BLASTX nr result
ID: Cornus23_contig00014325
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cornus23_contig00014325
(357 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN66775.1| hypothetical protein VITISV_035302 [Vitis vinifera] 78 4e-26
gb|ABG22123.1| polyprotein [Prunus avium] 81 7e-25
gb|ABG22121.1| polyprotein [Solanum melongena] 79 1e-24
ref|XP_010676254.1| PREDICTED: uncharacterized protein LOC104892... 76 2e-24
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118... 74 3e-24
ref|XP_009787759.1| PREDICTED: uncharacterized protein LOC104235... 73 5e-24
ref|XP_010068565.1| PREDICTED: probable LRR receptor-like serine... 72 1e-23
ref|XP_008370919.1| PREDICTED: uncharacterized protein LOC103434... 79 1e-23
gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group] 72 1e-23
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group] 70 2e-23
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-... 72 4e-23
gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group] 71 4e-23
emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group] 69 6e-23
emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group] 69 6e-23
emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group] 67 8e-23
gb|ABA91380.1| retrotransposon protein, putative, Ty1-copia subc... 67 7e-22
gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-... 69 1e-21
gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subc... 69 1e-21
gb|AAL91607.1|AC099400_13 Putative pol polyprotein [Oryza sativa... 73 2e-21
emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera] 68 3e-21
>emb|CAN66775.1| hypothetical protein VITISV_035302 [Vitis vinifera]
Length = 734
Score = 77.8 bits (190), Expect(2) = 4e-26
Identities = 38/51 (74%), Positives = 42/51 (82%)
Frame = -2
Query: 353 VGSIMYAMVCIRLDISHAVSVVSRYMDRLGKVHLQAVKWILQYLRGTVDVG 201
VGSIMY MVC RL+ SHAVSVVSRYMD K+H QAVKWIL++LRGT VG
Sbjct: 591 VGSIMYVMVCTRLEKSHAVSVVSRYMDHPEKIHWQAVKWILRHLRGTSHVG 641
Score = 67.0 bits (162), Expect(2) = 4e-26
Identities = 36/64 (56%), Positives = 43/64 (67%)
Frame = -1
Query: 195 GLVYDGGNDPCGSVVRYVDSDYAVDLDRKRFLTRYIFTLFGSMIG*KAAL*CTVALSMTE 16
GLVYD D +V YVD DY DLDR+R LTRY+FTL G++I KA L T+ALS E
Sbjct: 641 GLVYDKNFDISRGIVGYVDFDYVGDLDRRRSLTRYVFTLCGNVISWKATLQSTIALSTIE 700
Query: 15 AEYM 4
A+ M
Sbjct: 701 AKCM 704
>gb|ABG22123.1| polyprotein [Prunus avium]
Length = 276
Score = 80.9 bits (198), Expect(2) = 7e-25
Identities = 40/54 (74%), Positives = 44/54 (81%)
Frame = -2
Query: 356 AVGSIMYAMVCIRLDISHAVSVVSRYMDRLGKVHLQAVKWILQYLRGTVDVGYL 195
AVGS+MYAMVC R DIS AVS+VSRYM GK H QAVKWIL+Y+ GTVDVG L
Sbjct: 108 AVGSLMYAMVCTRPDISQAVSIVSRYMHNPGKGHWQAVKWILRYILGTVDVGLL 161
Score = 59.7 bits (143), Expect(2) = 7e-25
Identities = 32/65 (49%), Positives = 42/65 (64%)
Frame = -1
Query: 195 GLVYDGGNDPCGSVVRYVDSDYAVDLDRKRFLTRYIFTLFGSMIG*KAAL*CTVALSMTE 16
GL++ VV YVDSDYA DLD++R T ++FT+ G + ++ L TVALS TE
Sbjct: 159 GLLFQQDKVSGQCVVGYVDSDYAGDLDKRRSTTGFVFTIAGGPVSWRSILQSTVALSTTE 218
Query: 15 AEYMA 1
AEYMA
Sbjct: 219 AEYMA 223
>gb|ABG22121.1| polyprotein [Solanum melongena]
Length = 361
Score = 78.6 bits (192), Expect(2) = 1e-24
Identities = 38/52 (73%), Positives = 43/52 (82%)
Frame = -2
Query: 356 AVGSIMYAMVCIRLDISHAVSVVSRYMDRLGKVHLQAVKWILQYLRGTVDVG 201
AVGS+MYAMVC R DIS AVSVVSRYM GK H QAVKWIL+Y++ TVD+G
Sbjct: 193 AVGSLMYAMVCTRSDISQAVSVVSRYMHDPGKGHWQAVKWILRYIKNTVDIG 244
Score = 61.6 bits (148), Expect(2) = 1e-24
Identities = 34/65 (52%), Positives = 41/65 (63%)
Frame = -1
Query: 195 GLVYDGGNDPCGSVVRYVDSDYAVDLDRKRFLTRYIFTLFGSMIG*KAAL*CTVALSMTE 16
GLV++ VV Y DSDYA DLD++R T Y+FTL + K+ L TVALS TE
Sbjct: 244 GLVFEQDKSLGSCVVGYCDSDYAGDLDKRRSTTGYLFTLAKGPVSWKSTLQATVALSTTE 303
Query: 15 AEYMA 1
AEYMA
Sbjct: 304 AEYMA 308
>ref|XP_010676254.1| PREDICTED: uncharacterized protein LOC104892119 [Beta vulgaris subsp.
vulgaris]
Length = 1947
Score = 75.9 bits (185), Expect(2) = 2e-24
Identities = 37/54 (68%), Positives = 44/54 (81%)
Frame = -2
Query: 356 AVGSIMYAMVCIRLDISHAVSVVSRYMDRLGKVHLQAVKWILQYLRGTVDVGYL 195
AVGS+MYAMVC R D++HAVSVVSR+M + GK H QAVK I +YLRGT DVG +
Sbjct: 1208 AVGSLMYAMVCTRPDLAHAVSVVSRFMTQPGKEHWQAVKRIFRYLRGTADVGLI 1261
Score = 63.5 bits (153), Expect(2) = 2e-24
Identities = 35/65 (53%), Positives = 44/65 (67%)
Frame = -1
Query: 195 GLVYDGGNDPCGSVVRYVDSDYAVDLDRKRFLTRYIFTLFGSMIG*KAAL*CTVALSMTE 16
GL+Y GND V Y DSDYA D+D +R +T Y++TL GS++ KA L +V LS TE
Sbjct: 1259 GLIY--GNDTECLVTGYSDSDYAGDIDTRRSMTGYVYTLGGSVVSWKATLQSSVTLSTTE 1316
Query: 15 AEYMA 1
AEYMA
Sbjct: 1317 AEYMA 1321
>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
copia LTR rider [Solanum lycopersicum]
Length = 1307
Score = 73.9 bits (180), Expect(2) = 3e-24
Identities = 36/54 (66%), Positives = 44/54 (81%)
Frame = -2
Query: 356 AVGSIMYAMVCIRLDISHAVSVVSRYMDRLGKVHLQAVKWILQYLRGTVDVGYL 195
AVGS+MYAMVC R D++HAVSVVSR+M + G+ H QAVK I +YLRGT DVG +
Sbjct: 1095 AVGSLMYAMVCTRPDLAHAVSVVSRFMGQPGREHWQAVKRIFRYLRGTSDVGLI 1148
Score = 64.7 bits (156), Expect(2) = 3e-24
Identities = 37/65 (56%), Positives = 45/65 (69%)
Frame = -1
Query: 195 GLVYDGGNDPCGSVVRYVDSDYAVDLDRKRFLTRYIFTLFGSMIG*KAAL*CTVALSMTE 16
GL+Y GG+ C V Y DSDYA D+D +R +T Y+FTL GS++ KA L TV LS TE
Sbjct: 1146 GLIY-GGDTQC-LVTGYSDSDYAGDVDTRRSMTGYVFTLGGSVVSWKATLQPTVTLSTTE 1203
Query: 15 AEYMA 1
AEYMA
Sbjct: 1204 AEYMA 1208
>ref|XP_009787759.1| PREDICTED: uncharacterized protein LOC104235647 [Nicotiana
sylvestris]
Length = 985
Score = 73.2 bits (178), Expect(2) = 5e-24
Identities = 36/52 (69%), Positives = 41/52 (78%)
Frame = -2
Query: 356 AVGSIMYAMVCIRLDISHAVSVVSRYMDRLGKVHLQAVKWILQYLRGTVDVG 201
AVGSIMYAMVC R DI+ +VSVVSRYM GK H +AVKWIL+YL+G VG
Sbjct: 454 AVGSIMYAMVCTRPDIAQSVSVVSRYMSNPGKRHWEAVKWILRYLKGASGVG 505
Score = 64.7 bits (156), Expect(2) = 5e-24
Identities = 34/53 (64%), Positives = 39/53 (73%)
Frame = -1
Query: 159 SVVRYVDSDYAVDLDRKRFLTRYIFTLFGSMIG*KAAL*CTVALSMTEAEYMA 1
S++ YVDSDYA DLDR+R T YIFTL GS + K+ L VALS TEAEYMA
Sbjct: 516 SILGYVDSDYAGDLDRRRSTTGYIFTLVGSAVSWKSTLQSIVALSTTEAEYMA 568
>ref|XP_010068565.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
kinase At4g08850 [Eucalyptus grandis]
Length = 1365
Score = 71.6 bits (174), Expect(2) = 1e-23
Identities = 33/54 (61%), Positives = 42/54 (77%)
Frame = -2
Query: 356 AVGSIMYAMVCIRLDISHAVSVVSRYMDRLGKVHLQAVKWILQYLRGTVDVGYL 195
AVGS+MYAMVC R D++HAVS+VSRYM GK H +AVKWI +YL T+ +G +
Sbjct: 177 AVGSLMYAMVCSRPDLAHAVSLVSRYMSNPGKEHWEAVKWIFRYLDRTIGMGLM 230
Score = 65.1 bits (157), Expect(2) = 1e-23
Identities = 33/49 (67%), Positives = 38/49 (77%)
Frame = -1
Query: 147 YVDSDYAVDLDRKRFLTRYIFTLFGSMIG*KAAL*CTVALSMTEAEYMA 1
YVDSD+A DLD++RF+T Y+FTL G I KA L TVALS TEAEYMA
Sbjct: 243 YVDSDFAGDLDKRRFITGYVFTLGGGAISWKAMLQATVALSTTEAEYMA 291
>ref|XP_008370919.1| PREDICTED: uncharacterized protein LOC103434364 [Malus domestica]
Length = 1100
Score = 79.3 bits (194), Expect(2) = 1e-23
Identities = 39/53 (73%), Positives = 43/53 (81%)
Frame = -2
Query: 353 VGSIMYAMVCIRLDISHAVSVVSRYMDRLGKVHLQAVKWILQYLRGTVDVGYL 195
VGS+MYAMVC R DIS AVS+VSRYM GK H QAVKWIL+Y+ GTVDVG L
Sbjct: 257 VGSLMYAMVCTRPDISQAVSIVSRYMHNPGKGHWQAVKWILRYILGTVDVGLL 309
Score = 57.4 bits (137), Expect(2) = 1e-23
Identities = 31/65 (47%), Positives = 41/65 (63%)
Frame = -1
Query: 195 GLVYDGGNDPCGSVVRYVDSDYAVDLDRKRFLTRYIFTLFGSMIG*KAAL*CTVALSMTE 16
GL++ VV YVD DYA DLD++R T ++FT+ G + ++ L TVALS TE
Sbjct: 307 GLLFQRDKFTGQCVVGYVDFDYAGDLDKRRSTTGFVFTIAGGPVSWRSILQSTVALSTTE 366
Query: 15 AEYMA 1
AEYMA
Sbjct: 367 AEYMA 371
>gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1211
Score = 71.6 bits (174), Expect(2) = 1e-23
Identities = 33/47 (70%), Positives = 39/47 (82%)
Frame = -2
Query: 353 VGSIMYAMVCIRLDISHAVSVVSRYMDRLGKVHLQAVKWILQYLRGT 213
VGS+MYAMVC RLD+SHA+SVVSRYM GK H + V+WI +YLRGT
Sbjct: 999 VGSLMYAMVCSRLDLSHALSVVSRYMANPGKEHWKVVQWIFKYLRGT 1045
Score = 64.7 bits (156), Expect(2) = 1e-23
Identities = 37/69 (53%), Positives = 44/69 (63%)
Frame = -1
Query: 207 CWLFGLVYDGGNDPCGSVVRYVDSDYAVDLDRKRFLTRYIFTLFGSMIG*KAAL*CTVAL 28
C FG DG +V YVDSD+A DLDR+R LT Y+FT+ G + KA+L TVAL
Sbjct: 1049 CLQFGRSRDG-------LVGYVDSDFAGDLDRRRSLTGYVFTIGGCAVSWKASLQATVAL 1101
Query: 27 SMTEAEYMA 1
S TE EYMA
Sbjct: 1102 STTEVEYMA 1110
>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1241
Score = 69.7 bits (169), Expect(2) = 2e-23
Identities = 33/48 (68%), Positives = 39/48 (81%)
Frame = -2
Query: 356 AVGSIMYAMVCIRLDISHAVSVVSRYMDRLGKVHLQAVKWILQYLRGT 213
AV S+MYAMVC R D+SHA+SVVSRYM GK H +AV+WI +YLRGT
Sbjct: 1028 AVSSLMYAMVCSRPDLSHALSVVSRYMANPGKEHWKAVQWIFRYLRGT 1075
Score = 65.9 bits (159), Expect(2) = 2e-23
Identities = 38/69 (55%), Positives = 45/69 (65%)
Frame = -1
Query: 207 CWLFGLVYDGGNDPCGSVVRYVDSDYAVDLDRKRFLTRYIFTLFGSMIG*KAAL*CTVAL 28
C FG DG +V YVDSD+A DLDR+R LT Y+FT+ G + KA+L TVAL
Sbjct: 1079 CLQFGRSSDG-------LVGYVDSDFAGDLDRRRSLTGYVFTVGGCAVSWKASLQATVAL 1131
Query: 27 SMTEAEYMA 1
S TEAEYMA
Sbjct: 1132 STTEAEYMA 1140
>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group] gi|77548751|gb|ABA91548.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 2340
Score = 72.0 bits (175), Expect(2) = 4e-23
Identities = 34/48 (70%), Positives = 40/48 (83%)
Frame = -2
Query: 356 AVGSIMYAMVCIRLDISHAVSVVSRYMDRLGKVHLQAVKWILQYLRGT 213
AVGS+MYAMVC R D+SHA+SVVSRYM GK H +AV+WI +YLRGT
Sbjct: 1326 AVGSLMYAMVCSRPDLSHALSVVSRYMANPGKEHWKAVQWIFRYLRGT 1373
Score = 62.8 bits (151), Expect(2) = 4e-23
Identities = 37/69 (53%), Positives = 43/69 (62%)
Frame = -1
Query: 207 CWLFGLVYDGGNDPCGSVVRYVDSDYAVDLDRKRFLTRYIFTLFGSMIG*KAAL*CTVAL 28
C FG DG +V YVDSD+A DLDR R L Y+FT+ G + KA+L TVAL
Sbjct: 1377 CLQFGRSRDG-------LVGYVDSDFAGDLDRGRSLAGYVFTIGGCAVSWKASLQATVAL 1429
Query: 27 SMTEAEYMA 1
S TEAEYMA
Sbjct: 1430 STTEAEYMA 1438
>gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1243
Score = 71.2 bits (173), Expect(2) = 4e-23
Identities = 33/48 (68%), Positives = 40/48 (83%)
Frame = -2
Query: 356 AVGSIMYAMVCIRLDISHAVSVVSRYMDRLGKVHLQAVKWILQYLRGT 213
AVGS+MYAMVC R D+SHA+SVV+RYM GK H +AV+WI +YLRGT
Sbjct: 1091 AVGSLMYAMVCCRPDLSHALSVVNRYMANPGKEHWKAVQWIFRYLRGT 1138
Score = 63.5 bits (153), Expect(2) = 4e-23
Identities = 32/52 (61%), Positives = 40/52 (76%)
Frame = -1
Query: 156 VVRYVDSDYAVDLDRKRFLTRYIFTLFGSMIG*KAAL*CTVALSMTEAEYMA 1
+V YVDSD+A DLDR+R +T Y+FT+ G + KA+L TVALS TEAEYMA
Sbjct: 1152 LVGYVDSDFAGDLDRRRSITGYVFTIGGCAVSWKASLQATVALSTTEAEYMA 1203
>emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group]
Length = 1205
Score = 69.3 bits (168), Expect(2) = 6e-23
Identities = 32/48 (66%), Positives = 39/48 (81%)
Frame = -2
Query: 356 AVGSIMYAMVCIRLDISHAVSVVSRYMDRLGKVHLQAVKWILQYLRGT 213
AVGS+MYAM+C R D+SHA+SVVSRYM GK H +AV+WI +YL GT
Sbjct: 1025 AVGSLMYAMICSRPDLSHALSVVSRYMVNPGKEHWKAVQWIFRYLHGT 1072
Score = 64.7 bits (156), Expect(2) = 6e-23
Identities = 37/69 (53%), Positives = 45/69 (65%)
Frame = -1
Query: 207 CWLFGLVYDGGNDPCGSVVRYVDSDYAVDLDRKRFLTRYIFTLFGSMIG*KAAL*CTVAL 28
C FG DG +V YVDSD+A DLDR+R LT Y+FT+ G + KA+L TVAL
Sbjct: 1076 CLQFGRSRDG-------LVGYVDSDFAGDLDRRRSLTGYVFTIGGCAVSWKASLQATVAL 1128
Query: 27 SMTEAEYMA 1
S TEAEY+A
Sbjct: 1129 STTEAEYIA 1137
>emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group]
Length = 1037
Score = 69.3 bits (168), Expect(2) = 6e-23
Identities = 32/48 (66%), Positives = 39/48 (81%)
Frame = -2
Query: 356 AVGSIMYAMVCIRLDISHAVSVVSRYMDRLGKVHLQAVKWILQYLRGT 213
AVGS+MYAM+C R D+SHA+SVVSRYM GK H +AV+WI +YL GT
Sbjct: 857 AVGSLMYAMICSRPDLSHALSVVSRYMVNPGKEHWKAVQWIFRYLHGT 904
Score = 64.7 bits (156), Expect(2) = 6e-23
Identities = 37/69 (53%), Positives = 45/69 (65%)
Frame = -1
Query: 207 CWLFGLVYDGGNDPCGSVVRYVDSDYAVDLDRKRFLTRYIFTLFGSMIG*KAAL*CTVAL 28
C FG DG +V YVDSD+A DLDR+R LT Y+FT+ G + KA+L TVAL
Sbjct: 908 CLQFGRSRDG-------LVGYVDSDFAGDLDRRRSLTGYVFTIGGCAVSWKASLQATVAL 960
Query: 27 SMTEAEYMA 1
S TEAEY+A
Sbjct: 961 STTEAEYIA 969
>emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]
Length = 1181
Score = 67.4 bits (163), Expect(2) = 8e-23
Identities = 31/48 (64%), Positives = 38/48 (79%)
Frame = -2
Query: 356 AVGSIMYAMVCIRLDISHAVSVVSRYMDRLGKVHLQAVKWILQYLRGT 213
AVGS+MYAM+C R D+SHA+SVVSRYM GK H + V+WI +YL GT
Sbjct: 968 AVGSLMYAMICSRPDLSHALSVVSRYMANPGKEHWKDVQWIFRYLHGT 1015
Score = 66.2 bits (160), Expect(2) = 8e-23
Identities = 38/69 (55%), Positives = 45/69 (65%)
Frame = -1
Query: 207 CWLFGLVYDGGNDPCGSVVRYVDSDYAVDLDRKRFLTRYIFTLFGSMIG*KAAL*CTVAL 28
C FG DG +V YVDSD+A DLDR+R LT Y+FT+ G + KA+L TVAL
Sbjct: 1019 CLQFGRSRDG-------LVGYVDSDFAGDLDRRRSLTGYVFTIGGCAVSWKASLQATVAL 1071
Query: 27 SMTEAEYMA 1
S TEAEYMA
Sbjct: 1072 STTEAEYMA 1080
>gb|ABA91380.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1138
Score = 67.4 bits (163), Expect(2) = 7e-22
Identities = 32/47 (68%), Positives = 38/47 (80%)
Frame = -2
Query: 353 VGSIMYAMVCIRLDISHAVSVVSRYMDRLGKVHLQAVKWILQYLRGT 213
VGS+MYAMVC R D+SHA+SVVSRYM GK H +AV+WI +YL GT
Sbjct: 926 VGSLMYAMVCSRPDLSHALSVVSRYMANPGKEHWKAVQWIFRYLCGT 972
Score = 63.2 bits (152), Expect(2) = 7e-22
Identities = 37/69 (53%), Positives = 43/69 (62%)
Frame = -1
Query: 207 CWLFGLVYDGGNDPCGSVVRYVDSDYAVDLDRKRFLTRYIFTLFGSMIG*KAAL*CTVAL 28
C FG DG +V YVDSD+A DLDR+R L Y+FT+ G + KA L TVAL
Sbjct: 976 CLQFGRSRDG-------LVGYVDSDFAGDLDRRRSLAGYVFTIGGCAVSWKANLQATVAL 1028
Query: 27 SMTEAEYMA 1
S TEAEYMA
Sbjct: 1029 STTEAEYMA 1037
>gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group] gi|77549942|gb|ABA92739.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 1373
Score = 69.3 bits (168), Expect(2) = 1e-21
Identities = 32/48 (66%), Positives = 40/48 (83%)
Frame = -2
Query: 356 AVGSIMYAMVCIRLDISHAVSVVSRYMDRLGKVHLQAVKWILQYLRGT 213
AVGS+MYAMVC R D+S+A+S+VSRYM GK H +AV+WI +YLRGT
Sbjct: 1120 AVGSLMYAMVCSRPDLSYAMSLVSRYMSNPGKEHWRAVQWIFRYLRGT 1167
Score = 60.5 bits (145), Expect(2) = 1e-21
Identities = 30/52 (57%), Positives = 37/52 (71%)
Frame = -1
Query: 156 VVRYVDSDYAVDLDRKRFLTRYIFTLFGSMIG*KAAL*CTVALSMTEAEYMA 1
++ YVDSDYA DLDR+R LT Y+FT+ + +A L VALS TEAEYMA
Sbjct: 1181 LIGYVDSDYAADLDRRRSLTGYVFTIGSCAVSWRATLQSVVALSTTEAEYMA 1232
>gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 69.3 bits (168), Expect(2) = 1e-21
Identities = 32/48 (66%), Positives = 40/48 (83%)
Frame = -2
Query: 356 AVGSIMYAMVCIRLDISHAVSVVSRYMDRLGKVHLQAVKWILQYLRGT 213
AVGS+MYAMVC R D+S+A+S+VSRYM GK H +AV+WI +YLRGT
Sbjct: 1120 AVGSLMYAMVCSRPDLSYAMSLVSRYMSNPGKEHWRAVQWIFRYLRGT 1167
Score = 60.5 bits (145), Expect(2) = 1e-21
Identities = 30/52 (57%), Positives = 37/52 (71%)
Frame = -1
Query: 156 VVRYVDSDYAVDLDRKRFLTRYIFTLFGSMIG*KAAL*CTVALSMTEAEYMA 1
++ YVDSDYA DLDR+R LT Y+FT+ + +A L VALS TEAEYMA
Sbjct: 1181 LIGYVDSDYAADLDRRRSLTGYVFTIGSCAVSWRATLQSVVALSTTEAEYMA 1232
>gb|AAL91607.1|AC099400_13 Putative pol polyprotein [Oryza sativa Japonica Group]
gi|18542925|gb|AAL75759.1| Putative pol polyprotein
[Oryza sativa Japonica Group] gi|31429763|gb|AAP51772.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 1005
Score = 73.2 bits (178), Expect(2) = 2e-21
Identities = 34/50 (68%), Positives = 41/50 (82%)
Frame = -2
Query: 356 AVGSIMYAMVCIRLDISHAVSVVSRYMDRLGKVHLQAVKWILQYLRGTVD 207
AVGS+MYAMVC R D+SHA+S+VSRYM GK H +AV+WI +YLRGT D
Sbjct: 792 AVGSLMYAMVCSRPDLSHAMSLVSRYMANPGKEHWKAVQWIFRYLRGTAD 841
Score = 55.8 bits (133), Expect(2) = 2e-21
Identities = 29/52 (55%), Positives = 36/52 (69%)
Frame = -1
Query: 156 VVRYVDSDYAVDLDRKRFLTRYIFTLFGSMIG*KAAL*CTVALSMTEAEYMA 1
+V YVDSD+A DLD++R LT Y+FT+ + KA L VA S TEAEYMA
Sbjct: 853 LVGYVDSDFAADLDKRRSLTGYVFTISSCAMSWKATLQPVVAQSTTEAEYMA 904
>emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera]
Length = 1643
Score = 68.2 bits (165), Expect(2) = 3e-21
Identities = 31/50 (62%), Positives = 40/50 (80%)
Frame = -2
Query: 353 VGSIMYAMVCIRLDISHAVSVVSRYMDRLGKVHLQAVKWILQYLRGTVDV 204
VGS+MYAMVC R D++ AVSVVSR+M GK H +AVKWI++YL+G+ V
Sbjct: 1420 VGSLMYAMVCTRPDLAFAVSVVSRFMSNPGKAHWEAVKWIMRYLKGSSSV 1469
Score = 60.5 bits (145), Expect(2) = 3e-21
Identities = 35/64 (54%), Positives = 43/64 (67%)
Frame = -1
Query: 192 LVYDGGNDPCGSVVRYVDSDYAVDLDRKRFLTRYIFTLFGSMIG*KAAL*CTVALSMTEA 13
LVY G D +V + DSD+ DL ++R LT YIFTLFG I +A+L TVALS TEA
Sbjct: 1471 LVY-GNGDVSSGLVGFTDSDHGGDLMKRRSLTCYIFTLFGCAISWRASLQPTVALSTTEA 1529
Query: 12 EYMA 1
EYM+
Sbjct: 1530 EYMS 1533