BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00017121
         (315 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006343601.1| PREDICTED: pentatricopeptide repeat-containi...    69   1e-09
ref|XP_010273711.1| PREDICTED: pentatricopeptide repeat-containi...    67   5e-09
ref|XP_009608690.1| PREDICTED: pentatricopeptide repeat-containi...    66   9e-09
ref|XP_010323204.1| PREDICTED: pentatricopeptide repeat-containi...    66   1e-08
ref|XP_009792607.1| PREDICTED: pentatricopeptide repeat-containi...    65   3e-08
ref|XP_012837859.1| PREDICTED: pentatricopeptide repeat-containi...    59   2e-06
ref|XP_003634022.1| PREDICTED: pentatricopeptide repeat-containi...    58   2e-06

>ref|XP_006343601.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30825,
           chloroplastic-like isoform X1 [Solanum tuberosum]
           gi|565353364|ref|XP_006343602.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g30825,
           chloroplastic-like isoform X2 [Solanum tuberosum]
          Length = 937

 Score = 69.3 bits (168), Expect = 1e-09
 Identities = 43/104 (41%), Positives = 59/104 (56%), Gaps = 2/104 (1%)
 Frame = +3

Query: 3   IVNHFSKLKHIRVSRLGTELSDNSEPN-QVEDYANCNGSLCESSNM-QNSNFYQEIQKGR 176
           +V+ F  LKHIRVSRL TE  + SE +   E      G L   S + +  N  ++ QKG+
Sbjct: 45  VVSPFCNLKHIRVSRLETEELETSELSLDNEGVDGFEGELGNDSFVTERPNLGRDSQKGK 104

Query: 177 RNIWKRFRGVRKVTGDVNSKTSSRRNDNKHEYEQKPMFVNDGDS 308
            N+WKRFR V+KV  D N ++S R  D K+  E+ PM   D +S
Sbjct: 105 FNVWKRFRRVKKVPRDSNHRSSFRLKDRKNGMEENPMIAFDVNS 148


>ref|XP_010273711.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30825,
           chloroplastic [Nelumbo nucifera]
          Length = 931

 Score = 67.0 bits (162), Expect = 5e-09
 Identities = 39/104 (37%), Positives = 57/104 (54%), Gaps = 1/104 (0%)
 Frame = +3

Query: 6   VNHFSKLKHIRVSRLGTELSDNSEPNQVEDYANCNGSLCESSNMQNSNFYQEIQKGRRNI 185
           VN F +LK +RVSRL TE++D SE +Q +       S  E SN+QN     E++K  R++
Sbjct: 36  VNPFGRLKQVRVSRLATEVADVSELSQADIVVREEASAGEGSNLQNPVLGSEVRKSARSL 95

Query: 186 WKRFRG-VRKVTGDVNSKTSSRRNDNKHEYEQKPMFVNDGDSID 314
           W+RFRG  R+V G   + +       K E E++  F   G+  D
Sbjct: 96  WRRFRGSKREVKGGEVASSECGTRRIKQEQEKRSKFDYKGNGSD 139


>ref|XP_009608690.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30825,
           chloroplastic [Nicotiana tomentosiformis]
          Length = 940

 Score = 66.2 bits (160), Expect = 9e-09
 Identities = 41/103 (39%), Positives = 58/103 (56%), Gaps = 4/103 (3%)
 Frame = +3

Query: 3   IVNHFSKLKHIRVSRLGTELSDNSEPN----QVEDYANCNGSLCESSNMQNSNFYQEIQK 170
           +VN F  LKHIRVSRL TE  + S+ +    +VE++    G+  ES   +  N     QK
Sbjct: 49  VVNPFCSLKHIRVSRLETEDLEISQLSLDGERVENFEGDLGN--ESLVSERLNLGGVSQK 106

Query: 171 GRRNIWKRFRGVRKVTGDVNSKTSSRRNDNKHEYEQKPMFVND 299
           G+ N+WKRFR V++V  D   ++S R  D  H  ++KP  V D
Sbjct: 107 GKFNVWKRFRRVKRVANDSKYRSSFREKDRNHGMQEKPKVVFD 149


>ref|XP_010323204.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30825,
           chloroplastic [Solanum lycopersicum]
          Length = 937

 Score = 65.9 bits (159), Expect = 1e-08
 Identities = 42/104 (40%), Positives = 59/104 (56%), Gaps = 2/104 (1%)
 Frame = +3

Query: 3   IVNHFSKLKHIRVSRLGTELSDNSEPN-QVEDYANCNGSLC-ESSNMQNSNFYQEIQKGR 176
           +V+ F  LKHIRVSRL TE  + SE +   E      G L  ES   +  N  ++ +KG+
Sbjct: 45  VVSPFCNLKHIRVSRLETEELETSELSIDNEGVDGFEGELGNESFVTERPNLGRDSKKGK 104

Query: 177 RNIWKRFRGVRKVTGDVNSKTSSRRNDNKHEYEQKPMFVNDGDS 308
            N+W+RFR V+KV  D N ++S R  D K+  E+ P  V D +S
Sbjct: 105 FNVWRRFRRVKKVPKDSNYRSSFRLKDRKYGTEENPRIVFDVNS 148


>ref|XP_009792607.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30825,
           chloroplastic-like [Nicotiana sylvestris]
          Length = 941

 Score = 64.7 bits (156), Expect = 3e-08
 Identities = 43/107 (40%), Positives = 57/107 (53%), Gaps = 3/107 (2%)
 Frame = +3

Query: 3   IVNHFSKLKHIRVSRLGTELSDNSEPNQV--EDYANCNGSLC-ESSNMQNSNFYQEIQKG 173
           +VN F  LKHIRVSRL TE  + SE + +  E   N  G L  ES   +  N     QKG
Sbjct: 49  VVNPFCNLKHIRVSRLETEELETSELSLLDGERVDNFEGDLGNESLVSERLNLDGVSQKG 108

Query: 174 RRNIWKRFRGVRKVTGDVNSKTSSRRNDNKHEYEQKPMFVNDGDSID 314
           + N+WKRFR V++V  +   ++S R  D  H  ++K   V D  S D
Sbjct: 109 KFNVWKRFRRVKRVANNSKYRSSFREKDRNHGMQEKTKIVFDEISED 155


>ref|XP_012837859.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30825,
           chloroplastic [Erythranthe guttatus]
           gi|604332485|gb|EYU37145.1| hypothetical protein
           MIMGU_mgv1a000931mg [Erythranthe guttata]
          Length = 939

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 33/97 (34%), Positives = 50/97 (51%), Gaps = 4/97 (4%)
 Frame = +3

Query: 3   IVNHFSKLKHIRVSRLGTELSDNSEP----NQVEDYANCNGSLCESSNMQNSNFYQEIQK 170
           IV  F +LKHIRVS+L  E  D S+       +++   C  +  ++  +Q  N   E  +
Sbjct: 48  IVKPFCELKHIRVSKLRDEFLDTSDSILDGYSIDNLEKCVDAADDNLIVQEQNSNGEFDR 107

Query: 171 GRRNIWKRFRGVRKVTGDVNSKTSSRRNDNKHEYEQK 281
            R +IWK FRGV K     N    +RRN +K++  +K
Sbjct: 108 ARIDIWKTFRGVNKARRSANRNLDTRRNGSKYKKGEK 144


>ref|XP_003634022.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30825,
           chloroplastic [Vitis vinifera]
           gi|297745081|emb|CBI38673.3| unnamed protein product
           [Vitis vinifera]
          Length = 900

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 44/107 (41%), Positives = 60/107 (56%), Gaps = 3/107 (2%)
 Frame = +3

Query: 3   IVNHFSKLKHIRVSRLGTELSDNSEPNQVEDYANC--NGSLCESSNMQNSNFYQEIQKGR 176
           I+N F+++K I +SRL  E  D S+ N V D        S  E+  +++SNF       R
Sbjct: 28  IINSFARVKPINISRLEAESWDTSDSNSVVDNIKTWNKDSGSENLILESSNF-------R 80

Query: 177 RNIWKRFRGVRKV-TGDVNSKTSSRRNDNKHEYEQKPMFVNDGDSID 314
            +IW+R +GV++V   D NSK  S RNDN HE EQK +   D D ID
Sbjct: 81  NDIWRRVQGVKRVRRRDPNSKFRSIRNDNGHE-EQKSVNHFD-DEID 125