BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00016130
         (458 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006465105.1| PREDICTED: DNA topoisomerase 3-alpha-like [C...   183   5e-44
ref|XP_010649355.1| PREDICTED: DNA topoisomerase 3-alpha isoform...   177   4e-42
ref|XP_010649354.1| PREDICTED: DNA topoisomerase 3-alpha isoform...   177   4e-42
ref|XP_010649353.1| PREDICTED: DNA topoisomerase 3-alpha isoform...   177   4e-42
emb|CBI37517.3| unnamed protein product [Vitis vinifera]              177   4e-42
ref|XP_007048480.1| Topoisomerase 3alpha isoform 1 [Theobroma ca...   172   9e-41
ref|XP_012081965.1| PREDICTED: DNA topoisomerase 3-alpha isoform...   171   2e-40
ref|XP_009355843.1| PREDICTED: DNA topoisomerase 3-alpha [Pyrus ...   169   7e-40
ref|XP_008227548.1| PREDICTED: DNA topoisomerase 3-alpha [Prunus...   169   7e-40
ref|XP_002307047.1| hypothetical protein POPTR_0005s06810g [Popu...   169   7e-40
ref|XP_008394176.1| PREDICTED: DNA-binding protein HEXBP-like [M...   168   2e-39
ref|XP_007214290.1| hypothetical protein PRUPE_ppb010436mg [Prun...   167   3e-39
ref|XP_012489370.1| PREDICTED: DNA topoisomerase 3-alpha isoform...   167   4e-39
ref|XP_012489368.1| PREDICTED: DNA topoisomerase 3-alpha isoform...   167   4e-39
ref|XP_012489371.1| PREDICTED: DNA topoisomerase 3-alpha isoform...   167   4e-39
ref|XP_012489369.1| PREDICTED: DNA topoisomerase 3-alpha isoform...   167   4e-39
gb|KHG06666.1| DNA topoisomerase 3-alpha [Gossypium arboreum]         167   4e-39
ref|XP_011011407.1| PREDICTED: DNA topoisomerase 3-alpha-like is...   166   6e-39
ref|XP_011031138.1| PREDICTED: DNA topoisomerase 3-alpha isoform...   166   6e-39
ref|XP_006341743.1| PREDICTED: DNA topoisomerase 3-alpha-like [S...   165   1e-38

>ref|XP_006465105.1| PREDICTED: DNA topoisomerase 3-alpha-like [Citrus sinensis]
          Length = 940

 Score =  183 bits (464), Expect = 5e-44
 Identities = 92/152 (60%), Positives = 106/152 (69%)
 Frame = -1

Query: 458  ARGRGRTTSSTSAQRSNSRQSACTQCHQLGHSSNDCPSQASHFRSSWSQEMNPQTGESSI 279
            ARGRG T SS + Q+SN RQ AC  C Q+GHSS+DCPSQ S  R++ +  MNPQ+GESSI
Sbjct: 769  ARGRGPTASSNNGQQSNHRQRACIYCQQMGHSSSDCPSQFSGSRNARANGMNPQSGESSI 828

Query: 278  RCNTCGAPCVSRTANTANNRGRKFYSCQSQECNFFVWQDNINSNGGRSAPRANISSSASN 99
            +C TCG PCV RTANTANNRGRKFYSC SQECNFFVW+D+   NG R  P+A +S SASN
Sbjct: 829  QCTTCGTPCVLRTANTANNRGRKFYSCSSQECNFFVWEDDA-KNGTRRMPQAGVSGSASN 887

Query: 98   LIXXXXXXXXXXXXXXXXGMTFVSATGDSVSG 3
                              GMTFVSATGD +SG
Sbjct: 888  PSQRGGRGRGGQSRGHNTGMTFVSATGDPISG 919


>ref|XP_010649355.1| PREDICTED: DNA topoisomerase 3-alpha isoform X3 [Vitis vinifera]
          Length = 916

 Score =  177 bits (448), Expect = 4e-42
 Identities = 93/158 (58%), Positives = 104/158 (65%), Gaps = 6/158 (3%)
 Frame = -1

Query: 458  ARGRGRTTSSTSAQRSNSRQSACTQCHQLGHSSNDCPSQASHFRSSWSQEMNPQTGESSI 279
            ARGRG   SST+AQRSN+RQ+AC  C Q GHSSNDCPS+    R+S S   N  +GESSI
Sbjct: 738  ARGRGSNASSTNAQRSNTRQTACIHCSQTGHSSNDCPSRVPRSRNSQSHRTNMPSGESSI 797

Query: 278  RCNTCGAPCVSRTANTANNRGRKFYSCQSQECNFFVWQDNIN-SNGGRSAPRANISSSAS 102
             CN CG PC+ RTANT NNRGRKFYSCQSQECNFFVW+D++N S+GGRSA  A   SSAS
Sbjct: 798  PCNVCGTPCILRTANTENNRGRKFYSCQSQECNFFVWEDSLNSSSGGRSAQPATARSSAS 857

Query: 101  NLI-----XXXXXXXXXXXXXXXXGMTFVSATGDSVSG 3
            N                         TFVSATGD VSG
Sbjct: 858  NPSRRGGRGRGDRGRGRQSGARTSDTTFVSATGDPVSG 895


>ref|XP_010649354.1| PREDICTED: DNA topoisomerase 3-alpha isoform X2 [Vitis vinifera]
          Length = 918

 Score =  177 bits (448), Expect = 4e-42
 Identities = 93/158 (58%), Positives = 104/158 (65%), Gaps = 6/158 (3%)
 Frame = -1

Query: 458  ARGRGRTTSSTSAQRSNSRQSACTQCHQLGHSSNDCPSQASHFRSSWSQEMNPQTGESSI 279
            ARGRG   SST+AQRSN+RQ+AC  C Q GHSSNDCPS+    R+S S   N  +GESSI
Sbjct: 740  ARGRGSNASSTNAQRSNTRQTACIHCSQTGHSSNDCPSRVPRSRNSQSHRTNMPSGESSI 799

Query: 278  RCNTCGAPCVSRTANTANNRGRKFYSCQSQECNFFVWQDNIN-SNGGRSAPRANISSSAS 102
             CN CG PC+ RTANT NNRGRKFYSCQSQECNFFVW+D++N S+GGRSA  A   SSAS
Sbjct: 800  PCNVCGTPCILRTANTENNRGRKFYSCQSQECNFFVWEDSLNSSSGGRSAQPATARSSAS 859

Query: 101  NLI-----XXXXXXXXXXXXXXXXGMTFVSATGDSVSG 3
            N                         TFVSATGD VSG
Sbjct: 860  NPSRRGGRGRGDRGRGRQSGARTSDTTFVSATGDPVSG 897


>ref|XP_010649353.1| PREDICTED: DNA topoisomerase 3-alpha isoform X1 [Vitis vinifera]
          Length = 919

 Score =  177 bits (448), Expect = 4e-42
 Identities = 93/158 (58%), Positives = 104/158 (65%), Gaps = 6/158 (3%)
 Frame = -1

Query: 458  ARGRGRTTSSTSAQRSNSRQSACTQCHQLGHSSNDCPSQASHFRSSWSQEMNPQTGESSI 279
            ARGRG   SST+AQRSN+RQ+AC  C Q GHSSNDCPS+    R+S S   N  +GESSI
Sbjct: 741  ARGRGSNASSTNAQRSNTRQTACIHCSQTGHSSNDCPSRVPRSRNSQSHRTNMPSGESSI 800

Query: 278  RCNTCGAPCVSRTANTANNRGRKFYSCQSQECNFFVWQDNIN-SNGGRSAPRANISSSAS 102
             CN CG PC+ RTANT NNRGRKFYSCQSQECNFFVW+D++N S+GGRSA  A   SSAS
Sbjct: 801  PCNVCGTPCILRTANTENNRGRKFYSCQSQECNFFVWEDSLNSSSGGRSAQPATARSSAS 860

Query: 101  NLI-----XXXXXXXXXXXXXXXXGMTFVSATGDSVSG 3
            N                         TFVSATGD VSG
Sbjct: 861  NPSRRGGRGRGDRGRGRQSGARTSDTTFVSATGDPVSG 898


>emb|CBI37517.3| unnamed protein product [Vitis vinifera]
          Length = 589

 Score =  177 bits (448), Expect = 4e-42
 Identities = 93/158 (58%), Positives = 104/158 (65%), Gaps = 6/158 (3%)
 Frame = -1

Query: 458 ARGRGRTTSSTSAQRSNSRQSACTQCHQLGHSSNDCPSQASHFRSSWSQEMNPQTGESSI 279
           ARGRG   SST+AQRSN+RQ+AC  C Q GHSSNDCPS+    R+S S   N  +GESSI
Sbjct: 411 ARGRGSNASSTNAQRSNTRQTACIHCSQTGHSSNDCPSRVPRSRNSQSHRTNMPSGESSI 470

Query: 278 RCNTCGAPCVSRTANTANNRGRKFYSCQSQECNFFVWQDNIN-SNGGRSAPRANISSSAS 102
            CN CG PC+ RTANT NNRGRKFYSCQSQECNFFVW+D++N S+GGRSA  A   SSAS
Sbjct: 471 PCNVCGTPCILRTANTENNRGRKFYSCQSQECNFFVWEDSLNSSSGGRSAQPATARSSAS 530

Query: 101 NLI-----XXXXXXXXXXXXXXXXGMTFVSATGDSVSG 3
           N                         TFVSATGD VSG
Sbjct: 531 NPSRRGGRGRGDRGRGRQSGARTSDTTFVSATGDPVSG 568


>ref|XP_007048480.1| Topoisomerase 3alpha isoform 1 [Theobroma cacao]
            gi|508700741|gb|EOX92637.1| Topoisomerase 3alpha isoform
            1 [Theobroma cacao]
          Length = 914

 Score =  172 bits (436), Expect = 9e-41
 Identities = 90/155 (58%), Positives = 106/155 (68%), Gaps = 3/155 (1%)
 Frame = -1

Query: 458  ARGRGRTTSSTSAQRSNSRQSACTQCHQLGHSSNDCPSQASHFRSSWSQEMNPQTGESSI 279
            ARGRG TT+S++ QR++SRQ AC  C Q GHSSNDCPSQ S  R+S S+  + Q GE S+
Sbjct: 740  ARGRGPTTTSSNVQRNSSRQGACLYCQQTGHSSNDCPSQFSGSRNSRSRTSS-QNGEPSV 798

Query: 278  RCNTCGAPCVSRTANTANNRGRKFYSCQSQECNFFVWQD-NINSNGGRSAPRANISSSAS 102
             C+TCG PCV RTANTANNRGRKFYSC SQECNFF+W+D + N  GGRS PRA I+ SAS
Sbjct: 799  SCSTCGTPCVLRTANTANNRGRKFYSCPSQECNFFIWEDEHNNGTGGRSIPRAGINGSAS 858

Query: 101  NLI--XXXXXXXXXXXXXXXXGMTFVSATGDSVSG 3
            N                     +TFVSATGD +SG
Sbjct: 859  NSSRGGGRGRGRFGQNGARAADVTFVSATGDPISG 893


>ref|XP_012081965.1| PREDICTED: DNA topoisomerase 3-alpha isoform X1 [Jatropha curcas]
            gi|802678385|ref|XP_012081966.1| PREDICTED: DNA
            topoisomerase 3-alpha isoform X1 [Jatropha curcas]
          Length = 912

 Score =  171 bits (433), Expect = 2e-40
 Identities = 82/153 (53%), Positives = 103/153 (67%), Gaps = 1/153 (0%)
 Frame = -1

Query: 458  ARGRGRTTSSTSAQRSNSRQSACTQCHQLGHSSNDCPSQASHFRSSWSQEMNPQTGESSI 279
            ARGR   T+S++ Q+SN+R   CT C Q+GH S+DCPS+ S  R + S+ MN QTGESS+
Sbjct: 739  ARGRAPNTTSSNLQQSNTRHGTCTHCQQIGHISSDCPSRLSASRQAQSRGMNQQTGESSV 798

Query: 278  RCNTCGAPCVSRTANTANNRGRKFYSCQSQECNFFVWQDNINSNGG-RSAPRANISSSAS 102
             C TCG PC+ RTANTANNRGRKFYSC SQ CNFFVW+DN+N+    R+AP  ++ +SAS
Sbjct: 799  SCGTCGTPCLLRTANTANNRGRKFYSCSSQGCNFFVWEDNLNNGSNRRNAPHGSMDNSAS 858

Query: 101  NLIXXXXXXXXXXXXXXXXGMTFVSATGDSVSG 3
            N                   +TFVSATGD +SG
Sbjct: 859  NPSRRSGRGRGVQSGGRGADVTFVSATGDPISG 891


>ref|XP_009355843.1| PREDICTED: DNA topoisomerase 3-alpha [Pyrus x bretschneideri]
          Length = 972

 Score =  169 bits (428), Expect = 7e-40
 Identities = 87/153 (56%), Positives = 106/153 (69%), Gaps = 1/153 (0%)
 Frame = -1

Query: 458  ARGRGRTTSSTSAQRSNSRQSACTQCHQLGHSSNDCPSQASHFRSSWSQEMNPQTGESSI 279
            ARGRG   S+ + Q+SN+RQ AC  CHQ GHSS DCPSQ+S  +S+  + MN Q+G+ S 
Sbjct: 800  ARGRGPAMSN-NVQQSNTRQGACIYCHQTGHSSGDCPSQSSGPQSARPRPMNVQSGQVST 858

Query: 278  RCNTCGAPCVSRTANTANNRGRKFYSCQSQECNFFVWQDNINS-NGGRSAPRANISSSAS 102
             C+TCGAPC  RTANT  NRGRKFYSCQSQ CNFFVW+D++N+ NGGR   RAN+S+SAS
Sbjct: 859  SCSTCGAPCALRTANTTANRGRKFYSCQSQACNFFVWEDSLNNDNGGRGFQRANVSASAS 918

Query: 101  NLIXXXXXXXXXXXXXXXXGMTFVSATGDSVSG 3
            N                  G++FVSATGD VSG
Sbjct: 919  NPTRSGGNGRGGRGAGDAAGVSFVSATGDPVSG 951


>ref|XP_008227548.1| PREDICTED: DNA topoisomerase 3-alpha [Prunus mume]
          Length = 910

 Score =  169 bits (428), Expect = 7e-40
 Identities = 87/153 (56%), Positives = 101/153 (66%), Gaps = 1/153 (0%)
 Frame = -1

Query: 458  ARGRGRTTSSTSAQRSNSRQSACTQCHQLGHSSNDCPSQASHFRSSWSQEMNPQTGESSI 279
            ARGRG      + QRSN+RQ AC  CHQ GHSS +CPSQ+S  RSS  Q MN Q+G+ SI
Sbjct: 737  ARGRGGPAMPNNVQRSNTRQGACIYCHQTGHSSGNCPSQSSGPRSSRPQSMNVQSGQVSI 796

Query: 278  RCNTCGAPCVSRTANTANNRGRKFYSCQSQECNFFVWQDNINS-NGGRSAPRANISSSAS 102
             C+ CGA C  RTANT  NRGRKFYSCQSQ CNFFVW+D+IN+ N GR   R N+S+SAS
Sbjct: 797  SCSACGALCALRTANTTTNRGRKFYSCQSQACNFFVWEDSINNGNRGRGFQRVNVSASAS 856

Query: 101  NLIXXXXXXXXXXXXXXXXGMTFVSATGDSVSG 3
            N                  G+TFVSATGD +SG
Sbjct: 857  NPSRSQGHGRGGRGAVDAAGVTFVSATGDPISG 889


>ref|XP_002307047.1| hypothetical protein POPTR_0005s06810g [Populus trichocarpa]
            gi|222856496|gb|EEE94043.1| hypothetical protein
            POPTR_0005s06810g [Populus trichocarpa]
          Length = 910

 Score =  169 bits (428), Expect = 7e-40
 Identities = 84/147 (57%), Positives = 100/147 (68%), Gaps = 1/147 (0%)
 Frame = -1

Query: 440  TTSSTSAQRSNSRQSACTQCHQLGHSSNDCPSQASHFRSSWSQEMNPQTGESSIRCNTCG 261
            TT+ ++ QRSNSRQ+ C  C+Q GH+S DCPS+ S  R   S  MN Q GESSI C+TCG
Sbjct: 743  TTTPSNPQRSNSRQAPCIYCYQTGHASTDCPSRISATRHVQSHGMNQQNGESSIPCSTCG 802

Query: 260  APCVSRTANTANNRGRKFYSCQSQECNFFVWQDNINSNGG-RSAPRANISSSASNLIXXX 84
             PCV RTANTANNRGRKFYSC SQ CNFFVW+DN+N+    RSAPR N+S+SASN     
Sbjct: 803  TPCVLRTANTANNRGRKFYSCSSQACNFFVWEDNLNNGSAPRSAPRPNMSNSASNPSRRG 862

Query: 83   XXXXXXXXXXXXXGMTFVSATGDSVSG 3
                          +TFVSATG+ +SG
Sbjct: 863  GRGRGVQNAGRAADVTFVSATGEPISG 889


>ref|XP_008394176.1| PREDICTED: DNA-binding protein HEXBP-like [Malus domestica]
          Length = 166

 Score =  168 bits (425), Expect = 2e-39
 Identities = 84/144 (58%), Positives = 101/144 (70%), Gaps = 1/144 (0%)
 Frame = -1

Query: 431 STSAQRSNSRQSACTQCHQLGHSSNDCPSQASHFRSSWSQEMNPQTGESSIRCNTCGAPC 252
           S + QRSN+RQ AC  CHQ GHSS DCPSQ+S  +S+  + MN Q+G+ SI C+TCGAPC
Sbjct: 2   SNNVQRSNTRQGACIYCHQTGHSSGDCPSQSSGPQSARPRPMNVQSGQVSISCSTCGAPC 61

Query: 251 VSRTANTANNRGRKFYSCQSQECNFFVWQDNINS-NGGRSAPRANISSSASNLIXXXXXX 75
             RTANT  NRGRKFYSCQSQ CNFFVW+D++N+ NGGR   RAN+S+SASN        
Sbjct: 62  ALRTANTTANRGRKFYSCQSQACNFFVWEDSLNNDNGGRGFQRANVSASASNPTRNGGSG 121

Query: 74  XXXXXXXXXXGMTFVSATGDSVSG 3
                     G++FVSATGD VSG
Sbjct: 122 RGGRGAGDAAGVSFVSATGDPVSG 145


>ref|XP_007214290.1| hypothetical protein PRUPE_ppb010436mg [Prunus persica]
           gi|462410155|gb|EMJ15489.1| hypothetical protein
           PRUPE_ppb010436mg [Prunus persica]
          Length = 166

 Score =  167 bits (423), Expect = 3e-39
 Identities = 84/142 (59%), Positives = 98/142 (69%), Gaps = 1/142 (0%)
 Frame = -1

Query: 425 SAQRSNSRQSACTQCHQLGHSSNDCPSQASHFRSSWSQEMNPQTGESSIRCNTCGAPCVS 246
           + QRSN+RQ AC  CHQ GHSS +CPSQ+S  RSS  Q MN Q+G+ SI C+ CGAPC S
Sbjct: 4   NVQRSNTRQGACIYCHQTGHSSGNCPSQSSGPRSSRPQSMNVQSGQVSISCSACGAPCTS 63

Query: 245 RTANTANNRGRKFYSCQSQECNFFVWQDNINS-NGGRSAPRANISSSASNLIXXXXXXXX 69
           RTANT  NRGRKFYSCQSQ CNFFVW+D+IN+ N GR   R N+S+SASN          
Sbjct: 64  RTANTTTNRGRKFYSCQSQACNFFVWEDSINNGNRGRGFQRVNVSASASNPSRSQGHGRG 123

Query: 68  XXXXXXXXGMTFVSATGDSVSG 3
                   G+TFVSATGD +SG
Sbjct: 124 GRGAVDAAGVTFVSATGDPISG 145


>ref|XP_012489370.1| PREDICTED: DNA topoisomerase 3-alpha isoform X3 [Gossypium raimondii]
          Length = 917

 Score =  167 bits (422), Expect = 4e-39
 Identities = 86/152 (56%), Positives = 101/152 (66%), Gaps = 1/152 (0%)
 Frame = -1

Query: 458  ARGRGRTTSSTSAQRSNSRQSACTQCHQLGHSSNDCPSQASHFRSSWSQEMNPQTGESSI 279
            ARGRG TT+S++ QRS++R ++C  C Q GHSSNDCPSQ S  R+S S   N + G+ S+
Sbjct: 748  ARGRGPTTTSSNGQRSSNRHNSCIHCQQTGHSSNDCPSQFSRSRNSQSHT-NSENGDPSV 806

Query: 278  RCNTCGAPCVSRTANTANNRGRKFYSCQSQECNFFVWQDNI-NSNGGRSAPRANISSSAS 102
             C+TCG PCV RTANTANNRGRKFYSC SQECNFF+W+D + N NGGRS P  N   SAS
Sbjct: 807  SCSTCGMPCVLRTANTANNRGRKFYSCPSQECNFFIWEDGVSNGNGGRSIPSTN--CSAS 864

Query: 101  NLIXXXXXXXXXXXXXXXXGMTFVSATGDSVS 6
            N                    TFVSATGD VS
Sbjct: 865  NSGRRGGRGQSGRNRSHAADTTFVSATGDPVS 896


>ref|XP_012489368.1| PREDICTED: DNA topoisomerase 3-alpha isoform X1 [Gossypium raimondii]
          Length = 936

 Score =  167 bits (422), Expect = 4e-39
 Identities = 86/152 (56%), Positives = 101/152 (66%), Gaps = 1/152 (0%)
 Frame = -1

Query: 458  ARGRGRTTSSTSAQRSNSRQSACTQCHQLGHSSNDCPSQASHFRSSWSQEMNPQTGESSI 279
            ARGRG TT+S++ QRS++R ++C  C Q GHSSNDCPSQ S  R+S S   N + G+ S+
Sbjct: 767  ARGRGPTTTSSNGQRSSNRHNSCIHCQQTGHSSNDCPSQFSRSRNSQSHT-NSENGDPSV 825

Query: 278  RCNTCGAPCVSRTANTANNRGRKFYSCQSQECNFFVWQDNI-NSNGGRSAPRANISSSAS 102
             C+TCG PCV RTANTANNRGRKFYSC SQECNFF+W+D + N NGGRS P  N   SAS
Sbjct: 826  SCSTCGMPCVLRTANTANNRGRKFYSCPSQECNFFIWEDGVSNGNGGRSIPSTN--CSAS 883

Query: 101  NLIXXXXXXXXXXXXXXXXGMTFVSATGDSVS 6
            N                    TFVSATGD VS
Sbjct: 884  NSGRRGGRGQSGRNRSHAADTTFVSATGDPVS 915


>ref|XP_012489371.1| PREDICTED: DNA topoisomerase 3-alpha isoform X4 [Gossypium raimondii]
            gi|763773368|gb|KJB40491.1| hypothetical protein
            B456_007G066700 [Gossypium raimondii]
            gi|763773370|gb|KJB40493.1| hypothetical protein
            B456_007G066700 [Gossypium raimondii]
          Length = 909

 Score =  167 bits (422), Expect = 4e-39
 Identities = 86/152 (56%), Positives = 101/152 (66%), Gaps = 1/152 (0%)
 Frame = -1

Query: 458  ARGRGRTTSSTSAQRSNSRQSACTQCHQLGHSSNDCPSQASHFRSSWSQEMNPQTGESSI 279
            ARGRG TT+S++ QRS++R ++C  C Q GHSSNDCPSQ S  R+S S   N + G+ S+
Sbjct: 740  ARGRGPTTTSSNGQRSSNRHNSCIHCQQTGHSSNDCPSQFSRSRNSQSHT-NSENGDPSV 798

Query: 278  RCNTCGAPCVSRTANTANNRGRKFYSCQSQECNFFVWQDNI-NSNGGRSAPRANISSSAS 102
             C+TCG PCV RTANTANNRGRKFYSC SQECNFF+W+D + N NGGRS P  N   SAS
Sbjct: 799  SCSTCGMPCVLRTANTANNRGRKFYSCPSQECNFFIWEDGVSNGNGGRSIPSTN--CSAS 856

Query: 101  NLIXXXXXXXXXXXXXXXXGMTFVSATGDSVS 6
            N                    TFVSATGD VS
Sbjct: 857  NSGRRGGRGQSGRNRSHAADTTFVSATGDPVS 888


>ref|XP_012489369.1| PREDICTED: DNA topoisomerase 3-alpha isoform X2 [Gossypium raimondii]
            gi|763773367|gb|KJB40490.1| hypothetical protein
            B456_007G066700 [Gossypium raimondii]
            gi|763773369|gb|KJB40492.1| hypothetical protein
            B456_007G066700 [Gossypium raimondii]
          Length = 928

 Score =  167 bits (422), Expect = 4e-39
 Identities = 86/152 (56%), Positives = 101/152 (66%), Gaps = 1/152 (0%)
 Frame = -1

Query: 458  ARGRGRTTSSTSAQRSNSRQSACTQCHQLGHSSNDCPSQASHFRSSWSQEMNPQTGESSI 279
            ARGRG TT+S++ QRS++R ++C  C Q GHSSNDCPSQ S  R+S S   N + G+ S+
Sbjct: 759  ARGRGPTTTSSNGQRSSNRHNSCIHCQQTGHSSNDCPSQFSRSRNSQSHT-NSENGDPSV 817

Query: 278  RCNTCGAPCVSRTANTANNRGRKFYSCQSQECNFFVWQDNI-NSNGGRSAPRANISSSAS 102
             C+TCG PCV RTANTANNRGRKFYSC SQECNFF+W+D + N NGGRS P  N   SAS
Sbjct: 818  SCSTCGMPCVLRTANTANNRGRKFYSCPSQECNFFIWEDGVSNGNGGRSIPSTN--CSAS 875

Query: 101  NLIXXXXXXXXXXXXXXXXGMTFVSATGDSVS 6
            N                    TFVSATGD VS
Sbjct: 876  NSGRRGGRGQSGRNRSHAADTTFVSATGDPVS 907


>gb|KHG06666.1| DNA topoisomerase 3-alpha [Gossypium arboreum]
          Length = 264

 Score =  167 bits (422), Expect = 4e-39
 Identities = 87/152 (57%), Positives = 100/152 (65%), Gaps = 1/152 (0%)
 Frame = -1

Query: 458 ARGRGRTTSSTSAQRSNSRQSACTQCHQLGHSSNDCPSQASHFRSSWSQEMNPQTGESSI 279
           ARGRG TT+S++ QRS++R +AC  C Q GHSSNDCPSQ S  R+S S   N Q GE S+
Sbjct: 67  ARGRGPTTTSSNGQRSSNRHNACIHCQQTGHSSNDCPSQFSRSRNSQSHT-NSQNGEPSV 125

Query: 278 RCNTCGAPCVSRTANTANNRGRKFYSCQSQECNFFVWQDNI-NSNGGRSAPRANISSSAS 102
            C+TCG PCV RTANTANNRGRKFYSC SQECNFF+W+D + N NGGRS P  N   SA 
Sbjct: 126 SCSTCGMPCVLRTANTANNRGRKFYSCPSQECNFFIWEDGVSNGNGGRSIPSTN--RSAF 183

Query: 101 NLIXXXXXXXXXXXXXXXXGMTFVSATGDSVS 6
           N                    TFV+ATGD VS
Sbjct: 184 NSGRRGGRGQSGHNRSHTADTTFVTATGDPVS 215


>ref|XP_011011407.1| PREDICTED: DNA topoisomerase 3-alpha-like isoform X2 [Populus
            euphratica]
          Length = 918

 Score =  166 bits (420), Expect = 6e-39
 Identities = 88/162 (54%), Positives = 103/162 (63%), Gaps = 10/162 (6%)
 Frame = -1

Query: 458  ARGRGRTTSSTSA---------QRSNSRQSACTQCHQLGHSSNDCPSQASHFRSSWSQEM 306
            ARGR  TT+ ++          QRSNSRQ+ C  C+Q GH+S DCPS+ S  R   S  M
Sbjct: 736  ARGRPPTTTPSNGPPTSTPSNPQRSNSRQAPCIYCYQTGHASTDCPSRISATRHVQSHGM 795

Query: 305  NPQTGESSIRCNTCGAPCVSRTANTANNRGRKFYSCQSQECNFFVWQDNINSNGG-RSAP 129
            N Q GESSI C+TCG  CV RTANTANNRGRKFYSC SQ CNFFVW+DN+N+    RSAP
Sbjct: 796  NQQNGESSIPCSTCGTSCVLRTANTANNRGRKFYSCSSQACNFFVWEDNLNNGSAPRSAP 855

Query: 128  RANISSSASNLIXXXXXXXXXXXXXXXXGMTFVSATGDSVSG 3
            R NIS+SASN                   +TFVSATG+ +SG
Sbjct: 856  RPNISNSASNPSRRGGRGRGVQNAGRAADVTFVSATGEPISG 897


>ref|XP_011031138.1| PREDICTED: DNA topoisomerase 3-alpha isoform X2 [Populus euphratica]
          Length = 918

 Score =  166 bits (420), Expect = 6e-39
 Identities = 88/162 (54%), Positives = 103/162 (63%), Gaps = 10/162 (6%)
 Frame = -1

Query: 458  ARGRGRTTSSTSA---------QRSNSRQSACTQCHQLGHSSNDCPSQASHFRSSWSQEM 306
            ARGR  TT+ ++          QRSNSRQ+ C  C+Q GH+S DCPS+ S  R   S  M
Sbjct: 736  ARGRPPTTTPSNGPPTSTPSNPQRSNSRQAPCIYCYQTGHASTDCPSRISATRHVQSHGM 795

Query: 305  NPQTGESSIRCNTCGAPCVSRTANTANNRGRKFYSCQSQECNFFVWQDNINSNGG-RSAP 129
            N Q GESSI C+TCG  CV RTANTANNRGRKFYSC SQ CNFFVW+DN+N+    RSAP
Sbjct: 796  NQQNGESSIPCSTCGTSCVLRTANTANNRGRKFYSCSSQACNFFVWEDNLNNGSAPRSAP 855

Query: 128  RANISSSASNLIXXXXXXXXXXXXXXXXGMTFVSATGDSVSG 3
            R NIS+SASN                   +TFVSATG+ +SG
Sbjct: 856  RPNISNSASNPSRRGGRGRGVQNAGRAADVTFVSATGEPISG 897


>ref|XP_006341743.1| PREDICTED: DNA topoisomerase 3-alpha-like [Solanum tuberosum]
          Length = 915

 Score =  165 bits (418), Expect = 1e-38
 Identities = 89/152 (58%), Positives = 109/152 (71%), Gaps = 1/152 (0%)
 Frame = -1

Query: 455  RGRGRTTSSTSAQRSNSR-QSACTQCHQLGHSSNDCPSQASHFRSSWSQEMNPQTGESSI 279
            RGRG  T+S+SAQR NSR QS+C  C Q GH SNDCPSQAS  R++ +QE++   GESSI
Sbjct: 751  RGRGNPTASSSAQRGNSRAQSSCAYCRQTGHLSNDCPSQASRGRTARAQEVD--NGESSI 808

Query: 278  RCNTCGAPCVSRTANTANNRGRKFYSCQSQECNFFVWQDNINSNGGRSAPRANISSSASN 99
             CN+CGAPC+ RTANTANNRGRKF+SCQSQECNFFVW+DN+  NGGR A RAN S+S S+
Sbjct: 809  PCNSCGAPCILRTANTANNRGRKFFSCQSQECNFFVWEDNL--NGGR-AERANTSASTSS 865

Query: 98   LIXXXXXXXXXXXXXXXXGMTFVSATGDSVSG 3
                               ++FVSATG+ ++G
Sbjct: 866  -GRGGRGRGRGQSGAHSSNVSFVSATGEPITG 896