BLASTX nr result

ID: Cornus23_contig00017123 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00017123
         (254 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263312.1| PREDICTED: uncharacterized protein LOC100261...    58   3e-06
ref|XP_012852175.1| PREDICTED: splicing factor U2af large subuni...    57   4e-06
ref|XP_012852177.1| PREDICTED: splicing factor U2af large subuni...    57   4e-06

>ref|XP_002263312.1| PREDICTED: uncharacterized protein LOC100261746 [Vitis vinifera]
          Length = 751

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 34/85 (40%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
 Frame = -3

Query: 252 PKSEGVGLSPYSLY-LGHCSHLPKSEALNFTPHVVSSVTDLKGVSDFHSSYEYSNRIQSL 76
           P+++ + L P + Y LG     PKS+ L F P  VSS+ + +G S F   Y  + ++   
Sbjct: 638 PETKRMALPPPATYHLGPFDFFPKSKGLGFPP--VSSILNSQGRSGFEYGY-IATQVPFS 694

Query: 75  NPGSLEKFPGDPDYPSSQSQFYFTT 1
           +P SL +FPGDP YP SQ + YF T
Sbjct: 695 SPSSLLQFPGDPSYPGSQFKSYFAT 719


>ref|XP_012852175.1| PREDICTED: splicing factor U2af large subunit A-like isoform X1
           [Erythranthe guttatus]
          Length = 678

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 35/76 (46%), Positives = 46/76 (60%), Gaps = 2/76 (2%)
 Frame = -3

Query: 225 PYSL-YLGHCSHLPKSEALNFTPHVVSSVTDLKGVSDFHSSYEYSNRIQSLNPGSLEK-F 52
           P SL Y G  SH+ ++EA N +P+VV+S T     ++F S Y++ +RI SL P S    F
Sbjct: 581 PSSLSYCGPDSHIARTEASNISPYVVTSTT-----NNFSSGYDFCDRIPSLLPNSESVIF 635

Query: 51  PGDPDYPSSQSQFYFT 4
           PG PDY  SQ   YFT
Sbjct: 636 PGHPDYIGSQFNSYFT 651


>ref|XP_012852177.1| PREDICTED: splicing factor U2af large subunit A-like isoform X2
           [Erythranthe guttatus] gi|848905416|ref|XP_012852178.1|
           PREDICTED: splicing factor U2af large subunit A-like
           isoform X2 [Erythranthe guttatus]
           gi|604306025|gb|EYU25082.1| hypothetical protein
           MIMGU_mgv1a020680mg [Erythranthe guttata]
          Length = 650

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 35/76 (46%), Positives = 46/76 (60%), Gaps = 2/76 (2%)
 Frame = -3

Query: 225 PYSL-YLGHCSHLPKSEALNFTPHVVSSVTDLKGVSDFHSSYEYSNRIQSLNPGSLEK-F 52
           P SL Y G  SH+ ++EA N +P+VV+S T     ++F S Y++ +RI SL P S    F
Sbjct: 553 PSSLSYCGPDSHIARTEASNISPYVVTSTT-----NNFSSGYDFCDRIPSLLPNSESVIF 607

Query: 51  PGDPDYPSSQSQFYFT 4
           PG PDY  SQ   YFT
Sbjct: 608 PGHPDYIGSQFNSYFT 623


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