BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00017555
         (332 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAK70407.1|AF369930_2 pol polyprotein [Citrus x paradisi]          113   6e-23
emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera]   108   1e-21
emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera]   108   1e-21
emb|CAN74721.1| hypothetical protein VITISV_006958 [Vitis vinifera]   103   5e-20
emb|CAN82637.1| hypothetical protein VITISV_028818 [Vitis vinifera]   102   1e-19
gb|ABI34306.1| Polyprotein, putative [Solanum demissum]               102   1e-19
emb|CAN66576.1| hypothetical protein VITISV_016964 [Vitis vinifera]   101   2e-19
emb|CAX68207.1| Copia-like retrotransposon [Helianthus annuus]        101   3e-19
gb|AAL75486.1|AF466202_12 putative Fourf gag/pol protein [Zea mays]   100   3e-19
emb|CAN69855.1| hypothetical protein VITISV_041230 [Vitis vinifera]   100   3e-19
gb|AAK73108.1|AF391808_10 Fourf gag/pol protein [Zea mays] gi|16...   100   3e-19
emb|CAN78666.1| hypothetical protein VITISV_032507 [Vitis vinifera]   100   4e-19
emb|CAN66873.1| hypothetical protein VITISV_021427 [Vitis vinifera]   100   4e-19
gb|ABW81017.1| gag-pol polymerase [Arabidopsis lyrata subsp. lyr...    99   1e-18
emb|CAN78262.1| hypothetical protein VITISV_006704 [Vitis vinifera]    99   1e-18
emb|CAN63736.1| hypothetical protein VITISV_037249 [Vitis vinifera]    99   2e-18
emb|CAN68340.1| hypothetical protein VITISV_025981 [Vitis vinifera]    99   2e-18
gb|AAM22635.1|AF434192_2 Gag and Pol [Zea mays]                        99   2e-18
gb|AAP94586.1| putative retrotransposon RIRE1 poly protein [Zea ...    97   6e-18
emb|CAN66710.1| hypothetical protein VITISV_006397 [Vitis vinifera]    96   8e-18

>gb|AAK70407.1|AF369930_2 pol polyprotein [Citrus x paradisi]
          Length = 701

 Score =  113 bits (282), Expect = 6e-23
 Identities = 52/110 (47%), Positives = 75/110 (68%)
 Frame = +3

Query: 3   NFGSIKTMANQGLIPNSNVEHQDKCVACCKCKITRSSFPNVQRSTKVLEFIHTDICEMTN 182
           NF S++ + N   IPN  ++ + KC  C + K+TRSSF  +QR+++ L+ IH+DIC+  +
Sbjct: 470 NFNSLRKLINMKHIPNFQIDLKHKCKTCVEAKLTRSSFQIIQRNSEPLDLIHSDICDFKS 529

Query: 183 IQSRDRKQYFLTFIDDASRYTYVYLLR*KSDTFDKFKAYKAEVENFHNSK 332
           IQ+R   +YF+TFIDD ++Y YVYLL+ K +  DKF  YK EVEN  N K
Sbjct: 530 IQTRGGNKYFITFIDDCTKYCYVYLLKSKDEALDKFILYKNEVENQLNRK 579


>emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera]
          Length = 1277

 Score =  108 bits (271), Expect = 1e-21
 Identities = 47/110 (42%), Positives = 74/110 (67%)
 Frame = +3

Query: 3   NFGSIKTMANQGLIPNSNVEHQDKCVACCKCKITRSSFPNVQRSTKVLEFIHTDICEMTN 182
           N+ +++ + N   IP   +    KC  C + K+TRSSF +V+R+T+ L+ IH+DIC++  
Sbjct: 481 NYDTLRRLINLNHIPTFQINSNHKCETCVEAKLTRSSFQSVERNTEPLDLIHSDICDLKF 540

Query: 183 IQSRDRKQYFLTFIDDASRYTYVYLLR*KSDTFDKFKAYKAEVENFHNSK 332
           +Q+R   +YF+TF+DD+++Y YVYLL+ K +  +KF  YK EVEN  N K
Sbjct: 541 VQTRGGNKYFITFVDDSTKYCYVYLLKSKDEAIEKFVLYKTEVENQLNKK 590


>emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera]
          Length = 1316

 Score =  108 bits (271), Expect = 1e-21
 Identities = 47/110 (42%), Positives = 74/110 (67%)
 Frame = +3

Query: 3   NFGSIKTMANQGLIPNSNVEHQDKCVACCKCKITRSSFPNVQRSTKVLEFIHTDICEMTN 182
           N+ +++ + N   IP   +    KC  C + K+TRSSF +V+R+T+ L+ IH+DIC++  
Sbjct: 481 NYDTLRRLINLNHIPTFQINSNHKCETCVEAKLTRSSFQSVERNTEPLDLIHSDICDLKF 540

Query: 183 IQSRDRKQYFLTFIDDASRYTYVYLLR*KSDTFDKFKAYKAEVENFHNSK 332
           +Q+R   +YF+TF+DD+++Y YVYLL+ K +  +KF  YK EVEN  N K
Sbjct: 541 VQTRGGNKYFITFVDDSTKYCYVYLLKSKDEAIEKFVLYKTEVENQLNKK 590


>emb|CAN74721.1| hypothetical protein VITISV_006958 [Vitis vinifera]
          Length = 487

 Score =  103 bits (257), Expect = 5e-20
 Identities = 47/109 (43%), Positives = 70/109 (64%)
 Frame = +3

Query: 3   NFGSIKTMANQGLIPNSNVEHQDKCVACCKCKITRSSFPNVQRSTKVLEFIHTDICEMTN 182
           N+ S+  MAN GL+   ++    KC  C + K  R  F +++RS+++LE +H+D+C++  
Sbjct: 206 NYHSMYKMANLGLLLKFDINETQKCEICVESKFARKPFKSIERSSELLELVHSDLCDLKM 265

Query: 183 IQSRDRKQYFLTFIDDASRYTYVYLLR*KSDTFDKFKAYKAEVENFHNS 329
             +R   +YF+TFIDD SR+ YVYLL  K +T D FK YK EVEN  N+
Sbjct: 266 TPTRGGIKYFITFIDDYSRFCYVYLLHSKDETIDVFKTYKNEVENHENN 314


>emb|CAN82637.1| hypothetical protein VITISV_028818 [Vitis vinifera]
          Length = 1114

 Score =  102 bits (254), Expect = 1e-19
 Identities = 49/102 (48%), Positives = 72/102 (70%)
 Frame = +3

Query: 12  SIKTMANQGLIPNSNVEHQDKCVACCKCKITRSSFPNVQRSTKVLEFIHTDICEMTNIQS 191
           +IK +   GLI   + +  +KC  C K K+ +  F +V+RS+ +L+ IH+D+CE+  + +
Sbjct: 344 TIKRIVKCGLIA-CDTKKFEKCEICVKSKMIKKPFHSVERSSNLLDLIHSDLCELNGMLT 402

Query: 192 RDRKQYFLTFIDDASRYTYVYLLR*KSDTFDKFKAYKAEVEN 317
           R   +YFLTFIDD SR+TYV+LL+ KS+TF+ FK YKAEVEN
Sbjct: 403 RGGNRYFLTFIDDCSRFTYVFLLKNKSETFNAFKVYKAEVEN 444


>gb|ABI34306.1| Polyprotein, putative [Solanum demissum]
          Length = 1691

 Score =  102 bits (253), Expect = 1e-19
 Identities = 50/98 (51%), Positives = 68/98 (69%)
 Frame = +3

Query: 24  MANQGLIPNSNVEHQDKCVACCKCKITRSSFPNVQRSTKVLEFIHTDICEMTNIQSRDRK 203
           M++ GLIP    ++ +KC AC K KIT+     V+R T +LE +HTDICE+  I +R   
Sbjct: 456 MSSLGLIPMIK-KNFEKCEACSKAKITKRPHFQVERKTDLLELVHTDICELGGILTRGGN 514

Query: 204 QYFLTFIDDASRYTYVYLLR*KSDTFDKFKAYKAEVEN 317
           +YF+TFIDD S++TYVYL++ KSD F+ FK Y  EVEN
Sbjct: 515 RYFITFIDDFSKFTYVYLMKNKSDAFENFKTYLHEVEN 552


>emb|CAN66576.1| hypothetical protein VITISV_016964 [Vitis vinifera]
          Length = 1316

 Score =  101 bits (252), Expect = 2e-19
 Identities = 44/105 (41%), Positives = 70/105 (66%)
 Frame = +3

Query: 3   NFGSIKTMANQGLIPNSNVEHQDKCVACCKCKITRSSFPNVQRSTKVLEFIHTDICEMTN 182
           N+ ++  + +   +P  N++   KC  C + K+T+  F +V+RST+ L+  H+DIC++  
Sbjct: 610 NYDTLCRLIHLDYLPKFNIDPNHKCETCVESKLTKVPFHSVERSTEPLDLFHSDICDLKF 669

Query: 183 IQSRDRKQYFLTFIDDASRYTYVYLLR*KSDTFDKFKAYKAEVEN 317
           +Q+R  K+YF+TFIDD +RY YVYLL+ K +  + FK YK EVEN
Sbjct: 670 VQTRGGKKYFITFIDDCTRYCYVYLLKSKDEAIEMFKHYKIEVEN 714


>emb|CAX68207.1| Copia-like retrotransposon [Helianthus annuus]
          Length = 1358

 Score =  101 bits (251), Expect = 3e-19
 Identities = 50/105 (47%), Positives = 71/105 (67%), Gaps = 1/105 (0%)
 Frame = +3

Query: 3   NFGSIKTMANQGLIPNSNVEHQDKCVACCKCKITRSSFPNV-QRSTKVLEFIHTDICEMT 179
           N  +I+ M  +GL+   N +  +KC  C K K T+  FP+V +R+T +LE IH+DICE+ 
Sbjct: 503 NIKNIEKMQTKGLL-KLNDKDFEKCETCVKSKFTKKPFPSVPKRNTSLLELIHSDICELN 561

Query: 180 NIQSRDRKQYFLTFIDDASRYTYVYLLR*KSDTFDKFKAYKAEVE 314
            + +R  K+YF++F DD+SRY YVYLL  K + F+ FK YKAEVE
Sbjct: 562 GVLTRGGKRYFISFCDDSSRYLYVYLLHSKDEAFEAFKIYKAEVE 606


>gb|AAL75486.1|AF466202_12 putative Fourf gag/pol protein [Zea mays]
          Length = 1292

 Score =  100 bits (250), Expect = 3e-19
 Identities = 50/106 (47%), Positives = 69/106 (65%), Gaps = 1/106 (0%)
 Frame = +3

Query: 3   NFGSIKTMANQGLIPNSNVEHQDKCVACCKCKITRSSFPNVQ-RSTKVLEFIHTDICEMT 179
           +FG +  +AN  LIP  N+  + KC  C + K  R      + RS   LE +H+D+CEM 
Sbjct: 456 SFGCLMRLANINLIPKFNLVKKSKCHVCVESKQPRKPHKAAEARSLAPLELVHSDLCEMN 515

Query: 180 NIQSRDRKQYFLTFIDDASRYTYVYLLR*KSDTFDKFKAYKAEVEN 317
            I ++  K+YFLTFIDD++R+ YVYLL+ K + F+ FKAYKAEVEN
Sbjct: 516 GILTKGGKRYFLTFIDDSTRFCYVYLLKTKDEAFNYFKAYKAEVEN 561


>emb|CAN69855.1| hypothetical protein VITISV_041230 [Vitis vinifera]
          Length = 1236

 Score =  100 bits (250), Expect = 3e-19
 Identities = 48/102 (47%), Positives = 72/102 (70%)
 Frame = +3

Query: 12  SIKTMANQGLIPNSNVEHQDKCVACCKCKITRSSFPNVQRSTKVLEFIHTDICEMTNIQS 191
           +IK +   GLI   + +  +KC  C K K+ +  F +V+RS+ +L+ IH+D+CE+  + +
Sbjct: 406 TIKRIVKCGLIA-CDTKKFEKCEICVKSKMIKMPFHSVERSSNLLDLIHSDLCELNGMLT 464

Query: 192 RDRKQYFLTFIDDASRYTYVYLLR*KSDTFDKFKAYKAEVEN 317
           +   +YFLTFIDD SR+TYV+LL+ KS+TF+ FK YKAEVEN
Sbjct: 465 KGGNRYFLTFIDDCSRFTYVFLLKNKSETFNAFKVYKAEVEN 506


>gb|AAK73108.1|AF391808_10 Fourf gag/pol protein [Zea mays] gi|168251067|gb|ACA21850.1| Fourf
           gag/pol protein [Zea mays]
          Length = 1279

 Score =  100 bits (250), Expect = 3e-19
 Identities = 50/106 (47%), Positives = 69/106 (65%), Gaps = 1/106 (0%)
 Frame = +3

Query: 3   NFGSIKTMANQGLIPNSNVEHQDKCVACCKCKITRSSFPNVQ-RSTKVLEFIHTDICEMT 179
           +FG +  +AN  LIP  N+  + KC  C + K  R      + RS   LE +H+D+CEM 
Sbjct: 416 SFGCLMRLANINLIPKFNLVKKSKCHVCVESKQPRKPHKAAEARSLAPLELVHSDLCEMN 475

Query: 180 NIQSRDRKQYFLTFIDDASRYTYVYLLR*KSDTFDKFKAYKAEVEN 317
            I ++  K+YFLTFIDD++R+ YVYLL+ K + F+ FKAYKAEVEN
Sbjct: 476 GILTKGGKRYFLTFIDDSTRFCYVYLLKTKDEAFNYFKAYKAEVEN 521


>emb|CAN78666.1| hypothetical protein VITISV_032507 [Vitis vinifera]
          Length = 804

 Score =  100 bits (249), Expect = 4e-19
 Identities = 48/102 (47%), Positives = 71/102 (69%)
 Frame = +3

Query: 12  SIKTMANQGLIPNSNVEHQDKCVACCKCKITRSSFPNVQRSTKVLEFIHTDICEMTNIQS 191
           +IK +   GLI   + +  +KC  C K K+ +  F +V+RS+ +L+  H+D+CE+  + +
Sbjct: 454 TIKRIVKCGLIA-CDTKKFEKCEICVKSKMIKKPFHSVERSSNLLDLXHSDLCELNGMLT 512

Query: 192 RDRKQYFLTFIDDASRYTYVYLLR*KSDTFDKFKAYKAEVEN 317
           R   +YFLTFIDD SR+TYV+LL+ KS+TF+ FK YKAEVEN
Sbjct: 513 RGGNRYFLTFIDDCSRFTYVFLLKNKSETFNAFKVYKAEVEN 554


>emb|CAN66873.1| hypothetical protein VITISV_021427 [Vitis vinifera]
          Length = 1473

 Score =  100 bits (249), Expect = 4e-19
 Identities = 48/102 (47%), Positives = 71/102 (69%)
 Frame = +3

Query: 12  SIKTMANQGLIPNSNVEHQDKCVACCKCKITRSSFPNVQRSTKVLEFIHTDICEMTNIQS 191
           +IK +   GLI   + +  +KC  C K K+ +  F +V+RS+ +L+  H+D+CE+  + +
Sbjct: 454 TIKRIVKCGLIA-CDTKKFEKCEICVKSKMIKKPFHSVERSSNLLDLXHSDLCELNGMLT 512

Query: 192 RDRKQYFLTFIDDASRYTYVYLLR*KSDTFDKFKAYKAEVEN 317
           R   +YFLTFIDD SR+TYV+LL+ KS+TF+ FK YKAEVEN
Sbjct: 513 RGGNRYFLTFIDDCSRFTYVFLLKNKSETFNAFKVYKAEVEN 554


>gb|ABW81017.1| gag-pol polymerase [Arabidopsis lyrata subsp. lyrata]
          Length = 1034

 Score = 99.4 bits (246), Expect = 1e-18
 Identities = 48/101 (47%), Positives = 68/101 (67%)
 Frame = +3

Query: 24  MANQGLIPNSNVEHQDKCVACCKCKITRSSFPNVQRSTKVLEFIHTDICEMTNIQSRDRK 203
           M+ +GLIP  +V + +KC  C   KI R  F +++R++KVLE IH+D+C++    S   K
Sbjct: 415 MSKEGLIPTFDV-NIEKCRTCMLTKIIRQPFKSIERNSKVLELIHSDLCDIHATSSLGNK 473

Query: 204 QYFLTFIDDASRYTYVYLLR*KSDTFDKFKAYKAEVENFHN 326
           +YF+TFIDD SR+ YVYLL  K +  +KFK YK EVE  H+
Sbjct: 474 KYFITFIDDYSRFCYVYLLHAKDEALEKFKVYKTEVELQHS 514


>emb|CAN78262.1| hypothetical protein VITISV_006704 [Vitis vinifera]
          Length = 565

 Score = 99.4 bits (246), Expect = 1e-18
 Identities = 49/110 (44%), Positives = 69/110 (62%)
 Frame = +3

Query: 3   NFGSIKTMANQGLIPNSNVEHQDKCVACCKCKITRSSFPNVQRSTKVLEFIHTDICEMTN 182
           NF  +K M    LIP  ++E+  KC +C + K T+ S  +V+R   +L  IH+D+ ++ N
Sbjct: 336 NFSYMKKMVELSLIPKLSLENHGKCESCVESKTTKKSCKSVERELDLLSLIHSDLGDLKN 395

Query: 183 IQSRDRKQYFLTFIDDASRYTYVYLLR*KSDTFDKFKAYKAEVENFHNSK 332
             +RD K++++TFIDD SRYT VYLLR K +  D F  YK EVEN  N K
Sbjct: 396 TMTRDGKRFYITFIDDYSRYTRVYLLRNKDEARDAFIKYKNEVENQLNKK 445


>emb|CAN63736.1| hypothetical protein VITISV_037249 [Vitis vinifera]
          Length = 839

 Score = 98.6 bits (244), Expect = 2e-18
 Identities = 45/105 (42%), Positives = 67/105 (63%)
 Frame = +3

Query: 3   NFGSIKTMANQGLIPNSNVEHQDKCVACCKCKITRSSFPNVQRSTKVLEFIHTDICEMTN 182
           N  ++K + N  L+   +++ + KC  C + K+ +  F +++R+TK  + IH DIC++  
Sbjct: 278 NNKTLKMLINMNLLHFFSIDFKHKCEVCVEAKMAKPPFHSIERNTKPPDLIHNDICDLKF 337

Query: 183 IQSRDRKQYFLTFIDDASRYTYVYLLR*KSDTFDKFKAYKAEVEN 317
           +Q+R  K YF+TFIDD  RY YVYLLR K +  D FK YK EVEN
Sbjct: 338 VQTRGGKMYFITFIDDCIRYCYVYLLRSKDEALDVFKHYKNEVEN 382


>emb|CAN68340.1| hypothetical protein VITISV_025981 [Vitis vinifera]
          Length = 791

 Score = 98.6 bits (244), Expect = 2e-18
 Identities = 47/101 (46%), Positives = 70/101 (69%)
 Frame = +3

Query: 15  IKTMANQGLIPNSNVEHQDKCVACCKCKITRSSFPNVQRSTKVLEFIHTDICEMTNIQSR 194
           IK +   GLI   + +  +KC  C K K+ +  F +V+RS+ +L+ IH+D+CE+  + +R
Sbjct: 433 IKRIVKCGLIA-CDTKKFEKCEICVKSKMIKKPFHSVERSSNLLDLIHSDLCELNGMLTR 491

Query: 195 DRKQYFLTFIDDASRYTYVYLLR*KSDTFDKFKAYKAEVEN 317
              +YFLTFIDD SR+TYV+LL+ KS+TF+ FK Y A+VEN
Sbjct: 492 GGNRYFLTFIDDCSRFTYVFLLKNKSETFNAFKVYNAKVEN 532


>gb|AAM22635.1|AF434192_2 Gag and Pol [Zea mays]
          Length = 1264

 Score = 98.6 bits (244), Expect = 2e-18
 Identities = 49/106 (46%), Positives = 65/106 (61%), Gaps = 1/106 (0%)
 Frame = +3

Query: 3   NFGSIKTMANQGLIPNSNVEHQDKCVACCKCKITRSSFPNVQ-RSTKVLEFIHTDICEMT 179
           NFGS+  +A   LIPN  +    KC +C + K  R      + R    LE IH+D+CEM 
Sbjct: 404 NFGSMSRLATMSLIPNITIVKGSKCHSCVQSKQPRKPHKAAEERHLAPLELIHSDLCEMN 463

Query: 180 NIQSRDRKQYFLTFIDDASRYTYVYLLR*KSDTFDKFKAYKAEVEN 317
            + ++  K+YF+T IDDASR+ YVYLL+ K +  D FK YKAEVEN
Sbjct: 464 GVLTKGGKRYFMTLIDDASRFCYVYLLKTKDEALDYFKIYKAEVEN 509


>gb|AAP94586.1| putative retrotransposon RIRE1 poly protein [Zea mays]
          Length = 1309

 Score = 96.7 bits (239), Expect = 6e-18
 Identities = 51/106 (48%), Positives = 65/106 (61%), Gaps = 1/106 (0%)
 Frame = +3

Query: 3   NFGSIKTMANQGLIPNSNVEHQDKCVACCKCKITRSSFPNVQ-RSTKVLEFIHTDICEMT 179
           NF +IK +++  LIP        KC  C + K  R  F  V+ RST  LE IH+DICEM 
Sbjct: 459 NFEAIKRLSDMSLIPEYKHVKGVKCGICVQAKQPRKPFHTVEGRSTTPLELIHSDICEMN 518

Query: 180 NIQSRDRKQYFLTFIDDASRYTYVYLLR*KSDTFDKFKAYKAEVEN 317
            I  +  K+YFLT IDDA+R+ Y+YLLR K +  + FK YK EVEN
Sbjct: 519 GIIIKGGKRYFLTLIDDATRFCYIYLLRTKDEALEHFKIYKTEVEN 564


>emb|CAN66710.1| hypothetical protein VITISV_006397 [Vitis vinifera]
          Length = 1105

 Score = 96.3 bits (238), Expect = 8e-18
 Identities = 45/102 (44%), Positives = 69/102 (67%)
 Frame = +3

Query: 12  SIKTMANQGLIPNSNVEHQDKCVACCKCKITRSSFPNVQRSTKVLEFIHTDICEMTNIQS 191
           +IK +   GLI   + +  +KC  C K K+ +  F +V+RS+ +L+  H+D+CE+  + +
Sbjct: 247 TIKRIVKCGLIA-CDTKKFEKCEICVKSKMIKKXFHSVERSSNLLDLXHSDLCELNXMLT 305

Query: 192 RDRKQYFLTFIDDASRYTYVYLLR*KSDTFDKFKAYKAEVEN 317
           R    YF+TFID+ SR+TYV+LL+ KS+TF+ FK YK EVEN
Sbjct: 306 RGGNXYFJTFIDBXSRFTYVFLLKNKSETFNAFKVYKTEVEN 347