BLASTX nr result
ID: Cornus23_contig00016978
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cornus23_contig00016978
(530 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010669073.1| PREDICTED: uncharacterized protein LOC104886... 77 5e-12
ref|XP_010675528.1| PREDICTED: uncharacterized protein LOC104891... 77 5e-12
ref|XP_010669074.1| PREDICTED: uncharacterized protein LOC104886... 74 4e-11
ref|XP_010678061.1| PREDICTED: uncharacterized protein LOC104893... 66 1e-08
gb|ABD63142.1| Retrotransposon gag protein [Asparagus officinalis] 64 6e-08
ref|XP_010670092.1| PREDICTED: uncharacterized protein LOC104887... 61 4e-07
ref|XP_010693162.1| PREDICTED: uncharacterized protein LOC104906... 58 2e-06
>ref|XP_010669073.1| PREDICTED: uncharacterized protein LOC104886310, partial [Beta
vulgaris subsp. vulgaris]
Length = 463
Score = 77.0 bits (188), Expect = 5e-12
Identities = 51/166 (30%), Positives = 71/166 (42%), Gaps = 8/166 (4%)
Frame = -1
Query: 524 FRSGWRNHPNFSWKXXXXXXXXXXXXXXNFHQGPKSYGQSFNSNVTSPGHYPNSQGQFND 345
+ GWRNHPNFSWK G GQ N + + P QGQ +
Sbjct: 278 YNPGWRNHPNFSWKQQG---------------GDMQQGQRSNQMGQTGMNPPGFQGQRYN 322
Query: 344 STFRPTXXXXXXXXXXXXXXXXXXXXXXXQVNPSPPRNQNFE--------ALVLAKLKTL 189
S P+ P + N + V ++K +
Sbjct: 323 S------------------------------QPTQPSSSNSDLDKIISALGAVTTRVKNI 352
Query: 188 ESNTQLLHTHSQAIAKLETQVG*LANAMNRRDEGKLPSQPISNPKN 51
E+ ++ +H+Q+IAKLETQ+G LAN + +RD+GKLPS I NPKN
Sbjct: 353 ENKMHVVDSHTQSIAKLETQIGQLANVIGKRDDGKLPSNSIENPKN 398
>ref|XP_010675528.1| PREDICTED: uncharacterized protein LOC104891519 [Beta vulgaris
subsp. vulgaris]
Length = 1865
Score = 77.0 bits (188), Expect = 5e-12
Identities = 51/166 (30%), Positives = 71/166 (42%), Gaps = 8/166 (4%)
Frame = -1
Query: 524 FRSGWRNHPNFSWKXXXXXXXXXXXXXXNFHQGPKSYGQSFNSNVTSPGHYPNSQGQFND 345
+ GWRNHPNFSWK G GQ N + + P QGQ +
Sbjct: 476 YNPGWRNHPNFSWKQQG---------------GDMQQGQRSNQMGQTGMNPPGFQGQRYN 520
Query: 344 STFRPTXXXXXXXXXXXXXXXXXXXXXXXQVNPSPPRNQNFE--------ALVLAKLKTL 189
S P+ P + N + V ++K +
Sbjct: 521 S------------------------------QPTQPSSSNSDLDKIISALGAVTTRVKNI 550
Query: 188 ESNTQLLHTHSQAIAKLETQVG*LANAMNRRDEGKLPSQPISNPKN 51
E+ ++ +H+Q+IAKLETQ+G LAN + +RD+GKLPS I NPKN
Sbjct: 551 ENKMHVVDSHTQSIAKLETQIGQLANVIGKRDDGKLPSNSIENPKN 596
>ref|XP_010669074.1| PREDICTED: uncharacterized protein LOC104886311, partial [Beta
vulgaris subsp. vulgaris]
Length = 463
Score = 73.9 bits (180), Expect = 4e-11
Identities = 50/166 (30%), Positives = 69/166 (41%), Gaps = 8/166 (4%)
Frame = -1
Query: 524 FRSGWRNHPNFSWKXXXXXXXXXXXXXXNFHQGPKSYGQSFNSNVTSPGHYPNSQGQFND 345
+ GWRNHPNFSWK G GQ N + + P QGQ +
Sbjct: 278 YNPGWRNHPNFSWKQQG---------------GDMQQGQRSNQMGQAGMNPPGFQGQRYN 322
Query: 344 STFRPTXXXXXXXXXXXXXXXXXXXXXXXQVNPSPPRNQNFE--------ALVLAKLKTL 189
S P+ P + N + V +K +
Sbjct: 323 S------------------------------QPTQPSSSNSDLDKIISALGAVTTSVKNI 352
Query: 188 ESNTQLLHTHSQAIAKLETQVG*LANAMNRRDEGKLPSQPISNPKN 51
E+ ++ +H+Q+IAKLETQ+G LAN + +RD+GKLPS I NP N
Sbjct: 353 ENKMHVVDSHTQSIAKLETQIGQLANVIGKRDDGKLPSNSIENPTN 398
>ref|XP_010678061.1| PREDICTED: uncharacterized protein LOC104893627 [Beta vulgaris
subsp. vulgaris]
Length = 764
Score = 65.9 bits (159), Expect = 1e-08
Identities = 42/158 (26%), Positives = 67/158 (42%)
Frame = -1
Query: 524 FRSGWRNHPNFSWKXXXXXXXXXXXXXXNFHQGPKSYGQSFNSNVTSPGHYPNSQGQFND 345
+ GWRNHPNFSW+ + G GQ +N S N F
Sbjct: 309 YNPGWRNHPNFSWRQ---------------NSGDVQQGQ--RANPVSQSGMSNISPDFQA 351
Query: 344 STFRPTXXXXXXXXXXXXXXXXXXXXXXXQVNPSPPRNQNFEALVLAKLKTLESNTQLLH 165
+ + QN ++ +++ +E L+
Sbjct: 352 QRYVTPTTQPAQTATQPVNENSNLDKVISALGTLTTTIQNMDS----RIQGIEKKMHLID 407
Query: 164 THSQAIAKLETQVG*LANAMNRRDEGKLPSQPISNPKN 51
+H+ +I+KLE+Q+G LANA+++RD+GKLPS + NPK+
Sbjct: 408 SHTHSISKLESQIGQLANAVSKRDDGKLPSHSVENPKS 445
>gb|ABD63142.1| Retrotransposon gag protein [Asparagus officinalis]
Length = 1788
Score = 63.5 bits (153), Expect = 6e-08
Identities = 46/163 (28%), Positives = 68/163 (41%), Gaps = 5/163 (3%)
Frame = -1
Query: 524 FRSGWRNHPNFSWKXXXXXXXXXXXXXXNFHQGPKSYGQSFN-----SNVTSPGHYPNSQ 360
+ GWRNHPNF+W N Q P+ FN SN P +P+
Sbjct: 241 YNPGWRNHPNFAWNQGNSHGNQNFIPASN-QQFPRGNTVPFNAPNNFSNPPFPNQHPHPH 299
Query: 359 GQFNDSTFRPTXXXXXXXXXXXXXXXXXXXXXXXQVNPSPPRNQNFEALVLAKLKTLESN 180
N S S N +++
Sbjct: 300 QHTNPSNSDHDKRLSVLEKGLEAMIKASTQTTNMLTQSSTTLNS-----------FMQTT 348
Query: 179 TQLLHTHSQAIAKLETQVG*LANAMNRRDEGKLPSQPISNPKN 51
Q+L++++QAIA+LETQ+G LA A++ R++GK PSQP++NPK+
Sbjct: 349 GQVLNSNTQAIARLETQLGQLAAAVSEREKGKFPSQPVANPKD 391
>ref|XP_010670092.1| PREDICTED: uncharacterized protein LOC104887193 [Beta vulgaris
subsp. vulgaris]
Length = 549
Score = 60.8 bits (146), Expect = 4e-07
Identities = 25/54 (46%), Positives = 40/54 (74%)
Frame = -1
Query: 212 VLAKLKTLESNTQLLHTHSQAIAKLETQVG*LANAMNRRDEGKLPSQPISNPKN 51
+ + ++ L++N ++ +H+Q+IAKLETQ+ L N M +RD+GKLPS + NPKN
Sbjct: 315 ITSSIQALKNNMHIVDSHTQSIAKLETQISQLDNTMTKRDDGKLPSNSVENPKN 368
>ref|XP_010693162.1| PREDICTED: uncharacterized protein LOC104906146 [Beta vulgaris
subsp. vulgaris]
Length = 354
Score = 58.2 bits (139), Expect = 2e-06
Identities = 25/50 (50%), Positives = 38/50 (76%)
Frame = -1
Query: 200 LKTLESNTQLLHTHSQAIAKLETQVG*LANAMNRRDEGKLPSQPISNPKN 51
++ LE+ ++ +++ IAKLETQ+G LAN M++RD+GKLPS + NPKN
Sbjct: 49 IQALENKIHIVDSYNYFIAKLETQIGQLANTMSKRDDGKLPSNSVENPKN 98