BLASTX nr result

ID: Cornus23_contig00016577 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00016577
         (390 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011027731.1| PREDICTED: glutamate receptor 2.9-like isofo...    59   2e-06
ref|XP_011027730.1| PREDICTED: glutamate receptor 2.9-like isofo...    59   2e-06
ref|XP_002305094.2| hypothetical protein POPTR_0004s05170g [Popu...    58   3e-06

>ref|XP_011027731.1| PREDICTED: glutamate receptor 2.9-like isoform X2 [Populus
            euphratica]
          Length = 942

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 41/105 (39%), Positives = 52/105 (49%), Gaps = 3/105 (2%)
 Frame = -1

Query: 390  ICFLFFLVRLYINYGRNEGN---TSTQSDNRVSSMTVEHVQGFDNEGGTRSLERAPTFAQ 220
            ICFL FL RL  NY   +      +T SD  V   TV   + +   G T     +P  A 
Sbjct: 837  ICFLLFLFRLLKNYHHQQDGDRGNATPSDKSVWEKTVTLAR-YIYHGETVIPGGSPISAP 895

Query: 219  TPDVDEWSSLRRDLASPSRSTTERAMISPPAEIEITADPNVNEGE 85
            +PDV EW+S RR+  SP   T E    SPPAEIE+   P+ +  E
Sbjct: 896  SPDVYEWNSSRREFTSPG-DTPENLQPSPPAEIEVVNIPDFDAKE 939


>ref|XP_011027730.1| PREDICTED: glutamate receptor 2.9-like isoform X1 [Populus
            euphratica]
          Length = 945

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 41/105 (39%), Positives = 52/105 (49%), Gaps = 3/105 (2%)
 Frame = -1

Query: 390  ICFLFFLVRLYINYGRNEGN---TSTQSDNRVSSMTVEHVQGFDNEGGTRSLERAPTFAQ 220
            ICFL FL RL  NY   +      +T SD  V   TV   + +   G T     +P  A 
Sbjct: 840  ICFLLFLFRLLKNYHHQQDGDRGNATPSDKSVWEKTVTLAR-YIYHGETVIPGGSPISAP 898

Query: 219  TPDVDEWSSLRRDLASPSRSTTERAMISPPAEIEITADPNVNEGE 85
            +PDV EW+S RR+  SP   T E    SPPAEIE+   P+ +  E
Sbjct: 899  SPDVYEWNSSRREFTSPG-DTPENLQPSPPAEIEVVNIPDFDAKE 942


>ref|XP_002305094.2| hypothetical protein POPTR_0004s05170g [Populus trichocarpa]
           gi|550340368|gb|EEE85605.2| hypothetical protein
           POPTR_0004s05170g [Populus trichocarpa]
          Length = 784

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 41/108 (37%), Positives = 53/108 (49%), Gaps = 3/108 (2%)
 Frame = -1

Query: 390 ICFLFFLVRLYINYGRNEGN---TSTQSDNRVSSMTVEHVQGFDNEGGTRSLERAPTFAQ 220
           IC L FL RL  NY   +      +T SD  V   TV   + +   G T     +P  A 
Sbjct: 679 ICLLLFLFRLLKNYHHQQDEDRGNATPSDKSVWGKTVTLAR-YIYHGETVIPGGSPISAP 737

Query: 219 TPDVDEWSSLRRDLASPSRSTTERAMISPPAEIEITADPNVNEGEYRN 76
           +PDV EW+S RR+ +SP   T E    SPPAEIE+   P+ +  E  N
Sbjct: 738 SPDVYEWNSSRREFSSP-EDTPENLQPSPPAEIEVVNIPDFDTKENSN 784


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