BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00017406
         (543 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010036162.1| PREDICTED: pre-mRNA-processing factor 39 iso...    60   8e-07
ref|XP_010036158.1| PREDICTED: pre-mRNA-processing factor 39 iso...    60   8e-07
ref|XP_010036157.1| PREDICTED: pre-mRNA-processing factor 39 iso...    60   8e-07
emb|CDP03793.1| unnamed protein product [Coffea canephora]             59   2e-06

>ref|XP_010036162.1| PREDICTED: pre-mRNA-processing factor 39 isoform X4 [Eucalyptus
           grandis]
          Length = 723

 Score = 59.7 bits (143), Expect = 8e-07
 Identities = 37/75 (49%), Positives = 43/75 (57%)
 Frame = -2

Query: 227 FMQVCSYLPNHLSVRQGGSLLSYLRGLPVPPMEYSLCISPKFPLFVLFI*FCSFELELCD 48
           F +V +YLPNHLSVRQGGSLLSYLRGL +P    S    P   +  LF+      +   D
Sbjct: 431 FSKVSTYLPNHLSVRQGGSLLSYLRGLSIPQRSTSYAYLPVLCVIGLFL---WRSMRRRD 487

Query: 47  P*YTFSVDQVVKLYE 3
               F   QVVKLYE
Sbjct: 488 NIIMFCGCQVVKLYE 502


>ref|XP_010036158.1| PREDICTED: pre-mRNA-processing factor 39 isoform X2 [Eucalyptus
           grandis] gi|702492195|ref|XP_010036159.1| PREDICTED:
           pre-mRNA-processing factor 39 isoform X2 [Eucalyptus
           grandis]
          Length = 823

 Score = 59.7 bits (143), Expect = 8e-07
 Identities = 37/75 (49%), Positives = 43/75 (57%)
 Frame = -2

Query: 227 FMQVCSYLPNHLSVRQGGSLLSYLRGLPVPPMEYSLCISPKFPLFVLFI*FCSFELELCD 48
           F +V +YLPNHLSVRQGGSLLSYLRGL +P    S    P   +  LF+      +   D
Sbjct: 372 FSKVSTYLPNHLSVRQGGSLLSYLRGLSIPQRSTSYAYLPVLCVIGLFL---WRSMRRRD 428

Query: 47  P*YTFSVDQVVKLYE 3
               F   QVVKLYE
Sbjct: 429 NIIMFCGCQVVKLYE 443


>ref|XP_010036157.1| PREDICTED: pre-mRNA-processing factor 39 isoform X1 [Eucalyptus
           grandis]
          Length = 882

 Score = 59.7 bits (143), Expect = 8e-07
 Identities = 37/75 (49%), Positives = 43/75 (57%)
 Frame = -2

Query: 227 FMQVCSYLPNHLSVRQGGSLLSYLRGLPVPPMEYSLCISPKFPLFVLFI*FCSFELELCD 48
           F +V +YLPNHLSVRQGGSLLSYLRGL +P    S    P   +  LF+      +   D
Sbjct: 431 FSKVSTYLPNHLSVRQGGSLLSYLRGLSIPQRSTSYAYLPVLCVIGLFL---WRSMRRRD 487

Query: 47  P*YTFSVDQVVKLYE 3
               F   QVVKLYE
Sbjct: 488 NIIMFCGCQVVKLYE 502


>emb|CDP03793.1| unnamed protein product [Coffea canephora]
          Length = 439

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 27/35 (77%), Positives = 30/35 (85%)
 Frame = -3

Query: 238 F*CYLCRCVLIFLTIYLSGKEGPSFPI*GASLFRQ 134
           F CY CRCVLIFLTIYLSGK+GP F I GASLF++
Sbjct: 18  FQCYACRCVLIFLTIYLSGKDGPFFHIRGASLFQR 52