BLASTX nr result

ID: Cornus23_contig00016685 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00016685
         (569 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010663484.1| PREDICTED: F-box protein At5g49610-like [Vit...    64   4e-08
emb|CAN77786.1| hypothetical protein VITISV_023232 [Vitis vinifera]    64   4e-08

>ref|XP_010663484.1| PREDICTED: F-box protein At5g49610-like [Vitis vinifera]
           gi|731426091|ref|XP_010663485.1| PREDICTED: F-box
           protein At5g49610-like [Vitis vinifera]
          Length = 377

 Score = 64.3 bits (155), Expect = 4e-08
 Identities = 46/159 (28%), Positives = 77/159 (48%), Gaps = 7/159 (4%)
 Frame = -3

Query: 552 LDRRF-------VLSCDLTSEKFWFWLFSPSIKSPEFKPDFPACNLQLQIIGGSVALLEY 394
           LD++F       +L+ DL  EKF      P+I+ P   P     +L L  + G + ++  
Sbjct: 216 LDKKFHYDGDGCILAFDLREEKFGMIALPPNIRMPTGNPGLYNGSLHLLNVAGCLTVIAD 275

Query: 393 DGRLLNIWRWRRHQQDGHFYFAFKSVNMEVPWNASCLRSLVYMPRPNKMYLEIDGLNLGD 214
           + + L+IW+  R++  G F   ++  +M   W+      L+   + +   L +     G 
Sbjct: 276 ECQFLHIWQVMRNRDRG-FSVRYRRSDMHCRWSVFSQPVLLDWCKDS---LLLSVSKFGV 331

Query: 213 YYENNLVDYIPKSKFYNKLVIPGIPKSFRATSFNPSFIS 97
           Y E +LV+Y P+ K Y    I G+PK FR+ SF P+ IS
Sbjct: 332 YSERDLVEYFPERKQYAGHHIRGLPKWFRSCSFKPNLIS 370


>emb|CAN77786.1| hypothetical protein VITISV_023232 [Vitis vinifera]
          Length = 377

 Score = 64.3 bits (155), Expect = 4e-08
 Identities = 46/159 (28%), Positives = 77/159 (48%), Gaps = 7/159 (4%)
 Frame = -3

Query: 552 LDRRF-------VLSCDLTSEKFWFWLFSPSIKSPEFKPDFPACNLQLQIIGGSVALLEY 394
           LD++F       +L+ DL  EKF      P+I+ P   P     +L L  + G + ++  
Sbjct: 216 LDKKFHYDGDGCILAFDLREEKFGMIALPPNIRMPTGNPGLYNGSLHLLNVAGCLTVIAD 275

Query: 393 DGRLLNIWRWRRHQQDGHFYFAFKSVNMEVPWNASCLRSLVYMPRPNKMYLEIDGLNLGD 214
           + + L+IW+  R++  G F   ++  +M   W+      L+   + +   L +     G 
Sbjct: 276 ECQFLHIWQVMRNRDRG-FSVRYRRSDMHCRWSVFSQPVLLDWCKDS---LLLSVSKFGV 331

Query: 213 YYENNLVDYIPKSKFYNKLVIPGIPKSFRATSFNPSFIS 97
           Y E +LV+Y P+ K Y    I G+PK FR+ SF P+ IS
Sbjct: 332 YSERDLVEYFPERKQYAGHHIRGLPKWFRSCSFKPNLIS 370


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