BLASTX nr result
ID: Cornus23_contig00017414
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cornus23_contig00017414
(612 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_001691031.1| light-harvesting protein of photosystem I [C... 171 4e-40
ref|XP_005846780.1| hypothetical protein CHLNCDRAFT_31627 [Chlor... 168 2e-39
ref|XP_002948151.1| light-harvesting protein of photosystem I [V... 168 2e-39
ref|XP_001417062.1| chlorophyll a/b binding, maybe photosystem I... 162 2e-37
ref|XP_011399788.1| Chlorophyll a-b binding protein 4, chloropla... 161 2e-37
ref|XP_013905615.1| Chlorophyll a-b binding protein [Monoraphidi... 161 3e-37
tpg|DAA05912.1| TPA_inf: chloroplast light-harvesting complex I ... 158 2e-36
ref|XP_001692548.1| light-harvesting protein of photosystem I [C... 158 3e-36
gb|AAL87738.1|AF244524_1 chlorophyll a/b-binding protein [Chlamy... 158 3e-36
gb|AAX92668.1| chloroplast chlorophyll a-b binding protein [Duna... 138 3e-35
ref|XP_002950368.1| light harvesting complex a protein [Volvox c... 154 4e-35
gb|ABD37884.1| light-harvesting chlorophyll-a/b binding protein ... 154 5e-35
tpg|DAA05900.1| TPA_inf: chloroplast light-harvesting complex I ... 153 6e-35
ref|XP_002507283.1| chlorophyll a/b-binding protein, chloroplast... 148 2e-33
ref|XP_007512058.1| light-harvesting protein of photosystem I [B... 146 8e-33
ref|XP_005644739.1| chlorophyll a/b-binding protein, partial [Co... 146 8e-33
ref|XP_005644735.1| light harvesting complex a protein [Coccomyx... 144 4e-32
tpg|DAA05941.1| TPA_inf: chloroplast light-harvesting complex I ... 144 5e-32
gb|ABD37881.1| light-harvesting chlorophyll-a/b binding protein ... 141 3e-31
ref|XP_003055418.1| chlorophyll a/b-binding protein, chloroplast... 137 5e-30
>ref|XP_001691031.1| light-harvesting protein of photosystem I [Chlamydomonas
reinhardtii] gi|158279717|gb|EDP05477.1|
light-harvesting protein of photosystem I [Chlamydomonas
reinhardtii]
Length = 246
Score = 171 bits (432), Expect = 4e-40
Identities = 88/160 (55%), Positives = 110/160 (68%)
Frame = -1
Query: 480 RTPAKAPRCFRVSAYGPRPDRPKWYPGAQPPPYLDGSLQGDYGFDPLRLGSSKELLPWFK 301
R A R R + RP WYPGA P +LDGS+ GDYGFDPLRLG +K+ L WF+
Sbjct: 8 RVSAGVSRPSRATVRVSASTRPMWYPGATAPAHLDGSMLGDYGFDPLRLGVNKDNLKWFR 67
Query: 300 EAELTNGRWAMTAVPGILAIEALGKADPWWNAGATADKPIPLSWLWVIEIVTFAIIEYKR 121
EAELTNGRWAM AV GIL +A+G +W AGA + L +IE+ FA++E KR
Sbjct: 68 EAELTNGRWAMAAVVGILFTDAVG-LPKFWTAGA-EKYALDNQTLALIEVAVFAVLEGKR 125
Query: 120 YQNFKKVGESGFLNSAPFDPLGMRSEEMREKEVKNARLAM 1
Y+ +KK GE+GFL+ APFDP+GM+SEEM+ KE+KN RLAM
Sbjct: 126 YEIYKKTGETGFLSFAPFDPMGMKSEEMKLKELKNGRLAM 165
>ref|XP_005846780.1| hypothetical protein CHLNCDRAFT_31627 [Chlorella variabilis]
gi|307106432|gb|EFN54678.1| hypothetical protein
CHLNCDRAFT_31627 [Chlorella variabilis]
Length = 246
Score = 168 bits (426), Expect = 2e-39
Identities = 87/161 (54%), Positives = 108/161 (67%), Gaps = 1/161 (0%)
Frame = -1
Query: 480 RTPAKAPRCFRVSAYGPRPDRPKWYPGAQPPPYLDGSLQGDYGFDPLRLGSS-KELLPWF 304
R + R R S+ RP WYPGA PP +LDGS+ GDYGFDPLRLGS K++L ++
Sbjct: 12 RVGVRVARPTRASSVVVAAARPTWYPGATPPKHLDGSMLGDYGFDPLRLGSKDKDVLKYY 71
Query: 303 KEAELTNGRWAMTAVPGILAIEALGKADPWWNAGATADKPIPLSWLWVIEIVTFAIIEYK 124
+E ELTNGRWAM AV GIL + +G PWW AGA + L L ++EIVTFAI+E
Sbjct: 72 REGELTNGRWAMAAVAGILFTDLVGLG-PWWEAGAKVESSFDLKTLIIVEIVTFAILEGF 130
Query: 123 RYQNFKKVGESGFLNSAPFDPLGMRSEEMREKEVKNARLAM 1
R + ++K GE+G APFDPL MRS+E R KE+KN RLAM
Sbjct: 131 RAKAYEKTGETGLGPFAPFDPLNMRSDETRLKELKNGRLAM 171
>ref|XP_002948151.1| light-harvesting protein of photosystem I [Volvox carteri f.
nagariensis] gi|300266371|gb|EFJ50558.1|
light-harvesting protein of photosystem I [Volvox
carteri f. nagariensis]
Length = 247
Score = 168 bits (425), Expect = 2e-39
Identities = 95/179 (53%), Positives = 116/179 (64%), Gaps = 3/179 (1%)
Frame = -1
Query: 528 TMGQTSFVGTAVQSAHRTPAKAPRCFRVSAYGPRPDRPKWYPGAQPPPYLDGSLQGDYGF 349
TM S V V+ + T RVSA RP WYPGA P +LDG++ GDYGF
Sbjct: 3 TMMMRSRVAAGVRPSRATAV------RVSA----STRPMWYPGATAPKHLDGTMLGDYGF 52
Query: 348 DPLRLGSSKELLPWFKEAELTNGRWAMTAVPGILAIEALGKADPWWNAGA---TADKPIP 178
DPLRLG++ E L WF+EAELTNGRWAM AV GIL + +G +W AGA D P
Sbjct: 53 DPLRLGTNPEQLKWFREAELTNGRWAMAAVAGILFTDLVG-LPKFWLAGAEKYALDTPT- 110
Query: 177 LSWLWVIEIVTFAIIEYKRYQNFKKVGESGFLNSAPFDPLGMRSEEMREKEVKNARLAM 1
L +IE+ FA++E KRY +KK GE+GFL+ APFDPLGM+SEEM+ KE+KN RLAM
Sbjct: 111 ---LALIEVAVFAVLEGKRYDIYKKTGETGFLSFAPFDPLGMKSEEMKLKELKNGRLAM 166
>ref|XP_001417062.1| chlorophyll a/b binding, maybe photosystem I light harvesting
complex [Ostreococcus lucimarinus CCE9901]
gi|144577288|gb|ABO95355.1| chlorophyll a/b binding,
maybe photosystem I light harvesting complex
[Ostreococcus lucimarinus CCE9901]
Length = 252
Score = 162 bits (409), Expect = 2e-37
Identities = 88/178 (49%), Positives = 111/178 (62%)
Frame = -1
Query: 534 SLTMGQTSFVGTAVQSAHRTPAKAPRCFRVSAYGPRPDRPKWYPGAQPPPYLDGSLQGDY 355
SLT + + A R+ +APR RV+A DR WYPGA P YLDG++ GDY
Sbjct: 3 SLTTARHAIANRATIVDARSTTRAPRA-RVAARAANADRELWYPGAVAPKYLDGTMAGDY 61
Query: 354 GFDPLRLGSSKELLPWFKEAELTNGRWAMTAVPGILAIEALGKADPWWNAGATADKPIPL 175
GFDPLRLG++ E LP+ +EAEL NGRWAM A GIL +A+G WW AGA D +
Sbjct: 62 GFDPLRLGANPETLPYLQEAELMNGRWAMAATAGILFTDAVG-LPKWWEAGA-VDYGMDF 119
Query: 174 SWLWVIEIVTFAIIEYKRYQNFKKVGESGFLNSAPFDPLGMRSEEMREKEVKNARLAM 1
L ++V +I+E R + F K GESG LN+ PFDP G+ + + R KEVKNARLAM
Sbjct: 120 QQLVGFQVVAMSILEAARTRGFMKSGESGVLNAFPFDPAGLDAPDKRVKEVKNARLAM 177
>ref|XP_011399788.1| Chlorophyll a-b binding protein 4, chloroplastic [Auxenochlorella
protothecoides] gi|675354400|gb|KFM26840.1| Chlorophyll
a-b binding protein 4, chloroplastic [Auxenochlorella
protothecoides]
Length = 246
Score = 161 bits (408), Expect = 2e-37
Identities = 83/140 (59%), Positives = 98/140 (70%)
Frame = -1
Query: 420 RPKWYPGAQPPPYLDGSLQGDYGFDPLRLGSSKELLPWFKEAELTNGRWAMTAVPGILAI 241
R WYPGA+ P +LDGSL GDYGFDPLRLG ELL +++E ELTNGRWAM AV GIL
Sbjct: 35 RGTWYPGAKRPKHLDGSLPGDYGFDPLRLGVKPELLAYYREGELTNGRWAMAAVAGILFT 94
Query: 240 EALGKADPWWNAGATADKPIPLSWLWVIEIVTFAIIEYKRYQNFKKVGESGFLNSAPFDP 61
EA+G PWW AGA PI L ++EI TFA++E R + ++K GESG PFDP
Sbjct: 95 EAVG-LPPWWKAGA-EQYPIDNKTLILVEIATFAVLEGLRARGWEKTGESGAFGMHPFDP 152
Query: 60 LGMRSEEMREKEVKNARLAM 1
+ S+EMREKEVKN RLAM
Sbjct: 153 AKLLSDEMREKEVKNGRLAM 172
>ref|XP_013905615.1| Chlorophyll a-b binding protein [Monoraphidium neglectum]
gi|761976798|gb|KIZ06596.1| Chlorophyll a-b binding
protein [Monoraphidium neglectum]
Length = 246
Score = 161 bits (407), Expect = 3e-37
Identities = 85/173 (49%), Positives = 109/173 (63%)
Frame = -1
Query: 519 QTSFVGTAVQSAHRTPAKAPRCFRVSAYGPRPDRPKWYPGAQPPPYLDGSLQGDYGFDPL 340
Q + + + +++ R A R V A DRP WYPGA+PP YL+G+L GDYGFDPL
Sbjct: 2 QLTMMRSGLRAGVRPQASRARSVAVRAAA---DRPTWYPGAEPPSYLNGTLAGDYGFDPL 58
Query: 339 RLGSSKELLPWFKEAELTNGRWAMTAVPGILAIEALGKADPWWNAGATADKPIPLSWLWV 160
RLG++ E L WF+E ELTNGRWAM A GIL + +G +W AGA + L +
Sbjct: 59 RLGANPESLKWFREGELTNGRWAMAAAAGILFTDLVG-LPKFWLAGAET-YALDNKTLAL 116
Query: 159 IEIVTFAIIEYKRYQNFKKVGESGFLNSAPFDPLGMRSEEMREKEVKNARLAM 1
IE+V E KRY++FKK GESG PFDPLGM+S + + KE+KN RLAM
Sbjct: 117 IEVVVLGFAEAKRYESFKKTGESGAFGIVPFDPLGMKSADTQLKEIKNGRLAM 169
>tpg|DAA05912.1| TPA_inf: chloroplast light-harvesting complex I protein precursor
Lhca2 [Acetabularia acetabulum]
Length = 229
Score = 158 bits (400), Expect = 2e-36
Identities = 79/137 (57%), Positives = 99/137 (72%)
Frame = -1
Query: 411 WYPGAQPPPYLDGSLQGDYGFDPLRLGSSKELLPWFKEAELTNGRWAMTAVPGILAIEAL 232
WYPGA PP +LD ++ GDYGFDPLRLG++ ELLPW++EAELTNGRWAM AV GIL +A
Sbjct: 45 WYPGATPPAHLDSTMPGDYGFDPLRLGTNTELLPWYREAELTNGRWAMMAVAGILFTDAF 104
Query: 231 GKADPWWNAGATADKPIPLSWLWVIEIVTFAIIEYKRYQNFKKVGESGFLNSAPFDPLGM 52
G +W AGA I + L IEI A++EY+R++ +K+ G+SGFL PFDPL M
Sbjct: 105 G-LPKFWLAGA-EKYAIGFAPLVAIEIALMAVLEYQRFKGWKETGKSGFLAFFPFDPLNM 162
Query: 51 RSEEMREKEVKNARLAM 1
S+EM KE+KN RLAM
Sbjct: 163 ASDEMAFKEIKNGRLAM 179
>ref|XP_001692548.1| light-harvesting protein of photosystem I [Chlamydomonas
reinhardtii] gi|158278261|gb|EDP04026.1|
light-harvesting protein of photosystem I [Chlamydomonas
reinhardtii]
Length = 213
Score = 158 bits (399), Expect = 3e-36
Identities = 79/140 (56%), Positives = 88/140 (62%)
Frame = -1
Query: 420 RPKWYPGAQPPPYLDGSLQGDYGFDPLRLGSSKELLPWFKEAELTNGRWAMTAVPGILAI 241
RP W PG PP +L G+L GD GFDPL LG + L W+ EAE TNGRWAM AV GIL
Sbjct: 28 RPTWLPGLNPPAHLKGALAGDNGFDPLGLGQDEGRLKWYAEAEKTNGRWAMMAVAGILGQ 87
Query: 240 EALGKADPWWNAGATADKPIPLSWLWVIEIVTFAIIEYKRYQNFKKVGESGFLNSAPFDP 61
E LG WW AGA + IP L IE + +E KRYQ FK+ G SGF+NS PFDP
Sbjct: 88 ELLGVTPAWWEAGA-KEYDIPAQALTPIEFIVMGFLEIKRYQGFKQTGTSGFINSFPFDP 146
Query: 60 LGMRSEEMREKEVKNARLAM 1
GM S M KEVKN RLAM
Sbjct: 147 AGMNSPSMATKEVKNGRLAM 166
>gb|AAL87738.1|AF244524_1 chlorophyll a/b-binding protein [Chlamydomonas reinhardtii]
Length = 222
Score = 158 bits (399), Expect = 3e-36
Identities = 79/140 (56%), Positives = 88/140 (62%)
Frame = -1
Query: 420 RPKWYPGAQPPPYLDGSLQGDYGFDPLRLGSSKELLPWFKEAELTNGRWAMTAVPGILAI 241
RP W PG PP +L G+L GD GFDPL LG + L W+ EAE TNGRWAM AV GIL
Sbjct: 28 RPTWLPGLNPPAHLKGALAGDNGFDPLGLGQDEGRLKWYAEAEKTNGRWAMMAVAGILGQ 87
Query: 240 EALGKADPWWNAGATADKPIPLSWLWVIEIVTFAIIEYKRYQNFKKVGESGFLNSAPFDP 61
E LG WW AGA + IP L IE + +E KRYQ FK+ G SGF+NS PFDP
Sbjct: 88 ELLGVTPAWWEAGA-KEYDIPAQALTPIEFIVMGFLEIKRYQGFKQTGTSGFINSFPFDP 146
Query: 60 LGMRSEEMREKEVKNARLAM 1
GM S M KEVKN RLAM
Sbjct: 147 AGMNSPSMATKEVKNGRLAM 166
>gb|AAX92668.1| chloroplast chlorophyll a-b binding protein [Dunaliella salina]
Length = 217
Score = 138 bits (347), Expect(2) = 3e-35
Identities = 77/168 (45%), Positives = 100/168 (59%), Gaps = 5/168 (2%)
Frame = -1
Query: 543 SFSSLTMGQTSFVGTAVQSAHR-----TPAKAPRCFRVSAYGPRPDRPKWYPGAQPPPYL 379
+ S+L M ++ G +++++ R TPA A R A R WYPGA PP +L
Sbjct: 1 TMSALLMNKSVASGASLKASTRSVGRITPAPARRSVAAQAA-----REMWYPGATPPAHL 55
Query: 378 DGSLQGDYGFDPLRLGSSKELLPWFKEAELTNGRWAMTAVPGILAIEALGKADPWWNAGA 199
DGS+ GDYGFDPLRLG++ + + WF+EAELTNGRWAM AV GIL + +G WW AGA
Sbjct: 56 DGSMLGDYGFDPLRLGTNPDRMKWFREAELTNGRWAMAAVVGILFTDLVG-LPKWWEAGA 114
Query: 198 TADKPIPLSWLWVIEIVTFAIIEYKRYQNFKKVGESGFLNSAPFDPLG 55
PI L +IEI FA +E KRY+ +KK G +G P P G
Sbjct: 115 QT-YPIDNQTLAIIEIAVFAFLEAKRYEGYKKTGGTGIRFLLPLRPHG 161
Score = 37.7 bits (86), Expect(2) = 3e-35
Identities = 16/26 (61%), Positives = 18/26 (69%)
Frame = -3
Query: 79 LSPLRPPGHAQRGDAGKGGEERPPRH 2
L PLRP GHAQ + +G EERPP H
Sbjct: 154 LLPLRPHGHAQPREGAEGAEERPPGH 179
>ref|XP_002950368.1| light harvesting complex a protein [Volvox carteri f. nagariensis]
gi|5902598|gb|AAD55569.1|AF110787_1 light harvesting
complex a protein [Volvox carteri f. nagariensis]
gi|300264373|gb|EFJ48569.1| light harvesting complex a
protein [Volvox carteri f. nagariensis]
Length = 214
Score = 154 bits (389), Expect = 4e-35
Identities = 78/140 (55%), Positives = 88/140 (62%)
Frame = -1
Query: 420 RPKWYPGAQPPPYLDGSLQGDYGFDPLRLGSSKELLPWFKEAELTNGRWAMTAVPGILAI 241
RP W PG PP +L GSL GD GFDPL LG + L W+ EAE TNGRWAM AV GIL
Sbjct: 28 RPTWLPGLSPPAHLKGSLAGDSGFDPLGLGQDEGRLKWYAEAEKTNGRWAMMAVTGILGQ 87
Query: 240 EALGKADPWWNAGATADKPIPLSWLWVIEIVTFAIIEYKRYQNFKKVGESGFLNSAPFDP 61
E LG W+ AGA + IP + L IE + +E KRYQ FK G SGF+NS PFDP
Sbjct: 88 ELLGVTPSWYEAGA-KEYDIPSTPLTAIEFIVMGFLEIKRYQGFKTTGTSGFINSFPFDP 146
Query: 60 LGMRSEEMREKEVKNARLAM 1
G+ S M KEVKN RLAM
Sbjct: 147 AGLNSASMATKEVKNGRLAM 166
>gb|ABD37884.1| light-harvesting chlorophyll-a/b binding protein Lhca5.2
[Mesostigma viride] gi|145079736|tpg|DAA05927.1|
TPA_inf: chloroplast light-harvesting complex I protein
precursor Lhca9 [Mesostigma viride]
Length = 225
Score = 154 bits (388), Expect = 5e-35
Identities = 78/143 (54%), Positives = 95/143 (66%), Gaps = 2/143 (1%)
Frame = -1
Query: 423 DRPKWYPGAQPPPYLDGSLQGDYGFDPLRLGSSKELLPWFKEAELTNGRWAMTAVPGILA 244
DR W P PP +L+G+L GDYG+DP+ L + + L WF EAE TNGRWAM V GIL
Sbjct: 38 DRTLWLPNTVPPAHLNGTLPGDYGYDPIGLATDPDRLAWFVEAERTNGRWAMAGVAGILF 97
Query: 243 IEAL--GKADPWWNAGATADKPIPLSWLWVIEIVTFAIIEYKRYQNFKKVGESGFLNSAP 70
+AL G A PW++ GA + PIPL L IE V F +E KR + +KK G++G LN P
Sbjct: 98 TDALHIGSA-PWFSIGAELESPIPLWGLATIEFVIFGFLEMKRLEGWKKTGQNGLLNWFP 156
Query: 69 FDPLGMRSEEMREKEVKNARLAM 1
FDPLGM S+EM KEVKN RLAM
Sbjct: 157 FDPLGMNSKEMMVKEVKNGRLAM 179
>tpg|DAA05900.1| TPA_inf: chloroplast light-harvesting complex I protein precursor
Lhca9 [Acetabularia acetabulum]
Length = 192
Score = 153 bits (387), Expect = 6e-35
Identities = 79/141 (56%), Positives = 90/141 (63%)
Frame = -1
Query: 423 DRPKWYPGAQPPPYLDGSLQGDYGFDPLRLGSSKELLPWFKEAELTNGRWAMTAVPGILA 244
DR W GA P +LDGSL GD+GFDPL LGS + L W+ EAE TNGRWAM AV GIL
Sbjct: 8 DRQMWLVGAAAPEHLDGSLAGDFGFDPLGLGSEPDRLKWYVEAEKTNGRWAMMAVAGILG 67
Query: 243 IEALGKADPWWNAGATADKPIPLSWLWVIEIVTFAIIEYKRYQNFKKVGESGFLNSAPFD 64
E LG W+ AGA D IP L +E + +E KRYQ FK G SGFLNS PFD
Sbjct: 68 QELLGVTPKWFEAGA-KDYGIPFFPLLAMEAIILGFLETKRYQGFKTTGSSGFLNSFPFD 126
Query: 63 PLGMRSEEMREKEVKNARLAM 1
P M S +M+ KE+KN RLAM
Sbjct: 127 PANMNSPDMQLKEIKNGRLAM 147
>ref|XP_002507283.1| chlorophyll a/b-binding protein, chloroplast precursor [Micromonas
sp. RCC299] gi|226522558|gb|ACO68541.1| chlorophyll
a/b-binding protein, chloroplast precursor [Micromonas
sp. RCC299]
Length = 247
Score = 148 bits (374), Expect = 2e-33
Identities = 73/137 (53%), Positives = 89/137 (64%)
Frame = -1
Query: 411 WYPGAQPPPYLDGSLQGDYGFDPLRLGSSKELLPWFKEAELTNGRWAMTAVPGILAIEAL 232
W PG QPPPYLDG++ GDYGFDPLRLG++ + LP+ +EAEL NGRWAM A GIL +A+
Sbjct: 38 WLPGTQPPPYLDGTMAGDYGFDPLRLGANPDTLPYLQEAELMNGRWAMHATAGILFTDAV 97
Query: 231 GKADPWWNAGATADKPIPLSWLWVIEIVTFAIIEYKRYQNFKKVGESGFLNSAPFDPLGM 52
G WW AG A L L ++V A +E R + F G+SG + + PFDP G
Sbjct: 98 G-LPKWWEAGEAALGDWNLQTLVAFQVVIMAFLEAARIRGFMTTGQSGVIGNFPFDPTGQ 156
Query: 51 RSEEMREKEVKNARLAM 1
S EMR KEVKN RLAM
Sbjct: 157 DSPEMRVKEVKNGRLAM 173
>ref|XP_007512058.1| light-harvesting protein of photosystem I [Bathycoccus prasinos]
gi|424513524|emb|CCO66146.1| light-harvesting protein of
photosystem I [Bathycoccus prasinos]
Length = 212
Score = 146 bits (369), Expect = 8e-33
Identities = 75/137 (54%), Positives = 90/137 (65%)
Frame = -1
Query: 411 WYPGAQPPPYLDGSLQGDYGFDPLRLGSSKELLPWFKEAELTNGRWAMTAVPGILAIEAL 232
WYPGA P YLDGS+ GDYGFDPLRLG++KE LP+ +EAEL NGRWAM A G+LA ++
Sbjct: 2 WYPGATAPDYLDGSMAGDYGFDPLRLGANKESLPYLQEAELMNGRWAMYATIGVLATDSN 61
Query: 231 GKADPWWNAGATADKPIPLSWLWVIEIVTFAIIEYKRYQNFKKVGESGFLNSAPFDPLGM 52
+W AGA AD I L V +++ I+E R + F K GESG + PFDP GM
Sbjct: 62 PSLPKFWEAGA-ADYDIDFKTLVVTQVIVMGILEALRIRGFMKTGESGLGANFPFDPAGM 120
Query: 51 RSEEMREKEVKNARLAM 1
S R KEVKN RLAM
Sbjct: 121 DSPAARVKEVKNGRLAM 137
>ref|XP_005644739.1| chlorophyll a/b-binding protein, partial [Coccomyxa subellipsoidea
C-169] gi|384246706|gb|EIE20195.1| chlorophyll
a/b-binding protein, partial [Coccomyxa subellipsoidea
C-169]
Length = 203
Score = 146 bits (369), Expect = 8e-33
Identities = 73/137 (53%), Positives = 88/137 (64%)
Frame = -1
Query: 411 WYPGAQPPPYLDGSLQGDYGFDPLRLGSSKELLPWFKEAELTNGRWAMTAVPGILAIEAL 232
WYPGA+ P YLDGSL GD GFDP+RL ++ LPW E EL NGR AM AV GIL +EA
Sbjct: 1 WYPGAEAPSYLDGSLPGDRGFDPMRLAANPSTLPWLVEGELYNGRVAMLAVAGILLVEAA 60
Query: 231 GKADPWWNAGATADKPIPLSWLWVIEIVTFAIIEYKRYQNFKKVGESGFLNSAPFDPLGM 52
G PWW+A D P+P V+ +A E KR+ NF+K GE+G L PFDPL M
Sbjct: 61 G-LGPWWSAPFRVDWPLPYWPGVVVFHAIYAAFEVKRFDNFQKYGETGLLGFVPFDPLNM 119
Query: 51 RSEEMREKEVKNARLAM 1
R + R+ EV+N RLAM
Sbjct: 120 RDDYKRQSEVRNGRLAM 136
>ref|XP_005644735.1| light harvesting complex a protein [Coccomyxa subellipsoidea C-169]
gi|384246702|gb|EIE20191.1| light harvesting complex a
protein [Coccomyxa subellipsoidea C-169]
Length = 230
Score = 144 bits (363), Expect = 4e-32
Identities = 75/140 (53%), Positives = 86/140 (61%)
Frame = -1
Query: 420 RPKWYPGAQPPPYLDGSLQGDYGFDPLRLGSSKELLPWFKEAELTNGRWAMTAVPGILAI 241
R W P +PP +L G L GD GFDPL LGS E L W+ EAE TNGRWAM V GIL
Sbjct: 35 RGLWLPDTEPPAHLKGELAGDRGFDPLGLGSEPERLKWYTEAEKTNGRWAMAGVAGILGQ 94
Query: 240 EALGKADPWWNAGATADKPIPLSWLWVIEIVTFAIIEYKRYQNFKKVGESGFLNSAPFDP 61
E LG W+ AGA D P L +E + +E KRYQ FKK G+SGFL+S PFDP
Sbjct: 95 ELLGVQPKWFEAGA-KDYGFPPLALISLEFLLLGFLELKRYQGFKKTGKSGFLDSFPFDP 153
Query: 60 LGMRSEEMREKEVKNARLAM 1
+ SE EKE+KN RLAM
Sbjct: 154 ANLDSEANAEKEIKNGRLAM 173
>tpg|DAA05941.1| TPA_inf: chloroplast light-harvesting complex I protein precursor
Lhca2 [Micromonas sp. CCMP490]
Length = 245
Score = 144 bits (362), Expect = 5e-32
Identities = 77/166 (46%), Positives = 101/166 (60%)
Frame = -1
Query: 498 AVQSAHRTPAKAPRCFRVSAYGPRPDRPKWYPGAQPPPYLDGSLQGDYGFDPLRLGSSKE 319
A++++ R P KA +A GP+ W PG++PP YLDG++ GDYGFDPLRLG + E
Sbjct: 10 ALRASVRAPVKARGMSVKAAAGPQ----HWLPGSEPPAYLDGTMAGDYGFDPLRLGQNAE 65
Query: 318 LLPWFKEAELTNGRWAMTAVPGILAIEALGKADPWWNAGATADKPIPLSWLWVIEIVTFA 139
LP+ +EAEL NGRWAM A GIL +A+G +W AG A L L I++V
Sbjct: 66 TLPYLQEAELMNGRWAMHATAGILFTDAVG-LPKFWEAGDAALGDWDLKTLVAIQVVVMG 124
Query: 138 IIEYKRYQNFKKVGESGFLNSAPFDPLGMRSEEMREKEVKNARLAM 1
+E R + F GESG + + PFDP G S M+ KE+KN RLAM
Sbjct: 125 FLEAARIRGFYATGESGVVGNFPFDPSGQDSPAMKVKEIKNGRLAM 170
>gb|ABD37881.1| light-harvesting chlorophyll-a/b binding protein Lhca4.1
[Mesostigma viride] gi|145079679|tpg|DAA05923.1|
TPA_inf: chloroplast light-harvesting complex I protein
precursor Lhca2 [Mesostigma viride]
Length = 264
Score = 141 bits (355), Expect = 3e-31
Identities = 82/182 (45%), Positives = 108/182 (59%), Gaps = 7/182 (3%)
Frame = -1
Query: 525 MGQTSFVGTAVQSAHRTPAKAPRCFRVSAYGPRPDRPKWYPGAQPPPYLDGSLQGDYGFD 346
+ + +FVG AV+++ + P VS KWY GA+PP YLDGS+ GDYG+D
Sbjct: 15 LARKAFVGQAVKASAKPAGAKP----VSTVVRADLGKKWYTGAKPPAYLDGSMPGDYGYD 70
Query: 345 PLRLGSSKELLPWFKEAELTNGRWAMTAVPGILAIEAL---GKAD--PWWNAGAT--ADK 187
PLR+G + ELL W+++ E+ NGRWAM V G+L +AL G +D W+ AGA A
Sbjct: 71 PLRMGGNPELLKWYQQGEIENGRWAMIGVAGMLFTDALTQFGISDLPDWYEAGAVAQASS 130
Query: 186 PIPLSWLWVIEIVTFAIIEYKRYQNFKKVGESGFLNSAPFDPLGMRSEEMREKEVKNARL 7
P L L IEI FA +E R +KK G+ GFL D +GM S +MR KE+KN RL
Sbjct: 131 PFDLQTLIAIEIFVFATVEGFRISTWKKTGKPGFL-----DIMGMDSPDMRLKEIKNGRL 185
Query: 6 AM 1
AM
Sbjct: 186 AM 187
>ref|XP_003055418.1| chlorophyll a/b-binding protein, chloroplast precursor [Micromonas
pusilla CCMP1545] gi|226463392|gb|EEH60670.1|
chlorophyll a/b-binding protein, chloroplast precursor
[Micromonas pusilla CCMP1545]
Length = 254
Score = 137 bits (345), Expect = 5e-30
Identities = 69/137 (50%), Positives = 86/137 (62%)
Frame = -1
Query: 411 WYPGAQPPPYLDGSLQGDYGFDPLRLGSSKELLPWFKEAELTNGRWAMTAVPGILAIEAL 232
W PG +PP YLDG++ DYGFDPLRLG++ E LP+ +EAEL NGRWAM A GIL +A+
Sbjct: 44 WLPGTEPPSYLDGTMPADYGFDPLRLGANPETLPYLQEAELMNGRWAMHATAGILFTDAV 103
Query: 231 GKADPWWNAGATADKPIPLSWLWVIEIVTFAIIEYKRYQNFKKVGESGFLNSAPFDPLGM 52
G +W AG A L L I++V +E R + F GESG + + PFDP G
Sbjct: 104 G-LPKFWEAGEAALGDWDLKTLVAIQVVVMGFLEAARIRGFMATGESGVVGNFPFDPTGQ 162
Query: 51 RSEEMREKEVKNARLAM 1
S M+ KEVKN RLAM
Sbjct: 163 DSPAMKVKEVKNGRLAM 179