BLASTX nr result

ID: Cornus23_contig00016384 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00016384
         (389 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007035645.1| Subunit H2, putative [Theobroma cacao] gi|50...    60   6e-07
gb|KHN26533.1| Condensin-2 complex subunit H2 [Glycine soja]           58   2e-06
ref|XP_003534838.1| PREDICTED: condensin-2 complex subunit H2-li...    58   2e-06
gb|KHN20780.1| Condensin-2 complex subunit H2 [Glycine soja]           58   3e-06
ref|XP_003547386.1| PREDICTED: condensin-2 complex subunit H2-li...    58   3e-06
ref|XP_014499062.1| PREDICTED: condensin-2 complex subunit H2 is...    56   9e-06

>ref|XP_007035645.1| Subunit H2, putative [Theobroma cacao] gi|508714674|gb|EOY06571.1|
           Subunit H2, putative [Theobroma cacao]
          Length = 684

 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 27/49 (55%), Positives = 35/49 (71%)
 Frame = -1

Query: 263 SESRQ*DQPEDASVQPQEDGSNAVTDEENDLFWGLDDIPEH*KVSVQKS 117
           S+ RQ DQPE ASV+P++  S A +DE+ND FWGLDDIP   K+ +  S
Sbjct: 98  SQKRQHDQPEGASVEPEQGASKASSDEDNDQFWGLDDIPVEAKICLDSS 146


>gb|KHN26533.1| Condensin-2 complex subunit H2 [Glycine soja]
          Length = 673

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 30/57 (52%), Positives = 36/57 (63%)
 Frame = -1

Query: 296 YKSLTRSSGASSESRQ*DQPEDASVQPQEDGSNAVTDEENDLFWGLDDIPEH*KVSV 126
           Y  + R+    S+ R  D  + ASVQP+E G  AVTDEEND FWGLDDIP   K S+
Sbjct: 83  YTLVLRALEFLSQKRNQDHIDGASVQPEESGPRAVTDEENDQFWGLDDIPVEEKNSL 139


>ref|XP_003534838.1| PREDICTED: condensin-2 complex subunit H2-like [Glycine max]
           gi|947088404|gb|KRH37069.1| hypothetical protein
           GLYMA_09G042300 [Glycine max]
          Length = 673

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 30/57 (52%), Positives = 36/57 (63%)
 Frame = -1

Query: 296 YKSLTRSSGASSESRQ*DQPEDASVQPQEDGSNAVTDEENDLFWGLDDIPEH*KVSV 126
           Y  + R+    S+ R  D  + ASVQP+E G  AVTDEEND FWGLDDIP   K S+
Sbjct: 83  YTLVLRALEFLSQKRNQDHIDGASVQPEESGPRAVTDEENDQFWGLDDIPVEEKNSL 139


>gb|KHN20780.1| Condensin-2 complex subunit H2 [Glycine soja]
          Length = 674

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 30/57 (52%), Positives = 36/57 (63%)
 Frame = -1

Query: 296 YKSLTRSSGASSESRQ*DQPEDASVQPQEDGSNAVTDEENDLFWGLDDIPEH*KVSV 126
           Y  + R+    S+ RQ D  +  SVQP+E G  AVTDEEND FWGLDDIP   K S+
Sbjct: 83  YTLVLRALEFLSQKRQQDHKDGPSVQPEESGPCAVTDEENDQFWGLDDIPVEEKNSL 139


>ref|XP_003547386.1| PREDICTED: condensin-2 complex subunit H2-like [Glycine max]
           gi|947062822|gb|KRH12083.1| hypothetical protein
           GLYMA_15G150700 [Glycine max]
          Length = 674

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 30/57 (52%), Positives = 36/57 (63%)
 Frame = -1

Query: 296 YKSLTRSSGASSESRQ*DQPEDASVQPQEDGSNAVTDEENDLFWGLDDIPEH*KVSV 126
           Y  + R+    S+ RQ D  +  SVQP+E G  AVTDEEND FWGLDDIP   K S+
Sbjct: 83  YTLVLRALEFLSQKRQQDHKDGPSVQPEESGPCAVTDEENDQFWGLDDIPVEEKNSL 139


>ref|XP_014499062.1| PREDICTED: condensin-2 complex subunit H2 isoform X1 [Vigna radiata
           var. radiata] gi|950966293|ref|XP_014499063.1|
           PREDICTED: condensin-2 complex subunit H2 isoform X1
           [Vigna radiata var. radiata]
          Length = 693

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 35/85 (41%), Positives = 45/85 (52%)
 Frame = -1

Query: 296 YKSLTRSSGASSESRQ*DQPEDASVQPQEDGSNAVTDEENDLFWGLDDIPEH*KVSVQKS 117
           Y  + R+    S+ RQ D  +  SVQP+E GS AV+DEEND FWGLDDI    K S+  +
Sbjct: 83  YTLVLRALEFLSQKRQQDHEDGESVQPEEMGSRAVSDEENDQFWGLDDIQVEEKNSLDGT 142

Query: 116 LSL*IGDPL*IS*QPTHARALESQC 42
               +   L I   P +   LE  C
Sbjct: 143 TGKEVNLDLFIK-PPANLVVLEGDC 166


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