BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00017251
         (294 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_005650981.1| chlorophyll a/b-binding protein [Coccomyxa s...    65   1e-08
ref|XP_013904099.1| Chlorophyll a-b binding protein of LHCII typ...    64   6e-08
gb|ABD37899.1| light-harvesting chlorophyll-a/b binding protein ...    63   7e-08
gb|ACQ99368.1| chloroplast light-harvesting chlorophyll-a/b bind...    63   1e-07
ref|XP_001779229.1| predicted protein [Physcomitrella patens] gi...    63   1e-07
ref|XP_011397167.1| Chlorophyll a-b binding protein 3C, chloropl...    62   1e-07
ref|XP_005648382.1| hypothetical protein COCSUDRAFT_28488 [Cocco...    62   1e-07
ref|XP_005651417.1| chlorophyll a/b-binding protein [Coccomyxa s...    62   2e-07
dbj|BAA78594.1| hypothetical protein [Chlamydomonas sp. HS-5]          62   2e-07
ref|XP_002956352.1| hypothetical protein VOLCADRAFT_77072 [Volvo...    62   2e-07
ref|XP_001693987.1| light-harvesting protein of photosystem II [...    61   3e-07
ref|XP_013900342.1| Chlorophyll a-b binding protein of LHCII typ...    61   3e-07
ref|XP_013897717.1| Chlorophyll a-b binding protein of LHCII typ...    61   3e-07
ref|XP_001694115.1| chlorophyll a-b binding protein of LHCII [Ch...    61   3e-07
ref|XP_002949075.1| hypothetical protein VOLCADRAFT_80470 [Volvo...    61   3e-07
ref|XP_002951637.1| hypothetical protein VOLCADRAFT_109135 [Volv...    61   3e-07
ref|XP_002952704.1| light-harvesting chlorophyll a/b-binding pro...    61   3e-07
ref|XP_002952626.1| hypothetical protein VOLCADRAFT_81918 [Volvo...    61   3e-07
gb|ABD37910.1| light-harvesting chlorophyll-a/b binding protein ...    61   3e-07
gb|ABD37911.1| light-harvesting chlorophyll-a/b binding protein ...    61   3e-07

>ref|XP_005650981.1| chlorophyll a/b-binding protein [Coccomyxa subellipsoidea C-169]
           gi|384252962|gb|EIE26437.1| chlorophyll a/b-binding
           protein [Coccomyxa subellipsoidea C-169]
          Length = 245

 Score = 65.5 bits (158), Expect = 1e-08
 Identities = 26/33 (78%), Positives = 28/33 (84%)
 Frame = -3

Query: 100 EWYGPDRPGFLGPFTNPPDYLRGEFAGDYGWDT 2
           E+YGPDR GFLGPFT  P YL+GEF GDYGWDT
Sbjct: 30  EFYGPDRAGFLGPFTESPSYLKGEFPGDYGWDT 62


>ref|XP_013904099.1| Chlorophyll a-b binding protein of LHCII typeI [Monoraphidium
           neglectum] gi|761975074|gb|KIZ05080.1| Chlorophyll a-b
           binding protein of LHCII typeI [Monoraphidium neglectum]
          Length = 249

 Score = 63.5 bits (153), Expect = 6e-08
 Identities = 27/34 (79%), Positives = 27/34 (79%), Gaps = 1/34 (2%)
 Frame = -3

Query: 100 EWYGPDRPGFLGPFTNP-PDYLRGEFAGDYGWDT 2
           EWYGPDRP FLGPF    PDYL GEF GDYGWDT
Sbjct: 31  EWYGPDRPKFLGPFEGETPDYLTGEFPGDYGWDT 64


>gb|ABD37899.1| light-harvesting chlorophyll-a/b binding protein LhcbM2
           [Acutodesmus obliquus]
          Length = 249

 Score = 63.2 bits (152), Expect = 7e-08
 Identities = 27/35 (77%), Positives = 29/35 (82%), Gaps = 2/35 (5%)
 Frame = -3

Query: 100 EWYGPDRPGFLGPFT--NPPDYLRGEFAGDYGWDT 2
           EWYGPDRP FLGPF+  + P YL GEFAGDYGWDT
Sbjct: 28  EWYGPDRPKFLGPFSEGDTPAYLTGEFAGDYGWDT 62


>gb|ACQ99368.1| chloroplast light-harvesting chlorophyll-a/b binding protein
           [Monoraphidium convolutum]
          Length = 248

 Score = 62.8 bits (151), Expect = 1e-07
 Identities = 26/35 (74%), Positives = 29/35 (82%), Gaps = 2/35 (5%)
 Frame = -3

Query: 100 EWYGPDRPGFLGPFT--NPPDYLRGEFAGDYGWDT 2
           EWYGPDRP FLGPF+  + P+YL GEF GDYGWDT
Sbjct: 27  EWYGPDRPKFLGPFSEGDTPEYLTGEFPGDYGWDT 61


>ref|XP_001779229.1| predicted protein [Physcomitrella patens]
           gi|162669328|gb|EDQ55917.1| predicted protein
           [Physcomitrella patens]
          Length = 266

 Score = 62.8 bits (151), Expect = 1e-07
 Identities = 26/33 (78%), Positives = 28/33 (84%), Gaps = 1/33 (3%)
 Frame = -3

Query: 97  WYGPDRPGFLGPFT-NPPDYLRGEFAGDYGWDT 2
           WYGPDRP FLGPF+ N P YL+GEF GDYGWDT
Sbjct: 48  WYGPDRPLFLGPFSGNTPSYLKGEFPGDYGWDT 80


>ref|XP_011397167.1| Chlorophyll a-b binding protein 3C, chloroplastic [Auxenochlorella
           protothecoides] gi|675351840|gb|KFM24280.1| Chlorophyll
           a-b binding protein 3C, chloroplastic [Auxenochlorella
           protothecoides]
          Length = 268

 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 26/34 (76%), Positives = 28/34 (82%), Gaps = 2/34 (5%)
 Frame = -3

Query: 97  WYGPDRPGFLGPFTN--PPDYLRGEFAGDYGWDT 2
           WYGPDRP FLGPF++   P YL GEFAGDYGWDT
Sbjct: 47  WYGPDRPKFLGPFSDGITPSYLNGEFAGDYGWDT 80


>ref|XP_005648382.1| hypothetical protein COCSUDRAFT_28488 [Coccomyxa subellipsoidea
           C-169] gi|384250359|gb|EIE23838.1| hypothetical protein
           COCSUDRAFT_28488 [Coccomyxa subellipsoidea C-169]
          Length = 275

 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 24/32 (75%), Positives = 25/32 (78%)
 Frame = -3

Query: 97  WYGPDRPGFLGPFTNPPDYLRGEFAGDYGWDT 2
           WYG DRPG+LG FT  P YL GEF GDYGWDT
Sbjct: 66  WYGADRPGYLGAFTRSPSYLNGEFPGDYGWDT 97


>ref|XP_005651417.1| chlorophyll a/b-binding protein [Coccomyxa subellipsoidea C-169]
           gi|384253398|gb|EIE26873.1| chlorophyll a/b-binding
           protein [Coccomyxa subellipsoidea C-169]
          Length = 250

 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 25/33 (75%), Positives = 27/33 (81%)
 Frame = -3

Query: 100 EWYGPDRPGFLGPFTNPPDYLRGEFAGDYGWDT 2
           E+YGPDR  FLGPFT+ P YL GEF GDYGWDT
Sbjct: 35  EFYGPDRATFLGPFTDTPSYLNGEFPGDYGWDT 67


>dbj|BAA78594.1| hypothetical protein [Chlamydomonas sp. HS-5]
          Length = 155

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 26/34 (76%), Positives = 27/34 (79%), Gaps = 1/34 (2%)
 Frame = -3

Query: 100 EWYGPDRPGFLGPF-TNPPDYLRGEFAGDYGWDT 2
           EWYGPDRP +LGPF  N P YL GEF GDYGWDT
Sbjct: 61  EWYGPDRPKWLGPFFQNTPSYLTGEFPGDYGWDT 94


>ref|XP_002956352.1| hypothetical protein VOLCADRAFT_77072 [Volvox carteri f.
           nagariensis] gi|300258258|gb|EFJ42496.1| hypothetical
           protein VOLCADRAFT_77072 [Volvox carteri f. nagariensis]
          Length = 250

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 26/35 (74%), Positives = 28/35 (80%), Gaps = 2/35 (5%)
 Frame = -3

Query: 100 EWYGPDRPGFLGPFT--NPPDYLRGEFAGDYGWDT 2
           EWYGPDRP FLGPF+  + P YL GEF GDYGWDT
Sbjct: 31  EWYGPDRPKFLGPFSEGDVPSYLTGEFPGDYGWDT 65


>ref|XP_001693987.1| light-harvesting protein of photosystem II [Chlamydomonas
           reinhardtii] gi|15430556|dbj|BAB64413.1|
           light-harvesting chlorophyll-a/b binding protein LhcII-3
           [Chlamydomonas reinhardtii] gi|15430564|dbj|BAB64417.1|
           light-harvesting chlorophyll-a/b binding protein LhcII-3
           [Chlamydomonas reinhardtii] gi|158277154|gb|EDP02923.1|
           light-harvesting protein of photosystem II
           [Chlamydomonas reinhardtii]
          Length = 249

 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 26/35 (74%), Positives = 28/35 (80%), Gaps = 2/35 (5%)
 Frame = -3

Query: 100 EWYGPDRPGFLGPFT--NPPDYLRGEFAGDYGWDT 2
           EWYGPDRP FLGPF+  + P YL GEF GDYGWDT
Sbjct: 31  EWYGPDRPKFLGPFSEGDTPAYLTGEFPGDYGWDT 65


>ref|XP_013900342.1| Chlorophyll a-b binding protein of LHCII type I [Monoraphidium
           neglectum] gi|761970561|gb|KIZ01323.1| Chlorophyll a-b
           binding protein of LHCII type I [Monoraphidium
           neglectum]
          Length = 257

 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 26/35 (74%), Positives = 28/35 (80%), Gaps = 2/35 (5%)
 Frame = -3

Query: 100 EWYGPDRPGFLGPFT--NPPDYLRGEFAGDYGWDT 2
           EWYGPDRP FLGPF+  + P YL GEF GDYGWDT
Sbjct: 34  EWYGPDRPKFLGPFSEGDTPAYLTGEFPGDYGWDT 68


>ref|XP_013897717.1| Chlorophyll a-b binding protein of LHCII typeI [Monoraphidium
           neglectum] gi|761967158|gb|KIY98697.1| Chlorophyll a-b
           binding protein of LHCII typeI [Monoraphidium neglectum]
          Length = 258

 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 26/35 (74%), Positives = 28/35 (80%), Gaps = 2/35 (5%)
 Frame = -3

Query: 100 EWYGPDRPGFLGPFT--NPPDYLRGEFAGDYGWDT 2
           EWYGPDRP FLGPF+  + P YL GEF GDYGWDT
Sbjct: 35  EWYGPDRPKFLGPFSEGDTPAYLTGEFPGDYGWDT 69


>ref|XP_001694115.1| chlorophyll a-b binding protein of LHCII [Chlamydomonas
           reinhardtii] gi|12658406|gb|AAK01125.1|AF330793_1
           light-harvesting complex II protein precursor
           [Chlamydomonas reinhardtii] gi|158277282|gb|EDP03051.1|
           chlorophyll a-b binding protein of LHCII [Chlamydomonas
           reinhardtii]
          Length = 249

 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 26/35 (74%), Positives = 28/35 (80%), Gaps = 2/35 (5%)
 Frame = -3

Query: 100 EWYGPDRPGFLGPFT--NPPDYLRGEFAGDYGWDT 2
           EWYGPDRP FLGPF+  + P YL GEF GDYGWDT
Sbjct: 31  EWYGPDRPKFLGPFSEGDTPAYLTGEFPGDYGWDT 65


>ref|XP_002949075.1| hypothetical protein VOLCADRAFT_80470 [Volvox carteri f.
           nagariensis] gi|300265820|gb|EFJ50010.1| hypothetical
           protein VOLCADRAFT_80470 [Volvox carteri f. nagariensis]
          Length = 252

 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 26/35 (74%), Positives = 28/35 (80%), Gaps = 2/35 (5%)
 Frame = -3

Query: 100 EWYGPDRPGFLGPFT--NPPDYLRGEFAGDYGWDT 2
           EWYGPDRP FLGPF+  + P YL GEF GDYGWDT
Sbjct: 33  EWYGPDRPKFLGPFSEGDTPAYLTGEFPGDYGWDT 67


>ref|XP_002951637.1| hypothetical protein VOLCADRAFT_109135 [Volvox carteri f.
           nagariensis] gi|300263246|gb|EFJ47448.1| hypothetical
           protein VOLCADRAFT_109135 [Volvox carteri f.
           nagariensis]
          Length = 251

 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 26/35 (74%), Positives = 28/35 (80%), Gaps = 2/35 (5%)
 Frame = -3

Query: 100 EWYGPDRPGFLGPFT--NPPDYLRGEFAGDYGWDT 2
           EWYGPDRP FLGPF+  + P YL GEF GDYGWDT
Sbjct: 32  EWYGPDRPKFLGPFSEGDTPAYLTGEFPGDYGWDT 66


>ref|XP_002952704.1| light-harvesting chlorophyll a/b-binding protein [Volvox carteri f.
           nagariensis] gi|300262048|gb|EFJ46257.1|
           light-harvesting chlorophyll a/b-binding protein [Volvox
           carteri f. nagariensis]
          Length = 251

 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 26/35 (74%), Positives = 28/35 (80%), Gaps = 2/35 (5%)
 Frame = -3

Query: 100 EWYGPDRPGFLGPFT--NPPDYLRGEFAGDYGWDT 2
           EWYGPDRP FLGPF+  + P YL GEF GDYGWDT
Sbjct: 32  EWYGPDRPKFLGPFSEGDTPAYLTGEFPGDYGWDT 66


>ref|XP_002952626.1| hypothetical protein VOLCADRAFT_81918 [Volvox carteri f.
           nagariensis] gi|300261970|gb|EFJ46179.1| hypothetical
           protein VOLCADRAFT_81918 [Volvox carteri f. nagariensis]
          Length = 251

 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 26/35 (74%), Positives = 28/35 (80%), Gaps = 2/35 (5%)
 Frame = -3

Query: 100 EWYGPDRPGFLGPFT--NPPDYLRGEFAGDYGWDT 2
           EWYGPDRP FLGPF+  + P YL GEF GDYGWDT
Sbjct: 32  EWYGPDRPKFLGPFSEGDTPAYLTGEFPGDYGWDT 66


>gb|ABD37910.1| light-harvesting chlorophyll-a/b binding protein LhcbM2a
           [Chlamydomonas incerta]
          Length = 246

 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 26/35 (74%), Positives = 28/35 (80%), Gaps = 2/35 (5%)
 Frame = -3

Query: 100 EWYGPDRPGFLGPFT--NPPDYLRGEFAGDYGWDT 2
           EWYGPDRP FLGPF+  + P YL GEF GDYGWDT
Sbjct: 28  EWYGPDRPKFLGPFSEGDTPAYLTGEFPGDYGWDT 62


>gb|ABD37911.1| light-harvesting chlorophyll-a/b binding protein LhcbM2b
           [Chlamydomonas incerta]
          Length = 229

 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 26/35 (74%), Positives = 28/35 (80%), Gaps = 2/35 (5%)
 Frame = -3

Query: 100 EWYGPDRPGFLGPFT--NPPDYLRGEFAGDYGWDT 2
           EWYGPDRP FLGPF+  + P YL GEF GDYGWDT
Sbjct: 11  EWYGPDRPKFLGPFSEGDTPAYLTGEFPGDYGWDT 45