BLASTX nr result

ID: Cornus23_contig00015945 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00015945
         (2312 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010252356.1| PREDICTED: probable mediator of RNA polymera...   427   e-116
ref|XP_012075305.1| PREDICTED: probable mediator of RNA polymera...   421   e-114
ref|XP_007048434.1| Transcription elongation factor (TFIIS) fami...   421   e-114
ref|XP_012075304.1| PREDICTED: probable mediator of RNA polymera...   417   e-113
ref|XP_008440997.1| PREDICTED: probable mediator of RNA polymera...   415   e-113
ref|XP_002530078.1| conserved hypothetical protein [Ricinus comm...   413   e-112
ref|XP_006427873.1| hypothetical protein CICLE_v10025964mg [Citr...   407   e-110
ref|XP_004141981.1| PREDICTED: probable mediator of RNA polymera...   407   e-110
ref|XP_002265433.2| PREDICTED: probable mediator of RNA polymera...   406   e-110
gb|KDO53372.1| hypothetical protein CISIN_1g018587mg [Citrus sin...   405   e-110
ref|XP_010649433.1| PREDICTED: probable mediator of RNA polymera...   402   e-109
ref|XP_009613975.1| PREDICTED: probable mediator of RNA polymera...   401   e-108
ref|XP_009786138.1| PREDICTED: probable mediator of RNA polymera...   397   e-107
ref|XP_002279496.2| PREDICTED: probable mediator of RNA polymera...   396   e-107
ref|XP_011100935.1| PREDICTED: probable mediator of RNA polymera...   395   e-107
ref|XP_007011109.1| Transcription elongation factor (TFIIS) fami...   395   e-106
ref|XP_012451443.1| PREDICTED: probable mediator of RNA polymera...   394   e-106
ref|XP_012458765.1| PREDICTED: probable mediator of RNA polymera...   394   e-106
ref|XP_010027719.1| PREDICTED: probable mediator of RNA polymera...   390   e-105
ref|XP_010088726.1| hypothetical protein L484_016512 [Morus nota...   390   e-105

>ref|XP_010252356.1| PREDICTED: probable mediator of RNA polymerase II transcription
            subunit 26c [Nelumbo nucifera]
          Length = 349

 Score =  427 bits (1099), Expect = e-116
 Identities = 228/356 (64%), Positives = 255/356 (71%), Gaps = 18/356 (5%)
 Frame = -3

Query: 2247 MDLEDFRVVLSNSRVDLWTLIDTAITVASLDYGHELKNRRDRIVERLYATVAPPCRNCDV 2068
            M+ +DFR +L NS VD+WT IDTAI+VASLDY +ELK+RRD I+ERLY      C+NC++
Sbjct: 1    MNFDDFRSILRNSGVDVWTFIDTAISVASLDYKNELKDRRDGIIERLYVPFVSGCQNCNL 60

Query: 2067 DRQTPNGQIT-----------------SSHEGHKGASPSTPQSIHRXXXXXXXXXXXXXX 1939
            D    N   T                 SS EG +G SPSTPQS                 
Sbjct: 61   DSTRQNCHETKKKVHQTRTEASIIKESSSIEGKRG-SPSTPQSNRDEDHDRSYGHP---- 115

Query: 1938 XGLFDDEEVKILRIKEHLEDPDQSEDSLVELLQSLADMDITFKALKETDIGRHVNRLRKH 1759
               FDDE+ KIL IKEHLEDPDQSEDSLV LLQ LADMD+TFK LKETDIGRHVNRLRKH
Sbjct: 116  ---FDDEQTKILAIKEHLEDPDQSEDSLVNLLQDLADMDLTFKTLKETDIGRHVNRLRKH 172

Query: 1758 SSNEVRKLVKHLVRKWKDLVDEWVKLNPPGELASSNLIADGDSPQQNVPRTVQNGHHQVP 1579
            SSNEVR+LVK LVRKWK+LVDEWVK N PGE A+S LIADGDSPQQN  +  QN HHQVP
Sbjct: 173  SSNEVRRLVKQLVRKWKELVDEWVKSNTPGETAASTLIADGDSPQQNPSKGAQNSHHQVP 232

Query: 1578 DFGYSPNPHNGSSGSDKNNSEPEPKPKVIPRREAPVKPLHSV-XXXXXXXXXSRPLRDTS 1402
            D  YSPNPHNGSS SDKNNSE E K K+IPRRE  ++P  SV           R  +D+S
Sbjct: 233  DVAYSPNPHNGSSSSDKNNSESERKEKIIPRREPQMRPTQSVPASTSVPPNKQREQKDSS 292

Query: 1401 IDLERLASARKRLHENYQEAQNAKKQRTIQVMDIHEIPKPKNAFFGKNKGGFQGRN 1234
            ID ERLASAR+RLHENYQEAQNAKKQRTIQVMDIH+IPKPKN+FF KNKGGFQ R+
Sbjct: 293  IDPERLASARRRLHENYQEAQNAKKQRTIQVMDIHDIPKPKNSFFAKNKGGFQARH 348


>ref|XP_012075305.1| PREDICTED: probable mediator of RNA polymerase II transcription
            subunit 26c isoform X2 [Jatropha curcas]
          Length = 347

 Score =  421 bits (1083), Expect = e-114
 Identities = 223/349 (63%), Positives = 257/349 (73%), Gaps = 11/349 (3%)
 Frame = -3

Query: 2247 MDLEDFRVVLSNSRVDLWTLIDTAITVASLDYGHELKNRRDRIVERLYATVAPPCRNCDV 2068
            MD++DFR +L +S VD+WT I+TAI VAS D+G ELK RRD+IVE LY++    CRNCD 
Sbjct: 1    MDIDDFRSILESSGVDVWTFIETAIMVASSDFGSELKRRRDKIVEMLYSSSDGRCRNCDF 60

Query: 2067 DRQTPNG---QITSSHE------GHKGASPSTPQSIH-RXXXXXXXXXXXXXXXGLFDDE 1918
            D    N       SSHE      G  G+  +TP+SIH                 GL DDE
Sbjct: 61   DVGRINDGHEMKESSHEAKVGGGGGSGSPSTTPRSIHGEEEEEEEEDDELDPYGGLLDDE 120

Query: 1917 EVKILRIKEHLEDPDQSEDSLVELLQSLADMDITFKALKETDIGRHVNRLRKHSSNEVRK 1738
            + KIL IK+ +EDPDQSEDSL++LLQSLADMDITF+ALKETDIGRHVNRLRKHSSN+VRK
Sbjct: 121  QKKILEIKQSIEDPDQSEDSLIDLLQSLADMDITFRALKETDIGRHVNRLRKHSSNDVRK 180

Query: 1737 LVKHLVRKWKDLVDEWVKLNPPGELASSNLIADGDSPQQNVPRTVQNGHHQVPDFGYSPN 1558
            LVK LVRKWK++VDEWV+LNP GE ASS L+ADGDSPQQ +P   QNGHHQVPDF YSPN
Sbjct: 181  LVKQLVRKWKEIVDEWVRLNPQGEHASSALMADGDSPQQKIP---QNGHHQVPDFAYSPN 237

Query: 1557 PHNGSSGSDKNNSEPEPKPKVIPRREAPVKPLHSVXXXXXXXXXSRPLRDTSIDLERLAS 1378
            PHNGSSGSDKNNSEPE KPK +PR+EAP +P+             R  + ++ D ERLAS
Sbjct: 238  PHNGSSGSDKNNSEPERKPKPVPRKEAPPRPIQQSASASHNAQRQREQQQSNFDSERLAS 297

Query: 1377 ARKRLHENYQEAQNAKKQRTIQVMDIHEIPKPKNAFFGKNKGG-FQGRN 1234
            ARKRL ENY+EA NAKKQRTIQVMDIHEIPKPKN FF KNKGG  QGR+
Sbjct: 298  ARKRLQENYKEALNAKKQRTIQVMDIHEIPKPKNTFFSKNKGGASQGRH 346


>ref|XP_007048434.1| Transcription elongation factor (TFIIS) family protein, putative
            isoform 1 [Theobroma cacao]
            gi|590709002|ref|XP_007048435.1| Transcription elongation
            factor (TFIIS) family protein, putative isoform 1
            [Theobroma cacao] gi|508700695|gb|EOX92591.1|
            Transcription elongation factor (TFIIS) family protein,
            putative isoform 1 [Theobroma cacao]
            gi|508700696|gb|EOX92592.1| Transcription elongation
            factor (TFIIS) family protein, putative isoform 1
            [Theobroma cacao]
          Length = 336

 Score =  421 bits (1081), Expect = e-114
 Identities = 228/348 (65%), Positives = 262/348 (75%), Gaps = 10/348 (2%)
 Frame = -3

Query: 2247 MDLEDFRVVLSNSRVDLWTLIDTAITVASLDYGHELKNRRDRIVERLYAT-VAPPCRNCD 2071
            MDL+DFR VL  + VD+WT IDTAI VASLDYG ELK RRDRIVERLYAT +   CRNCD
Sbjct: 1    MDLDDFRSVLETAEVDVWTFIDTAILVASLDYGPELKQRRDRIVERLYATSMVTQCRNCD 60

Query: 2070 VDRQTPNGQIT------SSHEG-HKGASPSTPQSIHRXXXXXXXXXXXXXXXGLFDDEEV 1912
               +  + ++       SSHE   +G SP+ PQS +                GLFDDE+ 
Sbjct: 61   FGERPSDYEVKADLKRESSHEDKRRGGSPNAPQSDN-------GDDELDPYGGLFDDEQK 113

Query: 1911 KILRIKEHLEDPDQSEDSLVELLQSLADMDITFKALKETDIGRHVNRLRKHSSNEVRKLV 1732
            KIL IKEHLE+P QSEDSL++LLQSLADMDITF+ALKETDIGRHVN LRKHSSN+VR+LV
Sbjct: 114  KILEIKEHLEEPHQSEDSLIDLLQSLADMDITFQALKETDIGRHVNILRKHSSNDVRRLV 173

Query: 1731 KHLVRKWKDLVDEWVKLNPPGELASSNLIADGDSPQQNVPRTVQNGHHQVPDFGYSPNPH 1552
            K LVRKWK++VDEWV+LN PGEL SS L+ADGDSPQ+  P   QNG+HQVPDF YSPNPH
Sbjct: 174  KQLVRKWKEIVDEWVRLNQPGELESSALMADGDSPQRKPP---QNGYHQVPDFAYSPNPH 230

Query: 1551 NGSSGSDKNNSEPEPKPKVI-PRREAPVKPLHSVXXXXXXXXXSRPLRDTSIDLERLASA 1375
            NGSSGSDKNNSEPE KPK I PR E P KP +S           R  ++++ D ERLASA
Sbjct: 231  NGSSGSDKNNSEPERKPKPIPPRNEPPPKPTYSA---PVLQNRQREQKESNFDSERLASA 287

Query: 1374 RKRLHENYQEAQNAKKQRTIQVMDIHEIPKPKNAFFGKNKGG-FQGRN 1234
            RKRL ENY+EA+NAK+QRTIQVMDIHE+PKPKNAFFGKNKGG  QGR+
Sbjct: 288  RKRLQENYKEAENAKRQRTIQVMDIHELPKPKNAFFGKNKGGSSQGRH 335


>ref|XP_012075304.1| PREDICTED: probable mediator of RNA polymerase II transcription
            subunit 26c isoform X1 [Jatropha curcas]
            gi|643726633|gb|KDP35313.1| hypothetical protein
            JCGZ_09472 [Jatropha curcas]
          Length = 349

 Score =  417 bits (1071), Expect = e-113
 Identities = 223/351 (63%), Positives = 258/351 (73%), Gaps = 13/351 (3%)
 Frame = -3

Query: 2247 MDLEDFRVVLSNSRVDLWTLIDTAITVASLDYGHELKNRRDRIVERLYATVAPPCRNCDV 2068
            MD++DFR +L +S VD+WT I+TAI VAS D+G ELK RRD+IVE LY++    CRNCD 
Sbjct: 1    MDIDDFRSILESSGVDVWTFIETAIMVASSDFGSELKRRRDKIVEMLYSSSDGRCRNCDF 60

Query: 2067 DRQTPNG---QITSSHE------GHKGASPSTPQSIH-RXXXXXXXXXXXXXXXGLFDDE 1918
            D    N       SSHE      G  G+  +TP+SIH                 GL DDE
Sbjct: 61   DVGRINDGHEMKESSHEAKVGGGGGSGSPSTTPRSIHGEEEEEEEEDDELDPYGGLLDDE 120

Query: 1917 EVKILRIKEHLEDPDQSEDSLVELLQSLADMDITFKALKETDIGRHVNRLRKHSSNEVRK 1738
            + KIL IK+ +EDPDQSEDSL++LLQSLADMDITF+ALKETDIGRHVNRLRKHSSN+VRK
Sbjct: 121  QKKILEIKQSIEDPDQSEDSLIDLLQSLADMDITFRALKETDIGRHVNRLRKHSSNDVRK 180

Query: 1737 LVKHLVRKWKDLVDEWVKLNPPGELASSNLIADGDSPQQNVPRTVQNGHHQVPDFGYSPN 1558
            LVK LVRKWK++VDEWV+LNP GE ASS L+ADGDSPQQ +P   QNGHHQVPDF YSPN
Sbjct: 181  LVKQLVRKWKEIVDEWVRLNPQGEHASSALMADGDSPQQKIP---QNGHHQVPDFAYSPN 237

Query: 1557 PHNGSSGSDKNNSEPEPKPKVIPRREAPVKPLH--SVXXXXXXXXXSRPLRDTSIDLERL 1384
            PHNGSSGSDKNNSEPE KPK +PR+EAP +P+   +           R  + ++ D ERL
Sbjct: 238  PHNGSSGSDKNNSEPERKPKPVPRKEAPPRPIQQSASASHNAQLQRQREQQQSNFDSERL 297

Query: 1383 ASARKRLHENYQEAQNAKKQRTIQVMDIHEIPKPKNAFFGKNKGG-FQGRN 1234
            ASARKRL ENY+EA NAKKQRTIQVMDIHEIPKPKN FF KNKGG  QGR+
Sbjct: 298  ASARKRLQENYKEALNAKKQRTIQVMDIHEIPKPKNTFFSKNKGGASQGRH 348


>ref|XP_008440997.1| PREDICTED: probable mediator of RNA polymerase II transcription
            subunit 26c [Cucumis melo]
          Length = 345

 Score =  415 bits (1067), Expect = e-113
 Identities = 220/350 (62%), Positives = 258/350 (73%), Gaps = 11/350 (3%)
 Frame = -3

Query: 2250 KMDLEDFRVVLSNSRVDLWTLIDTAITVASLDYGHELKNRRDRIVERLYATVAPP--CRN 2077
            ++DL+DFR +L  + VD+WT IDTA+ VASLDYG++LKNRRD IVERLYA  +PP  CRN
Sbjct: 3    RLDLDDFRTILDTAGVDVWTFIDTAMEVASLDYGNQLKNRRDGIVERLYALTSPPSRCRN 62

Query: 2076 CDVDRQ---TPNGQITSSHEGH-KGASPSTPQSIHRXXXXXXXXXXXXXXXGLFDDEEVK 1909
            CD DR      NG       G  KGASPSTPQ +                 GLFDDE+ K
Sbjct: 63   CDTDRNHDGRSNGCEIKQGSGEVKGASPSTPQFV----VVEGDDDGADPYAGLFDDEQKK 118

Query: 1908 ILRIKEHLEDPDQSEDSLVELLQSLADMDITFKALKETDIGRHVNRLRKHSSNEVRKLVK 1729
            +L IKE LE P Q ED+LVELLQ+LADMDITF+ALKETDIGRHVNRLRKHSSN+VR+LVK
Sbjct: 119  VLEIKEQLEIPHQPEDALVELLQNLADMDITFQALKETDIGRHVNRLRKHSSNDVRRLVK 178

Query: 1728 HLVRKWKDLVDEWVKLNPPGELASSNLIADGDSPQQNVPRTVQNGHHQVPDFGYSPNPHN 1549
            HLVRKWK++VDEWV+LN PGE  ++ L+ADGDSPQQ  P   QNG+HQVPDF YSPNPHN
Sbjct: 179  HLVRKWKEIVDEWVRLNQPGE-QTATLLADGDSPQQKAP---QNGYHQVPDFAYSPNPHN 234

Query: 1548 GSSGSDKNNSEPEPKPKVIPRREAPVKPLHSVXXXXXXXXXSR--PLRDTSIDLERLASA 1375
            G SGSD+NNSEPEPK K +PRR+AP KP              +    ++ + D ++LASA
Sbjct: 235  GGSGSDRNNSEPEPKGKSVPRRDAPPKPTQQAPTSSLTPQNRQKEQQKEANFDSQKLASA 294

Query: 1374 RKRLHENYQEAQNAKKQRTIQVMDIHEIPKPKNAFFGKNK---GGFQGRN 1234
            RKRL ENY+EA+NAK+QRTIQVMDIHEIPKPKNAFF KNK   GG QGR+
Sbjct: 295  RKRLQENYKEAENAKRQRTIQVMDIHEIPKPKNAFFSKNKGSGGGSQGRH 344


>ref|XP_002530078.1| conserved hypothetical protein [Ricinus communis]
            gi|223530431|gb|EEF32318.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 362

 Score =  413 bits (1061), Expect = e-112
 Identities = 223/369 (60%), Positives = 262/369 (71%), Gaps = 31/369 (8%)
 Frame = -3

Query: 2247 MDLEDFRVVLSNSRVDLWTLIDTAITVASLDYGHELKNRRDRIVERLYATVAPPCRNCDV 2068
            MD++DFR +L +S VD+WT IDTAI VASLD+G+ELK RRD+IVE LY++ +  CRNCD+
Sbjct: 1    MDVDDFRSILESSGVDVWTFIDTAIVVASLDFGNELKQRRDKIVEMLYSS-SGRCRNCDL 59

Query: 2067 DRQTPNGQITSSHE--------------GHKGASPSTPQSIHRXXXXXXXXXXXXXXXG- 1933
            D     G+I + HE              G  G+  +TP+SIH                  
Sbjct: 60   DV----GRINNGHEIKERSHLESKGGGGGGSGSPSTTPRSIHGDEDVDVVNDDDDDDDDD 115

Query: 1932 --------LFDDEEVKILRIKEHLEDPDQSEDSLVELLQSLADMDITFKALKETDIGRHV 1777
                    LFDDE+ KIL IK+HLEDPDQSEDSLV+LLQSLADMDITFKALKETDIGRHV
Sbjct: 116  DGLDPYAGLFDDEQKKILEIKQHLEDPDQSEDSLVDLLQSLADMDITFKALKETDIGRHV 175

Query: 1776 NRLRKHSSNEVRKLVKHLVRKWKDLVDEWVKLNPPGELASSNLIADGDSPQQNVPRTVQN 1597
            N+LRKH+SN+VR+LVK LVRKWKD+VDEWVKLNPPG+ ASS L+ADGDSP+Q  P   QN
Sbjct: 176  NQLRKHTSNDVRRLVKQLVRKWKDIVDEWVKLNPPGQHASSGLMADGDSPRQKFP---QN 232

Query: 1596 GHHQVPDFGYSPNPHNGSSGSDKNNSEPEPKPKVIPRREAPVKPLH-----SVXXXXXXX 1432
            GHHQVPDF YSPNPHNGSSGSDKNNSEPE +PK +PR+EAP +P       S        
Sbjct: 233  GHHQVPDFAYSPNPHNGSSGSDKNNSEPERRPKPVPRKEAPPRPAQQSVPVSASASHIVQ 292

Query: 1431 XXSRPLRDTSIDLERLASARKRLHENYQEAQNAKKQRTIQVMDIHEIPKP--KNAFFGKN 1258
                  R+ + D +RLASARKRL  NY+EA+NAKKQRTIQVMDIHE+PKP  KN FF KN
Sbjct: 293  RQREQQRENNFDSDRLASARKRLQANYKEAENAKKQRTIQVMDIHELPKPKNKNTFFAKN 352

Query: 1257 K-GGFQGRN 1234
            K GG QGR+
Sbjct: 353  KGGGSQGRH 361


>ref|XP_006427873.1| hypothetical protein CICLE_v10025964mg [Citrus clementina]
            gi|568820070|ref|XP_006464554.1| PREDICTED: probable
            mediator of RNA polymerase II transcription subunit
            26c-like [Citrus sinensis] gi|557529863|gb|ESR41113.1|
            hypothetical protein CICLE_v10025964mg [Citrus
            clementina]
          Length = 353

 Score =  407 bits (1047), Expect = e-110
 Identities = 226/357 (63%), Positives = 260/357 (72%), Gaps = 19/357 (5%)
 Frame = -3

Query: 2247 MDLEDFRVVLSNSRVDLWTLIDTAITVASLDYGHELKNRRDRIVERLYAT-VAPPCRNCD 2071
            MDLEDFR +L  + VD+WT IDTAI VASLDY  ELK RRD+IVERLYAT +A  CRNCD
Sbjct: 1    MDLEDFRSILKTAGVDVWTFIDTAILVASLDYATELKERRDKIVERLYATCIASRCRNCD 60

Query: 2070 -------VDRQTPNGQITSSHEGHKGASPSTPQSIHRXXXXXXXXXXXXXXXG--LFDDE 1918
                   V+++   GQ        + ASPSTP S++                   LFDDE
Sbjct: 61   FGNGVVDVNKEISRGQHDEVKAAQQ-ASPSTPHSVNGDDDIDIENDNDIIDPYGGLFDDE 119

Query: 1917 EVKILRIKEHLEDPDQSEDSLVELLQSLADMDITFKALKETDIGRHVNRLRKHSSNEVRK 1738
            + +IL IKEHLEDPDQSEDSL++LLQSLADMDITFKALKETDIGRHVN+LRKHSSN+VRK
Sbjct: 120  QKRILEIKEHLEDPDQSEDSLIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRK 179

Query: 1737 LVKHLVRKWKDLVDEWVKLNPPGELASSNLIADGDSPQQNVPRTVQNGHHQVPDFGYSPN 1558
            LVKHLVRKWKD+VDEWVKLN PGELASS ++ DGDSPQQ +P   QNG+HQVPDF YSPN
Sbjct: 180  LVKHLVRKWKDIVDEWVKLNQPGELASSAMM-DGDSPQQKIP---QNGNHQVPDFAYSPN 235

Query: 1557 PHNGSSGSDKNNSEPEPKPK--VIPRREA-----PVKPLHSVXXXXXXXXXSRPLRDTSI 1399
            PHNGSSGSDKNNSEPE K K   +PR+EA     P     +           +  R+++ 
Sbjct: 236  PHNGSSGSDKNNSEPERKSKQAPLPRKEALSSRPPQSASPAAPHSVQRPREQKESRESTF 295

Query: 1398 DLE-RLASARKRLHENYQEAQNAKKQRTIQVMDIHEIPKPKNAFFGKNKGG-FQGRN 1234
            D + RLASARKRL ENY+  +NAK+QRTIQVMDIHEIPKPKNAFFGKNKGG  QGR+
Sbjct: 296  DADSRLASARKRLQENYKREENAKRQRTIQVMDIHEIPKPKNAFFGKNKGGSSQGRH 352


>ref|XP_004141981.1| PREDICTED: probable mediator of RNA polymerase II transcription
            subunit 26c [Cucumis sativus] gi|700193190|gb|KGN48394.1|
            hypothetical protein Csa_6G486670 [Cucumis sativus]
          Length = 345

 Score =  407 bits (1045), Expect = e-110
 Identities = 217/350 (62%), Positives = 255/350 (72%), Gaps = 11/350 (3%)
 Frame = -3

Query: 2250 KMDLEDFRVVLSNSRVDLWTLIDTAITVASLDYGHELKNRRDRIVERLYATVAPP--CRN 2077
            ++DL+DFR +L  + VD+WT IDTA+ VASLDYG++LKNRRD IVERLYA  +PP  CRN
Sbjct: 3    RLDLDDFRTILDTAGVDVWTFIDTAMEVASLDYGNQLKNRRDGIVERLYALTSPPSRCRN 62

Query: 2076 CDVDRQ---TPNGQITSSHEGH-KGASPSTPQSIHRXXXXXXXXXXXXXXXGLFDDEEVK 1909
            CD DR      NG       G  K ASPSTPQ +                 GLFDDE+ K
Sbjct: 63   CDTDRNHDGRSNGCEIKQGSGEVKEASPSTPQFV----VVEGDDDGADPYAGLFDDEQKK 118

Query: 1908 ILRIKEHLEDPDQSEDSLVELLQSLADMDITFKALKETDIGRHVNRLRKHSSNEVRKLVK 1729
            +L IKE LE P Q ED+LVELLQ+LADMDITF+ALKETDIGRHVNRLRKH SN+VR+LVK
Sbjct: 119  VLEIKEQLEIPQQPEDALVELLQNLADMDITFQALKETDIGRHVNRLRKHPSNDVRRLVK 178

Query: 1728 HLVRKWKDLVDEWVKLNPPGELASSNLIADGDSPQQNVPRTVQNGHHQVPDFGYSPNPHN 1549
            HLVRKWK++VDEWV+LN PGE  ++ L+ADGDSPQQ  P   QNG+HQVPDF YSPNPHN
Sbjct: 179  HLVRKWKEIVDEWVRLNQPGE-QTATLLADGDSPQQKAP---QNGYHQVPDFAYSPNPHN 234

Query: 1548 GSSGSDKNNSEPEPKPKVIPRREAPVKPLHSVXXXXXXXXXSR--PLRDTSIDLERLASA 1375
            G SGSD+NNSEPEPK K +PRR+A  KP              +    ++ + D ++LASA
Sbjct: 235  GGSGSDRNNSEPEPKGKSVPRRDALPKPTQQAPTSSLTPQNRQKEQQKEANFDSQKLASA 294

Query: 1374 RKRLHENYQEAQNAKKQRTIQVMDIHEIPKPKNAFFGKNK---GGFQGRN 1234
            RKRL ENY+EA+NAK+QRTIQVMDIHEIPKPKNAFF KNK   GG QGR+
Sbjct: 295  RKRLQENYKEAENAKRQRTIQVMDIHEIPKPKNAFFSKNKGSGGGSQGRH 344


>ref|XP_002265433.2| PREDICTED: probable mediator of RNA polymerase II transcription
            subunit 26c [Vitis vinifera]
            gi|731430702|ref|XP_010665135.1| PREDICTED: probable
            mediator of RNA polymerase II transcription subunit 26c
            [Vitis vinifera] gi|296081186|emb|CBI18212.3| unnamed
            protein product [Vitis vinifera]
          Length = 332

 Score =  406 bits (1043), Expect = e-110
 Identities = 212/343 (61%), Positives = 247/343 (72%), Gaps = 5/343 (1%)
 Frame = -3

Query: 2247 MDLEDFRVVLSNSRVDLWTLIDTAITVASLDYGHELKNRRDRIVERLYATVAPPCRNCDV 2068
            MD ++FR +L +S VD+WTLI+TA++VAS+DY  E K RRD IVERLY  V   C NCD 
Sbjct: 1    MDCDEFRSILESSGVDVWTLIETAVSVASVDYSEEFKGRRDSIVERLYTPVVSRCLNCDR 60

Query: 2067 DR-QTPNGQITSSHEGHKGASPS---TPQSIHRXXXXXXXXXXXXXXXGLFDDEEVKILR 1900
            DR   PNG  +   +  +    S   TP+S+ R                  D+E+ KIL 
Sbjct: 61   DRIHKPNGDRSVKEKMDQLQDESWIETPESVERDRDGS------------IDEEQSKILA 108

Query: 1899 IKEHLEDPDQSEDSLVELLQSLADMDITFKALKETDIGRHVNRLRKHSSNEVRKLVKHLV 1720
            IKE LEDPDQ EDSLV+LLQSLADMDITFKALKETDIGRHVNRLRKH SNEVR+LVK LV
Sbjct: 109  IKERLEDPDQLEDSLVDLLQSLADMDITFKALKETDIGRHVNRLRKHPSNEVRRLVKQLV 168

Query: 1719 RKWKDLVDEWVKLNPPGELASSNLIADGDSPQQNVPRTVQNGHHQVPDFGYSPNPHNGSS 1540
            RKWKDLVDEWVKL+ PGE  +S ++ADGDSPQQN  ++  N HHQVPDF YSPNPHNGSS
Sbjct: 169  RKWKDLVDEWVKLSTPGETTASAIVADGDSPQQNHLKSTSNVHHQVPDFAYSPNPHNGSS 228

Query: 1539 GSDKNNSEPEPKPKVIPRREAPVKPLHS-VXXXXXXXXXSRPLRDTSIDLERLASARKRL 1363
            GSDKNN E EPK K +PRRE P KP  +            R  +D+ +D E+LASAR+RL
Sbjct: 229  GSDKNNVELEPKRKAVPRRETPNKPNQTPPIPTSVALNKQREQKDSLVDEEKLASARRRL 288

Query: 1362 HENYQEAQNAKKQRTIQVMDIHEIPKPKNAFFGKNKGGFQGRN 1234
            HENYQEAQNAKKQRTIQVMDIH+IPKPKN FF KN+GG Q ++
Sbjct: 289  HENYQEAQNAKKQRTIQVMDIHDIPKPKNTFFAKNRGGVQAKH 331


>gb|KDO53372.1| hypothetical protein CISIN_1g018587mg [Citrus sinensis]
          Length = 353

 Score =  405 bits (1041), Expect = e-110
 Identities = 224/357 (62%), Positives = 260/357 (72%), Gaps = 19/357 (5%)
 Frame = -3

Query: 2247 MDLEDFRVVLSNSRVDLWTLIDTAITVASLDYGHELKNRRDRIVERLYAT-VAPPCRNCD 2071
            MDL+DFR +L  + VD+WT IDTAI VASLDY  ELK RRD+IVERLYAT +A  CRNCD
Sbjct: 1    MDLDDFRSILKTAGVDVWTFIDTAILVASLDYATELKERRDKIVERLYATCIASRCRNCD 60

Query: 2070 -------VDRQTPNGQITSSHEGHKGASPSTPQSIHRXXXXXXXXXXXXXXXG--LFDDE 1918
                   V+++   GQ        + ASPSTP S++                   LFDDE
Sbjct: 61   FGNGVVDVNKEISRGQHDEVKAAQQ-ASPSTPHSVNGDDDIDIENDNDIIDPYGGLFDDE 119

Query: 1917 EVKILRIKEHLEDPDQSEDSLVELLQSLADMDITFKALKETDIGRHVNRLRKHSSNEVRK 1738
            + +IL IKEHLEDPDQSED+L++LLQSLADMDITFKALKETDIGRHVN+LRKHSSN+VRK
Sbjct: 120  QKRILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRK 179

Query: 1737 LVKHLVRKWKDLVDEWVKLNPPGELASSNLIADGDSPQQNVPRTVQNGHHQVPDFGYSPN 1558
            LVKHLVRKWKD+VDEWVKLN PGELASS ++ DGDSPQQ +P   QNG+HQVPDF YSPN
Sbjct: 180  LVKHLVRKWKDIVDEWVKLNQPGELASSAMM-DGDSPQQKIP---QNGNHQVPDFAYSPN 235

Query: 1557 PHNGSSGSDKNNSEPEPKPK--VIPRREA-----PVKPLHSVXXXXXXXXXSRPLRDTSI 1399
            PHNGSSGSDKNNSEPE K K   +PR+EA     P     +           +  R+++ 
Sbjct: 236  PHNGSSGSDKNNSEPERKSKQAPLPRKEALSSRPPQSASPAAPHSVQRPREQKESRESTF 295

Query: 1398 DLE-RLASARKRLHENYQEAQNAKKQRTIQVMDIHEIPKPKNAFFGKNKGG-FQGRN 1234
            D + RLASARKRL ENY+  +NAK+QRTIQVMDIHEIPKPKNAFFGKNKGG  QGR+
Sbjct: 296  DADSRLASARKRLQENYKREENAKRQRTIQVMDIHEIPKPKNAFFGKNKGGSSQGRH 352


>ref|XP_010649433.1| PREDICTED: probable mediator of RNA polymerase II transcription
            subunit 26c isoform X1 [Vitis vinifera]
            gi|296088637|emb|CBI37628.3| unnamed protein product
            [Vitis vinifera]
          Length = 332

 Score =  402 bits (1033), Expect = e-109
 Identities = 211/344 (61%), Positives = 251/344 (72%), Gaps = 6/344 (1%)
 Frame = -3

Query: 2247 MDLEDFRVVLSNSRVDLWTLIDTAITVASLDYGHELKNRRDRIVERLYATVAPPCRNCDV 2068
            MD ++FR++L NS VD+W  I+TAI+VA  DYG EL++RRD IVER+Y  ++  C +C++
Sbjct: 1    MDRDEFRLILRNSGVDVWEFINTAISVAYSDYGDELRHRRDGIVERMY--MSSRCGSCNL 58

Query: 2067 DRQTP------NGQITSSHEGHKGASPSTPQSIHRXXXXXXXXXXXXXXXGLFDDEEVKI 1906
              Q        + +     +  K  SP TPQSI+R                L D+EE +I
Sbjct: 59   RYQHSGLDKGCDEEKEDEKDDEKDKSPLTPQSINRSGSEDRYGG-------LLDEEEARI 111

Query: 1905 LRIKEHLEDPDQSEDSLVELLQSLADMDITFKALKETDIGRHVNRLRKHSSNEVRKLVKH 1726
            L IKEHLE PDQ +DS+V+LLQ+LADMDITFKALKETDIGRHVNRLRKH SN+VR+LVKH
Sbjct: 112  LDIKEHLEAPDQPDDSIVDLLQTLADMDITFKALKETDIGRHVNRLRKHPSNDVRRLVKH 171

Query: 1725 LVRKWKDLVDEWVKLNPPGELASSNLIADGDSPQQNVPRTVQNGHHQVPDFGYSPNPHNG 1546
            LVRKWKDLVDEWVK NP GE  SS L+A+GDSP Q +PRT   GHHQVPDFGYSPNP NG
Sbjct: 172  LVRKWKDLVDEWVKSNPAGEFTSSALMAEGDSPPQKIPRT---GHHQVPDFGYSPNPQNG 228

Query: 1545 SSGSDKNNSEPEPKPKVIPRREAPVKPLHSVXXXXXXXXXSRPLRDTSIDLERLASARKR 1366
            SSGSDKNN+EPEPK K IPR+E P +P  S          ++  RDT+ID ++ ASARKR
Sbjct: 229  SSGSDKNNAEPEPKVKAIPRKEVPTRPAQSAPVSSSFPPPNKQ-RDTAIDPDKFASARKR 287

Query: 1365 LHENYQEAQNAKKQRTIQVMDIHEIPKPKNAFFGKNKGGFQGRN 1234
            LHENYQEAQNAKKQRTIQVMDIH+IPKPKN FF K K G QGR+
Sbjct: 288  LHENYQEAQNAKKQRTIQVMDIHDIPKPKNTFFAKPKVGSQGRH 331


>ref|XP_009613975.1| PREDICTED: probable mediator of RNA polymerase II transcription
            subunit 26c [Nicotiana tomentosiformis]
          Length = 352

 Score =  401 bits (1031), Expect = e-108
 Identities = 220/358 (61%), Positives = 259/358 (72%), Gaps = 18/358 (5%)
 Frame = -3

Query: 2247 MDLEDFRVVLSNSRVDLWTLIDTAITVASLDYGHELKNRRDRIVERLYATVAPPCRNCDV 2068
            MDL++FR++LS S+VD+WTLID AI+VAS+D G ELK+RRD IVE+LY+T    CR+C+ 
Sbjct: 1    MDLDEFRLILSESKVDVWTLIDAAISVASVDCGDELKHRRDGIVEKLYST---RCRSCN- 56

Query: 2067 DRQTPNGQ--------ITSSHEGHKGASPSTPQSIHRXXXXXXXXXXXXXXXG------L 1930
                 NGQ        +T + E     SP TP+S HR                      L
Sbjct: 57   --DVVNGQYSLDNGERVTRNVETVMNKSPLTPESNHRNNNTSNDNKNDDEEEDVDPYGGL 114

Query: 1929 FDDEE-VKILRIKEHLEDPDQSEDSLVELLQSLADMDITFKALKETDIGRHVNRLRKHSS 1753
            FDD+E  +IL IKE LEDP  S++ +++LLQSLADMDITF+ALKETDIGRHVNRLRKH S
Sbjct: 115  FDDDEQTRILTIKEQLEDPQLSDEDVIDLLQSLADMDITFQALKETDIGRHVNRLRKHPS 174

Query: 1752 NEVRKLVKHLVRKWKDLVDEWVKLNPPGELASSNLI-ADGDSPQQNVPRTVQNGHHQVPD 1576
            NEVR+LVK LVRKWK+ VD+WV+LN P +  SSNLI ADGDSPQQNVP+   NGHHQVPD
Sbjct: 175  NEVRRLVKMLVRKWKETVDDWVRLNQPEQHGSSNLIAADGDSPQQNVPKNQLNGHHQVPD 234

Query: 1575 FGYSPNPHNGSSGSDKNNSEPEPKPK-VIPRREAPVKPLHSVXXXXXXXXXSR-PLRDTS 1402
            F YSPNP NGSS SD+NNSE E KPK V+PR   P +PL S          SR P R+++
Sbjct: 235  FTYSPNPRNGSSSSDRNNSESEYKPKPVLPRNVTPTRPLQSAPKPTSAPPPSRPPPRESA 294

Query: 1401 IDLERLASARKRLHENYQEAQNAKKQRTIQVMDIHEIPKPKNAFFGKNKGGFQGRNHR 1228
            IDLE+L SAR+RL ENYQEAQNAKKQRTIQVMDIHEIPKPKN FF KNKGGFQGR+HR
Sbjct: 295  IDLEKLNSARRRLQENYQEAQNAKKQRTIQVMDIHEIPKPKNGFFAKNKGGFQGRHHR 352


>ref|XP_009786138.1| PREDICTED: probable mediator of RNA polymerase II transcription
            subunit 26c [Nicotiana sylvestris]
          Length = 352

 Score =  397 bits (1021), Expect = e-107
 Identities = 220/355 (61%), Positives = 260/355 (73%), Gaps = 15/355 (4%)
 Frame = -3

Query: 2247 MDLEDFRVVLSNSRVDLWTLIDTAITVASLDYGHELKNRRDRIVERLYATVAPPCRNCD- 2071
            MDL++FR+VLS S+VD+WT+ID AI+VAS+D G ELK+RRD IVE+LY+T    CR+C+ 
Sbjct: 1    MDLDEFRLVLSESKVDVWTMIDAAISVASVDCGDELKHRRDGIVEKLYST---RCRSCND 57

Query: 2070 -VDRQ--TPNGQ-ITSSHEGHKGASPSTPQSIHRXXXXXXXXXXXXXXXG------LFDD 1921
             V+ Q    NGQ +T + E     SP TP+S HR                      LFDD
Sbjct: 58   VVNGQYSLDNGQTVTRNVETVMNKSPITPESNHRNNNTSNDNKNDDEEEDVDPYGGLFDD 117

Query: 1920 EE-VKILRIKEHLEDPDQSEDSLVELLQSLADMDITFKALKETDIGRHVNRLRKHSSNEV 1744
            +E  +IL IKE LEDP  S++ +++LLQSLADMDITF+ALKETDIGRHVNRLRKH SNEV
Sbjct: 118  DEQTRILTIKEQLEDPQLSDEDVIDLLQSLADMDITFQALKETDIGRHVNRLRKHPSNEV 177

Query: 1743 RKLVKHLVRKWKDLVDEWVKLNPPGELASSNLI-ADGDSPQQNVPRTVQNGHHQVPDFGY 1567
            R+LVK LVRKWK+ VD+WV+LN P +  SSNLI ADGDSPQQNV +   NGHHQVPDF Y
Sbjct: 178  RRLVKMLVRKWKETVDDWVRLNQPEQHGSSNLIAADGDSPQQNVQKNQLNGHHQVPDFTY 237

Query: 1566 SPNPHNGSSGSDKNNSEPEPKPKVIP-RREAPVKPLHSVXXXXXXXXXSR-PLRDTSIDL 1393
            SPNP NGSS SD+NNSE E KPK +P R   P +PL S          SR P R+++IDL
Sbjct: 238  SPNPRNGSSSSDRNNSESEHKPKPVPLRNVTPTRPLQSAPKPTSAPPPSRPPPRESAIDL 297

Query: 1392 ERLASARKRLHENYQEAQNAKKQRTIQVMDIHEIPKPKNAFFGKNKGGFQGRNHR 1228
            E+L SAR+RL ENYQEAQNAKKQRTIQVMDIHEIPKPKN FF KNKGGFQGR+HR
Sbjct: 298  EKLNSARRRLQENYQEAQNAKKQRTIQVMDIHEIPKPKNGFFAKNKGGFQGRHHR 352


>ref|XP_002279496.2| PREDICTED: probable mediator of RNA polymerase II transcription
            subunit 26c isoform X2 [Vitis vinifera]
          Length = 331

 Score =  396 bits (1017), Expect = e-107
 Identities = 210/344 (61%), Positives = 250/344 (72%), Gaps = 6/344 (1%)
 Frame = -3

Query: 2247 MDLEDFRVVLSNSRVDLWTLIDTAITVASLDYGHELKNRRDRIVERLYATVAPPCRNCDV 2068
            MD ++FR++L NS VD+W  I+TAI+VA  DYG EL++RRD IVER+Y  ++  C +C++
Sbjct: 1    MDRDEFRLILRNSGVDVWEFINTAISVAYSDYGDELRHRRDGIVERMY--MSSRCGSCNL 58

Query: 2067 DRQTP------NGQITSSHEGHKGASPSTPQSIHRXXXXXXXXXXXXXXXGLFDDEEVKI 1906
              Q        + +     +  K  SP TPQSI+R                L D+EE +I
Sbjct: 59   RYQHSGLDKGCDEEKEDEKDDEKDKSPLTPQSINRSGSEDRYGG-------LLDEEEARI 111

Query: 1905 LRIKEHLEDPDQSEDSLVELLQSLADMDITFKALKETDIGRHVNRLRKHSSNEVRKLVKH 1726
            L IKEHLE PDQ +DS+V+LLQ+LADMDITFKALKETDIGRHVNRLRKH SN+VR+LVKH
Sbjct: 112  LDIKEHLEAPDQPDDSIVDLLQTLADMDITFKALKETDIGRHVNRLRKHPSNDVRRLVKH 171

Query: 1725 LVRKWKDLVDEWVKLNPPGELASSNLIADGDSPQQNVPRTVQNGHHQVPDFGYSPNPHNG 1546
            LVRKWKDLVDEWVK NP GE  SS L+ +GDSP Q +PRT   GHHQVPDFGYSPNP NG
Sbjct: 172  LVRKWKDLVDEWVKSNPAGEFTSSALM-EGDSPPQKIPRT---GHHQVPDFGYSPNPQNG 227

Query: 1545 SSGSDKNNSEPEPKPKVIPRREAPVKPLHSVXXXXXXXXXSRPLRDTSIDLERLASARKR 1366
            SSGSDKNN+EPEPK K IPR+E P +P  S          ++  RDT+ID ++ ASARKR
Sbjct: 228  SSGSDKNNAEPEPKVKAIPRKEVPTRPAQSAPVSSSFPPPNKQ-RDTAIDPDKFASARKR 286

Query: 1365 LHENYQEAQNAKKQRTIQVMDIHEIPKPKNAFFGKNKGGFQGRN 1234
            LHENYQEAQNAKKQRTIQVMDIH+IPKPKN FF K K G QGR+
Sbjct: 287  LHENYQEAQNAKKQRTIQVMDIHDIPKPKNTFFAKPKVGSQGRH 330


>ref|XP_011100935.1| PREDICTED: probable mediator of RNA polymerase II transcription
            subunit 26c [Sesamum indicum]
          Length = 373

 Score =  395 bits (1016), Expect = e-107
 Identities = 217/378 (57%), Positives = 253/378 (66%), Gaps = 38/378 (10%)
 Frame = -3

Query: 2247 MDLEDFRVVLSNSRVDLWTLIDTAITVASLDYGHELKNRRDRIVERLYATVAPPCRNCDV 2068
            MD E+FR +LS S V +W +I+ AI VAS DYG EL+ RRD+IVE LYA  A  CR+C+ 
Sbjct: 1    MDPEEFRAILSRSGVGIWAMIEAAIRVASSDYGEELRRRRDKIVESLYAPAAQLCRSCNG 60

Query: 2067 D-----------------------------------RQTPNGQITSSHEGHKGASPSTPQ 1993
            D                                       N  + S+ +  K  SPSTP+
Sbjct: 61   DVHQNVAQDEQYYPQNISTVYNNSDDIDNNISKKYNNDDDNNNMNSNEDFSK--SPSTPE 118

Query: 1992 SIHRXXXXXXXXXXXXXXXGLFDDEEVKILRIKEHLEDPDQSEDSLVELLQSLADMDITF 1813
            S HR               GLFDDE+ KI+ IKE LEDP+QSED++VELLQ+LADMDITF
Sbjct: 119  SNHRDFSGGEAEEDLDPYGGLFDDEQTKIVTIKEQLEDPNQSEDAVVELLQNLADMDITF 178

Query: 1812 KALKETDIGRHVNRLRKHSSNEVRKLVKHLVRKWKDLVDEWVKLNPPGELASSNLIADGD 1633
            +ALKETDIGRHVNRLRKH SNEVR+LVK LVRKWK+ VDEWVK+N P    +SNLIADGD
Sbjct: 179  QALKETDIGRHVNRLRKHPSNEVRRLVKQLVRKWKETVDEWVKVNQP--QGTSNLIADGD 236

Query: 1632 SPQQNVPRTVQNGHHQVPDFGYSPNPHNGSSGSDKNNSEPEPKPK---VIPRREAPVKPL 1462
            SPQQ++P+  +NGHHQVPDFGYSPNP NG S  ++N +E E KP+     PRREAP KP 
Sbjct: 237  SPQQSIPKNQENGHHQVPDFGYSPNPQNGRSSVERNYAEHETKPRQPQFAPRREAPSKPP 296

Query: 1461 HSVXXXXXXXXXSRPLRDTSIDLERLASARKRLHENYQEAQNAKKQRTIQVMDIHEIPKP 1282
             SV         +R  R+  ID ERL SAR+RL ENYQEAQNAKKQRTIQVMDIHEIPKP
Sbjct: 297  QSV-PKSASAPPNRAQREPVIDDERLNSARRRLQENYQEAQNAKKQRTIQVMDIHEIPKP 355

Query: 1281 KNAFFGKNKGGFQGRNHR 1228
            KNAFF KNKGGFQGR+HR
Sbjct: 356  KNAFFAKNKGGFQGRHHR 373


>ref|XP_007011109.1| Transcription elongation factor (TFIIS) family protein, putative
            isoform 1 [Theobroma cacao] gi|508728022|gb|EOY19919.1|
            Transcription elongation factor (TFIIS) family protein,
            putative isoform 1 [Theobroma cacao]
          Length = 337

 Score =  395 bits (1014), Expect = e-106
 Identities = 216/349 (61%), Positives = 256/349 (73%), Gaps = 11/349 (3%)
 Frame = -3

Query: 2247 MDLEDFRVVLSNSRVDLWTLIDTAITVASLDYGHELKNRRDRIVERLYAT-VAPPCRNCD 2071
            MDL+DFR VL  + VD+WT ID+AI VASLDYG ELK RRD IVERLYAT +   C++CD
Sbjct: 1    MDLDDFRSVLETAGVDVWTFIDSAILVASLDYGQELKQRRDGIVERLYATSMVTRCKSCD 60

Query: 2070 VDRQTPNGQIT---SSHEGHKGA----SPSTPQSIHRXXXXXXXXXXXXXXXGLFDDEEV 1912
               ++   Q+    S +EG  G     SP TPQS +                 LFDDE+ 
Sbjct: 61   FGERSNGYQVNKEGSPNEGKGGEGGRESPFTPQSDNEDGDLDPYGG-------LFDDEQK 113

Query: 1911 KILRIKEHLEDPDQSEDSLVELLQSLADMDITFKALKETDIGRHVNRLRKHSSNEVRKLV 1732
            ++L IKE LE+PDQSEDSLV+LLQSLADMDITF+ALKETDIGRHVN+LRKHSSN+VR+LV
Sbjct: 114  RVLEIKESLEEPDQSEDSLVDLLQSLADMDITFQALKETDIGRHVNKLRKHSSNDVRRLV 173

Query: 1731 KHLVRKWKDLVDEWVKLNPPGELASSNLIADGDSPQQNVPRTVQNGHHQVPDFGYSPNPH 1552
            K LVRKWK++VDEWV++N PGEL S+ L+ DGDSPQQ +P   QNG  QVPDF YSPNPH
Sbjct: 174  KQLVRKWKEIVDEWVRVNQPGELESAALM-DGDSPQQKLP---QNGRQQVPDFAYSPNPH 229

Query: 1551 NGSSGSDKNNSEPEPKPKVI--PRREAPVKPLHSVXXXXXXXXXSRPLRDTSIDLERLAS 1378
            NGS G +KNNSEPE KPK I  PR++ P +P HS           R  ++++ D ERLAS
Sbjct: 230  NGSFGLEKNNSEPERKPKPIPPPRKDPPPRPTHST--PPQNVQRQREQKESNFDSERLAS 287

Query: 1377 ARKRLHENYQEAQNAKKQRTIQVMDIHEIPKPKNAFFGKNK-GGFQGRN 1234
            ARKRL  NY+EA+NAKKQRTIQVMDIHE+PKPKNAFFGKNK GG QGR+
Sbjct: 288  ARKRLQANYKEAENAKKQRTIQVMDIHELPKPKNAFFGKNKGGGSQGRH 336


>ref|XP_012451443.1| PREDICTED: probable mediator of RNA polymerase II transcription
            subunit 26c [Gossypium raimondii]
            gi|763800943|gb|KJB67898.1| hypothetical protein
            B456_010G216800 [Gossypium raimondii]
          Length = 335

 Score =  394 bits (1013), Expect = e-106
 Identities = 212/347 (61%), Positives = 252/347 (72%), Gaps = 9/347 (2%)
 Frame = -3

Query: 2247 MDLEDFRVVLSNSRVDLWTLIDTAITVASLDYGHELKNRRDRIVERLYAT-VAPPCRNCD 2071
            MDL+DFR VL  + VD+WT IDTAI VASLDYG ELK RRD IVERLYAT +   C++CD
Sbjct: 1    MDLDDFRSVLETAGVDVWTFIDTAILVASLDYGQELKQRRDGIVERLYATSMVTKCKSCD 60

Query: 2070 VDRQTPNGQITSSHEGHKGA------SPSTPQSIHRXXXXXXXXXXXXXXXGLFDDEEVK 1909
                +   Q+ +    H+G       SP +PQS +                 LFDDE+ +
Sbjct: 61   FGEGSNGYQLNNESNPHEGGEEGVTGSPFSPQSDNENDDFDPYGG-------LFDDEQKR 113

Query: 1908 ILRIKEHLEDPDQSEDSLVELLQSLADMDITFKALKETDIGRHVNRLRKHSSNEVRKLVK 1729
            +L IKE LE PDQSED+LV+LLQSLADMDITF+ALKETDIGRHVN+LRKHSSN+VR+LVK
Sbjct: 114  VLEIKERLELPDQSEDTLVDLLQSLADMDITFQALKETDIGRHVNKLRKHSSNDVRRLVK 173

Query: 1728 HLVRKWKDLVDEWVKLNPPGELASSNLIADGDSPQQNVPRTVQNGHHQVPDFGYSPNPHN 1549
            HLVRKWKD+VDEWV++N PGE   + L+ DGDSPQQ  P   QNG  QVPDF YSPNPHN
Sbjct: 174  HLVRKWKDIVDEWVRVNQPGEHEPAALM-DGDSPQQKPP---QNGRQQVPDFAYSPNPHN 229

Query: 1548 GSSGSDKNNSEPEPKPKVI-PRREAPVKPLHSVXXXXXXXXXSRPLRDTSIDLERLASAR 1372
            G SGS+KNNSEPE KPK I PR++ P +P H            R  ++T+ D ERLASAR
Sbjct: 230  GGSGSEKNNSEPERKPKPIPPRKDPPSRPTH--LTPPQNVQRQREQKETNFDAERLASAR 287

Query: 1371 KRLHENYQEAQNAKKQRTIQVMDIHEIPKPKNAFFGKNK-GGFQGRN 1234
            KRL E+Y+EA+NAKKQRT+QVMDIHE+PKPKNAFFG+NK GG QGR+
Sbjct: 288  KRLQESYKEAENAKKQRTVQVMDIHELPKPKNAFFGRNKGGGSQGRH 334


>ref|XP_012458765.1| PREDICTED: probable mediator of RNA polymerase II transcription
            subunit 26c isoform X2 [Gossypium raimondii]
            gi|763808077|gb|KJB74979.1| hypothetical protein
            B456_012G017100 [Gossypium raimondii]
          Length = 336

 Score =  394 bits (1011), Expect = e-106
 Identities = 213/347 (61%), Positives = 253/347 (72%), Gaps = 9/347 (2%)
 Frame = -3

Query: 2247 MDLEDFRVVLSNSRVDLWTLIDTAITVASLDYGHELKNRRDRIVERLYAT-VAPPCRNCD 2071
            MDL+DFR VL  + VD+WT IDTAI VASLDYG E K RRD IVERLYAT +   C++CD
Sbjct: 1    MDLDDFRSVLETAGVDVWTFIDTAILVASLDYGQEFKQRRDGIVERLYATSMVTRCKSCD 60

Query: 2070 VDRQTPNGQIT---SSHEGHKGA--SPSTPQSIHRXXXXXXXXXXXXXXXGLFDDEEVKI 1906
               ++   Q+    S HEG +G   SP TP S +                 LFDDE+ ++
Sbjct: 61   FGERSNVYQVNKEDSPHEGKEGGKGSPFTPHSDNEDDDMDPYGG-------LFDDEQKRV 113

Query: 1905 LRIKEHLEDPDQSEDSLVELLQSLADMDITFKALKETDIGRHVNRLRKHSSNEVRKLVKH 1726
            L IKE LE PDQSEDSLV+LLQSLADMDITF+ALKETDIGRHVN+LRKHSSN+VR+LVK 
Sbjct: 114  LEIKERLELPDQSEDSLVDLLQSLADMDITFQALKETDIGRHVNKLRKHSSNDVRRLVKQ 173

Query: 1725 LVRKWKDLVDEWVKLNPPGELASSNLIADGDSPQQNVPRTVQNGHHQVPDFGYSPNPHNG 1546
            LVRKWK++VDEWV++N PGE   + L+ADGDSPQQ +P   QNG  QVPDF YSPNPHNG
Sbjct: 174  LVRKWKEIVDEWVRVNQPGEPEPAGLMADGDSPQQKLP---QNGRQQVPDFAYSPNPHNG 230

Query: 1545 SSGSDKNNSEPEPKPKVIP--RREAPVKPLHSVXXXXXXXXXSRPLRDTSIDLERLASAR 1372
            S GS+KNNSEPE KPK IP  R++ P +  HS           R  ++++ D ERLASAR
Sbjct: 231  SFGSEKNNSEPERKPKPIPPCRKDPPSRHTHST--PPQNVQRQREQKESNFDSERLASAR 288

Query: 1371 KRLHENYQEAQNAKKQRTIQVMDIHEIPKPKNAFFGKNK-GGFQGRN 1234
            KRL E+Y+EA+NAKKQRT+QVMDIHE+PKPKNAFF KNK GG QGR+
Sbjct: 289  KRLQESYKEAENAKKQRTVQVMDIHELPKPKNAFFAKNKGGGSQGRH 335


>ref|XP_010027719.1| PREDICTED: probable mediator of RNA polymerase II transcription
            subunit 26c isoform X2 [Eucalyptus grandis]
            gi|629088043|gb|KCW54296.1| hypothetical protein
            EUGRSUZ_I00261 [Eucalyptus grandis]
          Length = 342

 Score =  390 bits (1002), Expect = e-105
 Identities = 217/352 (61%), Positives = 250/352 (71%), Gaps = 14/352 (3%)
 Frame = -3

Query: 2247 MDLEDFRVVLSNSRVDLWTLIDTAITVASLDYGHELKNRRDRIVERLYA-TVAPPCRNCD 2071
            MDL+DFR VL +S VD+WT IDTAITVASLD   ELK RRD IVERLYA T++  C +C 
Sbjct: 1    MDLDDFRTVLESSGVDVWTFIDTAITVASLDNFDELKRRRDGIVERLYAATLSAKCGSCQ 60

Query: 2070 VDR--QTPNGQIT---------SSHEGHKGASPSTPQSIHRXXXXXXXXXXXXXXXGLFD 1924
             D     PNG I             EG K  SPSTPQS                   LFD
Sbjct: 61   TDGLVDRPNGHIVRGPVQEEKAKGREG-KANSPSTPQSTDMNDELDPFGG-------LFD 112

Query: 1923 DEEVKILRIKEHLEDPDQSEDSLVELLQSLADMDITFKALKETDIGRHVNRLRKHSSNEV 1744
            DE+ +IL IK HLEDPDQS DSLVELLQSLADMDITF+AL+ETDIGRHVN+ RKH SN+V
Sbjct: 113  DEQKRILEIKRHLEDPDQSADSLVELLQSLADMDITFQALEETDIGRHVNQFRKHPSNDV 172

Query: 1743 RKLVKHLVRKWKDLVDEWVKLNPPGELASSNLI-ADGDSPQQNVPRTVQNGHHQVPDFGY 1567
            R+LVKHLVRKWK +VDEWV +N PGE+ASS L+ ADGDSPQQ VP   QNG+ +VP+FG+
Sbjct: 173  RRLVKHLVRKWKAIVDEWVTVNQPGEVASSALLGADGDSPQQKVP---QNGYSKVPEFGH 229

Query: 1566 SPNPHNGSSGSDKNNSEPEPKPKVIPRREAPVKPLHSVXXXXXXXXXSRPLRDTSIDLER 1387
            SPNP NGSSGS++N SEPE K K++ R+E P KP   V          R  +++  D  R
Sbjct: 230  SPNPQNGSSGSERNYSEPEAKAKMVVRKETPSKPHPRVSASASAQNRLREQKESGFDAAR 289

Query: 1386 LASARKRLHENYQEAQNAKKQRTIQVMDIHEIPKPKNAFFGKNK-GGFQGRN 1234
            LASARKRL  NY+EA+NAKKQRTIQVMDIHEIPKPKNAFFGKNK GG QG++
Sbjct: 290  LASARKRLQANYKEAENAKKQRTIQVMDIHEIPKPKNAFFGKNKAGGSQGKH 341


>ref|XP_010088726.1| hypothetical protein L484_016512 [Morus notabilis]
            gi|587846421|gb|EXB36907.1| hypothetical protein
            L484_016512 [Morus notabilis]
          Length = 418

 Score =  390 bits (1001), Expect = e-105
 Identities = 217/342 (63%), Positives = 245/342 (71%), Gaps = 6/342 (1%)
 Frame = -3

Query: 2247 MDLEDFRVVLSNSRVDLWTLIDTAITVASLDYGHELKNRRDRIVERLYATVAPPCRNCDV 2068
            MD +DFR +L +S VD+WT IDTAI VAS+DYG EL+ RRD IVERLYA  +    + D 
Sbjct: 1    MDYDDFRAILDSSGVDVWTFIDTAIAVASMDYGGELRQRRDGIVERLYAASSSSSAS-DH 59

Query: 2067 DRQTPNGQITSSHEGHKGASPSTPQSIHRXXXXXXXXXXXXXXXGLFDDEEVKILRIKEH 1888
             R     +   +    +  SP TPQSI R                LFDDE+ KIL IKE 
Sbjct: 60   HRPRHYDREAKTAGEKERVSPPTPQSIDRENSDNDGEGLDPYGG-LFDDEQKKILEIKEQ 118

Query: 1887 LEDPDQSEDSLVELLQSLADMDITFKALKETDIGRHVNRLRKHSSNEVRKLVKHLVRKWK 1708
            LED DQSED+LVELLQSLADMDITF+ALKETDIGRHVNRLRKH S+EV++LVK +VRKWK
Sbjct: 119  LEDSDQSEDTLVELLQSLADMDITFQALKETDIGRHVNRLRKHPSSEVKRLVKQVVRKWK 178

Query: 1707 DLVDEWVKLNPPGELASSNLIADGDSPQQNVPRTVQNGHHQVPDFGYSPNPHNGSSGSDK 1528
            D VDEWVKLN PGE AS++L+ DGDSPQQ +P   QNGHHQVPDF YSPNPHNGSSGSDK
Sbjct: 179  DTVDEWVKLNQPGEHASNSLM-DGDSPQQKIP---QNGHHQVPDFAYSPNPHNGSSGSDK 234

Query: 1527 NNSEPEPKPKVIP-RREA---PVKPLHSVXXXXXXXXXSRPLRDTSIDLERLASARKRLH 1360
            NNSEPE KPK +P RREA   P+ P              R  R+ S D E+LASARKRL 
Sbjct: 235  NNSEPEQKPKAVPSRREALPKPMNPSVPQSAHSTPQNRQREQREGSFDAEKLASARKRLQ 294

Query: 1359 ENYQEAQNAKKQRTIQVMDIHEIPKP--KNAFFGKNKGGFQG 1240
            ENY+EA+NAKKQRTIQVMDIHEIPKP  KNAFF KNKGG  G
Sbjct: 295  ENYKEAENAKKQRTIQVMDIHEIPKPKAKNAFFPKNKGGGGG 336


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