BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00015832
         (487 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ALM62223.1| RNA-dependent RNA polymerase [Soybean-associated ...    65   3e-08

>gb|ALM62223.1| RNA-dependent RNA polymerase [Soybean-associated mycoflexivirus 1]
          Length = 2084

 Score = 64.7 bits (156), Expect = 3e-08
 Identities = 52/163 (31%), Positives = 75/163 (46%), Gaps = 2/163 (1%)
 Frame = +3

Query: 3    DKLVPHPPKWSAMKHAEYCDLTITEYESHRTKEAVYAKLDAHDPDRTGSDIKISLKNQVI 182
            D  +  P  +  M+  E   L    + S RTK+ + A +   D D   +  +I  K Q I
Sbjct: 1725 DSWLAEPENFPLMEQCEAEKLA--SWASKRTKKTLVASIAKQDLDMHYTFTRIFPKGQYI 1782

Query: 183  KKDEKRHKKEAIPGQLIHEYDIGQTLSDAPYALFLEN-ELFDAFPPNFLFYRRMNPQQFV 359
            KK  K  +  A   Q + ++ +G+   DAP ALFLE   L  A+   +L + R +P    
Sbjct: 1783 KKKAK-WRCNAFASQTVSDFHLGRIFRDAPRALFLEKMALKHAYDSTYL-HCRASPDDLS 1840

Query: 360  DAYKRRWRVGNGVHT-SDVTRWDVGCDAGVLNFDVHVMHKCGF 485
              Y+  W    GV T +D T WD G D   L FD+ +M  C F
Sbjct: 1841 AWYRNHW--SPGVMTGNDYTAWDSGIDHVFLEFDLWLMEVCHF 1881