BLASTX nr result

ID: Cornus23_contig00017576 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00017576
         (387 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CDP57007.1| Cytochrome b6-f complex subunit, cytochrome b6 [...    54   6e-08
ref|XP_008467004.1| PREDICTED: LOW QUALITY PROTEIN: cytochrome b...    47   4e-06

>emb|CDP57007.1| Cytochrome b6-f complex subunit, cytochrome b6 [Staphylococcus
           aureus subsp. aureus]
          Length = 267

 Score = 53.5 bits (127), Expect(2) = 6e-08
 Identities = 24/33 (72%), Positives = 27/33 (81%)
 Frame = -2

Query: 137 FQTFYYICVATSIWVFLLELYEVKFSYTVLRGG 39
           FQTFY I V+ + WVFL ELYE+KFSYTVL GG
Sbjct: 14  FQTFYSISVSANTWVFLFELYEMKFSYTVLGGG 46



 Score = 30.0 bits (66), Expect(2) = 6e-08
 Identities = 11/11 (100%), Positives = 11/11 (100%)
 Frame = -1

Query: 33 TYLNKVYDWFE 1
          TYLNKVYDWFE
Sbjct: 51 TYLNKVYDWFE 61


>ref|XP_008467004.1| PREDICTED: LOW QUALITY PROTEIN: cytochrome b6, partial [Cucumis
           melo]
          Length = 260

 Score = 47.0 bits (110), Expect(2) = 4e-06
 Identities = 21/30 (70%), Positives = 23/30 (76%)
 Frame = -2

Query: 122 YICVATSIWVFLLELYEVKFSYTVLRGGIP 33
           +I V + IWVFL E YE KFSYTVLRGG P
Sbjct: 12  HISVTSGIWVFLFEPYETKFSYTVLRGGSP 41



 Score = 30.4 bits (67), Expect(2) = 4e-06
 Identities = 13/16 (81%), Positives = 14/16 (87%), Gaps = 2/16 (12%)
 Frame = -1

Query: 42 GNP--TYLNKVYDWFE 1
          G+P  TYLNKVYDWFE
Sbjct: 39 GSPWFTYLNKVYDWFE 54


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