BLASTX nr result
ID: Cornus23_contig00014323
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cornus23_contig00014323
(272 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|KNA05433.1| hypothetical protein SOVF_190370 [Spinacia oleracea] 79 2e-12
ref|XP_010674845.1| PREDICTED: zinc finger CCCH domain-containin... 78 2e-12
ref|XP_006469941.1| PREDICTED: zinc finger CCCH domain-containin... 69 1e-09
ref|XP_010270055.1| PREDICTED: zinc finger CCCH domain-containin... 68 3e-09
ref|XP_009776617.1| PREDICTED: zinc finger CCCH domain-containin... 68 3e-09
ref|XP_002268612.1| PREDICTED: zinc finger CCCH domain-containin... 64 3e-08
ref|XP_002464063.1| hypothetical protein SORBIDRAFT_01g011590 [S... 63 1e-07
ref|XP_011098795.1| PREDICTED: zinc finger CCCH domain-containin... 62 2e-07
ref|XP_010426339.1| PREDICTED: zinc finger CCCH domain-containin... 62 2e-07
ref|XP_010426337.1| PREDICTED: zinc finger CCCH domain-containin... 62 2e-07
ref|XP_010426336.1| PREDICTED: zinc finger CCCH domain-containin... 62 2e-07
ref|XP_010515162.1| PREDICTED: zinc finger CCCH domain-containin... 62 2e-07
ref|XP_010515161.1| PREDICTED: zinc finger CCCH domain-containin... 62 2e-07
ref|XP_010503475.1| PREDICTED: zinc finger CCCH domain-containin... 62 2e-07
ref|XP_010503474.1| PREDICTED: zinc finger CCCH domain-containin... 62 2e-07
ref|XP_010503473.1| PREDICTED: zinc finger CCCH domain-containin... 62 2e-07
ref|XP_004501830.1| PREDICTED: zinc finger CCCH domain-containin... 62 2e-07
ref|XP_006291144.1| hypothetical protein CARUB_v10017261mg [Caps... 61 3e-07
ref|XP_006291143.1| hypothetical protein CARUB_v10017261mg [Caps... 61 3e-07
ref|NP_190414.1| zinc finger CCCH domain-containing protein 43 [... 61 4e-07
>gb|KNA05433.1| hypothetical protein SOVF_190370 [Spinacia oleracea]
Length = 516
Score = 78.6 bits (192), Expect = 2e-12
Identities = 41/90 (45%), Positives = 57/90 (63%)
Frame = -2
Query: 271 KTGDCKFKSACRFHHPKSQAPKLDVYVLSDKGLPIRLAPNYLEDTVRHNLSAPAAKSLAE 92
KTGDCK++SACR++HP S+ KL + +LS K + L D+ N A S +
Sbjct: 326 KTGDCKYRSACRYNHPVSRDSKLRLPLLSSKRPYSKSKNPELPDSFAGNPRKSGASSHQQ 385
Query: 91 KANIETQVEEFPERLGQPECEYFMKTGDCK 2
+ + Q E++PER GQPECE+FMKTG+CK
Sbjct: 386 Q---QLQNEQYPERPGQPECEFFMKTGNCK 412
>ref|XP_010674845.1| PREDICTED: zinc finger CCCH domain-containing protein 67-like [Beta
vulgaris subsp. vulgaris] gi|870862406|gb|KMT13611.1|
hypothetical protein BVRB_4g082120 [Beta vulgaris subsp.
vulgaris]
Length = 522
Score = 78.2 bits (191), Expect = 2e-12
Identities = 40/90 (44%), Positives = 54/90 (60%)
Frame = -2
Query: 271 KTGDCKFKSACRFHHPKSQAPKLDVYVLSDKGLPIRLAPNYLEDTVRHNLSAPAAKSLAE 92
KTGDCK+++ACR++HP S+ KL + LS KGL + + L + N P
Sbjct: 333 KTGDCKYRAACRYNHPVSRDSKLRLPPLSSKGLCSKSRNHELPNL---NSGNPRKNGTPS 389
Query: 91 KANIETQVEEFPERLGQPECEYFMKTGDCK 2
+ Q ++PER GQPECEYFMKTG+CK
Sbjct: 390 HQQQQLQNGQYPERPGQPECEYFMKTGNCK 419
>ref|XP_006469941.1| PREDICTED: zinc finger CCCH domain-containing protein 43-like
isoform X2 [Citrus sinensis]
Length = 334
Score = 68.9 bits (167), Expect = 1e-09
Identities = 40/99 (40%), Positives = 54/99 (54%), Gaps = 11/99 (11%)
Frame = -2
Query: 265 GDCKFKSACRFHHPKSQAPKLDVYV---------LSDKGLPIRLAPNYLEDTVRHNLSAP 113
G CK+ + C+F H K K Y+ L+ GLPIR+ Y + LS+P
Sbjct: 217 GGCKYGNTCKFSHSKE---KPQTYIKKSEKASPELNFLGLPIRVGSVYPQAKAELALSSP 273
Query: 112 AAKSLAEKANIET--QVEEFPERLGQPECEYFMKTGDCK 2
A +L + A+ T Q EFPER G+P C+YFMKTG+CK
Sbjct: 274 ALGNLTKTADTSTYHQFNEFPERPGEPLCDYFMKTGNCK 312
>ref|XP_010270055.1| PREDICTED: zinc finger CCCH domain-containing protein 57 isoform X3
[Nelumbo nucifera]
Length = 345
Score = 67.8 bits (164), Expect = 3e-09
Identities = 40/99 (40%), Positives = 57/99 (57%), Gaps = 9/99 (9%)
Frame = -2
Query: 271 KTGDCKFKSACRFHHPKSQAPKLDVYVLSDKGLPIR---LAP----NYLEDTVRHNLSAP 113
KTG CKF + C++HHP+ + V +L+ GLP+R L+P + L + +N S P
Sbjct: 105 KTGTCKFGATCKYHHPRDRHDTAHV-LLNILGLPMRQGTLSPISSTSVLGSNIAYN-SKP 162
Query: 112 AAKS--LAEKANIETQVEEFPERLGQPECEYFMKTGDCK 2
+S + + T V FPER QPEC+Y+MKTG CK
Sbjct: 163 QGESGSSGQVQLLSTSVPHFPERPDQPECQYYMKTGSCK 201
>ref|XP_009776617.1| PREDICTED: zinc finger CCCH domain-containing protein 32-like
isoform X2 [Nicotiana sylvestris]
Length = 338
Score = 67.8 bits (164), Expect = 3e-09
Identities = 39/120 (32%), Positives = 57/120 (47%), Gaps = 30/120 (25%)
Frame = -2
Query: 271 KTGDCKFKSACRFHHPKSQAPKLDVYVLSDKGLPIRLAP--------------------- 155
+TG CKF ++C+FHHPK+ L L+ G P+R P
Sbjct: 104 RTGTCKFGASCKFHHPKNLGGSLSNIPLNTHGYPVRPGPVSPALSPGAQPSAGVTSIYGI 163
Query: 154 NYLEDTVR---------HNLSAPAAKSLAEKANIETQVEEFPERLGQPECEYFMKTGDCK 2
+ L + H+ ++P++K+ EK+ FPER GQP C+Y+MKTGDCK
Sbjct: 164 SQLASSTHAFAGTYSPLHSAASPSSKTQKEKS--------FPERPGQPTCQYYMKTGDCK 215
>ref|XP_002268612.1| PREDICTED: zinc finger CCCH domain-containing protein 67 [Vitis
vinifera] gi|296081325|emb|CBI17707.3| unnamed protein
product [Vitis vinifera]
Length = 417
Score = 64.3 bits (155), Expect = 3e-08
Identities = 27/36 (75%), Positives = 31/36 (86%)
Frame = -2
Query: 271 KTGDCKFKSACRFHHPKSQAPKLDVYVLSDKGLPIR 164
KTGDCK+KSACR+HHPKS+ P L V LSDKGLP+R
Sbjct: 313 KTGDCKYKSACRYHHPKSRVPGLPVCALSDKGLPLR 348
Score = 58.9 bits (141), Expect = 1e-06
Identities = 29/58 (50%), Positives = 38/58 (65%), Gaps = 5/58 (8%)
Frame = -2
Query: 160 APNYLEDTVRHNLSAPAAKSLAEKANI-----ETQVEEFPERLGQPECEYFMKTGDCK 2
AP + + RH S L +K+++ +TQVEEFPER G+PEC+YFMKTGDCK
Sbjct: 261 APIHSQGMPRHLHSGLTLNKLMKKSDVSQHYEQTQVEEFPERPGKPECDYFMKTGDCK 318
>ref|XP_002464063.1| hypothetical protein SORBIDRAFT_01g011590 [Sorghum bicolor]
gi|241917917|gb|EER91061.1| hypothetical protein
SORBIDRAFT_01g011590 [Sorghum bicolor]
Length = 1390
Score = 62.8 bits (151), Expect = 1e-07
Identities = 33/90 (36%), Positives = 47/90 (52%)
Frame = -2
Query: 271 KTGDCKFKSACRFHHPKSQAPKLDVYVLSDKGLPIRLAPNYLEDTVRHNLSAPAAKSLAE 92
KTG CKF + C+FHHPK AP + P + +V N PAA++ +
Sbjct: 1203 KTGSCKFGANCKFHHPKDIAPSMQ-------------GPASPKRSVAANEHHPAARTTLQ 1249
Query: 91 KANIETQVEEFPERLGQPECEYFMKTGDCK 2
+ Q ++PER GQP+C Y+M+ G CK
Sbjct: 1250 DQMYQQQ--KYPERPGQPDCRYYMQFGKCK 1277
>ref|XP_011098795.1| PREDICTED: zinc finger CCCH domain-containing protein 67-like
[Sesamum indicum]
Length = 403
Score = 62.0 bits (149), Expect = 2e-07
Identities = 25/50 (50%), Positives = 35/50 (70%)
Frame = -2
Query: 271 KTGDCKFKSACRFHHPKSQAPKLDVYVLSDKGLPIRLAPNYLEDTVRHNL 122
KTGDCKF+S CRFHHPK++ PK++ +L++ GLP+R + RH L
Sbjct: 315 KTGDCKFRSTCRFHHPKNRTPKVEECILNENGLPLRPGRSICRHYERHGL 364
Score = 60.5 bits (145), Expect = 5e-07
Identities = 26/44 (59%), Positives = 32/44 (72%)
Frame = -2
Query: 133 RHNLSAPAAKSLAEKANIETQVEEFPERLGQPECEYFMKTGDCK 2
R++ +AP A K + QV+EFPER GQPEC+YFMKTGDCK
Sbjct: 277 RNSCTAPTANGCVRKMDGSMQVDEFPERPGQPECDYFMKTGDCK 320
>ref|XP_010426339.1| PREDICTED: zinc finger CCCH domain-containing protein 43-like
isoform X3 [Camelina sativa]
Length = 428
Score = 62.0 bits (149), Expect = 2e-07
Identities = 25/36 (69%), Positives = 30/36 (83%)
Frame = -2
Query: 271 KTGDCKFKSACRFHHPKSQAPKLDVYVLSDKGLPIR 164
KTGDCKFK CR+HHPK++ PKL Y L+DKGLP+R
Sbjct: 337 KTGDCKFKFNCRYHHPKNRLPKLPPYALNDKGLPLR 372
>ref|XP_010426337.1| PREDICTED: zinc finger CCCH domain-containing protein 43-like
isoform X2 [Camelina sativa]
Length = 451
Score = 62.0 bits (149), Expect = 2e-07
Identities = 25/36 (69%), Positives = 30/36 (83%)
Frame = -2
Query: 271 KTGDCKFKSACRFHHPKSQAPKLDVYVLSDKGLPIR 164
KTGDCKFK CR+HHPK++ PKL Y L+DKGLP+R
Sbjct: 360 KTGDCKFKFNCRYHHPKNRLPKLPPYALNDKGLPLR 395
>ref|XP_010426336.1| PREDICTED: zinc finger CCCH domain-containing protein 43-like
isoform X1 [Camelina sativa]
Length = 455
Score = 62.0 bits (149), Expect = 2e-07
Identities = 25/36 (69%), Positives = 30/36 (83%)
Frame = -2
Query: 271 KTGDCKFKSACRFHHPKSQAPKLDVYVLSDKGLPIR 164
KTGDCKFK CR+HHPK++ PKL Y L+DKGLP+R
Sbjct: 364 KTGDCKFKFNCRYHHPKNRLPKLPPYALNDKGLPLR 399
>ref|XP_010515162.1| PREDICTED: zinc finger CCCH domain-containing protein 43-like
isoform X2 [Camelina sativa]
Length = 445
Score = 62.0 bits (149), Expect = 2e-07
Identities = 25/36 (69%), Positives = 30/36 (83%)
Frame = -2
Query: 271 KTGDCKFKSACRFHHPKSQAPKLDVYVLSDKGLPIR 164
KTGDCKFK CR+HHPK++ PKL Y L+DKGLP+R
Sbjct: 354 KTGDCKFKFNCRYHHPKNRLPKLPPYALNDKGLPLR 389
>ref|XP_010515161.1| PREDICTED: zinc finger CCCH domain-containing protein 43-like
isoform X1 [Camelina sativa]
Length = 449
Score = 62.0 bits (149), Expect = 2e-07
Identities = 25/36 (69%), Positives = 30/36 (83%)
Frame = -2
Query: 271 KTGDCKFKSACRFHHPKSQAPKLDVYVLSDKGLPIR 164
KTGDCKFK CR+HHPK++ PKL Y L+DKGLP+R
Sbjct: 358 KTGDCKFKFNCRYHHPKNRLPKLPPYALNDKGLPLR 393
>ref|XP_010503475.1| PREDICTED: zinc finger CCCH domain-containing protein 43-like
isoform X3 [Camelina sativa]
Length = 429
Score = 62.0 bits (149), Expect = 2e-07
Identities = 25/36 (69%), Positives = 30/36 (83%)
Frame = -2
Query: 271 KTGDCKFKSACRFHHPKSQAPKLDVYVLSDKGLPIR 164
KTGDCKFK CR+HHPK++ PKL Y L+DKGLP+R
Sbjct: 337 KTGDCKFKFNCRYHHPKNRLPKLPPYALNDKGLPLR 372
>ref|XP_010503474.1| PREDICTED: zinc finger CCCH domain-containing protein 43-like
isoform X2 [Camelina sativa]
Length = 455
Score = 62.0 bits (149), Expect = 2e-07
Identities = 25/36 (69%), Positives = 30/36 (83%)
Frame = -2
Query: 271 KTGDCKFKSACRFHHPKSQAPKLDVYVLSDKGLPIR 164
KTGDCKFK CR+HHPK++ PKL Y L+DKGLP+R
Sbjct: 363 KTGDCKFKFNCRYHHPKNRLPKLPPYALNDKGLPLR 398
>ref|XP_010503473.1| PREDICTED: zinc finger CCCH domain-containing protein 43-like
isoform X1 [Camelina sativa]
Length = 456
Score = 62.0 bits (149), Expect = 2e-07
Identities = 25/36 (69%), Positives = 30/36 (83%)
Frame = -2
Query: 271 KTGDCKFKSACRFHHPKSQAPKLDVYVLSDKGLPIR 164
KTGDCKFK CR+HHPK++ PKL Y L+DKGLP+R
Sbjct: 364 KTGDCKFKFNCRYHHPKNRLPKLPPYALNDKGLPLR 399
>ref|XP_004501830.1| PREDICTED: zinc finger CCCH domain-containing protein 67-like
[Cicer arietinum]
Length = 472
Score = 61.6 bits (148), Expect = 2e-07
Identities = 30/58 (51%), Positives = 37/58 (63%), Gaps = 2/58 (3%)
Frame = -2
Query: 271 KTGDCKFKSACRFHHPKSQAPKLDVYVLSDKGLPIRLAPNYLEDTVRHNLS--APAAK 104
KTGDCKFKS C+FHHPKS+ +L +LSDKGLP+R N R+ + PA K
Sbjct: 371 KTGDCKFKSHCKFHHPKSRIARLPPIILSDKGLPLRPDQNVCTHYSRYGICKFGPACK 428
>ref|XP_006291144.1| hypothetical protein CARUB_v10017261mg [Capsella rubella]
gi|482559851|gb|EOA24042.1| hypothetical protein
CARUB_v10017261mg [Capsella rubella]
Length = 441
Score = 61.2 bits (147), Expect = 3e-07
Identities = 26/50 (52%), Positives = 34/50 (68%)
Frame = -2
Query: 271 KTGDCKFKSACRFHHPKSQAPKLDVYVLSDKGLPIRLAPNYLEDTVRHNL 122
KTGDCKFK C++HHPK++ PKL Y L+DKGLP+R N R+ +
Sbjct: 350 KTGDCKFKFNCKYHHPKNRLPKLPPYALNDKGLPLRPDQNICTHYSRYGI 399
>ref|XP_006291143.1| hypothetical protein CARUB_v10017261mg [Capsella rubella]
gi|482559850|gb|EOA24041.1| hypothetical protein
CARUB_v10017261mg [Capsella rubella]
Length = 418
Score = 61.2 bits (147), Expect = 3e-07
Identities = 26/50 (52%), Positives = 34/50 (68%)
Frame = -2
Query: 271 KTGDCKFKSACRFHHPKSQAPKLDVYVLSDKGLPIRLAPNYLEDTVRHNL 122
KTGDCKFK C++HHPK++ PKL Y L+DKGLP+R N R+ +
Sbjct: 327 KTGDCKFKFNCKYHHPKNRLPKLPPYALNDKGLPLRPDQNICTHYSRYGI 376
>ref|NP_190414.1| zinc finger CCCH domain-containing protein 43 [Arabidopsis
thaliana] gi|62901491|sp|Q9STM4.1|C3H43_ARATH RecName:
Full=Zinc finger CCCH domain-containing protein 43;
Short=AtC3H43; AltName: Full=Zinc finger CCCH
domain-containing protein ZFN-like 6
gi|4678344|emb|CAB41154.1| putative protein [Arabidopsis
thaliana] gi|194272236|gb|ACF37203.1| At3g48440
[Arabidopsis thaliana] gi|332644896|gb|AEE78417.1| zinc
finger CCCH domain-containing protein 43 [Arabidopsis
thaliana]
Length = 448
Score = 60.8 bits (146), Expect = 4e-07
Identities = 24/36 (66%), Positives = 30/36 (83%)
Frame = -2
Query: 271 KTGDCKFKSACRFHHPKSQAPKLDVYVLSDKGLPIR 164
KTGDCKFK C++HHPK++ PKL Y L+DKGLP+R
Sbjct: 357 KTGDCKFKFNCKYHHPKNRLPKLPPYALNDKGLPLR 392