BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00017808
         (503 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010513219.1| PREDICTED: uncharacterized protein LOC104789...    88   7e-32
ref|XP_010472251.1| PREDICTED: uncharacterized protein LOC104751...    82   3e-31
ref|XP_010472440.1| PREDICTED: uncharacterized protein LOC104752...    82   3e-31
ref|XP_010485231.1| PREDICTED: uncharacterized protein LOC104763...    90   4e-31
ref|XP_010451797.1| PREDICTED: uncharacterized protein LOC104733...    85   6e-31
gb|AAB82639.1| putative non-LTR retroelement reverse transcripta...    86   8e-31
ref|XP_010480531.1| PREDICTED: uncharacterized protein LOC104759...    80   2e-30
ref|XP_013709208.1| PREDICTED: uncharacterized protein LOC106412...    86   2e-30
ref|XP_013654036.1| PREDICTED: uncharacterized protein LOC106358...    86   2e-30
ref|XP_010462992.1| PREDICTED: uncharacterized protein LOC104743...    80   4e-30
ref|XP_010495329.1| PREDICTED: uncharacterized protein LOC104772...    81   5e-30
ref|XP_013654011.1| PREDICTED: uncharacterized protein LOC106358...    86   7e-30
gb|AAD17398.1| putative non-LTR retroelement reverse transcripta...    79   1e-29
ref|XP_012087222.1| PREDICTED: uncharacterized protein LOC105646...    87   1e-29
dbj|BAF01759.1| putative non-LTR retroelement reverse transcript...    79   1e-29
ref|XP_010495217.1| PREDICTED: uncharacterized protein LOC104772...    84   1e-29
ref|XP_009103824.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...    93   2e-29
ref|XP_013664998.1| PREDICTED: uncharacterized protein LOC106369...    93   2e-29
ref|XP_013730329.1| PREDICTED: uncharacterized protein LOC106434...    89   2e-29
ref|XP_009149314.1| PREDICTED: uncharacterized protein LOC103872...    79   2e-29

>ref|XP_010513219.1| PREDICTED: uncharacterized protein LOC104789182 [Camelina sativa]
          Length = 1754

 Score = 88.2 bits (217), Expect(2) = 7e-32
 Identities = 46/100 (46%), Positives = 66/100 (66%), Gaps = 4/100 (4%)
 Frame = -3

Query: 501  VGVDLTSAINHFFSTGIL*SIF----ITLIPKKDHAAKASDFRPMSLCNVIHKVITKLMA 334
            +G  LT  +  FFSTG +        I LIPKK  A +  DFRP+SLCNVI+K+I K++A
Sbjct: 902  MGYQLTGMVQKFFSTGHMEEDMNRTNICLIPKKQRADRLVDFRPISLCNVIYKIIGKVVA 961

Query: 333  NRLSCLLPKLVGHEQSAFIKGKLIQHNIIMSLELIRGLLT 214
            NR+  +LP ++   Q+AFI+G+LI  NI+++ E+I  L T
Sbjct: 962  NRMKKVLPHIISETQAAFIQGRLISDNILVAHEMIHALNT 1001



 Score = 75.9 bits (185), Expect(2) = 7e-32
 Identities = 38/74 (51%), Positives = 48/74 (64%), Gaps = 1/74 (1%)
 Frame = -2

Query: 220  TNKKGSKHF-ALKVDLTKAYDSVKWGSFCNRLCMMGFCCRWIQWVMECSKSTWYSILING 44
            TN K S+ + A+K D++KAYD V+WG     +  +GF  RWI  VMEC K+  Y +LIN 
Sbjct: 1001 TNAKCSEEYIAVKTDISKAYDRVEWGFLEKTMLTLGFDERWINLVMECVKTVRYQVLINR 1060

Query: 43   SPHGFFKPGRGLRQ 2
            SP G  KP RGLRQ
Sbjct: 1061 SPQGEIKPSRGLRQ 1074


>ref|XP_010472251.1| PREDICTED: uncharacterized protein LOC104751896 [Camelina sativa]
          Length = 1160

 Score = 82.4 bits (202), Expect(2) = 3e-31
 Identities = 38/74 (51%), Positives = 49/74 (66%), Gaps = 1/74 (1%)
 Frame = -2

Query: 220 TNKKGSKHF-ALKVDLTKAYDSVKWGSFCNRLCMMGFCCRWIQWVMECSKSTWYSILING 44
           TN K +K   A+K D++KAYD V+W    +    MGF   WIQW+M C +S  Y++LING
Sbjct: 400 TNSKFNKDMIAIKTDMSKAYDRVEWDFLEHLFVKMGFNSTWIQWIMSCVRSVSYTVLING 459

Query: 43  SPHGFFKPGRGLRQ 2
           S HGF KP RG+RQ
Sbjct: 460 SSHGFVKPSRGIRQ 473



 Score = 79.7 bits (195), Expect(2) = 3e-31
 Identities = 39/100 (39%), Positives = 63/100 (63%), Gaps = 4/100 (4%)
 Frame = -3

Query: 501 VGVDLTSAINHFFSTGIL*SIF----ITLIPKKDHAAKASDFRPMSLCNVIHKVITKLMA 334
           +G ++ S +  FF +G +   +    I LIPKK +A   +D RP+SLC+V++K+++ ++ 
Sbjct: 301 IGKEIVSEVEQFFQSGTMLQDWNHTQICLIPKKPNANAMTDMRPISLCSVLYKIVSNVLC 360

Query: 333 NRLSCLLPKLVGHEQSAFIKGKLIQHNIIMSLELIRGLLT 214
            RL   LPKLV   Q AF+ G+LI  NI+++ E+I  L T
Sbjct: 361 TRLKRCLPKLVSETQGAFVSGRLISDNILIAHEIIHALRT 400


>ref|XP_010472440.1| PREDICTED: uncharacterized protein LOC104752070 [Camelina sativa]
          Length = 1126

 Score = 81.6 bits (200), Expect(2) = 3e-31
 Identities = 40/100 (40%), Positives = 66/100 (66%), Gaps = 4/100 (4%)
 Frame = -3

Query: 501 VGVDLTSAINHFFSTGIL*SIF----ITLIPKKDHAAKASDFRPMSLCNVIHKVITKLMA 334
           VG D  + +  FF TG++   +    + LIPKK +A + SD RP+SLC+V++K+++K++ 
Sbjct: 323 VGADNIAEVQGFFQTGVMPQGWNHTQLCLIPKKPNANQMSDMRPISLCSVLYKIVSKVLC 382

Query: 333 NRLSCLLPKLVGHEQSAFIKGKLIQHNIIMSLELIRGLLT 214
           +RL+  LP LV   Q AF+ G+LI  NI+++ E++  L T
Sbjct: 383 SRLTRCLPDLVSETQGAFVAGRLISDNILIAHEIVHALKT 422



 Score = 80.5 bits (197), Expect(2) = 3e-31
 Identities = 36/74 (48%), Positives = 48/74 (64%), Gaps = 1/74 (1%)
 Frame = -2

Query: 220 TNKKGSKHF-ALKVDLTKAYDSVKWGSFCNRLCMMGFCCRWIQWVMECSKSTWYSILING 44
           TN K  +HF A+K D++KAYD V+W         MGF  +W+QW+M C +S  +S+LING
Sbjct: 422 TNVKFDEHFIAVKTDMSKAYDRVEWDFLEKLFIKMGFAVKWVQWIMMCVRSVSFSVLING 481

Query: 43  SPHGFFKPGRGLRQ 2
              G  KPGRG+RQ
Sbjct: 482 CDFGLIKPGRGIRQ 495


>ref|XP_010485231.1| PREDICTED: uncharacterized protein LOC104763574 [Camelina sativa]
          Length = 1808

 Score = 90.1 bits (222), Expect(2) = 4e-31
 Identities = 44/101 (43%), Positives = 68/101 (67%), Gaps = 4/101 (3%)
 Frame = -3

Query: 501  VGVDLTSAINHFFSTGIL*SIF----ITLIPKKDHAAKASDFRPMSLCNVIHKVITKLMA 334
            VG D+T  +  F  TG L        I LIPKK  A+K  DFRP+SLCNV++K+++KL+A
Sbjct: 912  VGEDITEMVRSFMRTGRLEEEINRTNICLIPKKMKASKLQDFRPISLCNVVYKIVSKLLA 971

Query: 333  NRLSCLLPKLVGHEQSAFIKGKLIQHNIIMSLELIRGLLTK 211
            +RL  +LP ++   Q+AF+KG+LI  NI+++ E++  L ++
Sbjct: 972  SRLKRILPNIISETQAAFVKGRLISDNILIAHEMLHALSSR 1012



 Score = 71.6 bits (174), Expect(2) = 4e-31
 Identities = 33/72 (45%), Positives = 44/72 (61%)
 Frame = -2

Query: 217  NKKGSKHFALKVDLTKAYDSVKWGSFCNRLCMMGFCCRWIQWVMECSKSTWYSILINGSP 38
            NK      A+K D++KAYD V+W    N +  +GF   WI+ VMEC K+  Y +LING P
Sbjct: 1013 NKCAENFIAIKTDISKAYDRVEWSFLGNAMTYLGFSGSWIRLVMECVKTVEYQVLINGVP 1072

Query: 37   HGFFKPGRGLRQ 2
            +   +P RGLRQ
Sbjct: 1073 YRDIQPTRGLRQ 1084


>ref|XP_010451797.1| PREDICTED: uncharacterized protein LOC104733977 [Camelina sativa]
          Length = 1377

 Score = 85.1 bits (209), Expect(2) = 6e-31
 Identities = 42/100 (42%), Positives = 66/100 (66%), Gaps = 4/100 (4%)
 Frame = -3

Query: 501 VGVDLTSAINHFFSTGIL*SIF----ITLIPKKDHAAKASDFRPMSLCNVIHKVITKLMA 334
           VG D+   +  FFSTG+L   +    + LIPKK +A + SD RP+SLC+V++K+++K++ 
Sbjct: 470 VGTDIIKEVQGFFSTGVLPQDWNHTQLCLIPKKPNANQMSDMRPISLCSVLYKIVSKVIC 529

Query: 333 NRLSCLLPKLVGHEQSAFIKGKLIQHNIIMSLELIRGLLT 214
            RL+  LP LV   Q AF+ G+LI  NI+++ E++  L T
Sbjct: 530 TRLTRCLPSLVSETQGAFVAGRLISDNILIAHEVVHALKT 569



 Score = 75.9 bits (185), Expect(2) = 6e-31
 Identities = 31/64 (48%), Positives = 45/64 (70%)
 Frame = -2

Query: 193 ALKVDLTKAYDSVKWGSFCNRLCMMGFCCRWIQWVMECSKSTWYSILINGSPHGFFKPGR 14
           A+K D++KAYD V+W    + L  MGF  +W+ W+M C +S  +S+LING  +G+ KPGR
Sbjct: 579 AVKTDMSKAYDRVEWDFLEHLLLKMGFHNQWVGWIMSCVRSVTFSVLINGGDYGYIKPGR 638

Query: 13  GLRQ 2
           G+RQ
Sbjct: 639 GIRQ 642


>gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1374

 Score = 86.3 bits (212), Expect(2) = 8e-31
 Identities = 47/98 (47%), Positives = 64/98 (65%), Gaps = 4/98 (4%)
 Frame = -3

Query: 501 VGVDLTSAINHFFSTGIL*SIF----ITLIPKKDHAAKASDFRPMSLCNVIHKVITKLMA 334
           +G  +T  +  FF +G +        I LIPK   A K +DFRP+SLCNVI+KVI KLMA
Sbjct: 463 MGDQITEMVQAFFRSGSIEEGMNKTNICLIPKILKAEKMTDFRPISLCNVIYKVIGKLMA 522

Query: 333 NRLSCLLPKLVGHEQSAFIKGKLIQHNIIMSLELIRGL 220
           NRL  +LP L+   Q+AF+KG+LI  NI+++ EL+  L
Sbjct: 523 NRLKKILPSLISETQAAFVKGRLISDNILIAHELLHAL 560



 Score = 74.3 bits (181), Expect(2) = 8e-31
 Identities = 34/72 (47%), Positives = 45/72 (62%)
 Frame = -2

Query: 217 NKKGSKHFALKVDLTKAYDSVKWGSFCNRLCMMGFCCRWIQWVMECSKSTWYSILINGSP 38
           NK   +  A+K D++KAYD V+W      +  +GF   WI+ +MEC KS  Y +LING+P
Sbjct: 564 NKCSEEFIAIKTDISKAYDRVEWPFLEKAMRGLGFADHWIRLIMECVKSVRYQVLINGTP 623

Query: 37  HGFFKPGRGLRQ 2
           HG   P RGLRQ
Sbjct: 624 HGEIIPSRGLRQ 635


>ref|XP_010480531.1| PREDICTED: uncharacterized protein LOC104759285 [Camelina sativa]
          Length = 1178

 Score = 80.1 bits (196), Expect(2) = 2e-30
 Identities = 38/74 (51%), Positives = 48/74 (64%), Gaps = 1/74 (1%)
 Frame = -2

Query: 220 TNKKGSKHF-ALKVDLTKAYDSVKWGSFCNRLCMMGFCCRWIQWVMECSKSTWYSILING 44
           TN K ++ F A+K D++KAYD V+W         MGF  +WIQWVM C +   YS+LING
Sbjct: 533 TNGKFNEEFIAVKTDMSKAYDRVEWDFLETLFTRMGFDAKWIQWVMTCVRLVSYSVLING 592

Query: 43  SPHGFFKPGRGLRQ 2
           S HGF  P RG+RQ
Sbjct: 593 SAHGFIVPNRGIRQ 606



 Score = 79.3 bits (194), Expect(2) = 2e-30
 Identities = 37/100 (37%), Positives = 64/100 (64%), Gaps = 4/100 (4%)
 Frame = -3

Query: 501 VGVDLTSAINHFFSTGIL*SIF----ITLIPKKDHAAKASDFRPMSLCNVIHKVITKLMA 334
           +G D+ S +  FF++G + + +    I LIPK  +     + RP+SLC+V++K+++ ++ 
Sbjct: 434 IGKDIISEVQGFFNSGTMPADWNHTQICLIPKTTNVNTMMNMRPISLCSVLYKIVSNILC 493

Query: 333 NRLSCLLPKLVGHEQSAFIKGKLIQHNIIMSLELIRGLLT 214
           +RL C LPKLV   Q AF+ G+LI  NI+++ E++  L T
Sbjct: 494 SRLKCCLPKLVSETQGAFVSGRLISDNILIAHEIVHALRT 533


>ref|XP_013709208.1| PREDICTED: uncharacterized protein LOC106412876 [Brassica napus]
          Length = 1037

 Score = 85.9 bits (211), Expect(2) = 2e-30
 Identities = 47/100 (47%), Positives = 67/100 (67%), Gaps = 4/100 (4%)
 Frame = -3

Query: 501 VGVDLTSAINHFFSTGIL*SIF----ITLIPKKDHAAKASDFRPMSLCNVIHKVITKLMA 334
           VG  LT  I  FF TGI+ S +    + LIPKK +A   +D RP+SLC+V++KVI+K++A
Sbjct: 133 VGDQLTKEILSFFETGIMPSEWNYTQLCLIPKKKNATLMTDLRPISLCSVMYKVISKILA 192

Query: 333 NRLSCLLPKLVGHEQSAFIKGKLIQHNIIMSLELIRGLLT 214
           +RL  +LP++V   QSAF+  +LI  NII++ E I  L T
Sbjct: 193 SRLKSILPEIVSPSQSAFVSDRLISDNIILAHESIHSLRT 232



 Score = 73.6 bits (179), Expect(2) = 2e-30
 Identities = 32/68 (47%), Positives = 42/68 (61%)
 Frame = -2

Query: 205 SKHFALKVDLTKAYDSVKWGSFCNRLCMMGFCCRWIQWVMECSKSTWYSILINGSPHGFF 26
           S   A K DL+KA+D V+W      L  +GF  RW+ W+MEC  +  YS+L+NG  +GF 
Sbjct: 238 SNFMAAKTDLSKAFDRVEWNYLKAILLSLGFHPRWVAWIMECVSTVKYSVLLNGQAYGFI 297

Query: 25  KPGRGLRQ 2
            P RGLRQ
Sbjct: 298 SPNRGLRQ 305


>ref|XP_013654036.1| PREDICTED: uncharacterized protein LOC106358780 [Brassica napus]
          Length = 1037

 Score = 85.9 bits (211), Expect(2) = 2e-30
 Identities = 47/100 (47%), Positives = 67/100 (67%), Gaps = 4/100 (4%)
 Frame = -3

Query: 501 VGVDLTSAINHFFSTGIL*SIF----ITLIPKKDHAAKASDFRPMSLCNVIHKVITKLMA 334
           VG  LT  I  FF TGI+ S +    + LIPKK +A   +D RP+SLC+V++KVI+K++A
Sbjct: 133 VGDQLTKEILSFFETGIMPSEWNYTQLCLIPKKKNATLMTDLRPISLCSVMYKVISKILA 192

Query: 333 NRLSCLLPKLVGHEQSAFIKGKLIQHNIIMSLELIRGLLT 214
           +RL  +LP++V   QSAF+  +LI  NII++ E I  L T
Sbjct: 193 SRLKSILPEIVSPSQSAFVSDRLISDNIILAHESIHSLRT 232



 Score = 73.6 bits (179), Expect(2) = 2e-30
 Identities = 32/68 (47%), Positives = 42/68 (61%)
 Frame = -2

Query: 205 SKHFALKVDLTKAYDSVKWGSFCNRLCMMGFCCRWIQWVMECSKSTWYSILINGSPHGFF 26
           S   A K DL+KA+D V+W      L  +GF  RW+ W+MEC  +  YS+L+NG  +GF 
Sbjct: 238 SNFMAAKTDLSKAFDRVEWNYLKAILLSLGFHPRWVAWIMECVSTVKYSVLLNGQAYGFI 297

Query: 25  KPGRGLRQ 2
            P RGLRQ
Sbjct: 298 SPNRGLRQ 305


>ref|XP_010462992.1| PREDICTED: uncharacterized protein LOC104743634 [Camelina sativa]
          Length = 782

 Score = 80.1 bits (196), Expect(2) = 4e-30
 Identities = 42/100 (42%), Positives = 63/100 (63%), Gaps = 4/100 (4%)
 Frame = -3

Query: 501 VGVDLTSAINHFFSTGIL*SIF----ITLIPKKDHAAKASDFRPMSLCNVIHKVITKLMA 334
           VG  +   +  FF TG L + +    I LIPKK + +K +D  P+SLC+VI+KV++K+M 
Sbjct: 13  VGPQVVQEVTQFFDTGSLPADWNFKQIYLIPKKPNPSKMTDMLPISLCSVIYKVVSKVMC 72

Query: 333 NRLSCLLPKLVGHEQSAFIKGKLIQHNIIMSLELIRGLLT 214
           NRL   LP +V   Q AF+ G+LI  NI+++ E++  L T
Sbjct: 73  NRLKEFLPDIVSATQGAFVAGRLISDNILLAHEMLHALRT 112



 Score = 78.2 bits (191), Expect(2) = 4e-30
 Identities = 35/74 (47%), Positives = 51/74 (68%), Gaps = 1/74 (1%)
 Frame = -2

Query: 220 TNKKGSKHFA-LKVDLTKAYDSVKWGSFCNRLCMMGFCCRWIQWVMECSKSTWYSILING 44
           TN +  + FA +K+D++KAYD V+W      L  +GF  +W++WVM C  S  YS+L+NG
Sbjct: 112 TNPQCDEDFAAIKIDMSKAYDRVEWRFLEELLIRLGFDIKWVKWVMVCVSSVSYSVLLNG 171

Query: 43  SPHGFFKPGRGLRQ 2
           S +G+F+P RGLRQ
Sbjct: 172 SSYGYFRPERGLRQ 185


>ref|XP_010495329.1| PREDICTED: uncharacterized protein LOC104772406 [Camelina sativa]
          Length = 1131

 Score = 81.3 bits (199), Expect(2) = 5e-30
 Identities = 42/100 (42%), Positives = 61/100 (61%), Gaps = 4/100 (4%)
 Frame = -3

Query: 501 VGVDLTSAINHFFSTGIL*S----IFITLIPKKDHAAKASDFRPMSLCNVIHKVITKLMA 334
           V  DL S +N FF      S      I LIPK     + ++ RP+SLCNV +KV++K++ 
Sbjct: 401 VKTDLVSLVNSFFEENAFESGLNQTHICLIPKVTKPTRMAELRPISLCNVGYKVLSKVLC 460

Query: 333 NRLSCLLPKLVGHEQSAFIKGKLIQHNIIMSLELIRGLLT 214
           NRL  +LP+L+   QSAF+ G+LI  NI+++ E+  GL T
Sbjct: 461 NRLKTILPRLISETQSAFVPGRLISDNILIAQEMFHGLRT 500



 Score = 76.6 bits (187), Expect(2) = 5e-30
 Identities = 35/75 (46%), Positives = 43/75 (57%)
 Frame = -2

Query: 226 RFTNKKGSKHFALKVDLTKAYDSVKWGSFCNRLCMMGFCCRWIQWVMECSKSTWYSILIN 47
           R  N    K  A+K D++KAYD V+WG        MGF  +WI W+M C  S  Y +L+N
Sbjct: 499 RTNNSCKGKFMAIKTDMSKAYDRVEWGFLGALFRRMGFAEKWISWIMLCVSSVQYQVLVN 558

Query: 46  GSPHGFFKPGRGLRQ 2
           G PHG   P RGLRQ
Sbjct: 559 GQPHGQIIPERGLRQ 573


>ref|XP_013654011.1| PREDICTED: uncharacterized protein LOC106358754 [Brassica napus]
          Length = 916

 Score = 85.9 bits (211), Expect(2) = 7e-30
 Identities = 47/100 (47%), Positives = 67/100 (67%), Gaps = 4/100 (4%)
 Frame = -3

Query: 501 VGVDLTSAINHFFSTGIL*SIF----ITLIPKKDHAAKASDFRPMSLCNVIHKVITKLMA 334
           VG  LT  I  FF TGI+ S +    + LIPKK +A   +D RP+SLC+V++KVI+K++A
Sbjct: 44  VGDQLTKEILSFFETGIMPSEWNYTQLCLIPKKKNATLMTDLRPISLCSVMYKVISKILA 103

Query: 333 NRLSCLLPKLVGHEQSAFIKGKLIQHNIIMSLELIRGLLT 214
           +RL  +LP++V   QSAF+  +LI  NII++ E I  L T
Sbjct: 104 SRLKSILPEIVSPSQSAFVSDRLISDNIILAHESIHSLRT 143



 Score = 71.6 bits (174), Expect(2) = 7e-30
 Identities = 31/67 (46%), Positives = 41/67 (61%)
 Frame = -2

Query: 205 SKHFALKVDLTKAYDSVKWGSFCNRLCMMGFCCRWIQWVMECSKSTWYSILINGSPHGFF 26
           S   A K DL+KA+D V+W      L  +GF  RW+ W+MEC  +  YS+L+NG  +GF 
Sbjct: 149 SNFMAAKTDLSKAFDRVEWNYLKAILLSLGFHPRWVAWIMECVSTVKYSVLLNGQAYGFI 208

Query: 25  KPGRGLR 5
            P RGLR
Sbjct: 209 SPNRGLR 215


>gb|AAD17398.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1225

 Score = 78.6 bits (192), Expect(2) = 1e-29
 Identities = 43/99 (43%), Positives = 62/99 (62%), Gaps = 4/99 (4%)
 Frame = -3

Query: 498 GVDLTSAINHFFSTGI----L*SIFITLIPKKDHAAKASDFRPMSLCNVIHKVITKLMAN 331
           G DL   + +F STG     L    I LIPK +   K ++FRP+SLCNV +KVI+K++++
Sbjct: 411 GPDLIKLVQNFHSTGFFDERLNETNICLIPKTERPRKMAEFRPISLCNVSYKVISKVLSS 470

Query: 330 RLSCLLPKLVGHEQSAFIKGKLIQHNIIMSLELIRGLLT 214
           RL  LLP+L+   QSAF+  +LI  NI+++ E    L T
Sbjct: 471 RLKRLLPELISETQSAFVAERLITDNILIAQENFHALRT 509



 Score = 78.2 bits (191), Expect(2) = 1e-29
 Identities = 32/67 (47%), Positives = 44/67 (65%)
 Frame = -2

Query: 202 KHFALKVDLTKAYDSVKWGSFCNRLCMMGFCCRWIQWVMECSKSTWYSILINGSPHGFFK 23
           K+ A+K D++KAYD V+W      +  MGF  +W+ W++ C  S  Y IL+NGSP GF K
Sbjct: 516 KYMAIKTDMSKAYDRVEWSFLRALMLKMGFAQKWVDWIIFCISSVSYKILLNGSPKGFIK 575

Query: 22  PGRGLRQ 2
           P RG+RQ
Sbjct: 576 PSRGIRQ 582


>ref|XP_012087222.1| PREDICTED: uncharacterized protein LOC105646064 [Jatropha curcas]
          Length = 870

 Score = 87.0 bits (214), Expect(2) = 1e-29
 Identities = 41/89 (46%), Positives = 60/89 (67%), Gaps = 4/89 (4%)
 Frame = -3

Query: 474 NHFFSTGI----L*SIFITLIPKKDHAAKASDFRPMSLCNVIHKVITKLMANRLSCLLPK 307
           NH+   GI    L    + LIPKKD     +DFRP+SLCNV++K+++K++ANR  C+LP 
Sbjct: 138 NHWLQQGIFPNSLNDTLLVLIPKKDRPEFVTDFRPISLCNVLYKIVSKILANRFKCVLPN 197

Query: 306 LVGHEQSAFIKGKLIQHNIIMSLELIRGL 220
           L+   QSAFI G+LI  NI+++ E++  L
Sbjct: 198 LISCYQSAFIPGRLITDNILIAFEMMHNL 226



 Score = 69.7 bits (169), Expect(2) = 1e-29
 Identities = 35/75 (46%), Positives = 45/75 (60%), Gaps = 4/75 (5%)
 Frame = -2

Query: 214 KKGSK----HFALKVDLTKAYDSVKWGSFCNRLCMMGFCCRWIQWVMECSKSTWYSILIN 47
           KK SK    + A+K+D++KAYD V W      L  MGFC  W+ W+  C  S  YSI++N
Sbjct: 227 KKPSKGRCGNCAMKIDISKAYDRVCWEYVWAMLEKMGFCAVWVNWMKMCMTSVKYSIIVN 286

Query: 46  GSPHGFFKPGRGLRQ 2
           G+  G   PGRGLRQ
Sbjct: 287 GNTVGSIVPGRGLRQ 301


>dbj|BAF01759.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 400

 Score = 78.6 bits (192), Expect(2) = 1e-29
 Identities = 43/99 (43%), Positives = 62/99 (62%), Gaps = 4/99 (4%)
 Frame = -3

Query: 498 GVDLTSAINHFFSTGI----L*SIFITLIPKKDHAAKASDFRPMSLCNVIHKVITKLMAN 331
           G DL   + +F STG     L    I LIPK +   K ++FRP+SLCNV +KVI+K++++
Sbjct: 45  GPDLIKLVQNFHSTGFFDERLNETNICLIPKTERPRKMAEFRPISLCNVSYKVISKVLSS 104

Query: 330 RLSCLLPKLVGHEQSAFIKGKLIQHNIIMSLELIRGLLT 214
           RL  LLP+L+   QSAF+  +LI  NI+++ E    L T
Sbjct: 105 RLKRLLPELISETQSAFVAERLITDNILIAQENFHALRT 143



 Score = 78.2 bits (191), Expect(2) = 1e-29
 Identities = 32/67 (47%), Positives = 44/67 (65%)
 Frame = -2

Query: 202 KHFALKVDLTKAYDSVKWGSFCNRLCMMGFCCRWIQWVMECSKSTWYSILINGSPHGFFK 23
           K+ A+K D++KAYD V+W      +  MGF  +W+ W++ C  S  Y IL+NGSP GF K
Sbjct: 150 KYMAIKTDMSKAYDRVEWSFLRALMLKMGFAQKWVDWIIFCISSVSYKILLNGSPKGFIK 209

Query: 22  PGRGLRQ 2
           P RG+RQ
Sbjct: 210 PSRGIRQ 216


>ref|XP_010495217.1| PREDICTED: uncharacterized protein LOC104772285 [Camelina sativa]
          Length = 1122

 Score = 83.6 bits (205), Expect(2) = 1e-29
 Identities = 38/75 (50%), Positives = 46/75 (61%)
 Frame = -2

Query: 226 RFTNKKGSKHFALKVDLTKAYDSVKWGSFCNRLCMMGFCCRWIQWVMECSKSTWYSILIN 47
           R  N   SK  A+K D++KAYD V+W      L  MGF  RWI W+M C  S  Y +L+N
Sbjct: 359 RTNNSCKSKFMAIKTDMSKAYDRVEWSFVEQVLRQMGFSDRWISWIMYCVSSVDYKVLLN 418

Query: 46  GSPHGFFKPGRGLRQ 2
           G PHGF +P RGLRQ
Sbjct: 419 GQPHGFIQPARGLRQ 433



 Score = 72.8 bits (177), Expect(2) = 1e-29
 Identities = 34/77 (44%), Positives = 52/77 (67%)
 Frame = -3

Query: 444 SIFITLIPKKDHAAKASDFRPMSLCNVIHKVITKLMANRLSCLLPKLVGHEQSAFIKGKL 265
           S  I+LIPK     + ++ RP+SLCNV +K+I+K++  RL  +LP L+   QSAF+ G+L
Sbjct: 284 STHISLIPKVPKPTRMAELRPISLCNVGYKIISKILCQRLKRVLPTLISETQSAFVPGRL 343

Query: 264 IQHNIIMSLELIRGLLT 214
           I  NI+++ E+  GL T
Sbjct: 344 ISDNILIAQEMFHGLRT 360


>ref|XP_009103824.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103829890
            [Brassica rapa]
          Length = 1659

 Score = 93.2 bits (230), Expect(2) = 2e-29
 Identities = 42/96 (43%), Positives = 68/96 (70%), Gaps = 4/96 (4%)
 Frame = -3

Query: 501  VGVDLTSAINHFFSTGIL*----SIFITLIPKKDHAAKASDFRPMSLCNVIHKVITKLMA 334
            +G D+ +A+  FF+ G L     S  + LIPKK+ A    D+RP+SLCNV++KVI+K++A
Sbjct: 894  IGADVVNAVQSFFTKGFLPKGLNSTILALIPKKEEARMMKDYRPISLCNVLYKVISKIIA 953

Query: 333  NRLSCLLPKLVGHEQSAFIKGKLIQHNIIMSLELIR 226
            NRL  ++PK +   QSAF+KG+L+  N++++ EL++
Sbjct: 954  NRLKGIMPKCITLNQSAFVKGRLLMENVLLASELVK 989



 Score = 62.8 bits (151), Expect(2) = 2e-29
 Identities = 28/64 (43%), Positives = 42/64 (65%)
 Frame = -2

Query: 193  ALKVDLTKAYDSVKWGSFCNRLCMMGFCCRWIQWVMECSKSTWYSILINGSPHGFFKPGR 14
            A+++D+ KA+DSV+W    N L  MGF  ++IQW+  C  S  +S+ +NG   G+F+  R
Sbjct: 1001 AMQIDIAKAFDSVQWPFLLNTLQAMGFPGKFIQWISLCITSPSFSVQVNGELAGYFQSKR 1060

Query: 13   GLRQ 2
            GLRQ
Sbjct: 1061 GLRQ 1064


>ref|XP_013664998.1| PREDICTED: uncharacterized protein LOC106369383 [Brassica napus]
          Length = 1647

 Score = 93.2 bits (230), Expect(2) = 2e-29
 Identities = 42/96 (43%), Positives = 68/96 (70%), Gaps = 4/96 (4%)
 Frame = -3

Query: 501  VGVDLTSAINHFFSTGIL*----SIFITLIPKKDHAAKASDFRPMSLCNVIHKVITKLMA 334
            +G D+ +A+  FF+ G L     S  + LIPKK+ A    D+RP+SLCNV++KVI+K++A
Sbjct: 914  IGADVVNAVQSFFTKGFLPKGLNSTILALIPKKEEARMMKDYRPISLCNVLYKVISKIIA 973

Query: 333  NRLSCLLPKLVGHEQSAFIKGKLIQHNIIMSLELIR 226
            NRL  ++PK +   QSAF+KG+L+  N++++ EL++
Sbjct: 974  NRLKGIMPKCITLNQSAFVKGRLLMENVLLASELVK 1009



 Score = 62.8 bits (151), Expect(2) = 2e-29
 Identities = 28/64 (43%), Positives = 42/64 (65%)
 Frame = -2

Query: 193  ALKVDLTKAYDSVKWGSFCNRLCMMGFCCRWIQWVMECSKSTWYSILINGSPHGFFKPGR 14
            A+++D+ KA+DSV+W    N L  MGF  ++IQW+  C  S  +S+ +NG   G+F+  R
Sbjct: 1021 AMQIDIAKAFDSVQWPFLLNTLQAMGFPGKFIQWISLCITSPSFSVQVNGELAGYFQSKR 1080

Query: 13   GLRQ 2
            GLRQ
Sbjct: 1081 GLRQ 1084


>ref|XP_013730329.1| PREDICTED: uncharacterized protein LOC106434036 [Brassica napus]
          Length = 1914

 Score = 88.6 bits (218), Expect(2) = 2e-29
 Identities = 45/100 (45%), Positives = 64/100 (64%), Gaps = 4/100 (4%)
 Frame = -3

Query: 501  VGVDLTSAINHFFSTGI----L*SIFITLIPKKDHAAKASDFRPMSLCNVIHKVITKLMA 334
            VG D+ + I  FFS+G+    L    + LIPK   A    D+RP++LCNV +K+I+KL+A
Sbjct: 1032 VGPDIVAEIQEFFSSGVMPRSLNHTLVRLIPKNTEAKSVGDYRPIALCNVYYKIISKLLA 1091

Query: 333  NRLSCLLPKLVGHEQSAFIKGKLIQHNIIMSLELIRGLLT 214
            NR   LLP LV   QSAF++G+ I  NI++S E++  L T
Sbjct: 1092 NRFKTLLPDLVSENQSAFVQGRAITDNILISHEVLHFLKT 1131



 Score = 67.0 bits (162), Expect(2) = 2e-29
 Identities = 29/64 (45%), Positives = 42/64 (65%)
 Frame = -2

Query: 193  ALKVDLTKAYDSVKWGSFCNRLCMMGFCCRWIQWVMECSKSTWYSILINGSPHGFFKPGR 14
            A+K D++KAYD ++W      +  +GF   WI+W+M+C K+  YS LIN S  G+ KP R
Sbjct: 1141 AVKTDMSKAYDRLEWDFIEEVMIHLGFHVIWIEWIMQCVKTVSYSFLINESEQGWVKPER 1200

Query: 13   GLRQ 2
            G+RQ
Sbjct: 1201 GIRQ 1204


>ref|XP_009149314.1| PREDICTED: uncharacterized protein LOC103872634 [Brassica rapa]
          Length = 954

 Score = 79.0 bits (193), Expect(2) = 2e-29
 Identities = 37/100 (37%), Positives = 67/100 (67%), Gaps = 4/100 (4%)
 Frame = -3

Query: 501 VGVDLTSAINHFFSTGIL*SIF----ITLIPKKDHAAKASDFRPMSLCNVIHKVITKLMA 334
           VG  L++ I  FF++ ++ S +    ++L+PK  +  +  D RP+SLC+V +K+I+K++ 
Sbjct: 94  VGPQLSAEILGFFNSSVIPSGWNHTQLSLLPKIPNPTQMGDMRPISLCSVQYKIISKILC 153

Query: 333 NRLSCLLPKLVGHEQSAFIKGKLIQHNIIMSLELIRGLLT 214
           +RL C+LP ++   Q AF++G+LI  NI+++ E + GL T
Sbjct: 154 DRLKCILPDIISDTQGAFVQGRLISDNIVIAHEFVHGLRT 193



 Score = 76.6 bits (187), Expect(2) = 2e-29
 Identities = 38/74 (51%), Positives = 47/74 (63%), Gaps = 1/74 (1%)
 Frame = -2

Query: 220 TNKKGSKHF-ALKVDLTKAYDSVKWGSFCNRLCMMGFCCRWIQWVMECSKSTWYSILING 44
           TN   SK F A+K D++KAYD V+W      L  MGF   W++WVM C  S  YS+L+NG
Sbjct: 193 TNASVSKEFMAIKTDMSKAYDRVEWCFMEELLEKMGFDRVWVRWVMACITSVSYSVLLNG 252

Query: 43  SPHGFFKPGRGLRQ 2
             HGF KP RG+RQ
Sbjct: 253 RSHGFIKPERGIRQ 266