BLASTX nr result

ID: Cornus23_contig00016847 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00016847
         (777 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011091708.1| PREDICTED: pentatricopeptide repeat-containi...    59   4e-06
ref|XP_011091466.1| PREDICTED: putative pentatricopeptide repeat...    59   5e-06

>ref|XP_011091708.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g63330-like [Sesamum indicum]
          Length = 640

 Score = 58.9 bits (141), Expect = 4e-06
 Identities = 41/116 (35%), Positives = 58/116 (50%), Gaps = 5/116 (4%)
 Frame = -3

Query: 655 PFFSHPVTASIGKKSLMNKPAVIGFNNIDKVEDALNLFHRTVQMRSLPSIVEFNKLIGFI 476
           PFFS     S  K    +    I F++I+ V+DA+ LF   V++R  PS+ +FNKL+  +
Sbjct: 32  PFFSSTFHTSSHKHGPFSSKPRIDFSSINDVDDAVCLFRDMVRLRPQPSVFQFNKLLTVV 91

Query: 475 -----YEILLLLFLRTRKCV*RVMRMPLFMKIIINCYFHLTGFDFEFAILDRSIQR 323
                Y + L LF   R+    V    + M + INCY  L   DF FAIL    +R
Sbjct: 92  VKMKDYSVALSLFDEMRQLGAPVDE--ITMNVAINCYCLLNRVDFGFAILGTFFKR 145


>ref|XP_011091466.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial [Sesamum indicum]
          Length = 606

 Score = 58.5 bits (140), Expect = 5e-06
 Identities = 43/129 (33%), Positives = 63/129 (48%), Gaps = 5/129 (3%)
 Frame = -3

Query: 655 PFFSHPVTASIGKKSLMNKPAVIGFNNIDKVEDALNLFHRTVQMRSLPSIVEFNKLIGFI 476
           PFFS     S  K    +    I F+++++V+DA+ LF   V++R  PS+ +F+KL+  +
Sbjct: 32  PFFSSTFHTSSHKHGPFSSKPRIDFSSVNEVDDAICLFRDMVRLRPQPSVFQFSKLLSVV 91

Query: 475 -----YEILLLLFLRTRKCV*RVMRMPLFMKIIINCYFHLTGFDFEFAILDRSIQRWFMN 311
                Y + L LF   R+    V    + M I INCY  L   +F FAIL    +R    
Sbjct: 92  VKMKHYSVALSLFDEMRQLGAPVNE--ITMNIAINCYCLLNRVNFGFAILGTFFKRGCEP 149

Query: 310 YVEMISTKI 284
            V   ST I
Sbjct: 150 NVTAFSTLI 158


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