.1| PREDICTED: exosome complex component RRP43-l...    69   2e-09
gb|KCW87871.1| hypothetical protein EUGRSUZ_A00266 [Eucalyptus g...    68   2e-09
gb|KCW87870.1| hypothetical protein EUGRSUZ_A00265 [Eucalyptus g...    68   2e-09
gb|KHN14032.1| Exosome complex component RRP43 [Glycine soja]          68   3e-09
ref|NP_001275073.1| 3'-5'-exoribonuclease/RNA binding protein-li...    68   3e-09
ref|XP_006351314.1| PREDICTED: exosome complex component RRP43 [...    68   3e-09
ref|XP_003531860.1| PREDICTED: exosome complex component RRP43-l...    68   3e-09
ref|XP_008460773.1| PREDICTED: exosome complex component RRP43 i...    67   7e-09
ref|XP_008460772.1| PREDICTED: exosome complex component RRP43 i...    67   7e-09
emb|CBI29839.3| unnamed protein product [Vitis vinifera]               65   2e-08

>ref|XP_002308947.1| 3' exoribonuclease domain 1-containing family protein [Populus
           trichocarpa] gi|222854923|gb|EEE92470.1| 3'
           exoribonuclease domain 1-containing family protein
           [Populus trichocarpa]
          Length = 318

 Score = 73.9 bits (180), Expect = 4e-11
 Identities = 38/58 (65%), Positives = 44/58 (75%), Gaps = 1/58 (1%)
 Frame = -2

Query: 232 CKFQL-YVSLNDDGRVELVSEGSDGGKLETEPVNKDKRTLKLRSIPFSLTCMLRRNRI 62
           C  Q+  VSLNDDG++ LVSE  DG KLE EPVNK+KR L L SIPFSLTC+L +N I
Sbjct: 190 CAVQIPIVSLNDDGKIVLVSEEDDGTKLEEEPVNKEKRKLTLSSIPFSLTCILHKNYI 247


>ref|XP_011048048.1| PREDICTED: exosome complex component RRP43-like [Populus
           euphratica] gi|743909153|ref|XP_011048049.1| PREDICTED:
           exosome complex component RRP43-like [Populus
           euphratica]
          Length = 303

 Score = 73.6 bits (179), Expect = 6e-11
 Identities = 36/51 (70%), Positives = 41/51 (80%)
 Frame = -2

Query: 214 VSLNDDGRVELVSEGSDGGKLETEPVNKDKRTLKLRSIPFSLTCMLRRNRI 62
           VSLNDDG++ LVSE  DG KLE EPVNK+KR L L SIPFSLTC+L +N I
Sbjct: 182 VSLNDDGKIVLVSEEDDGTKLEDEPVNKEKRKLTLSSIPFSLTCILHKNYI 232


>emb|CDP08415.1| unnamed protein product [Coffea canephora]
          Length = 310

 Score = 73.6 bits (179), Expect = 6e-11
 Identities = 35/51 (68%), Positives = 42/51 (82%)
 Frame = -2

Query: 214 VSLNDDGRVELVSEGSDGGKLETEPVNKDKRTLKLRSIPFSLTCMLRRNRI 62
           VSLND+GR+ LVSE + GGKLE EPVNK+KR L L +IPFSLTC+L +N I
Sbjct: 189 VSLNDEGRIVLVSEDNGGGKLEKEPVNKEKRKLNLATIPFSLTCVLHKNYI 239


>ref|XP_006381009.1| hypothetical protein POPTR_0006s04970g [Populus trichocarpa]
           gi|550335486|gb|ERP58806.1| hypothetical protein
           POPTR_0006s04970g [Populus trichocarpa]
          Length = 303

 Score = 73.6 bits (179), Expect = 6e-11
 Identities = 36/51 (70%), Positives = 41/51 (80%)
 Frame = -2

Query: 214 VSLNDDGRVELVSEGSDGGKLETEPVNKDKRTLKLRSIPFSLTCMLRRNRI 62
           VSLNDDG++ LVSE  DG KLE EPVNK+KR L L SIPFSLTC+L +N I
Sbjct: 182 VSLNDDGKIVLVSEEDDGTKLEEEPVNKEKRKLTLSSIPFSLTCILHKNYI 232


>emb|CDP19205.1| unnamed protein product [Coffea canephora]
          Length = 172

 Score = 72.8 bits (177), Expect = 1e-10
 Identities = 34/51 (66%), Positives = 42/51 (82%)
 Frame = -2

Query: 214 VSLNDDGRVELVSEGSDGGKLETEPVNKDKRTLKLRSIPFSLTCMLRRNRI 62
           VSLND+GR+ L+SE + GGKLE EPVNK+KR LKL +IP SLTC+L +N I
Sbjct: 51  VSLNDEGRIVLISEDNGGGKLEKEPVNKEKRKLKLATIPLSLTCILHKNYI 101


>ref|XP_002322717.1| 3' exoribonuclease domain 1-containing family protein [Populus
           trichocarpa] gi|222867347|gb|EEF04478.1| 3'
           exoribonuclease domain 1-containing family protein
           [Populus trichocarpa]
          Length = 439

 Score = 72.8 bits (177), Expect = 1e-10
 Identities = 35/51 (68%), Positives = 41/51 (80%)
 Frame = -2

Query: 214 VSLNDDGRVELVSEGSDGGKLETEPVNKDKRTLKLRSIPFSLTCMLRRNRI 62
           VSLNDDG++ LVSE  +G KLE EPVNK+KR L L SIPFSLTC+L +N I
Sbjct: 202 VSLNDDGKIVLVSEEDEGAKLEKEPVNKEKRKLTLSSIPFSLTCILHKNYI 252


>ref|XP_006373782.1| hypothetical protein POPTR_0016s05590g [Populus trichocarpa]
           gi|550320907|gb|ERP51579.1| hypothetical protein
           POPTR_0016s05590g [Populus trichocarpa]
          Length = 323

 Score = 72.8 bits (177), Expect = 1e-10
 Identities = 35/51 (68%), Positives = 41/51 (80%)
 Frame = -2

Query: 214 VSLNDDGRVELVSEGSDGGKLETEPVNKDKRTLKLRSIPFSLTCMLRRNRI 62
           VSLNDDG++ LVSE  +G KLE EPVNK+KR L L SIPFSLTC+L +N I
Sbjct: 202 VSLNDDGKIVLVSEEDEGAKLEKEPVNKEKRKLTLSSIPFSLTCILHKNYI 252


>ref|XP_009780009.1| PREDICTED: exosome complex component RRP43 [Nicotiana sylvestris]
           gi|698422013|ref|XP_009780016.1| PREDICTED: exosome
           complex component RRP43 [Nicotiana sylvestris]
           gi|698422019|ref|XP_009780020.1| PREDICTED: exosome
           complex component RRP43 [Nicotiana sylvestris]
           gi|698422026|ref|XP_009780025.1| PREDICTED: exosome
           complex component RRP43 [Nicotiana sylvestris]
          Length = 303

 Score = 72.0 bits (175), Expect = 2e-10
 Identities = 36/51 (70%), Positives = 41/51 (80%)
 Frame = -2

Query: 214 VSLNDDGRVELVSEGSDGGKLETEPVNKDKRTLKLRSIPFSLTCMLRRNRI 62
           VSLNDDGR+ LVSE +  GKLE EPVNK+KR LKL S PFSLTC+L +N I
Sbjct: 182 VSLNDDGRIVLVSEDNVRGKLEKEPVNKEKRKLKLNSPPFSLTCILHKNYI 232


>ref|XP_009597188.1| PREDICTED: exosome complex component RRP43 [Nicotiana
           tomentosiformis]
          Length = 303

 Score = 72.0 bits (175), Expect = 2e-10
 Identities = 36/51 (70%), Positives = 41/51 (80%)
 Frame = -2

Query: 214 VSLNDDGRVELVSEGSDGGKLETEPVNKDKRTLKLRSIPFSLTCMLRRNRI 62
           VSLNDDGR+ LVSE +  GKLE EPVNK+KR LKL S PFSLTC+L +N I
Sbjct: 182 VSLNDDGRIVLVSEDNVRGKLEKEPVNKEKRKLKLNSPPFSLTCILHKNYI 232


>ref|XP_002532079.1| exosome complex exonuclease rrp43, putative [Ricinus communis]
           gi|223528261|gb|EEF30313.1| exosome complex exonuclease
           rrp43, putative [Ricinus communis]
          Length = 303

 Score = 69.7 bits (169), Expect = 8e-10
 Identities = 33/51 (64%), Positives = 42/51 (82%)
 Frame = -2

Query: 214 VSLNDDGRVELVSEGSDGGKLETEPVNKDKRTLKLRSIPFSLTCMLRRNRI 62
           VSLNDDG+V +VS+ ++GGK E E VNK+KR L LRS+PFSLTC+L +N I
Sbjct: 182 VSLNDDGKVVVVSDENEGGKREKEAVNKEKRKLTLRSLPFSLTCVLHKNYI 232


>ref|XP_011033330.1| PREDICTED: exosome complex component RRP43-like [Populus
           euphratica] gi|743869618|ref|XP_011033331.1| PREDICTED:
           exosome complex component RRP43-like [Populus
           euphratica] gi|743869620|ref|XP_011033332.1| PREDICTED:
           exosome complex component RRP43-like [Populus
           euphratica] gi|743869624|ref|XP_011033333.1| PREDICTED:
           exosome complex component RRP43-like [Populus
           euphratica]
          Length = 302

 Score = 68.6 bits (166), Expect = 2e-09
 Identities = 35/51 (68%), Positives = 41/51 (80%)
 Frame = -2

Query: 214 VSLNDDGRVELVSEGSDGGKLETEPVNKDKRTLKLRSIPFSLTCMLRRNRI 62
           VSLNDDG++ LVSE  +G KLE EPVNK+KR L L SIPFSLTC+L +N I
Sbjct: 182 VSLNDDGKIVLVSEEDEGAKLE-EPVNKEKRKLTLSSIPFSLTCILHKNYI 231


>gb|KCW87871.1| hypothetical protein EUGRSUZ_A00266 [Eucalyptus grandis]
          Length = 249

 Score = 68.2 bits (165), Expect = 2e-09
 Identities = 33/53 (62%), Positives = 43/53 (81%)
 Frame = -2

Query: 220 LYVSLNDDGRVELVSEGSDGGKLETEPVNKDKRTLKLRSIPFSLTCMLRRNRI 62
           L VSLND+GR+ +VSE  +G KL+ EPV+K++R L L+SIPFSLTC+L RN I
Sbjct: 139 LVVSLNDEGRMVMVSEELEGEKLDKEPVDKERRKLLLKSIPFSLTCILHRNYI 191


>gb|KCW87870.1| hypothetical protein EUGRSUZ_A00265 [Eucalyptus grandis]
          Length = 266

 Score = 68.2 bits (165), Expect = 2e-09
 Identities = 33/54 (61%), Positives = 43/54 (79%)
 Frame = -2

Query: 214 VSLNDDGRVELVSEGSDGGKLETEPVNKDKRTLKLRSIPFSLTCMLRRNRISRY 53
           VSLND+GR+ +VSE  +G KL+ EPV+K++R L L+SIPFSLTC+L RN I  Y
Sbjct: 175 VSLNDEGRMVMVSEELEGEKLDKEPVDKERRKLLLKSIPFSLTCILHRNYILPY 228


>gb|KHN14032.1| Exosome complex component RRP43 [Glycine soja]
          Length = 302

 Score = 67.8 bits (164), Expect = 3e-09
 Identities = 34/51 (66%), Positives = 41/51 (80%)
 Frame = -2

Query: 214 VSLNDDGRVELVSEGSDGGKLETEPVNKDKRTLKLRSIPFSLTCMLRRNRI 62
           V++NDDG++ LVSE  DG K E EPVNK+KR L LRSIPFSLTC+L +N I
Sbjct: 182 VAMNDDGKIVLVSE-EDGQKREQEPVNKEKRKLTLRSIPFSLTCILHKNYI 231


>ref|NP_001275073.1| 3'-5'-exoribonuclease/RNA binding protein-like protein [Solanum
           tuberosum] gi|83283957|gb|ABC01886.1|
           3'-5'-exoribonuclease/RNA binding protein-like protein
           [Solanum tuberosum]
          Length = 314

 Score = 67.8 bits (164), Expect = 3e-09
 Identities = 34/51 (66%), Positives = 40/51 (78%)
 Frame = -2

Query: 214 VSLNDDGRVELVSEGSDGGKLETEPVNKDKRTLKLRSIPFSLTCMLRRNRI 62
           VSLNDDGR+ LVSE +   KLE EPVN +KR LKL S+PFSLTC+L +N I
Sbjct: 182 VSLNDDGRIVLVSEDTVRLKLEKEPVNTEKRKLKLNSLPFSLTCILHKNYI 232


>ref|XP_006351314.1| PREDICTED: exosome complex component RRP43 [Solanum tuberosum]
          Length = 303

 Score = 67.8 bits (164), Expect = 3e-09
 Identities = 34/51 (66%), Positives = 40/51 (78%)
 Frame = -2

Query: 214 VSLNDDGRVELVSEGSDGGKLETEPVNKDKRTLKLRSIPFSLTCMLRRNRI 62
           VSLNDDGR+ LVSE +   KLE EPVN +KR LKL S+PFSLTC+L +N I
Sbjct: 182 VSLNDDGRIVLVSEDTVRLKLEKEPVNTEKRKLKLNSLPFSLTCILHKNYI 232


>ref|XP_003531860.1| PREDICTED: exosome complex component RRP43-like [Glycine max]
           gi|947096468|gb|KRH45053.1| hypothetical protein
           GLYMA_08G246800 [Glycine max]
          Length = 302

 Score = 67.8 bits (164), Expect = 3e-09
 Identities = 34/51 (66%), Positives = 41/51 (80%)
 Frame = -2

Query: 214 VSLNDDGRVELVSEGSDGGKLETEPVNKDKRTLKLRSIPFSLTCMLRRNRI 62
           V++NDDG++ LVSE  DG K E EPVNK+KR L LRSIPFSLTC+L +N I
Sbjct: 182 VAMNDDGKIVLVSE-EDGQKREQEPVNKEKRKLTLRSIPFSLTCILHKNYI 231


>ref|XP_008460773.1| PREDICTED: exosome complex component RRP43 isoform X2 [Cucumis
           melo] gi|659121685|ref|XP_008460774.1| PREDICTED:
           exosome complex component RRP43 isoform X2 [Cucumis
           melo]
          Length = 304

 Score = 66.6 bits (161), Expect = 7e-09
 Identities = 32/51 (62%), Positives = 37/51 (72%)
 Frame = -2

Query: 214 VSLNDDGRVELVSEGSDGGKLETEPVNKDKRTLKLRSIPFSLTCMLRRNRI 62
           V+LNDDGRV  VSE   G   E EPVNK+KR LKL S+PFSLTC+L +  I
Sbjct: 183 VALNDDGRVVFVSEEEGGENFEKEPVNKEKRKLKLNSVPFSLTCLLHKKYI 233


>ref|XP_008460772.1| PREDICTED: exosome complex component RRP43 isoform X1 [Cucumis
           melo]
          Length = 316

 Score = 66.6 bits (161), Expect = 7e-09
 Identities = 32/51 (62%), Positives = 37/51 (72%)
 Frame = -2

Query: 214 VSLNDDGRVELVSEGSDGGKLETEPVNKDKRTLKLRSIPFSLTCMLRRNRI 62
           V+LNDDGRV  VSE   G   E EPVNK+KR LKL S+PFSLTC+L +  I
Sbjct: 195 VALNDDGRVVFVSEEEGGENFEKEPVNKEKRKLKLNSVPFSLTCLLHKKYI 245


>emb|CBI29839.3| unnamed protein product [Vitis vinifera]
          Length = 311

 Score = 65.5 bits (158), Expect = 2e-08
 Identities = 32/51 (62%), Positives = 40/51 (78%)
 Frame = -2

Query: 214 VSLNDDGRVELVSEGSDGGKLETEPVNKDKRTLKLRSIPFSLTCMLRRNRI 62
           VSLN++GRV +VSE ++ GK E EPVNK KR L L S+PFSLTC+L +N I
Sbjct: 190 VSLNEEGRVVVVSEENEEGKSEKEPVNKGKRKLTLSSLPFSLTCILHKNYI 240