BLASTX nr result
ID: Cornus23_contig00017474
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cornus23_contig00017474
(616 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|WP_027366137.1| protein disaggregation chaperone [Desulfotom... 97 7e-18
ref|WP_027354673.1| protein disaggregation chaperone [Desulfosar... 97 9e-18
gb|KPK81783.1| Clp protease ClpB [Gemmatimonas sp. SM23_52] 96 1e-17
ref|WP_048089013.1| protein disaggregation chaperone [Candidatus... 96 1e-17
ref|WP_012176110.1| chaperone protein ClpB [Desulfococcus oleovo... 96 2e-17
ref|WP_028314516.1| protein disaggregation chaperone [Desulfatib... 95 3e-17
ref|WP_015948179.1| chaperone protein ClpB [Desulfatibacillum al... 95 3e-17
gb|KPQ41809.1| ATP-dependent Clp protease ATP-binding subunit Cl... 95 3e-17
ref|WP_012119465.1| chaperone protein ClpB [Roseiflexus castenho... 95 3e-17
ref|WP_010880827.1| ATP-dependent Clp protease ATP-binding subun... 94 6e-17
ref|WP_036732521.1| protein disaggregation chaperone [Peptococca... 94 6e-17
ref|WP_036748672.1| protein disaggregation chaperone [Peptococca... 94 6e-17
ref|WP_037378312.1| MULTISPECIES: protein disaggregation chapero... 94 8e-17
ref|WP_054034019.1| Clp protease ClpB [Desulfatitalea tepidiphila] 93 1e-16
ref|WP_013706468.1| chaperone protein ClpB [Desulfobacca acetoxi... 93 1e-16
emb|CBX28867.1| Chaperone protein clpB [uncultured Desulfobacter... 93 1e-16
gb|KRT63628.1| ATP-dependent chaperone ClpB [bacterium CSP1-2] 92 2e-16
gb|KPJ77639.1| Clp protease ClpB [Deltaproteobacteria bacterium ... 92 2e-16
ref|WP_028842056.1| protein disaggregation chaperone [Thermodesu... 92 2e-16
ref|WP_012546043.1| chaperone protein ClpB [Thermodesulfovibrio ... 92 2e-16
>ref|WP_027366137.1| protein disaggregation chaperone [Desulfotomaculum alcoholivorax]
Length = 864
Score = 97.1 bits (240), Expect = 7e-18
Identities = 52/71 (73%), Positives = 57/71 (80%), Gaps = 1/71 (1%)
Frame = -3
Query: 548 RKSSCEYMERDAVSRLIGASPGLVGPKQG-QLTEAVL*RPYSVILFDEIEKAHPDVLNIL 372
R EYME+ AVSRLIGA PG VG ++G QLTEAV +PYSVIL DEIEKAHPDV NIL
Sbjct: 635 RLDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRKPYSVILLDEIEKAHPDVFNIL 694
Query: 371 LQLLGDGRVTD 339
LQLL DGR+TD
Sbjct: 695 LQLLDDGRLTD 705
Score = 89.7 bits (221), Expect = 1e-15
Identities = 61/169 (36%), Positives = 86/169 (50%), Gaps = 2/169 (1%)
Frame = -1
Query: 616 FMGPTGVGKTELANALADYLFNTEKAL--VSTWKGMQFPAXXXXXXXXXXXXXXXXLKQF 443
F+GPTGVGKTELA ALA LF+ E+ + + + M+ A Q
Sbjct: 607 FLGPTGVGKTELARALAQSLFDNERNITRLDMSEYMEKHAVSRLIGAPPGYVGYEEGGQL 666
Query: 442 FEDRILLFYLTRLRKHILMCSISCYSFWAMVG*LIQDGRVTDTSGRTVNFKNCMVIMTSN 263
E Y L I ++ L+ DGR+TD GRTVNF+N +VIMTSN
Sbjct: 667 TEAVRRKPYSVILLDEIEKAHPDVFNILLQ---LLDDGRLTDGHGRTVNFQNTVVIMTSN 723
Query: 262 IGSQDILRIFQNKDSKESKYDTMKRQIVELARETCSPEFMNHVDEFIFF 116
+GSQ+IL+ + + +D MK ++ + R+ PEF+N VDE + F
Sbjct: 724 LGSQEILK----QQEQGGDFDQMKASVLGILRKHFRPEFLNRVDEIVVF 768
>ref|WP_027354673.1| protein disaggregation chaperone [Desulfosarcina sp. BuS5]
Length = 865
Score = 96.7 bits (239), Expect = 9e-18
Identities = 51/66 (77%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Frame = -3
Query: 533 EYMERDAVSRLIGASPGLVG-PKQGQLTEAVL*RPYSVILFDEIEKAHPDVLNILLQLLG 357
EYME+ +VSRLIGA PG VG K G LTEAV RPYSVILFDEIEKAHPDV NILLQ+L
Sbjct: 639 EYMEKHSVSRLIGAPPGYVGYEKGGYLTEAVRRRPYSVILFDEIEKAHPDVFNILLQILD 698
Query: 356 DGRVTD 339
DGR+TD
Sbjct: 699 DGRMTD 704
Score = 82.0 bits (201), Expect = 2e-13
Identities = 56/169 (33%), Positives = 83/169 (49%), Gaps = 2/169 (1%)
Frame = -1
Query: 616 FMGPTGVGKTELANALADYLFNTEKALVSTWKGMQFPAXXXXXXXXXXXXXXXXLKQFFE 437
F+GPTGVGKTELA ALA+++F++E+A+V K +
Sbjct: 606 FLGPTGVGKTELAKALAEFIFDSERAMVRIDMSEYMEKHSVSRLIGAPPGYVGYEKGGYL 665
Query: 436 DRILLF--YLTRLRKHILMCSISCYSFWAMVG*LIQDGRVTDTSGRTVNFKNCMVIMTSN 263
+ Y L I ++ + + DGR+TD RTV+FKN ++IMTSN
Sbjct: 666 TEAVRRRPYSVILFDEIEKAHPDVFNILLQI---LDDGRMTDGHARTVDFKNTLIIMTSN 722
Query: 262 IGSQDILRIFQNKDSKESKYDTMKRQIVELARETCSPEFMNHVDEFIFF 116
IGS+ I ++ K + M+++I E R PEF+N +DE I F
Sbjct: 723 IGSRWI------QELTGQKREEMEQKITEALRANFKPEFLNRIDETIIF 765
>gb|KPK81783.1| Clp protease ClpB [Gemmatimonas sp. SM23_52]
Length = 872
Score = 96.3 bits (238), Expect = 1e-17
Identities = 51/71 (71%), Positives = 57/71 (80%), Gaps = 1/71 (1%)
Frame = -3
Query: 548 RKSSCEYMERDAVSRLIGASPGLVGPKQG-QLTEAVL*RPYSVILFDEIEKAHPDVLNIL 372
R EYMER +V+RLIGA PG VG ++G QLTE V RPYSVILFDEIEKAHPDV NIL
Sbjct: 635 RLDMSEYMERHSVARLIGAPPGYVGYEEGGQLTERVRRRPYSVILFDEIEKAHPDVFNIL 694
Query: 371 LQLLGDGRVTD 339
LQ+L DGR+TD
Sbjct: 695 LQVLDDGRLTD 705
Score = 85.5 bits (210), Expect = 2e-14
Identities = 65/179 (36%), Positives = 90/179 (50%), Gaps = 2/179 (1%)
Frame = -1
Query: 616 FMGPTGVGKTELANALADYLFNTEKALV--STWKGMQFPAXXXXXXXXXXXXXXXXLKQF 443
F+GP+GVGKTE A ALA++LF+ E ALV + M+ + Q
Sbjct: 607 FLGPSGVGKTETARALAEFLFDDEAALVRLDMSEYMERHSVARLIGAPPGYVGYEEGGQL 666
Query: 442 FEDRILLFYLTRLRKHILMCSISCYSFWAMVG*LIQDGRVTDTSGRTVNFKNCMVIMTSN 263
E Y L I ++ V + DGR+TD GRTV+F+N ++IMTSN
Sbjct: 667 TERVRRRPYSVILFDEIEKAHPDVFNILLQV---LDDGRLTDGHGRTVDFRNAVLIMTSN 723
Query: 262 IGSQDILRIFQNKDSKESKYDTMKRQIVELARETCSPEFMNHVDEFIFFFFDA*GELSR 86
IGSQ IL + +D E ++R++ E R T PEF+N VD+ I + ELSR
Sbjct: 724 IGSQWILELQGKEDWSE-----IERRVWEGMRATFRPEFLNRVDDIIIYKLLGREELSR 777
>ref|WP_048089013.1| protein disaggregation chaperone [Candidatus Methanoperedens
nitroreducens] gi|630831804|gb|KCZ73513.1| ATP-dependent
chaperone ClpB [Candidatus Methanoperedens
nitroreducens]
Length = 863
Score = 96.3 bits (238), Expect = 1e-17
Identities = 50/71 (70%), Positives = 57/71 (80%), Gaps = 1/71 (1%)
Frame = -3
Query: 548 RKSSCEYMERDAVSRLIGASPGLVGPKQG-QLTEAVL*RPYSVILFDEIEKAHPDVLNIL 372
R EYME+ V+RLIGA PG VG ++G QLTEAV RPYSVILFDEIEKAHPDV N+L
Sbjct: 636 RLDMSEYMEKHTVARLIGAPPGYVGYEEGGQLTEAVRRRPYSVILFDEIEKAHPDVFNLL 695
Query: 371 LQLLGDGRVTD 339
LQ+L DGR+TD
Sbjct: 696 LQILDDGRLTD 706
Score = 82.8 bits (203), Expect = 1e-13
Identities = 55/169 (32%), Positives = 82/169 (48%), Gaps = 2/169 (1%)
Frame = -1
Query: 616 FMGPTGVGKTELANALADYLFNTEKALV--STWKGMQFPAXXXXXXXXXXXXXXXXLKQF 443
F+GPTGVGKTEL ALA+++F+ E A++ + M+ Q
Sbjct: 608 FLGPTGVGKTELGRALAEFMFDDEAAMIRLDMSEYMEKHTVARLIGAPPGYVGYEEGGQL 667
Query: 442 FEDRILLFYLTRLRKHILMCSISCYSFWAMVG*LIQDGRVTDTSGRTVNFKNCMVIMTSN 263
E Y L I ++ + + DGR+TD GRTV+FKN ++IMTSN
Sbjct: 668 TEAVRRRPYSVILFDEIEKAHPDVFNLLLQI---LDDGRLTDGHGRTVDFKNTVIIMTSN 724
Query: 262 IGSQDILRIFQNKDSKESKYDTMKRQIVELARETCSPEFMNHVDEFIFF 116
IGSQ I + ++ M+ +++E+ PEF+N +DE I F
Sbjct: 725 IGSQWIFELLDRENE-------MRERVMEVVHSQFKPEFLNRLDEIIIF 766
>ref|WP_012176110.1| chaperone protein ClpB [Desulfococcus oleovorans]
gi|158511532|gb|ABW68499.1| ATPase AAA-2 domain protein
[Desulfococcus oleovorans Hxd3]
Length = 862
Score = 95.5 bits (236), Expect = 2e-17
Identities = 50/71 (70%), Positives = 57/71 (80%), Gaps = 1/71 (1%)
Frame = -3
Query: 548 RKSSCEYMERDAVSRLIGASPGLVGPKQG-QLTEAVL*RPYSVILFDEIEKAHPDVLNIL 372
R EYME+ AV+RLIGA PG VG ++G LTE+V RPYSV+LFDEIEKAHPDV NIL
Sbjct: 634 RVDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTESVRRRPYSVVLFDEIEKAHPDVFNIL 693
Query: 371 LQLLGDGRVTD 339
LQLL DGR+TD
Sbjct: 694 LQLLDDGRMTD 704
Score = 89.0 bits (219), Expect = 2e-15
Identities = 60/168 (35%), Positives = 83/168 (49%), Gaps = 1/168 (0%)
Frame = -1
Query: 616 FMGPTGVGKTELANALADYLFNTEKAL-VSTWKGMQFPAXXXXXXXXXXXXXXXXLKQFF 440
F+GPTGVGKTELA ALA++LF++E+ + V + M+ A
Sbjct: 607 FLGPTGVGKTELAKALAEFLFDSEQVIRVDMSEYMEKHAVARLIGAPPGYVGYEEGGYLT 666
Query: 439 EDRILLFYLTRLRKHILMCSISCYSFWAMVG*LIQDGRVTDTSGRTVNFKNCMVIMTSNI 260
E Y L I ++ L+ DGR+TD GRTV+FKN +VIMTSN+
Sbjct: 667 ESVRRRPYSVVLFDEIEKAHPDVFNILLQ---LLDDGRMTDGHGRTVDFKNTIVIMTSNV 723
Query: 259 GSQDILRIFQNKDSKESKYDTMKRQIVELARETCSPEFMNHVDEFIFF 116
GS + Q D +K QI ++ R+ PEF+N +DE I F
Sbjct: 724 GS----HLIQEMSRANEDPDQVKEQITDVLRQNFKPEFLNRIDEIIVF 767
>ref|WP_028314516.1| protein disaggregation chaperone [Desulfatibacillum
aliphaticivorans]
Length = 862
Score = 95.1 bits (235), Expect = 3e-17
Identities = 50/71 (70%), Positives = 56/71 (78%), Gaps = 1/71 (1%)
Frame = -3
Query: 548 RKSSCEYMERDAVSRLIGASPGLVGPKQG-QLTEAVL*RPYSVILFDEIEKAHPDVLNIL 372
R EYME+ +VSRLIGA PG VG +G LTEAV RPYSVILFDEIEKAHPDV N+L
Sbjct: 636 RVDMSEYMEKHSVSRLIGAPPGYVGYDEGGYLTEAVRRRPYSVILFDEIEKAHPDVFNVL 695
Query: 371 LQLLGDGRVTD 339
LQ+L DGR+TD
Sbjct: 696 LQILDDGRMTD 706
Score = 86.3 bits (212), Expect = 1e-14
Identities = 59/171 (34%), Positives = 90/171 (52%), Gaps = 4/171 (2%)
Frame = -1
Query: 616 FMGPTGVGKTELANALADYLFNTEKALVSTWKGMQFPAXXXXXXXXXXXXXXXXLKQFFE 437
FMGPTGVGKTELA ALA+++F+ ++A+V ++
Sbjct: 608 FMGPTGVGKTELAKALAEFIFDDDQAIVRVDMSEYMEKHSVSRLIGAPPGYVG-----YD 662
Query: 436 DRILLFYLTRLRKH--ILMCSISCY--SFWAMVG*LIQDGRVTDTSGRTVNFKNCMVIMT 269
+ L R R + IL I + ++ ++ DGR+TD G+TV+FKN ++IMT
Sbjct: 663 EGGYLTEAVRRRPYSVILFDEIEKAHPDVFNVLLQILDDGRMTDGHGKTVDFKNTIIIMT 722
Query: 268 SNIGSQDILRIFQNKDSKESKYDTMKRQIVELARETCSPEFMNHVDEFIFF 116
SN+GSQ I +D S + M+R++++ R T PEF+N VDE + F
Sbjct: 723 SNVGSQFI------QDLGSSNPEEMRRRVMDALRATFRPEFLNRVDETVIF 767
>ref|WP_015948179.1| chaperone protein ClpB [Desulfatibacillum alkenivorans]
gi|218762656|gb|ACL05122.1| ATP-dependent chaperone ClpB
[Desulfatibacillum alkenivorans AK-01]
Length = 862
Score = 95.1 bits (235), Expect = 3e-17
Identities = 50/71 (70%), Positives = 56/71 (78%), Gaps = 1/71 (1%)
Frame = -3
Query: 548 RKSSCEYMERDAVSRLIGASPGLVGPKQG-QLTEAVL*RPYSVILFDEIEKAHPDVLNIL 372
R EYME+ +VSRLIGA PG VG +G LTEAV RPYSVILFDEIEKAHPDV N+L
Sbjct: 636 RVDMSEYMEKHSVSRLIGAPPGYVGYDEGGYLTEAVRRRPYSVILFDEIEKAHPDVFNVL 695
Query: 371 LQLLGDGRVTD 339
LQ+L DGR+TD
Sbjct: 696 LQILDDGRMTD 706
Score = 86.3 bits (212), Expect = 1e-14
Identities = 59/171 (34%), Positives = 90/171 (52%), Gaps = 4/171 (2%)
Frame = -1
Query: 616 FMGPTGVGKTELANALADYLFNTEKALVSTWKGMQFPAXXXXXXXXXXXXXXXXLKQFFE 437
FMGPTGVGKTELA ALA+++F+ ++A+V ++
Sbjct: 608 FMGPTGVGKTELAKALAEFIFDDDQAIVRVDMSEYMEKHSVSRLIGAPPGYVG-----YD 662
Query: 436 DRILLFYLTRLRKH--ILMCSISCY--SFWAMVG*LIQDGRVTDTSGRTVNFKNCMVIMT 269
+ L R R + IL I + ++ ++ DGR+TD G+TV+FKN ++IMT
Sbjct: 663 EGGYLTEAVRRRPYSVILFDEIEKAHPDVFNVLLQILDDGRMTDGHGKTVDFKNTIIIMT 722
Query: 268 SNIGSQDILRIFQNKDSKESKYDTMKRQIVELARETCSPEFMNHVDEFIFF 116
SN+GSQ I +D S + M+R++++ R T PEF+N VDE + F
Sbjct: 723 SNVGSQFI------QDLGSSNPEEMRRRVMDALRATFRPEFLNRVDETVIF 767
>gb|KPQ41809.1| ATP-dependent Clp protease ATP-binding subunit ClpX, partial
[Candidatus Methanoperedens sp. BLZ1]
Length = 401
Score = 94.7 bits (234), Expect = 3e-17
Identities = 48/71 (67%), Positives = 57/71 (80%), Gaps = 1/71 (1%)
Frame = -3
Query: 548 RKSSCEYMERDAVSRLIGASPGLVGPKQG-QLTEAVL*RPYSVILFDEIEKAHPDVLNIL 372
R EYME+ V+RLIGA PG VG ++G QLTEAV RPY+V+LFDEIEKAHPDV N+L
Sbjct: 176 RLDMSEYMEKHTVARLIGAPPGYVGYEEGGQLTEAVRRRPYAVVLFDEIEKAHPDVFNLL 235
Query: 371 LQLLGDGRVTD 339
LQ+L DGR+TD
Sbjct: 236 LQILDDGRLTD 246
Score = 84.7 bits (208), Expect = 4e-14
Identities = 56/169 (33%), Positives = 84/169 (49%), Gaps = 2/169 (1%)
Frame = -1
Query: 616 FMGPTGVGKTELANALADYLFNTEKALV--STWKGMQFPAXXXXXXXXXXXXXXXXLKQF 443
F+GPTGVGKTEL+ ALA+++F+ E A++ + M+ Q
Sbjct: 148 FLGPTGVGKTELSRALAEFMFDDEAAMIRLDMSEYMEKHTVARLIGAPPGYVGYEEGGQL 207
Query: 442 FEDRILLFYLTRLRKHILMCSISCYSFWAMVG*LIQDGRVTDTSGRTVNFKNCMVIMTSN 263
E Y L I ++ + + DGR+TD GRTV+FKN ++IMTSN
Sbjct: 208 TEAVRRRPYAVVLFDEIEKAHPDVFNLLLQI---LDDGRLTDGHGRTVDFKNTVIIMTSN 264
Query: 262 IGSQDILRIFQNKDSKESKYDTMKRQIVELARETCSPEFMNHVDEFIFF 116
IGSQ I ++ K D M+ ++++ R PEF+N +D+ I F
Sbjct: 265 IGSQWIFELW-------DKEDKMREKVMDAVRSHFKPEFLNRLDDIIIF 306
>ref|WP_012119465.1| chaperone protein ClpB [Roseiflexus castenholzii]
gi|156232252|gb|ABU57035.1| ATPase AAA-2 domain protein
[Roseiflexus castenholzii DSM 13941]
Length = 871
Score = 94.7 bits (234), Expect = 3e-17
Identities = 47/66 (71%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Frame = -3
Query: 533 EYMERDAVSRLIGASPGLVGPKQG-QLTEAVL*RPYSVILFDEIEKAHPDVLNILLQLLG 357
EYME+ V+RLIGA PG VG ++G QLTEAV +PYSV+LFDE+EKAHPDV NILLQ+L
Sbjct: 639 EYMEKHTVARLIGAPPGYVGYEEGGQLTEAVRRKPYSVVLFDEVEKAHPDVFNILLQILD 698
Query: 356 DGRVTD 339
DGR+TD
Sbjct: 699 DGRLTD 704
Score = 85.1 bits (209), Expect = 3e-14
Identities = 63/183 (34%), Positives = 88/183 (48%), Gaps = 2/183 (1%)
Frame = -1
Query: 616 FMGPTGVGKTELANALADYLFNTEKALV--STWKGMQFPAXXXXXXXXXXXXXXXXLKQF 443
F+GPTGVGKTELA ALA++LF+ E+A+V + M+ Q
Sbjct: 606 FLGPTGVGKTELARALAEFLFDDEQAMVRIDMSEYMEKHTVARLIGAPPGYVGYEEGGQL 665
Query: 442 FEDRILLFYLTRLRKHILMCSISCYSFWAMVG*LIQDGRVTDTSGRTVNFKNCMVIMTSN 263
E Y L + ++ + + DGR+TD GR VNFKN ++IMTSN
Sbjct: 666 TEAVRRKPYSVVLFDEVEKAHPDVFNILLQI---LDDGRLTDGHGRVVNFKNTVIIMTSN 722
Query: 262 IGSQDILRIFQNKDSKESKYDTMKRQIVELARETCSPEFMNHVDEFIFFFFDA*GELSRK 83
I S I + Q S+ D ++ ++E R PEF+N +DE I F LSR+
Sbjct: 723 IASPTIQELAQRGASQ----DIIRASVMEELRTQLRPEFLNRIDEIIVF-----KPLSRE 773
Query: 82 SIG 74
IG
Sbjct: 774 QIG 776
>ref|WP_010880827.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Aquifex
aeolicus] gi|15606509|ref|NP_213889.1| ATP-dependent Clp
protease [Aquifex aeolicus VF5]
gi|2983728|gb|AAC07290.1| ATP-dependent Clp protease
[Aquifex aeolicus VF5]
Length = 810
Score = 94.0 bits (232), Expect = 6e-17
Identities = 48/66 (72%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Frame = -3
Query: 533 EYMERDAVSRLIGASPGLVGPKQG-QLTEAVL*RPYSVILFDEIEKAHPDVLNILLQLLG 357
EYME+ VSRLIGA PG VG ++G QLTEAV RPYSV+LFDEIEKAHPDV NI LQ+
Sbjct: 569 EYMEKHTVSRLIGAPPGYVGYEEGGQLTEAVRRRPYSVLLFDEIEKAHPDVFNIFLQIFD 628
Query: 356 DGRVTD 339
DGR+TD
Sbjct: 629 DGRLTD 634
Score = 85.5 bits (210), Expect = 2e-14
Identities = 57/171 (33%), Positives = 85/171 (49%), Gaps = 4/171 (2%)
Frame = -1
Query: 616 FMGPTGVGKTELANALADYLFNTEKALV--STWKGMQFPAXXXXXXXXXXXXXXXXLKQF 443
F+GPTGVGKTE A ALA+YLF TE AL+ + M+ Q
Sbjct: 536 FLGPTGVGKTETAKALAEYLFGTEDALIRFDMSEYMEKHTVSRLIGAPPGYVGYEEGGQL 595
Query: 442 FEDRILLFYLTRLRKHILMCSISCYSFWAMVG*LIQDGRVTDTSGRTVNFKNCMVIMTSN 263
E Y L I ++ + + DGR+TD GRTV+F N ++IMTSN
Sbjct: 596 TEAVRRRPYSVLLFDEIEKAHPDVFNIFLQI---FDDGRLTDGLGRTVDFSNTIIIMTSN 652
Query: 262 IGSQDILRIFQNKDSKES--KYDTMKRQIVELARETCSPEFMNHVDEFIFF 116
+G++ I + K+ ++ M++ +++ + T SPEF+N +DE I F
Sbjct: 653 LGARLITGGTMGFEKKQGLLNFEEMRKNVLDQVKRTFSPEFLNRLDEIIVF 703
>ref|WP_036732521.1| protein disaggregation chaperone [Peptococcaceae bacterium
SCADC1_2_3] gi|672907175|gb|KFI36329.1| protein
disaggregation chaperone [Peptococcaceae bacterium
SCADC1_2_3]
Length = 873
Score = 94.0 bits (232), Expect = 6e-17
Identities = 65/169 (38%), Positives = 89/169 (52%), Gaps = 2/169 (1%)
Frame = -1
Query: 616 FMGPTGVGKTELANALADYLFNTEKALV--STWKGMQFPAXXXXXXXXXXXXXXXXLKQF 443
F+GPTGVGKTELA ALA+ LF+ E+ +V + M+ Q
Sbjct: 608 FLGPTGVGKTELARALAEALFDDERNMVRLDMSEYMEKHTVARLIGAPPGYVGFEEGGQL 667
Query: 442 FEDRILLFYLTRLRKHILMCSISCYSFWAMVG*LIQDGRVTDTSGRTVNFKNCMVIMTSN 263
E Y L I ++ + + DGR+TD GRTVNFKN ++IMTSN
Sbjct: 668 TEAVRRKPYSVILFDEIEKAHPDVFNALLQI---LDDGRLTDGHGRTVNFKNTVIIMTSN 724
Query: 262 IGSQDILRIFQNKDSKESKYDTMKRQIVELARETCSPEFMNHVDEFIFF 116
IGSQ+IL FQ ++ E Y+ MK +++ L R+ PEF+N VDE + F
Sbjct: 725 IGSQEILS-FQERE--EEDYEKMKTRVLALMRQYFRPEFLNRVDETVVF 770
>ref|WP_036748672.1| protein disaggregation chaperone [Peptococcaceae bacterium
SCADC1_2_3] gi|669259502|gb|KFD41369.1| protein
disaggregation chaperone [Peptococcaceae bacterium
SCADC1_2_3] gi|672908659|gb|KFI37670.1| protein
disaggregation chaperone [Peptococcaceae bacterium
SCADC1_2_3]
Length = 873
Score = 94.0 bits (232), Expect = 6e-17
Identities = 65/169 (38%), Positives = 89/169 (52%), Gaps = 2/169 (1%)
Frame = -1
Query: 616 FMGPTGVGKTELANALADYLFNTEKALV--STWKGMQFPAXXXXXXXXXXXXXXXXLKQF 443
F+GPTGVGKTELA ALA+ LF+ E+ +V + M+ Q
Sbjct: 608 FLGPTGVGKTELARALAEALFDDERNMVRLDMSEYMEKHTVARLIGAPPGYVGFEEGGQL 667
Query: 442 FEDRILLFYLTRLRKHILMCSISCYSFWAMVG*LIQDGRVTDTSGRTVNFKNCMVIMTSN 263
E Y L I ++ + + DGR+TD GRTVNFKN ++IMTSN
Sbjct: 668 TEAVRRKPYSVILFDEIEKAHPDVFNALLQI---LDDGRLTDGHGRTVNFKNTVIIMTSN 724
Query: 262 IGSQDILRIFQNKDSKESKYDTMKRQIVELARETCSPEFMNHVDEFIFF 116
IGSQ+IL FQ ++ E Y+ MK +++ L R+ PEF+N VDE + F
Sbjct: 725 IGSQEILS-FQERE--EEDYEKMKTRVLALMRQYFRPEFLNRVDETVVF 770
>ref|WP_037378312.1| MULTISPECIES: protein disaggregation chaperone [Smithella]
gi|683426718|gb|KFZ45022.1| protein disaggregation
chaperone [Smithella sp. D17]
gi|745624440|gb|KIE16867.1| protein disaggregation
chaperone [Smithella sp. SC_K08D17]
Length = 861
Score = 93.6 bits (231), Expect = 8e-17
Identities = 48/66 (72%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Frame = -3
Query: 533 EYMERDAVSRLIGASPGLVGPKQG-QLTEAVL*RPYSVILFDEIEKAHPDVLNILLQLLG 357
EYME+ AV+RLIGA PG VG +G LTEAV +PYSV+LFDEIEKAHPDV NILLQ+L
Sbjct: 639 EYMEKHAVARLIGAPPGYVGYDEGGHLTEAVRRKPYSVLLFDEIEKAHPDVFNILLQILD 698
Query: 356 DGRVTD 339
DGR+TD
Sbjct: 699 DGRLTD 704
Score = 82.8 bits (203), Expect = 1e-13
Identities = 58/169 (34%), Positives = 83/169 (49%), Gaps = 2/169 (1%)
Frame = -1
Query: 616 FMGPTGVGKTELANALADYLFNTEKALV--STWKGMQFPAXXXXXXXXXXXXXXXXLKQF 443
F+GPTGVGKTELA ALA+++F+ E+A++ + M+ A
Sbjct: 606 FLGPTGVGKTELARALAEFMFDNEQAMIRIDMSEYMEKHAVARLIGAPPGYVGYDEGGHL 665
Query: 442 FEDRILLFYLTRLRKHILMCSISCYSFWAMVG*LIQDGRVTDTSGRTVNFKNCMVIMTSN 263
E Y L I ++ + + DGR+TD GRTV FKN +VIMTSN
Sbjct: 666 TEAVRRKPYSVLLFDEIEKAHPDVFNILLQI---LDDGRLTDGHGRTVGFKNTVVIMTSN 722
Query: 262 IGSQDILRIFQNKDSKESKYDTMKRQIVELARETCSPEFMNHVDEFIFF 116
+GSQ I + K K +++E+ R T PEF+N +D+ I F
Sbjct: 723 VGSQWIQDPSLTDEEK-------KNRLMEVLRATFKPEFLNRIDDTIMF 764
>ref|WP_054034019.1| Clp protease ClpB [Desulfatitalea tepidiphila]
Length = 861
Score = 92.8 bits (229), Expect = 1e-16
Identities = 47/71 (66%), Positives = 57/71 (80%), Gaps = 1/71 (1%)
Frame = -3
Query: 548 RKSSCEYMERDAVSRLIGASPGLVGPKQG-QLTEAVL*RPYSVILFDEIEKAHPDVLNIL 372
R EYME+ +V+RLIGA PG VG ++G LTEAV RPYSV+LFDEIEKAHP+V N+L
Sbjct: 634 RVDMSEYMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSVVLFDEIEKAHPEVFNVL 693
Query: 371 LQLLGDGRVTD 339
LQ+L DGR+TD
Sbjct: 694 LQILDDGRMTD 704
Score = 90.1 bits (222), Expect = 9e-16
Identities = 66/192 (34%), Positives = 97/192 (50%), Gaps = 4/192 (2%)
Frame = -1
Query: 616 FMGPTGVGKTELANALADYLFNTEKALVSTWKGMQFPAXXXXXXXXXXXXXXXXLKQFFE 437
FMGPTGVGKTELA ALA+++F+ E+A+V +E
Sbjct: 606 FMGPTGVGKTELAKALAEFIFDDEQAIVRVDMSEYMEKHSVARLIGAPPGYVG-----YE 660
Query: 436 DRILLFYLTRLRKH--ILMCSISCY--SFWAMVG*LIQDGRVTDTSGRTVNFKNCMVIMT 269
+ L R R + +L I + ++ ++ DGR+TD G+TV+FKN ++IMT
Sbjct: 661 EGGYLTEAVRRRPYSVVLFDEIEKAHPEVFNVLLQILDDGRMTDGHGKTVDFKNTIIIMT 720
Query: 268 SNIGSQDILRIFQNKDSKESKYDTMKRQIVELARETCSPEFMNHVDEFIFFFFDA*GELS 89
SN+GSQ I + N+ S+ M+R++ E R PEF+N +DE I FF LS
Sbjct: 721 SNVGSQYIQELGSNQRSE------MERRVTEALRAQFKPEFLNRIDETIIFF-----NLS 769
Query: 88 RKSIG*DTQITV 53
IG +I +
Sbjct: 770 ADQIGAIVEIQI 781
>ref|WP_013706468.1| chaperone protein ClpB [Desulfobacca acetoxidans]
gi|328453529|gb|AEB09358.1| ATP-dependent chaperone ClpB
[Desulfobacca acetoxidans DSM 11109]
Length = 858
Score = 92.8 bits (229), Expect = 1e-16
Identities = 49/71 (69%), Positives = 56/71 (78%), Gaps = 1/71 (1%)
Frame = -3
Query: 548 RKSSCEYMERDAVSRLIGASPGLVGPKQG-QLTEAVL*RPYSVILFDEIEKAHPDVLNIL 372
R EYME+ VSRLIGA PG VG ++G QLTEAV RPYSVILFDEIEKAHP+V + L
Sbjct: 634 RLDMSEYMEKHTVSRLIGAPPGYVGYEEGGQLTEAVRRRPYSVILFDEIEKAHPEVFDAL 693
Query: 371 LQLLGDGRVTD 339
LQ+L DGR+TD
Sbjct: 694 LQILDDGRMTD 704
Score = 87.8 bits (216), Expect = 4e-15
Identities = 63/172 (36%), Positives = 91/172 (52%), Gaps = 5/172 (2%)
Frame = -1
Query: 616 FMGPTGVGKTELANALADYLFNTEKALVSTWKGMQFPAXXXXXXXXXXXXXXXXLKQFFE 437
FMGPTGVGKTELA ALA++LF++E+A++ +E
Sbjct: 606 FMGPTGVGKTELARALAEFLFDSEQAMIRLDMSEYMEKHTVSRLIGAPPGYVG-----YE 660
Query: 436 DRILLFYLTRLRKH--ILMCSISCYS---FWAMVG*LIQDGRVTDTSGRTVNFKNCMVIM 272
+ L R R + IL I F A++ ++ DGR+TD GRTV+FKN ++IM
Sbjct: 661 EGGQLTEAVRRRPYSVILFDEIEKAHPEVFDALLQ-ILDDGRMTDGHGRTVDFKNTILIM 719
Query: 271 TSNIGSQDILRIFQNKDSKESKYDTMKRQIVELARETCSPEFMNHVDEFIFF 116
TSNIGSQ I+ + ++ M+R+++E R PEF+N VD+ I F
Sbjct: 720 TSNIGSQYIMEVTDEEE--------MRRKVMEALRFHFKPEFLNRVDDIIIF 763
>emb|CBX28867.1| Chaperone protein clpB [uncultured Desulfobacterium sp.]
gi|308272381|emb|CBX28986.1| Chaperone protein clpB
[uncultured Desulfobacterium sp.]
Length = 860
Score = 92.8 bits (229), Expect = 1e-16
Identities = 47/66 (71%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Frame = -3
Query: 533 EYMERDAVSRLIGASPGLVGPKQG-QLTEAVL*RPYSVILFDEIEKAHPDVLNILLQLLG 357
EYME+ AVSRLIGA PG VG +G LTEAV +PYSV+LFDEIEKAHP+V N+LLQ+L
Sbjct: 639 EYMEKHAVSRLIGAPPGYVGYDEGGYLTEAVRRKPYSVVLFDEIEKAHPEVFNVLLQILD 698
Query: 356 DGRVTD 339
DGR+TD
Sbjct: 699 DGRMTD 704
Score = 83.2 bits (204), Expect = 1e-13
Identities = 58/169 (34%), Positives = 86/169 (50%), Gaps = 2/169 (1%)
Frame = -1
Query: 616 FMGPTGVGKTELANALADYLFNTEKALV--STWKGMQFPAXXXXXXXXXXXXXXXXLKQF 443
FMGPTGVGKTELA ALA+++F++E+A+V + M+ A
Sbjct: 606 FMGPTGVGKTELAKALAEFIFDSEQAMVRIDMSEYMEKHAVSRLIGAPPGYVGYDEGGYL 665
Query: 442 FEDRILLFYLTRLRKHILMCSISCYSFWAMVG*LIQDGRVTDTSGRTVNFKNCMVIMTSN 263
E Y L I ++ + + DGR+TD GRTV+FKN ++IMTSN
Sbjct: 666 TEAVRRKPYSVVLFDEIEKAHPEVFNVLLQI---LDDGRMTDGHGRTVDFKNTIIIMTSN 722
Query: 262 IGSQDILRIFQNKDSKESKYDTMKRQIVELARETCSPEFMNHVDEFIFF 116
+GSQ I ++ S+ M+ ++ E + + PEF+N +DE I F
Sbjct: 723 VGSQWI------QELGISRRKEMEERVTEALKASFKPEFLNRIDETIIF 765
>gb|KRT63628.1| ATP-dependent chaperone ClpB [bacterium CSP1-2]
Length = 871
Score = 92.4 bits (228), Expect = 2e-16
Identities = 47/66 (71%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Frame = -3
Query: 533 EYMERDAVSRLIGASPGLVGPKQG-QLTEAVL*RPYSVILFDEIEKAHPDVLNILLQLLG 357
EYME+ VSRLIGA PG +G ++G QL+EA+ RPYSVILFDEIEKAH DV NILLQ+L
Sbjct: 639 EYMEKHTVSRLIGAPPGYIGYEEGGQLSEAIRRRPYSVILFDEIEKAHSDVFNILLQILD 698
Query: 356 DGRVTD 339
DGR+TD
Sbjct: 699 DGRLTD 704
Score = 84.7 bits (208), Expect = 4e-14
Identities = 60/169 (35%), Positives = 83/169 (49%), Gaps = 2/169 (1%)
Frame = -1
Query: 616 FMGPTGVGKTELANALADYLFNTEKALV--STWKGMQFPAXXXXXXXXXXXXXXXXLKQF 443
F+GPTGVGKTELA ALA+++F+ E A+V + M+ Q
Sbjct: 606 FLGPTGVGKTELARALAEFMFDDENAMVRIDMSEYMEKHTVSRLIGAPPGYIGYEEGGQL 665
Query: 442 FEDRILLFYLTRLRKHILMCSISCYSFWAMVG*LIQDGRVTDTSGRTVNFKNCMVIMTSN 263
E Y L I ++ + + DGR+TD GRTV+F+N ++IMTSN
Sbjct: 666 SEAIRRRPYSVILFDEIEKAHSDVFNILLQI---LDDGRLTDGHGRTVDFRNTIIIMTSN 722
Query: 262 IGSQDILRIFQNKDSKESKYDTMKRQIVELARETCSPEFMNHVDEFIFF 116
IGS I + K MK +++E+ R T PEF+N VDE I F
Sbjct: 723 IGSHYIQELI-------GKEVEMKIKVMEVMRNTFRPEFLNRVDETIIF 764
>gb|KPJ77639.1| Clp protease ClpB [Deltaproteobacteria bacterium SG8_13]
Length = 863
Score = 92.0 bits (227), Expect = 2e-16
Identities = 45/66 (68%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Frame = -3
Query: 533 EYMERDAVSRLIGASPGLVGPKQG-QLTEAVL*RPYSVILFDEIEKAHPDVLNILLQLLG 357
EYME+ +V+RLIGA PG VG ++G LTEA+ RPYSV+LFDEIEKAHP+V N+LLQ+L
Sbjct: 639 EYMEKHSVARLIGAPPGYVGYEEGGYLTEAIRRRPYSVVLFDEIEKAHPEVFNVLLQILD 698
Query: 356 DGRVTD 339
DGR+TD
Sbjct: 699 DGRMTD 704
Score = 83.2 bits (204), Expect = 1e-13
Identities = 60/170 (35%), Positives = 87/170 (51%), Gaps = 3/170 (1%)
Frame = -1
Query: 616 FMGPTGVGKTELANALADYLFNTEKALVSTWKGMQFPAXXXXXXXXXXXXXXXXLKQFFE 437
FMGPTGVGKTELA ALA++LF++E A+V + + E
Sbjct: 606 FMGPTGVGKTELAKALAEFLFDSEGAIVR----IDMSEYMEKHSVARLIGAPPGYVGYEE 661
Query: 436 DRILLFYLTRLRKHILMCSISCYSFWAMVG*LIQ---DGRVTDTSGRTVNFKNCMVIMTS 266
L + R +++ + + L+Q DGR+TD GRTV+FKN ++IMTS
Sbjct: 662 GGYLTEAIRRRPYSVVLFDEIEKAHPEVFNVLLQILDDGRMTDGHGRTVDFKNTLIIMTS 721
Query: 265 NIGSQDILRIFQNKDSKESKYDTMKRQIVELARETCSPEFMNHVDEFIFF 116
N+GSQ I + D K+ M +++ E R +PEF+N +DE I F
Sbjct: 722 NVGSQWIQEL-GGADRKK-----MTQRVTEALRANFTPEFLNRIDETIIF 765
>ref|WP_028842056.1| protein disaggregation chaperone [Thermodesulfovibrio islandicus]
Length = 876
Score = 92.0 bits (227), Expect = 2e-16
Identities = 48/66 (72%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Frame = -3
Query: 533 EYMERDAVSRLIGASPGLVGPKQG-QLTEAVL*RPYSVILFDEIEKAHPDVLNILLQLLG 357
EY ER VSRLIGA PG VG ++G QLTEAV RPYSV+LFDEIEKAH +V NILLQ+L
Sbjct: 641 EYQERHTVSRLIGAPPGYVGYEEGGQLTEAVRRRPYSVVLFDEIEKAHQEVFNILLQILD 700
Query: 356 DGRVTD 339
DGR+TD
Sbjct: 701 DGRLTD 706
Score = 84.7 bits (208), Expect = 4e-14
Identities = 58/172 (33%), Positives = 87/172 (50%), Gaps = 5/172 (2%)
Frame = -1
Query: 616 FMGPTGVGKTELANALADYLFNTEKALVSTWKGMQFPAXXXXXXXXXXXXXXXXLKQFFE 437
F+GPTGVGKTELA ALA++LF+ E A++ + + E
Sbjct: 608 FLGPTGVGKTELAKALAEFLFDDENAMIR----IDMSEYQERHTVSRLIGAPPGYVGYEE 663
Query: 436 DRILLFYLTRLRKHILMCSISCYSFWAMVG*LIQ---DGRVTDTSGRTVNFKNCMVIMTS 266
L + R +++ + + L+Q DGR+TD GRTV+F+N ++IMTS
Sbjct: 664 GGQLTEAVRRRPYSVVLFDEIEKAHQEVFNILLQILDDGRLTDGHGRTVDFRNTIIIMTS 723
Query: 265 NIGSQDILRIFQNKDSK--ESKYDTMKRQIVELARETCSPEFMNHVDEFIFF 116
NIGS I +NK S+ + +K +I++ R PEF+N +DE I F
Sbjct: 724 NIGSAHIQEFLENKGSEHWQDLKKDLKTRIIDDLRAFFRPEFLNRIDEIIIF 775
>ref|WP_012546043.1| chaperone protein ClpB [Thermodesulfovibrio yellowstonii]
gi|206890329|ref|YP_002249718.1| chaperone ClpB 1
[Thermodesulfovibrio yellowstonii DSM 11347]
gi|206742267|gb|ACI21324.1| chaperone ClpB 1
[Thermodesulfovibrio yellowstonii DSM 11347]
Length = 876
Score = 92.0 bits (227), Expect = 2e-16
Identities = 48/66 (72%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Frame = -3
Query: 533 EYMERDAVSRLIGASPGLVGPKQG-QLTEAVL*RPYSVILFDEIEKAHPDVLNILLQLLG 357
EY ER VSRLIGA PG VG ++G QLTEAV RPYSV+LFDEIEKAH +V NILLQ+L
Sbjct: 641 EYQERHTVSRLIGAPPGYVGYEEGGQLTEAVRRRPYSVVLFDEIEKAHQEVFNILLQILD 700
Query: 356 DGRVTD 339
DGR+TD
Sbjct: 701 DGRLTD 706
Score = 84.7 bits (208), Expect = 4e-14
Identities = 58/172 (33%), Positives = 87/172 (50%), Gaps = 5/172 (2%)
Frame = -1
Query: 616 FMGPTGVGKTELANALADYLFNTEKALVSTWKGMQFPAXXXXXXXXXXXXXXXXLKQFFE 437
F+GPTGVGKTELA ALA++LF+ E A++ + + E
Sbjct: 608 FLGPTGVGKTELAKALAEFLFDDENAMIR----IDMSEYQERHTVSRLIGAPPGYVGYEE 663
Query: 436 DRILLFYLTRLRKHILMCSISCYSFWAMVG*LIQ---DGRVTDTSGRTVNFKNCMVIMTS 266
L + R +++ + + L+Q DGR+TD GRTV+F+N ++IMTS
Sbjct: 664 GGQLTEAVRRRPYSVVLFDEIEKAHQEVFNILLQILDDGRLTDGHGRTVDFRNTIIIMTS 723
Query: 265 NIGSQDILRIFQNKDSK--ESKYDTMKRQIVELARETCSPEFMNHVDEFIFF 116
NIGS I +NK S+ + +K +I++ R PEF+N +DE I F
Sbjct: 724 NIGSAHIQEFLENKGSEHWQDLKKDLKTRIIDDLRAFFRPEFLNRIDEIIIF 775