BLASTX nr result

ID: Cornus23_contig00014038 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00014038
         (708 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010276042.1| PREDICTED: DNA polymerase I A, chloroplastic...    61   8e-07
ref|XP_010276041.1| PREDICTED: DNA polymerase I A, chloroplastic...    61   8e-07
ref|XP_010276040.1| PREDICTED: DNA polymerase I A, chloroplastic...    61   8e-07
ref|XP_010276038.1| PREDICTED: DNA polymerase I A, chloroplastic...    61   8e-07
ref|XP_010267695.1| PREDICTED: DNA polymerase I A, chloroplastic...    61   8e-07

>ref|XP_010276042.1| PREDICTED: DNA polymerase I A, chloroplastic/mitochondrial-like
           isoform X4 [Nelumbo nucifera]
          Length = 1089

 Score = 60.8 bits (146), Expect = 8e-07
 Identities = 52/164 (31%), Positives = 78/164 (47%), Gaps = 7/164 (4%)
 Frame = -1

Query: 516 MAMGAFSQNSPFKPSCPS-FWLAH*CPQXXXXXXXXSRPLWACP--YKALHRQEVYRLRS 346
           MAMG  +Q+ P KP   S FW +  C +             AC    K+  R+E + ++ 
Sbjct: 1   MAMGVSTQSGPLKPCSSSPFWSSPSCRRSASMTSSPH----ACSGSSKSFQRKEFHSVQY 56

Query: 345 ANCLFHNVIVFSSSRQFKRSTKYNT--VLFSENHRYDDMDHPFPF--WKLVVRSESRSPS 178
            N    N     S  QFKR    +T  V+  +         P+P+  W+L VR++     
Sbjct: 57  ENVC--NCNFTGSFIQFKRGLSNSTGSVITKDGACERKRCCPYPYYCWRLEVRTQMSHSP 114

Query: 177 TSAAQIFPHLLNKIPPEGKHFSNRLVNKQKIEKRNQQVPRHLHG 46
           TS+A++FP+  N+I  E K  + RLVN +  E+  +Q PRH HG
Sbjct: 115 TSSARMFPYYSNQIDSERKLQAVRLVNMRNSEEEEKQTPRH-HG 157


>ref|XP_010276041.1| PREDICTED: DNA polymerase I A, chloroplastic/mitochondrial-like
           isoform X3 [Nelumbo nucifera]
          Length = 1121

 Score = 60.8 bits (146), Expect = 8e-07
 Identities = 52/164 (31%), Positives = 78/164 (47%), Gaps = 7/164 (4%)
 Frame = -1

Query: 516 MAMGAFSQNSPFKPSCPS-FWLAH*CPQXXXXXXXXSRPLWACP--YKALHRQEVYRLRS 346
           MAMG  +Q+ P KP   S FW +  C +             AC    K+  R+E + ++ 
Sbjct: 1   MAMGVSTQSGPLKPCSSSPFWSSPSCRRSASMTSSPH----ACSGSSKSFQRKEFHSVQY 56

Query: 345 ANCLFHNVIVFSSSRQFKRSTKYNT--VLFSENHRYDDMDHPFPF--WKLVVRSESRSPS 178
            N    N     S  QFKR    +T  V+  +         P+P+  W+L VR++     
Sbjct: 57  ENVC--NCNFTGSFIQFKRGLSNSTGSVITKDGACERKRCCPYPYYCWRLEVRTQMSHSP 114

Query: 177 TSAAQIFPHLLNKIPPEGKHFSNRLVNKQKIEKRNQQVPRHLHG 46
           TS+A++FP+  N+I  E K  + RLVN +  E+  +Q PRH HG
Sbjct: 115 TSSARMFPYYSNQIDSERKLQAVRLVNMRNSEEEEKQTPRH-HG 157


>ref|XP_010276040.1| PREDICTED: DNA polymerase I A, chloroplastic/mitochondrial-like
           isoform X2 [Nelumbo nucifera]
          Length = 1185

 Score = 60.8 bits (146), Expect = 8e-07
 Identities = 52/164 (31%), Positives = 78/164 (47%), Gaps = 7/164 (4%)
 Frame = -1

Query: 516 MAMGAFSQNSPFKPSCPS-FWLAH*CPQXXXXXXXXSRPLWACP--YKALHRQEVYRLRS 346
           MAMG  +Q+ P KP   S FW +  C +             AC    K+  R+E + ++ 
Sbjct: 1   MAMGVSTQSGPLKPCSSSPFWSSPSCRRSASMTSSPH----ACSGSSKSFQRKEFHSVQY 56

Query: 345 ANCLFHNVIVFSSSRQFKRSTKYNT--VLFSENHRYDDMDHPFPF--WKLVVRSESRSPS 178
            N    N     S  QFKR    +T  V+  +         P+P+  W+L VR++     
Sbjct: 57  ENVC--NCNFTGSFIQFKRGLSNSTGSVITKDGACERKRCCPYPYYCWRLEVRTQMSHSP 114

Query: 177 TSAAQIFPHLLNKIPPEGKHFSNRLVNKQKIEKRNQQVPRHLHG 46
           TS+A++FP+  N+I  E K  + RLVN +  E+  +Q PRH HG
Sbjct: 115 TSSARMFPYYSNQIDSERKLQAVRLVNMRNSEEEEKQTPRH-HG 157


>ref|XP_010276038.1| PREDICTED: DNA polymerase I A, chloroplastic/mitochondrial-like
           isoform X1 [Nelumbo nucifera]
          Length = 1217

 Score = 60.8 bits (146), Expect = 8e-07
 Identities = 52/164 (31%), Positives = 78/164 (47%), Gaps = 7/164 (4%)
 Frame = -1

Query: 516 MAMGAFSQNSPFKPSCPS-FWLAH*CPQXXXXXXXXSRPLWACP--YKALHRQEVYRLRS 346
           MAMG  +Q+ P KP   S FW +  C +             AC    K+  R+E + ++ 
Sbjct: 1   MAMGVSTQSGPLKPCSSSPFWSSPSCRRSASMTSSPH----ACSGSSKSFQRKEFHSVQY 56

Query: 345 ANCLFHNVIVFSSSRQFKRSTKYNT--VLFSENHRYDDMDHPFPF--WKLVVRSESRSPS 178
            N    N     S  QFKR    +T  V+  +         P+P+  W+L VR++     
Sbjct: 57  ENVC--NCNFTGSFIQFKRGLSNSTGSVITKDGACERKRCCPYPYYCWRLEVRTQMSHSP 114

Query: 177 TSAAQIFPHLLNKIPPEGKHFSNRLVNKQKIEKRNQQVPRHLHG 46
           TS+A++FP+  N+I  E K  + RLVN +  E+  +Q PRH HG
Sbjct: 115 TSSARMFPYYSNQIDSERKLQAVRLVNMRNSEEEEKQTPRH-HG 157


>ref|XP_010267695.1| PREDICTED: DNA polymerase I A, chloroplastic/mitochondrial [Nelumbo
           nucifera]
          Length = 1182

 Score = 60.8 bits (146), Expect = 8e-07
 Identities = 50/168 (29%), Positives = 77/168 (45%), Gaps = 11/168 (6%)
 Frame = -1

Query: 516 MAMGAFSQNSPFKPSCPS-FWLAH*CPQXXXXXXXXSRP-LWACPYKALHRQEVYRLRSA 343
           MA+G  +Q+   KP  P   WL+   P         S P  ++   KALHR+E++ L+  
Sbjct: 1   MAVGVSTQSGSLKPCFPPPSWLS---PSYRRFTSMASSPRAFSASSKALHRKEIFSLQHE 57

Query: 342 NCLFHNVIVFSSSRQFKR---------STKYNTVLFSENHRYDDMDHPFPFWKLVVRSES 190
           N  F N+    S  QFKR         + K +T +F  + R     + +P WK     + 
Sbjct: 58  NGCFCNIT--GSYHQFKRGLSNSSGPYARKDDTCIFDLDGRKHYYPYTYPHWKY----QM 111

Query: 189 RSPSTSAAQIFPHLLNKIPPEGKHFSNRLVNKQKIEKRNQQVPRHLHG 46
           ++P  S A++ PH  N+   EGK  S  L     +E   +Q P +L+G
Sbjct: 112 QNPFVSPARMHPHHPNQFGSEGKVLSGGLAKMAGVEGGEKQTPGNLYG 159


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