BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00013831
         (2622 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACC60969.1| phytochrome A [Vitis riparia]                         1381   0.0  
ref|XP_002278610.1| PREDICTED: phytochrome A1 [Vitis vinifera] g...  1381   0.0  
gb|AHZ89697.1| phytochrome A [Dimocarpus longan]                     1355   0.0  
ref|XP_007031301.1| Phytochrome A [Theobroma cacao] gi|508719906...  1351   0.0  
ref|XP_006423945.1| hypothetical protein CICLE_v10027712mg [Citr...  1340   0.0  
ref|XP_008246343.1| PREDICTED: phytochrome A [Prunus mume]           1338   0.0  
ref|XP_009622127.1| PREDICTED: phytochrome A1 [Nicotiana tomento...  1337   0.0  
gb|KDO56362.1| hypothetical protein CISIN_1g001235mg [Citrus sin...  1337   0.0  
ref|XP_006339917.1| PREDICTED: type A phytochrome [Solanum tuber...  1334   0.0  
ref|XP_010094926.1| Phytochrome type A [Morus notabilis] gi|5878...  1330   0.0  
ref|NP_001234490.1| Phytochrome A [Solanum lycopersicum] gi|9378...  1330   0.0  
ref|XP_009769439.1| PREDICTED: phytochrome A1 [Nicotiana sylvest...  1330   0.0  
ref|XP_002318913.1| phytochrome A family protein [Populus tricho...  1330   0.0  
ref|XP_010247866.1| PREDICTED: phytochrome A [Nelumbo nucifera]      1328   0.0  
ref|NP_001275384.1| phytochrome A [Solanum tuberosum] gi|7657416...  1328   0.0  
ref|XP_012088799.1| PREDICTED: phytochrome A [Jatropha curcas] g...  1326   0.0  
sp|P33530.1|PHYA1_TOBAC RecName: Full=Phytochrome A1 gi|297478|e...  1326   0.0  
ref|XP_011092216.1| PREDICTED: phytochrome A [Sesamum indicum] g...  1324   0.0  
ref|XP_011023900.1| PREDICTED: phytochrome A [Populus euphratica]    1322   0.0  
gb|AGT50254.1| phytochrome A2 [Ipomoea batatas]                      1322   0.0  

>gb|ACC60969.1| phytochrome A [Vitis riparia]
          Length = 1124

 Score = 1381 bits (3575), Expect = 0.0
 Identities = 681/838 (81%), Positives = 748/838 (89%)
 Frame = -3

Query: 2620 KNKVRMICDCNAKNVKVLQDEKLPLDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVV 2441
            KNKVRMICDC AK+++VLQDEKLP DLTLCGSTLRAPHSCH+QYMENMNSIASLVMAVVV
Sbjct: 283  KNKVRMICDCRAKHIQVLQDEKLPFDLTLCGSTLRAPHSCHVQYMENMNSIASLVMAVVV 342

Query: 2440 NXXXXXXXXXXXXXAQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEFEL 2261
            N              QKRKRLWGLVVCH+TTPRFVPFPLRYACEFLAQVFAIHVNKE EL
Sbjct: 343  NDGDEEGESSNSGQPQKRKRLWGLVVCHHTTPRFVPFPLRYACEFLAQVFAIHVNKELEL 402

Query: 2260 ENQIIEKNMLRTQTLLCDMLMRDAPLGIVSQSPNIMDLVKCDGAALFYKNKIYRLGVTPS 2081
            E+QI+EKN+LRTQTLLCDMLMRDAPLGIVSQSPN+MDLVKCDGAAL YKNK++RLG+TPS
Sbjct: 403  ESQILEKNILRTQTLLCDMLMRDAPLGIVSQSPNVMDLVKCDGAALLYKNKVWRLGITPS 462

Query: 2080 DFHLHDVVSWLSEFHMDSTGLSTDSLYDAGYPGALALGSVVCGMAAVRINSKDMLFWFRS 1901
            DF LHD+ SWLSE+HMDSTGLSTDSLYDAGYPGALALG  VCGMAAV+I SKD LFWFRS
Sbjct: 463  DFQLHDICSWLSEYHMDSTGLSTDSLYDAGYPGALALGDAVCGMAAVKITSKDTLFWFRS 522

Query: 1900 HTAAEIRWGGAKHEPGEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILR 1721
            HTAAE+RWGGAKHEPGEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILR
Sbjct: 523  HTAAEVRWGGAKHEPGEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILR 582

Query: 1720 NAFKDADAIDLNTNAIHKQLNDLKIAGMQELKAVTGEMVRLIETATAPILAVDVDGLVNG 1541
            NAFKD++A+D+NTNAIH +LNDLKI GMQEL+AVT EMVRLIETA+ PILAVDVDGLVNG
Sbjct: 583  NAFKDSEAMDVNTNAIHTKLNDLKIEGMQELEAVTSEMVRLIETASVPILAVDVDGLVNG 642

Query: 1540 WNTKIAELTGLPINRALGRHLLTLVEDSSAGIVKKMLHLAIQGKEEQNIQFEIKTHGSRS 1361
            WNTKI+ELT LP+++A+G HLLTLVEDSSA  VKKMLHLA+QG+EEQN+QFEIKTHGS+ 
Sbjct: 643  WNTKISELTSLPVDKAIGMHLLTLVEDSSADTVKKMLHLALQGQEEQNVQFEIKTHGSKR 702

Query: 1360 DSGPISLLVNACASKDLQENVVGVCFVAQDITGQRNVMDKFTRIEGDYKAIVQNPNPLIP 1181
            DSGPISL+VNACAS+DL ENVVGVCFVAQDIT Q+ VMDKFTRIEGDYKAIVQNPNPLIP
Sbjct: 703  DSGPISLVVNACASRDLDENVVGVCFVAQDITSQKTVMDKFTRIEGDYKAIVQNPNPLIP 762

Query: 1180 PIFGADEFGWCSEWNAAMKKVSGWDREEVIDKMLLGEVFGINTAYCRLKNREAFVNLGIV 1001
            PIFG DEFGWCSEWN AM K+SGW+REEV+DKMLLGEVFG + A CRLKNREAFV LGIV
Sbjct: 763  PIFGTDEFGWCSEWNPAMVKLSGWNREEVMDKMLLGEVFGTHMACCRLKNREAFVGLGIV 822

Query: 1000 LNNAMTGQESEKISFGFFARSGKYIECLLCVSKKLDGEGAVTGVFCFXXXXXXXXXXXLH 821
            LN+ MTG+ESEK+SFGFF++SGKY+ECLL VSKKLD EGAVTGVFCF           LH
Sbjct: 823  LNSVMTGRESEKVSFGFFSKSGKYVECLLSVSKKLDREGAVTGVFCFLQLASQELQQALH 882

Query: 820  VQRLSEQTALKRLKVLSYIRRQIKNPLSGIIFSRKMMEGTDLGEEQKQLLHTSAQCQRQI 641
            +QRLSEQTALKRLK L+YI+RQIKNPLSGIIFSRKMME TDLGEEQ+Q+LHTSAQCQRQ+
Sbjct: 883  IQRLSEQTALKRLKALAYIKRQIKNPLSGIIFSRKMMEDTDLGEEQQQILHTSAQCQRQL 942

Query: 640  NKXXXXXXXXXXXDGYLDLEMVEFTLNEVVVASISQVMLKSNGKGIRIVNDMAEEIISEI 461
            +K           +GYLDLEMVEFTL EV+VASISQVM+KSNGKGI+IVND  E I++E 
Sbjct: 943  SKILDDHDLDSIIEGYLDLEMVEFTLREVLVASISQVMIKSNGKGIQIVNDAEEGIMTET 1002

Query: 460  LYGDSLRLQQVLADFLLVSINYMSNGGQLGIAASLAKDRLGESVQLAHAEFRITHAGGGV 281
            LYGD LRLQQVLADFLL+S+N+   GGQL +AASL KDRLGESV L H E RITHAG GV
Sbjct: 1003 LYGDGLRLQQVLADFLLISVNFTPGGGQLSVAASLIKDRLGESVHLVHLELRITHAGNGV 1062

Query: 280  PEELLSQMFGSDGDTDEEGISLLISRKLVKLMNGDVQYLREAGKSTFIISVELAATNK 107
            PE+LL+QMFG++GD  EEGISLLISRKLVKLMNGDVQYLREAGKSTFIIS+ELAA  K
Sbjct: 1063 PEQLLNQMFGNNGDASEEGISLLISRKLVKLMNGDVQYLREAGKSTFIISIELAAARK 1120


>ref|XP_002278610.1| PREDICTED: phytochrome A1 [Vitis vinifera]
            gi|731416116|ref|XP_010659783.1| PREDICTED: phytochrome
            A1 [Vitis vinifera] gi|147838424|emb|CAN76586.1|
            hypothetical protein VITISV_020287 [Vitis vinifera]
            gi|183239014|gb|ACC60965.1| phytochrome A [Vitis
            vinifera] gi|296089871|emb|CBI39690.3| unnamed protein
            product [Vitis vinifera]
          Length = 1124

 Score = 1381 bits (3575), Expect = 0.0
 Identities = 681/838 (81%), Positives = 748/838 (89%)
 Frame = -3

Query: 2620 KNKVRMICDCNAKNVKVLQDEKLPLDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVV 2441
            KNKVRMICDC AK+++VLQDEKLP DLTLCGSTLRAPHSCH+QYMENMNSIASLVMAVVV
Sbjct: 283  KNKVRMICDCRAKHIQVLQDEKLPFDLTLCGSTLRAPHSCHVQYMENMNSIASLVMAVVV 342

Query: 2440 NXXXXXXXXXXXXXAQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEFEL 2261
            N              QKRKRLWGLVVCH+TTPRFVPFPLRYACEFLAQVFAIHVNKE EL
Sbjct: 343  NDGDEEGESSNSGQPQKRKRLWGLVVCHHTTPRFVPFPLRYACEFLAQVFAIHVNKELEL 402

Query: 2260 ENQIIEKNMLRTQTLLCDMLMRDAPLGIVSQSPNIMDLVKCDGAALFYKNKIYRLGVTPS 2081
            E+QI+EKN+LRTQTLLCDMLMRDAPLGIVSQSPN+MDLVKCDGAAL YKNK++RLG+TPS
Sbjct: 403  ESQILEKNILRTQTLLCDMLMRDAPLGIVSQSPNVMDLVKCDGAALLYKNKVWRLGITPS 462

Query: 2080 DFHLHDVVSWLSEFHMDSTGLSTDSLYDAGYPGALALGSVVCGMAAVRINSKDMLFWFRS 1901
            DF LHD+ SWLSE+HMDSTGLSTDSLYDAGYPGALALG  VCGMAAV+I SKD LFWFRS
Sbjct: 463  DFQLHDICSWLSEYHMDSTGLSTDSLYDAGYPGALALGDAVCGMAAVKITSKDTLFWFRS 522

Query: 1900 HTAAEIRWGGAKHEPGEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILR 1721
            HTAAE+RWGGAKHEPGEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILR
Sbjct: 523  HTAAEVRWGGAKHEPGEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILR 582

Query: 1720 NAFKDADAIDLNTNAIHKQLNDLKIAGMQELKAVTGEMVRLIETATAPILAVDVDGLVNG 1541
            NAFKD++A+D+NTNAIH +LNDLKI GMQEL+AVT EMVRLIETA+ PILAVDVDGLVNG
Sbjct: 583  NAFKDSEAMDVNTNAIHTKLNDLKIEGMQELEAVTSEMVRLIETASVPILAVDVDGLVNG 642

Query: 1540 WNTKIAELTGLPINRALGRHLLTLVEDSSAGIVKKMLHLAIQGKEEQNIQFEIKTHGSRS 1361
            WNTKI+ELT LP+++A+G HLLTLVEDSSA  VKKMLHLA+QG+EEQN+QFEIKTHGS+ 
Sbjct: 643  WNTKISELTSLPVDKAIGMHLLTLVEDSSADTVKKMLHLALQGQEEQNVQFEIKTHGSKR 702

Query: 1360 DSGPISLLVNACASKDLQENVVGVCFVAQDITGQRNVMDKFTRIEGDYKAIVQNPNPLIP 1181
            DSGPISL+VNACAS+DL ENVVGVCFVAQDIT Q+ VMDKFTRIEGDYKAIVQNPNPLIP
Sbjct: 703  DSGPISLVVNACASRDLHENVVGVCFVAQDITSQKTVMDKFTRIEGDYKAIVQNPNPLIP 762

Query: 1180 PIFGADEFGWCSEWNAAMKKVSGWDREEVIDKMLLGEVFGINTAYCRLKNREAFVNLGIV 1001
            PIFG DEFGWCSEWN AM K+SGW+REEV+DKMLLGEVFG + A CRLKNREAFV LGIV
Sbjct: 763  PIFGTDEFGWCSEWNPAMVKLSGWNREEVMDKMLLGEVFGTHMACCRLKNREAFVGLGIV 822

Query: 1000 LNNAMTGQESEKISFGFFARSGKYIECLLCVSKKLDGEGAVTGVFCFXXXXXXXXXXXLH 821
            LN+ MTG+ESEK+SFGFF++SGKY+ECLL VSKKLD EGAVTGVFCF           LH
Sbjct: 823  LNSVMTGRESEKVSFGFFSKSGKYVECLLSVSKKLDREGAVTGVFCFLQLASQELQQALH 882

Query: 820  VQRLSEQTALKRLKVLSYIRRQIKNPLSGIIFSRKMMEGTDLGEEQKQLLHTSAQCQRQI 641
            +QRLSEQTALKRLK L+YI+RQIKNPLSGIIFSRKMME TDLGEEQ+Q+LHTSAQCQRQ+
Sbjct: 883  IQRLSEQTALKRLKALAYIKRQIKNPLSGIIFSRKMMEDTDLGEEQQQILHTSAQCQRQL 942

Query: 640  NKXXXXXXXXXXXDGYLDLEMVEFTLNEVVVASISQVMLKSNGKGIRIVNDMAEEIISEI 461
            +K           +GYLDLEMVEFTL EV+VASISQVM+KSNGKGI+IVND  E I++E 
Sbjct: 943  SKILDDHDLDSIIEGYLDLEMVEFTLREVLVASISQVMIKSNGKGIQIVNDAEEGIMTET 1002

Query: 460  LYGDSLRLQQVLADFLLVSINYMSNGGQLGIAASLAKDRLGESVQLAHAEFRITHAGGGV 281
            LYGD LRLQQVLADFLL+S+N+   GGQL +AASL KDRLGESV L H E RITHAG GV
Sbjct: 1003 LYGDGLRLQQVLADFLLISVNFTPGGGQLSVAASLIKDRLGESVHLVHLELRITHAGNGV 1062

Query: 280  PEELLSQMFGSDGDTDEEGISLLISRKLVKLMNGDVQYLREAGKSTFIISVELAATNK 107
            PE+LL+QMFG++GD  EEGISLLISRKLVKLMNGDVQYLREAGKSTFIIS+ELAA  K
Sbjct: 1063 PEQLLNQMFGNNGDASEEGISLLISRKLVKLMNGDVQYLREAGKSTFIISIELAAARK 1120


>gb|AHZ89697.1| phytochrome A [Dimocarpus longan]
          Length = 1124

 Score = 1355 bits (3506), Expect = 0.0
 Identities = 664/838 (79%), Positives = 745/838 (88%)
 Frame = -3

Query: 2620 KNKVRMICDCNAKNVKVLQDEKLPLDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVV 2441
            KNKVR+I DC+AK+VKVLQDEKLP+DLTLCGSTLRAPH+CHLQYMENMNSIASLVMAVVV
Sbjct: 284  KNKVRIIVDCHAKHVKVLQDEKLPVDLTLCGSTLRAPHTCHLQYMENMNSIASLVMAVVV 343

Query: 2440 NXXXXXXXXXXXXXAQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEFEL 2261
            N               K+KRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE EL
Sbjct: 344  NDGDEEGDSPNSAPPLKQKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELEL 403

Query: 2260 ENQIIEKNMLRTQTLLCDMLMRDAPLGIVSQSPNIMDLVKCDGAALFYKNKIYRLGVTPS 2081
            ENQIIEKN+LRTQTLLCDMLMRDAPLGIVSQSPNIMDLVKCDGAAL Y NKI+RLGVTPS
Sbjct: 404  ENQIIEKNILRTQTLLCDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYNNKIWRLGVTPS 463

Query: 2080 DFHLHDVVSWLSEFHMDSTGLSTDSLYDAGYPGALALGSVVCGMAAVRINSKDMLFWFRS 1901
            +F L D+ SWL E+HMDSTGLSTDSLYDAG+PGALALG VVCGMAAVRI+SKD++FWFRS
Sbjct: 464  EFQLQDIASWLFEYHMDSTGLSTDSLYDAGFPGALALGDVVCGMAAVRISSKDVIFWFRS 523

Query: 1900 HTAAEIRWGGAKHEPGEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILR 1721
            HTA+ IRWGGAKHEPGEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILR
Sbjct: 524  HTASAIRWGGAKHEPGEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILR 583

Query: 1720 NAFKDADAIDLNTNAIHKQLNDLKIAGMQELKAVTGEMVRLIETATAPILAVDVDGLVNG 1541
            NAFKD +  D+N  +IH +LNDLK+ GM+EL+AVT EMVRLIETAT PILAVDVDGLVNG
Sbjct: 584  NAFKDVETEDVNNKSIHSKLNDLKLEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNG 643

Query: 1540 WNTKIAELTGLPINRALGRHLLTLVEDSSAGIVKKMLHLAIQGKEEQNIQFEIKTHGSRS 1361
            WNTKIAELTGLP+++A+G+H L+LVEDSS  IV+KMLHLA+QG EE++++FEIKTHG RS
Sbjct: 644  WNTKIAELTGLPVDKAIGKHFLSLVEDSSVDIVRKMLHLALQGHEEKDVEFEIKTHGCRS 703

Query: 1360 DSGPISLLVNACASKDLQENVVGVCFVAQDITGQRNVMDKFTRIEGDYKAIVQNPNPLIP 1181
            D+GPISL+VNACAS+DL ENVVGVCFVAQDITGQ+ VMDKFTRIEGDYKAIVQNPNPLIP
Sbjct: 704  DAGPISLIVNACASRDLHENVVGVCFVAQDITGQKTVMDKFTRIEGDYKAIVQNPNPLIP 763

Query: 1180 PIFGADEFGWCSEWNAAMKKVSGWDREEVIDKMLLGEVFGINTAYCRLKNREAFVNLGIV 1001
            PIFG DEFGWCSEWN AM K++GW REEV+DK+LL EVFG N A CRLKN+E FVNLGIV
Sbjct: 764  PIFGVDEFGWCSEWNPAMAKLTGWKREEVVDKLLLAEVFGTNMACCRLKNQECFVNLGIV 823

Query: 1000 LNNAMTGQESEKISFGFFARSGKYIECLLCVSKKLDGEGAVTGVFCFXXXXXXXXXXXLH 821
            LNNAM+GQ+ EK+ FGFFAR+GKY++CLLC+SKKLDGEGA+TGVFCF           LH
Sbjct: 824  LNNAMSGQDPEKVPFGFFARNGKYVDCLLCLSKKLDGEGAITGVFCFLQLASHELQQALH 883

Query: 820  VQRLSEQTALKRLKVLSYIRRQIKNPLSGIIFSRKMMEGTDLGEEQKQLLHTSAQCQRQI 641
            +QRLSEQTA+KRLK L+YI+RQI+NPLSGIIFSRKM+EGT+LG EQKQLLHTSAQCQRQ+
Sbjct: 884  IQRLSEQTAVKRLKALAYIKRQIRNPLSGIIFSRKMLEGTELGVEQKQLLHTSAQCQRQL 943

Query: 640  NKXXXXXXXXXXXDGYLDLEMVEFTLNEVVVASISQVMLKSNGKGIRIVNDMAEEIISEI 461
            NK           DGYLDLEMVEFTL++V+VASISQVM+KSNGKGIR+VN+ AEEI++E 
Sbjct: 944  NKILDDSDLDSIIDGYLDLEMVEFTLHDVLVASISQVMMKSNGKGIRVVNETAEEIMNET 1003

Query: 460  LYGDSLRLQQVLADFLLVSINYMSNGGQLGIAASLAKDRLGESVQLAHAEFRITHAGGGV 281
            LYGDS+RLQQVLADFL VS+++  NGGQL ++ SL KD+LG+SV LA  E RITHAGGG+
Sbjct: 1004 LYGDSIRLQQVLADFLSVSVSFTPNGGQLIVSTSLTKDQLGQSVHLARLELRITHAGGGI 1063

Query: 280  PEELLSQMFGSDGDTDEEGISLLISRKLVKLMNGDVQYLREAGKSTFIISVELAATNK 107
            PE LL QMFG+DGD  EEGISLLISRKLVKLMNGDVQYLREAGKSTFI++VELAA +K
Sbjct: 1064 PEALLDQMFGADGDATEEGISLLISRKLVKLMNGDVQYLREAGKSTFIVTVELAAAHK 1121


>ref|XP_007031301.1| Phytochrome A [Theobroma cacao] gi|508719906|gb|EOY11803.1|
            Phytochrome A [Theobroma cacao]
          Length = 1121

 Score = 1351 bits (3496), Expect = 0.0
 Identities = 666/839 (79%), Positives = 744/839 (88%), Gaps = 1/839 (0%)
 Frame = -3

Query: 2620 KNKVRMICDCNAKNVKVLQDEKLPLDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVV 2441
            KNKVRMI DC+AK+VKV QD+KLP DLTLCGSTLRAPHSCHLQYMENMNSIASLVMAV+V
Sbjct: 280  KNKVRMIVDCHAKHVKVFQDDKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVIV 339

Query: 2440 NXXXXXXXXXXXXXAQ-KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEFE 2264
            N              Q KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE E
Sbjct: 340  NDGDEEGDGPDSAQPQQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEIE 399

Query: 2263 LENQIIEKNMLRTQTLLCDMLMRDAPLGIVSQSPNIMDLVKCDGAALFYKNKIYRLGVTP 2084
            LENQIIEKN+LRTQTLLCDML+RDAP+GI+SQSPNIMDLVKCDGAAL YKNKI++LGVTP
Sbjct: 400  LENQIIEKNILRTQTLLCDMLLRDAPMGIISQSPNIMDLVKCDGAALLYKNKIWKLGVTP 459

Query: 2083 SDFHLHDVVSWLSEFHMDSTGLSTDSLYDAGYPGALALGSVVCGMAAVRINSKDMLFWFR 1904
            SDF LH++ SWLSE+HMDSTGLSTDSLYDAG+PGALALG VVCGMAAVRI  KDMLFWFR
Sbjct: 460  SDFQLHEIASWLSEYHMDSTGLSTDSLYDAGFPGALALGDVVCGMAAVRITLKDMLFWFR 519

Query: 1903 SHTAAEIRWGGAKHEPGEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLIL 1724
            SHTAAEIRWGGAKHEPGEKD+GRKMHPRSSFKAFL+VVKTRS+PWKDYEMDAIHSLQLIL
Sbjct: 520  SHTAAEIRWGGAKHEPGEKDNGRKMHPRSSFKAFLQVVKTRSMPWKDYEMDAIHSLQLIL 579

Query: 1723 RNAFKDADAIDLNTNAIHKQLNDLKIAGMQELKAVTGEMVRLIETATAPILAVDVDGLVN 1544
            RNAFKD +  D NT+AIH +L+DLKI GMQEL+AVT EMVRLIETAT PILAVDVDGLVN
Sbjct: 580  RNAFKDVETTDTNTSAIHSKLSDLKIEGMQELEAVTSEMVRLIETATVPILAVDVDGLVN 639

Query: 1543 GWNTKIAELTGLPINRALGRHLLTLVEDSSAGIVKKMLHLAIQGKEEQNIQFEIKTHGSR 1364
            GWN KIAELTGLP+++A+G+HLLTLVEDSS   VK+ML LA+QGKEE+NIQFEIKTHGSR
Sbjct: 640  GWNMKIAELTGLPVDKAIGKHLLTLVEDSSVETVKQMLVLALQGKEEKNIQFEIKTHGSR 699

Query: 1363 SDSGPISLLVNACASKDLQENVVGVCFVAQDITGQRNVMDKFTRIEGDYKAIVQNPNPLI 1184
             ++GPISL+VNACA++DL ENVVGVCFVAQDITGQ+ VMDKFTRIEGDYKAIVQNPNPLI
Sbjct: 700  IEAGPISLVVNACANRDLHENVVGVCFVAQDITGQKIVMDKFTRIEGDYKAIVQNPNPLI 759

Query: 1183 PPIFGADEFGWCSEWNAAMKKVSGWDREEVIDKMLLGEVFGINTAYCRLKNREAFVNLGI 1004
            PPIFG DEFGWCSEWN AM K++GW R+EV+DKMLLGEVFG + A CRLK++++FVNLG+
Sbjct: 760  PPIFGMDEFGWCSEWNPAMTKLTGWKRDEVVDKMLLGEVFGTHIACCRLKSQDSFVNLGV 819

Query: 1003 VLNNAMTGQESEKISFGFFARSGKYIECLLCVSKKLDGEGAVTGVFCFXXXXXXXXXXXL 824
            VLNNAMTG E EK+ FGFFARSGKY+ECLLCV+KKLD E AVTGVFCF           L
Sbjct: 820  VLNNAMTGHEPEKVPFGFFARSGKYVECLLCVNKKLDREDAVTGVFCFLQLASHELQQAL 879

Query: 823  HVQRLSEQTALKRLKVLSYIRRQIKNPLSGIIFSRKMMEGTDLGEEQKQLLHTSAQCQRQ 644
            HVQRLSEQTA+KRLK L+Y++RQI+NPLSGIIFSRKMMEGT+LG EQK+LL TS  CQRQ
Sbjct: 880  HVQRLSEQTAMKRLKALAYLKRQIRNPLSGIIFSRKMMEGTELGPEQKRLLQTSTLCQRQ 939

Query: 643  INKXXXXXXXXXXXDGYLDLEMVEFTLNEVVVASISQVMLKSNGKGIRIVNDMAEEIISE 464
            ++K           DGYLDLEM++FTL+EV+VASISQVM+KSNGKGIRIVND  EE+++E
Sbjct: 940  LSKILDDSDLDSIIDGYLDLEMIDFTLHEVLVASISQVMMKSNGKGIRIVNDTEEEVMTE 999

Query: 463  ILYGDSLRLQQVLADFLLVSINYMSNGGQLGIAASLAKDRLGESVQLAHAEFRITHAGGG 284
             LYGDS+RLQQVLADFLL+S+N+  NGGQL + ASL KD+LG+SV LAH E RITHAGGG
Sbjct: 1000 TLYGDSVRLQQVLADFLLISVNFTPNGGQLVVVASLTKDQLGQSVHLAHLELRITHAGGG 1059

Query: 283  VPEELLSQMFGSDGDTDEEGISLLISRKLVKLMNGDVQYLREAGKSTFIISVELAATNK 107
            VPE LLSQMFGSDGD  EEGISLLISRKLVKLMNGD+QYLREAG+STFI++VELAA N+
Sbjct: 1060 VPEALLSQMFGSDGDASEEGISLLISRKLVKLMNGDIQYLREAGRSTFIVTVELAAANR 1118


>ref|XP_006423945.1| hypothetical protein CICLE_v10027712mg [Citrus clementina]
            gi|568853345|ref|XP_006480323.1| PREDICTED: phytochrome
            A-like [Citrus sinensis] gi|557525879|gb|ESR37185.1|
            hypothetical protein CICLE_v10027712mg [Citrus
            clementina]
          Length = 1117

 Score = 1340 bits (3468), Expect = 0.0
 Identities = 668/837 (79%), Positives = 738/837 (88%)
 Frame = -3

Query: 2620 KNKVRMICDCNAKNVKVLQDEKLPLDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVV 2441
            KNKVRMI DC A++VKVLQDEKLP DLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVV
Sbjct: 284  KNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVV 343

Query: 2440 NXXXXXXXXXXXXXAQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEFEL 2261
            N              QKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE EL
Sbjct: 344  NDEEEEGDNTLP---QKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELEL 400

Query: 2260 ENQIIEKNMLRTQTLLCDMLMRDAPLGIVSQSPNIMDLVKCDGAALFYKNKIYRLGVTPS 2081
            E QI+EKN+LRTQTLLCDMLMRDAPLGIV+QSPNIMDLVKCDGAAL YKNKI+RLGVTP+
Sbjct: 401  EYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPN 460

Query: 2080 DFHLHDVVSWLSEFHMDSTGLSTDSLYDAGYPGALALGSVVCGMAAVRINSKDMLFWFRS 1901
            DF LHD+VSWLSE+HMDSTGLS DSLYDAGYPGALALG VVCGMAAVRI+ KDM+FWFRS
Sbjct: 461  DFQLHDIVSWLSEYHMDSTGLSADSLYDAGYPGALALGDVVCGMAAVRISPKDMIFWFRS 520

Query: 1900 HTAAEIRWGGAKHEPGEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILR 1721
             TA+E+RWGGAKHEP EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILR
Sbjct: 521  QTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILR 580

Query: 1720 NAFKDADAIDLNTNAIHKQLNDLKIAGMQELKAVTGEMVRLIETATAPILAVDVDGLVNG 1541
            NAFKD   +DL+T +IH +L DLKI GM+EL+AVT EMVRLIETAT PILAVDVDGLVNG
Sbjct: 581  NAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNG 640

Query: 1540 WNTKIAELTGLPINRALGRHLLTLVEDSSAGIVKKMLHLAIQGKEEQNIQFEIKTHGSRS 1361
            WNTKIAELTGL +++A+G+H LTLVEDSS   VK+ML+LA+QG+EEQNIQFEIKTHGS+ 
Sbjct: 641  WNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKI 700

Query: 1360 DSGPISLLVNACASKDLQENVVGVCFVAQDITGQRNVMDKFTRIEGDYKAIVQNPNPLIP 1181
            +  PI+L+VNACAS+DL +NVVGVCFVAQDIT Q+ VMDKFTRIEGDYKAIVQNPNPLIP
Sbjct: 701  NDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIP 760

Query: 1180 PIFGADEFGWCSEWNAAMKKVSGWDREEVIDKMLLGEVFGINTAYCRLKNREAFVNLGIV 1001
            PIFG+DEFGWC EWN AM K++GW REEVIDK+LL EVFG N A CRLKN+EAFVNLGIV
Sbjct: 761  PIFGSDEFGWCCEWNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIV 820

Query: 1000 LNNAMTGQESEKISFGFFARSGKYIECLLCVSKKLDGEGAVTGVFCFXXXXXXXXXXXLH 821
            LN AM+GQ+ EK+ FGFFAR+GKY ECLLCV+KKLD EGAVTGVFCF           LH
Sbjct: 821  LNKAMSGQDPEKVPFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALH 880

Query: 820  VQRLSEQTALKRLKVLSYIRRQIKNPLSGIIFSRKMMEGTDLGEEQKQLLHTSAQCQRQI 641
            VQRLSEQTALKRLK L+Y +RQI+NPLSGIIFSRKMMEGT+LG EQK+LLHTSAQCQRQ+
Sbjct: 881  VQRLSEQTALKRLKALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQL 940

Query: 640  NKXXXXXXXXXXXDGYLDLEMVEFTLNEVVVASISQVMLKSNGKGIRIVNDMAEEIISEI 461
            +K           DGYLDLEMVEFTLNEV+VASISQVM+KSN KGIRIVN+ AE+I+SE 
Sbjct: 941  HKILDDSDLDSIIDGYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSET 1000

Query: 460  LYGDSLRLQQVLADFLLVSINYMSNGGQLGIAASLAKDRLGESVQLAHAEFRITHAGGGV 281
            LYGDS+RLQQVLADFL +SIN++ NGGQL +++SL KD+LG SV LA+ E RITHAGGG+
Sbjct: 1001 LYGDSIRLQQVLADFLSISINFVPNGGQLMVSSSLTKDQLGRSVHLAYLELRITHAGGGI 1060

Query: 280  PEELLSQMFGSDGDTDEEGISLLISRKLVKLMNGDVQYLREAGKSTFIISVELAATN 110
            PE LL QMFGS+GDT EEGISLLISRKLVKLMNGDVQYLREAGKSTFI+SVELAA +
Sbjct: 1061 PEPLLDQMFGSEGDTSEEGISLLISRKLVKLMNGDVQYLREAGKSTFIVSVELAAAH 1117


>ref|XP_008246343.1| PREDICTED: phytochrome A [Prunus mume]
          Length = 1124

 Score = 1338 bits (3463), Expect = 0.0
 Identities = 668/839 (79%), Positives = 740/839 (88%)
 Frame = -3

Query: 2620 KNKVRMICDCNAKNVKVLQDEKLPLDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVV 2441
            KNKVRMI DC AK VKVLQDEKLP DLTLCGSTLRAPHSCHLQYM+NM+SIASLVMAVVV
Sbjct: 284  KNKVRMIVDCCAKQVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMKNMDSIASLVMAVVV 343

Query: 2440 NXXXXXXXXXXXXXAQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEFEL 2261
            N              QKRKRLWGLVVCHNT+PRFVPFPLRYACEFLAQVFAIHVNKE EL
Sbjct: 344  NEGDDEVASPDSVQPQKRKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEIEL 403

Query: 2260 ENQIIEKNMLRTQTLLCDMLMRDAPLGIVSQSPNIMDLVKCDGAALFYKNKIYRLGVTPS 2081
            E+Q++EKN+LRTQTLLCDML+RDAPLGIVSQSPNIMDLVKCDGAAL YK+KI+RLG+TPS
Sbjct: 404  EDQMVEKNILRTQTLLCDMLLRDAPLGIVSQSPNIMDLVKCDGAALLYKSKIWRLGITPS 463

Query: 2080 DFHLHDVVSWLSEFHMDSTGLSTDSLYDAGYPGALALGSVVCGMAAVRINSKDMLFWFRS 1901
            DF LHD+ SWL+E+HMDSTGLSTDSLYDAG+PGALALG VVCGMAAVRI SKDMLFWFRS
Sbjct: 464  DFQLHDIASWLAEYHMDSTGLSTDSLYDAGFPGALALGDVVCGMAAVRITSKDMLFWFRS 523

Query: 1900 HTAAEIRWGGAKHEPGEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILR 1721
            HTAAEIRWGGAKHE GEKDDG +MHPRSSFKAFLEVVK+RSLPWKD+EMDAIHSLQLILR
Sbjct: 524  HTAAEIRWGGAKHESGEKDDGWRMHPRSSFKAFLEVVKSRSLPWKDFEMDAIHSLQLILR 583

Query: 1720 NAFKDADAIDLNTNAIHKQLNDLKIAGMQELKAVTGEMVRLIETATAPILAVDVDGLVNG 1541
            NAFKD + + +N NAIH +L+DLKI GMQEL+AVT EMVRLIETAT PILAVDVDGLVNG
Sbjct: 584  NAFKDVETVGVNPNAIHVKLSDLKIEGMQELEAVTSEMVRLIETATVPILAVDVDGLVNG 643

Query: 1540 WNTKIAELTGLPINRALGRHLLTLVEDSSAGIVKKMLHLAIQGKEEQNIQFEIKTHGSRS 1361
            WNTKI+ELTGLP++ A+G+HLL+LVEDSS  +VK+ML LA+ GKEEQNIQFEIKTHGSRS
Sbjct: 644  WNTKISELTGLPVDEAIGKHLLSLVEDSSTKMVKRMLDLALHGKEEQNIQFEIKTHGSRS 703

Query: 1360 DSGPISLLVNACASKDLQENVVGVCFVAQDITGQRNVMDKFTRIEGDYKAIVQNPNPLIP 1181
            D GPISL+VNACAS+D++ENVVGVCFVAQDITGQ+ VMDKFTRIEGDYKAIVQNPNPLIP
Sbjct: 704  DLGPISLVVNACASRDIRENVVGVCFVAQDITGQKTVMDKFTRIEGDYKAIVQNPNPLIP 763

Query: 1180 PIFGADEFGWCSEWNAAMKKVSGWDREEVIDKMLLGEVFGINTAYCRLKNREAFVNLGIV 1001
            PIFG DEFGWCSEWN AM K++GW REEVIDKMLLGEVFGIN A C LK++EAFVNLGIV
Sbjct: 764  PIFGTDEFGWCSEWNPAMTKLTGWKREEVIDKMLLGEVFGINMACCPLKSQEAFVNLGIV 823

Query: 1000 LNNAMTGQESEKISFGFFARSGKYIECLLCVSKKLDGEGAVTGVFCFXXXXXXXXXXXLH 821
            LN+AMTGQ SEK+ FGF ARSGK+IECLLCVSKKLDGEG+VTGVFCF           LH
Sbjct: 824  LNHAMTGQVSEKVPFGFSARSGKHIECLLCVSKKLDGEGSVTGVFCFLQLASPELQQALH 883

Query: 820  VQRLSEQTALKRLKVLSYIRRQIKNPLSGIIFSRKMMEGTDLGEEQKQLLHTSAQCQRQI 641
            VQRLSEQTA+KR K LSYI+RQI+NPL+GI+FSRKMMEGT+LG EQKQLLHTSAQCQ Q+
Sbjct: 884  VQRLSEQTAVKRSKELSYIKRQIRNPLAGIMFSRKMMEGTELGTEQKQLLHTSAQCQHQL 943

Query: 640  NKXXXXXXXXXXXDGYLDLEMVEFTLNEVVVASISQVMLKSNGKGIRIVNDMAEEIISEI 461
            NK           DGYLDLEMVEFTL+EV++AS+SQVM KSN K IRIV+D AEEI++E 
Sbjct: 944  NKILDDSDLDTIIDGYLDLEMVEFTLHEVLLASVSQVMSKSNAKSIRIVHDAAEEIMNET 1003

Query: 460  LYGDSLRLQQVLADFLLVSINYMSNGGQLGIAASLAKDRLGESVQLAHAEFRITHAGGGV 281
            LYGDSLRLQQVLADFL VSIN+M  GGQL IAA+L KD+LG+SV L H E RITHAGGG+
Sbjct: 1004 LYGDSLRLQQVLADFLAVSINFMPTGGQLTIAANLTKDQLGQSVHLVHLELRITHAGGGI 1063

Query: 280  PEELLSQMFGSDGDTDEEGISLLISRKLVKLMNGDVQYLREAGKSTFIISVELAATNKL 104
            PE LL+QMFG+D    EEGI LL+S +LVKLMNGDV+YLREAGK+TFIISVELAA +KL
Sbjct: 1064 PEGLLNQMFGNDIAISEEGIGLLVSSRLVKLMNGDVRYLREAGKATFIISVELAAAHKL 1122


>ref|XP_009622127.1| PREDICTED: phytochrome A1 [Nicotiana tomentosiformis]
            gi|697136117|ref|XP_009622128.1| PREDICTED: phytochrome
            A1 [Nicotiana tomentosiformis]
            gi|697136119|ref|XP_009622129.1| PREDICTED: phytochrome
            A1 [Nicotiana tomentosiformis]
          Length = 1123

 Score = 1337 bits (3461), Expect = 0.0
 Identities = 658/838 (78%), Positives = 736/838 (87%)
 Frame = -3

Query: 2620 KNKVRMICDCNAKNVKVLQDEKLPLDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVV 2441
            KNKVRMICDC AK+VKV+QDEKLP DLTLCGSTLRAPH CHLQYMENM+SIASLVMAVVV
Sbjct: 284  KNKVRMICDCRAKHVKVVQDEKLPYDLTLCGSTLRAPHYCHLQYMENMSSIASLVMAVVV 343

Query: 2440 NXXXXXXXXXXXXXAQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEFEL 2261
            N             +QKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE EL
Sbjct: 344  NDGDEEGESSDSTQSQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELEL 403

Query: 2260 ENQIIEKNMLRTQTLLCDMLMRDAPLGIVSQSPNIMDLVKCDGAALFYKNKIYRLGVTPS 2081
            E+QI+EKN+LRTQTLLCDMLMRDAPLGIVSQSPNIMDLVKCD AAL YKNKI+RLG+TPS
Sbjct: 404  ESQILEKNILRTQTLLCDMLMRDAPLGIVSQSPNIMDLVKCDAAALLYKNKIHRLGMTPS 463

Query: 2080 DFHLHDVVSWLSEFHMDSTGLSTDSLYDAGYPGALALGSVVCGMAAVRINSKDMLFWFRS 1901
            DF LHD+VSWLSE+H DSTGLSTDS+YDAG+PGALALG  VCGMAAVRI+ KD LFWFRS
Sbjct: 464  DFQLHDIVSWLSEYHTDSTGLSTDSMYDAGFPGALALGDAVCGMAAVRISDKDWLFWFRS 523

Query: 1900 HTAAEIRWGGAKHEPGEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILR 1721
            HTAAE+RWGGAKHEPGEKDDGRKMHPRSSFKAFLEVVKTRS+PWKDYEMDAIHSLQLILR
Sbjct: 524  HTAAEVRWGGAKHEPGEKDDGRKMHPRSSFKAFLEVVKTRSIPWKDYEMDAIHSLQLILR 583

Query: 1720 NAFKDADAIDLNTNAIHKQLNDLKIAGMQELKAVTGEMVRLIETATAPILAVDVDGLVNG 1541
            NA KDADA+D NTN IH +LNDLKI G+QEL+AVT EMVRLIETA+ PI AVDVDG +NG
Sbjct: 584  NASKDADAMDSNTNTIHTKLNDLKIDGLQELEAVTAEMVRLIETASVPIFAVDVDGQLNG 643

Query: 1540 WNTKIAELTGLPINRALGRHLLTLVEDSSAGIVKKMLHLAIQGKEEQNIQFEIKTHGSRS 1361
            WNTKIAELTGLP++ A+G HLLTLVEDSS   V KML LA+QGKEE+N++FEIKTHG   
Sbjct: 644  WNTKIAELTGLPVDEAIGNHLLTLVEDSSVDTVSKMLELALQGKEERNVEFEIKTHGLSG 703

Query: 1360 DSGPISLLVNACASKDLQENVVGVCFVAQDITGQRNVMDKFTRIEGDYKAIVQNPNPLIP 1181
            DS PISL+VNACAS+D+ ++VVGVCF+AQDITGQ+N+MDKFTRIEGDY+AI+QNP+PLIP
Sbjct: 704  DSSPISLIVNACASRDVGDSVVGVCFIAQDITGQKNIMDKFTRIEGDYRAIIQNPHPLIP 763

Query: 1180 PIFGADEFGWCSEWNAAMKKVSGWDREEVIDKMLLGEVFGINTAYCRLKNREAFVNLGIV 1001
            PIFG D+FGWCSEWN+AM K++GW R++VIDKMLLGEVFG   A CR KN+EAFVN G+V
Sbjct: 764  PIFGTDQFGWCSEWNSAMTKLTGWRRDDVIDKMLLGEVFGTQGACCRFKNQEAFVNFGVV 823

Query: 1000 LNNAMTGQESEKISFGFFARSGKYIECLLCVSKKLDGEGAVTGVFCFXXXXXXXXXXXLH 821
            LNNAMTGQE EKISFGFFAR+GKY+ECLLCVSKKLD EGAVTG+FCF           LH
Sbjct: 824  LNNAMTGQECEKISFGFFARNGKYVECLLCVSKKLDREGAVTGLFCFLQLASHELQQALH 883

Query: 820  VQRLSEQTALKRLKVLSYIRRQIKNPLSGIIFSRKMMEGTDLGEEQKQLLHTSAQCQRQI 641
            VQRLSEQTALKRLKVL+YIRRQI+NPLSGIIFSRKM+EGT+LGEEQK +LHTS+QCQRQ+
Sbjct: 884  VQRLSEQTALKRLKVLAYIRRQIRNPLSGIIFSRKMLEGTNLGEEQKNILHTSSQCQRQL 943

Query: 640  NKXXXXXXXXXXXDGYLDLEMVEFTLNEVVVASISQVMLKSNGKGIRIVNDMAEEIISEI 461
            NK           DGYLDLEM+EF L+EV+VASISQ+M+KSNGK I IVNDM E++++E 
Sbjct: 944  NKILDDTDLDSIIDGYLDLEMLEFKLHEVLVASISQIMMKSNGKNIMIVNDMVEDLLNET 1003

Query: 460  LYGDSLRLQQVLADFLLVSINYMSNGGQLGIAASLAKDRLGESVQLAHAEFRITHAGGGV 281
            LYGDS RLQQVLA+FLLVS+N   +GGQL I+  L KDR+GESVQLA  EFRI+H GGGV
Sbjct: 1004 LYGDSPRLQQVLANFLLVSVNSTPSGGQLSISGRLTKDRIGESVQLALLEFRISHTGGGV 1063

Query: 280  PEELLSQMFGSDGDTDEEGISLLISRKLVKLMNGDVQYLREAGKSTFIISVELAATNK 107
            PEELLSQMFG++ +  EEGISLLISRKLVKLMNG+VQYLREAG+STFIISVELA   K
Sbjct: 1064 PEELLSQMFGTEAEASEEGISLLISRKLVKLMNGEVQYLREAGRSTFIISVELAVATK 1121


>gb|KDO56362.1| hypothetical protein CISIN_1g001235mg [Citrus sinensis]
          Length = 1117

 Score = 1337 bits (3460), Expect = 0.0
 Identities = 667/837 (79%), Positives = 738/837 (88%)
 Frame = -3

Query: 2620 KNKVRMICDCNAKNVKVLQDEKLPLDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVV 2441
            KNKVRMI DC A++VKVLQDEKLP DLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVV
Sbjct: 284  KNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVV 343

Query: 2440 NXXXXXXXXXXXXXAQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEFEL 2261
            N              QKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE EL
Sbjct: 344  NDEEEEGDNTLP---QKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELEL 400

Query: 2260 ENQIIEKNMLRTQTLLCDMLMRDAPLGIVSQSPNIMDLVKCDGAALFYKNKIYRLGVTPS 2081
            E QI+EKN+LRTQTLLCDMLMRDAPLGIV+QSPNIMDLVKCDGAAL YKNKI+RLGVTP+
Sbjct: 401  EYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPN 460

Query: 2080 DFHLHDVVSWLSEFHMDSTGLSTDSLYDAGYPGALALGSVVCGMAAVRINSKDMLFWFRS 1901
            DF LHD+VSWLSE+HMDSTGLS DSLYDAGY GALALG VVCGMAAVRI+ KDM+FWFRS
Sbjct: 461  DFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRS 520

Query: 1900 HTAAEIRWGGAKHEPGEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILR 1721
             TA+E+RWGGAKHEP EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILR
Sbjct: 521  QTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILR 580

Query: 1720 NAFKDADAIDLNTNAIHKQLNDLKIAGMQELKAVTGEMVRLIETATAPILAVDVDGLVNG 1541
            NAFKD   +DL+T +IH +L DLKI GM+EL+AVT EMVRLIETAT PILAVDVDGLVNG
Sbjct: 581  NAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNG 640

Query: 1540 WNTKIAELTGLPINRALGRHLLTLVEDSSAGIVKKMLHLAIQGKEEQNIQFEIKTHGSRS 1361
            WNTKIAELTGL +++A+G+H LTLVEDSS   VK+ML+LA+QG+EEQNIQFEIKTHGS+ 
Sbjct: 641  WNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKI 700

Query: 1360 DSGPISLLVNACASKDLQENVVGVCFVAQDITGQRNVMDKFTRIEGDYKAIVQNPNPLIP 1181
            +  PI+L+VNACAS+DL +NVVGVCFVAQDIT Q+ VMDKFTRIEGDYKAIVQNPNPLIP
Sbjct: 701  NDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIP 760

Query: 1180 PIFGADEFGWCSEWNAAMKKVSGWDREEVIDKMLLGEVFGINTAYCRLKNREAFVNLGIV 1001
            PIFG+DEFGWC EWN AM K++GW REEVIDK+LL EVFG N A CRLKN+EAFVNLGIV
Sbjct: 761  PIFGSDEFGWCCEWNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIV 820

Query: 1000 LNNAMTGQESEKISFGFFARSGKYIECLLCVSKKLDGEGAVTGVFCFXXXXXXXXXXXLH 821
            LN AM+GQ+ EK+ FGFFAR+GKY ECLLCV+KKLD EGAVTGVFCF           LH
Sbjct: 821  LNKAMSGQDPEKVPFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALH 880

Query: 820  VQRLSEQTALKRLKVLSYIRRQIKNPLSGIIFSRKMMEGTDLGEEQKQLLHTSAQCQRQI 641
            VQRLSEQTALKRLK L+Y +RQI+NPLSGIIFSRKMMEGT+LG EQK+LLHTSAQCQRQ+
Sbjct: 881  VQRLSEQTALKRLKALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQL 940

Query: 640  NKXXXXXXXXXXXDGYLDLEMVEFTLNEVVVASISQVMLKSNGKGIRIVNDMAEEIISEI 461
            +K           DGYLDLEMVEFTLNEV+VASISQVM+KSN KGIRIVN+ AE+I+SE 
Sbjct: 941  HKILDDSDLDSIIDGYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSET 1000

Query: 460  LYGDSLRLQQVLADFLLVSINYMSNGGQLGIAASLAKDRLGESVQLAHAEFRITHAGGGV 281
            LYGDS+RLQQVLADFL +SIN++ NGGQL +++SL KD+LG+SV LA+ E RITHAGGG+
Sbjct: 1001 LYGDSIRLQQVLADFLSISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLELRITHAGGGI 1060

Query: 280  PEELLSQMFGSDGDTDEEGISLLISRKLVKLMNGDVQYLREAGKSTFIISVELAATN 110
            PE LL QMFGS+GDT EEGISLLISRKLVKLMNGDVQYLREAGKSTFI+SVELAA +
Sbjct: 1061 PEPLLDQMFGSEGDTSEEGISLLISRKLVKLMNGDVQYLREAGKSTFIVSVELAAAH 1117


>ref|XP_006339917.1| PREDICTED: type A phytochrome [Solanum tuberosum]
          Length = 1123

 Score = 1334 bits (3452), Expect = 0.0
 Identities = 653/838 (77%), Positives = 734/838 (87%)
 Frame = -3

Query: 2620 KNKVRMICDCNAKNVKVLQDEKLPLDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVV 2441
            KNKVRMICDC AK+VKV+QDEKLP DLTLCGSTLRAPH CHLQYMENMNSIASLVMAVVV
Sbjct: 284  KNKVRMICDCRAKHVKVVQDEKLPFDLTLCGSTLRAPHYCHLQYMENMNSIASLVMAVVV 343

Query: 2440 NXXXXXXXXXXXXXAQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEFEL 2261
            N             +QKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE EL
Sbjct: 344  NDGDEEGESSDSSQSQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELEL 403

Query: 2260 ENQIIEKNMLRTQTLLCDMLMRDAPLGIVSQSPNIMDLVKCDGAALFYKNKIYRLGVTPS 2081
            ENQ +EKN+LRTQTLLCDMLMRDAPLGIVSQSPNIMDL+KCDGAAL YKNKI+RLG+ PS
Sbjct: 404  ENQFLEKNILRTQTLLCDMLMRDAPLGIVSQSPNIMDLIKCDGAALLYKNKIHRLGMNPS 463

Query: 2080 DFHLHDVVSWLSEFHMDSTGLSTDSLYDAGYPGALALGSVVCGMAAVRINSKDMLFWFRS 1901
            DF LHD+VSWL E+H DSTGLSTDSLYDAG+PGALALG  VCGMAAVRI+ KD LFW+RS
Sbjct: 464  DFQLHDIVSWLCEYHTDSTGLSTDSLYDAGFPGALALGDAVCGMAAVRISDKDWLFWYRS 523

Query: 1900 HTAAEIRWGGAKHEPGEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILR 1721
            HTAAE+RWGGAKHEPGEKDDGRKMHPRSSFKAFLEVVKTRS+PWKDYEMDAIHSLQLILR
Sbjct: 524  HTAAEVRWGGAKHEPGEKDDGRKMHPRSSFKAFLEVVKTRSIPWKDYEMDAIHSLQLILR 583

Query: 1720 NAFKDADAIDLNTNAIHKQLNDLKIAGMQELKAVTGEMVRLIETATAPILAVDVDGLVNG 1541
            NAFKDADA++ NT +IH +LNDLKI GMQEL+AVT EMVRLIETA+ PI AVDVDG VNG
Sbjct: 584  NAFKDADAVNSNTISIHTKLNDLKIDGMQELEAVTAEMVRLIETASVPIFAVDVDGQVNG 643

Query: 1540 WNTKIAELTGLPINRALGRHLLTLVEDSSAGIVKKMLHLAIQGKEEQNIQFEIKTHGSRS 1361
            WNTK+AELTGLP++ A+G+HLLTLVEDSS   V KML LA+QGKEE+N++FEIKTHG   
Sbjct: 644  WNTKVAELTGLPVDEAIGKHLLTLVEDSSVDTVNKMLELALQGKEERNVEFEIKTHGPSR 703

Query: 1360 DSGPISLLVNACASKDLQENVVGVCFVAQDITGQRNVMDKFTRIEGDYKAIVQNPNPLIP 1181
            DS PISL+VNACASKD++++VVGVCF+AQDITGQ+++MDKFTRIEGDY+AI+QNP+PLIP
Sbjct: 704  DSSPISLIVNACASKDVRDSVVGVCFIAQDITGQKSIMDKFTRIEGDYRAIIQNPHPLIP 763

Query: 1180 PIFGADEFGWCSEWNAAMKKVSGWDREEVIDKMLLGEVFGINTAYCRLKNREAFVNLGIV 1001
            PIFG D+FGWCSEWN+AM K++GW R++V+DKMLLGEVFG   A CRLKN+EAFVN G++
Sbjct: 764  PIFGTDQFGWCSEWNSAMTKLTGWRRDDVMDKMLLGEVFGTQAACCRLKNQEAFVNFGVI 823

Query: 1000 LNNAMTGQESEKISFGFFARSGKYIECLLCVSKKLDGEGAVTGVFCFXXXXXXXXXXXLH 821
            LNNA+TGQESEKI FGFFAR GKY+ECLLCVSK+LD EGAVTG+FCF           LH
Sbjct: 824  LNNAITGQESEKIPFGFFARYGKYVECLLCVSKRLDKEGAVTGLFCFLQLASHELQQALH 883

Query: 820  VQRLSEQTALKRLKVLSYIRRQIKNPLSGIIFSRKMMEGTDLGEEQKQLLHTSAQCQRQI 641
            VQRLSEQTALKRLKVL+YIRRQI+NPLSGIIFSRKM+EGT LGEEQK +LHTSAQCQRQ+
Sbjct: 884  VQRLSEQTALKRLKVLAYIRRQIRNPLSGIIFSRKMLEGTSLGEEQKNILHTSAQCQRQL 943

Query: 640  NKXXXXXXXXXXXDGYLDLEMVEFTLNEVVVASISQVMLKSNGKGIRIVNDMAEEIISEI 461
            +K           +GYLDLEM+EF L+EV+VASISQVM+KSNGK I I NDM E++++E 
Sbjct: 944  DKILDDTDLDSIIEGYLDLEMLEFKLHEVLVASISQVMMKSNGKNIMISNDMVEDLLNET 1003

Query: 460  LYGDSLRLQQVLADFLLVSINYMSNGGQLGIAASLAKDRLGESVQLAHAEFRITHAGGGV 281
            LYGDS RLQQVLA+FLLVS+N   +GG+L I+  L KDR+GESVQLA  EFRI H GGGV
Sbjct: 1004 LYGDSPRLQQVLANFLLVSVNSTPSGGKLSISGKLTKDRIGESVQLALLEFRIRHTGGGV 1063

Query: 280  PEELLSQMFGSDGDTDEEGISLLISRKLVKLMNGDVQYLREAGKSTFIISVELAATNK 107
            PEELLSQMFGS+ D  EEGISLL+SRKLVKLMNG+VQYLREAG+STFIISVELA   K
Sbjct: 1064 PEELLSQMFGSEADASEEGISLLVSRKLVKLMNGEVQYLREAGRSTFIISVELAVATK 1121


>ref|XP_010094926.1| Phytochrome type A [Morus notabilis] gi|587868202|gb|EXB57569.1|
            Phytochrome type A [Morus notabilis]
          Length = 1130

 Score = 1330 bits (3443), Expect = 0.0
 Identities = 657/838 (78%), Positives = 727/838 (86%)
 Frame = -3

Query: 2620 KNKVRMICDCNAKNVKVLQDEKLPLDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVV 2441
            KNKVRMI DCNAK+VKV QDEKLP DLTLCGSTLRAPHSCHLQYM+NMNSIASLVMAVVV
Sbjct: 284  KNKVRMIVDCNAKHVKVFQDEKLPFDLTLCGSTLRAPHSCHLQYMDNMNSIASLVMAVVV 343

Query: 2440 NXXXXXXXXXXXXXAQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEFEL 2261
            N              QKRKRLWGLVVCHNT+PRFVPFPLRYACEFLAQVFAIHVNKE EL
Sbjct: 344  NEGDDDDDSPNSSQPQKRKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKELEL 403

Query: 2260 ENQIIEKNMLRTQTLLCDMLMRDAPLGIVSQSPNIMDLVKCDGAALFYKNKIYRLGVTPS 2081
            ENQI+EKN+LRTQTLLCDMLMRDAPLGIVSQSPNIMDLVKCDGAAL Y+NK++RLG+ PS
Sbjct: 404  ENQIVEKNILRTQTLLCDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYRNKVWRLGIAPS 463

Query: 2080 DFHLHDVVSWLSEFHMDSTGLSTDSLYDAGYPGALALGSVVCGMAAVRINSKDMLFWFRS 1901
            D  LHD+V WLSE HMDSTGLSTDSLYDAGYPGA AL  V+CGMAAVRI SKDM+FWFRS
Sbjct: 464  DSQLHDIVLWLSEHHMDSTGLSTDSLYDAGYPGAHALDDVICGMAAVRITSKDMIFWFRS 523

Query: 1900 HTAAEIRWGGAKHEPGEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILR 1721
            HTAAEI+WGGAKHEPGEKDDGRKMHPRSSFKAFLEVVKTRS PWKDYEMDAIHSLQLILR
Sbjct: 524  HTAAEIQWGGAKHEPGEKDDGRKMHPRSSFKAFLEVVKTRSFPWKDYEMDAIHSLQLILR 583

Query: 1720 NAFKDADAIDLNTNAIHKQLNDLKIAGMQELKAVTGEMVRLIETATAPILAVDVDGLVNG 1541
            NAFKD +A+D NT  I+ +L DLK  GMQEL+AVT EMVRLIETAT PILAVD+DG+VNG
Sbjct: 584  NAFKDTEALDSNTMTINTRLTDLKFEGMQELEAVTSEMVRLIETATVPILAVDIDGVVNG 643

Query: 1540 WNTKIAELTGLPINRALGRHLLTLVEDSSAGIVKKMLHLAIQGKEEQNIQFEIKTHGSRS 1361
            WNTKI++LTGLP+ +A+G HLLTLVEDSS  +V+ ML LA+QGKEE+NIQFEIKTHGSRS
Sbjct: 644  WNTKISDLTGLPVEQAIGAHLLTLVEDSSTEVVRVMLELALQGKEERNIQFEIKTHGSRS 703

Query: 1360 DSGPISLLVNACASKDLQENVVGVCFVAQDITGQRNVMDKFTRIEGDYKAIVQNPNPLIP 1181
            DSGPISL+VNACAS+DL  NVVGVCFVAQD+T Q+ +MDKFTRIEGDYKAIVQN NPLIP
Sbjct: 704  DSGPISLVVNACASRDLNGNVVGVCFVAQDLTAQKTMMDKFTRIEGDYKAIVQNRNPLIP 763

Query: 1180 PIFGADEFGWCSEWNAAMKKVSGWDREEVIDKMLLGEVFGINTAYCRLKNREAFVNLGIV 1001
            PIFGADEFGWCSEWN AM K++GW REEVIDKMLLGEVFG++   CRLKN+EAFVNLG+V
Sbjct: 764  PIFGADEFGWCSEWNPAMTKITGWKREEVIDKMLLGEVFGVSMTCCRLKNQEAFVNLGVV 823

Query: 1000 LNNAMTGQESEKISFGFFARSGKYIECLLCVSKKLDGEGAVTGVFCFXXXXXXXXXXXLH 821
            LNNAMTGQESEK+ FGFFAR+GKYIECLLCVSKKLD +GAVTGVFCF           LH
Sbjct: 824  LNNAMTGQESEKVPFGFFARNGKYIECLLCVSKKLDRDGAVTGVFCFLQLASLELQQALH 883

Query: 820  VQRLSEQTALKRLKVLSYIRRQIKNPLSGIIFSRKMMEGTDLGEEQKQLLHTSAQCQRQI 641
            VQRL EQ A KRLK L+YI+RQI+NPLSGIIFSRKMMEGT+LG EQKQLLHTSAQCQRQ+
Sbjct: 884  VQRLMEQIATKRLKALAYIKRQIRNPLSGIIFSRKMMEGTELGLEQKQLLHTSAQCQRQL 943

Query: 640  NKXXXXXXXXXXXDGYLDLEMVEFTLNEVVVASISQVMLKSNGKGIRIVNDMAEEIISEI 461
            +K           +GY DLEMVEFTL+E++VA+ SQVM+K   KGIR+V D +EE  ++ 
Sbjct: 944  SKILDDSDLDNIIEGYSDLEMVEFTLHEILVAATSQVMMKIKAKGIRLVEDASEETTNDT 1003

Query: 460  LYGDSLRLQQVLADFLLVSINYMSNGGQLGIAASLAKDRLGESVQLAHAEFRITHAGGGV 281
            LYGDSLRLQQVLADFLL+S+N+  NGGQ+ IAA+L KD LGESV L   E R+TH G G+
Sbjct: 1004 LYGDSLRLQQVLADFLLISVNFTPNGGQIVIAANLTKDHLGESVHLVRLELRLTHTGSGI 1063

Query: 280  PEELLSQMFGSDGDTDEEGISLLISRKLVKLMNGDVQYLREAGKSTFIISVELAATNK 107
            PE LL+QMFG+DGD  EEGISLLISRKLVKLMNGDVQYL+EAGKSTFIISVELAA +K
Sbjct: 1064 PESLLNQMFGTDGDVSEEGISLLISRKLVKLMNGDVQYLKEAGKSTFIISVELAAAHK 1121


>ref|NP_001234490.1| Phytochrome A [Solanum lycopersicum] gi|937834149|ref|NP_001303237.1|
            Phytochrome A [Solanum lycopersicum]
            gi|723736002|ref|XP_010327392.1| PREDICTED: alternative
            transcript type 3 isoform X1 [Solanum lycopersicum]
            gi|3492795|emb|CAA05086.1| phyA [Solanum lycopersicum]
            gi|3492797|emb|CAA05087.1| phyA [Solanum lycopersicum]
            gi|3492799|emb|CAA05088.1| phyA [Solanum lycopersicum]
            gi|3492801|emb|CAA05089.1| phyA [Solanum lycopersicum]
          Length = 1123

 Score = 1330 bits (3442), Expect = 0.0
 Identities = 658/838 (78%), Positives = 733/838 (87%), Gaps = 1/838 (0%)
 Frame = -3

Query: 2620 KNKVRMICDCNAKNVKVLQDEKLPLDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVV 2441
            KNKVRMICDC AK+VKV+QDEKLP DLTLCGSTLRAPH CHLQYMENMNSIASLVMAVVV
Sbjct: 284  KNKVRMICDCRAKHVKVVQDEKLPFDLTLCGSTLRAPHYCHLQYMENMNSIASLVMAVVV 343

Query: 2440 NXXXXXXXXXXXXXAQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEFEL 2261
            N             +QKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE EL
Sbjct: 344  NDGDEEGESSDSSQSQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELEL 403

Query: 2260 ENQIIEKNMLRTQTLLCDMLMRDAPLGIVSQSPNIMDLVKCDGAALFYKNKIYRLGVTPS 2081
            ENQ +EKN+LRTQTLLCDMLMRDAPLGIVSQSPNIMDLVKCDGAAL YKNKI+RLG+ PS
Sbjct: 404  ENQFLEKNILRTQTLLCDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKNKIHRLGMNPS 463

Query: 2080 DFHLHDVVSWLSEFHMDSTGLSTDSLYDAGYPGALALGSVVCGMAAVRINSKDMLFWFRS 1901
            DF L D+VSWL E+H DSTGLSTDSLYDAG+PGALALG  VCGMAAVRI+ KD LFWFRS
Sbjct: 464  DFQLQDIVSWLCEYHTDSTGLSTDSLYDAGFPGALALGDAVCGMAAVRISDKDWLFWFRS 523

Query: 1900 HTAAEIRWGGAKHEPGEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILR 1721
            HTAAE+RWGGAKHEPGEKDDGRKMHPRSSFKAFLEVVKTRS+PWKDYEMDAIHSLQLILR
Sbjct: 524  HTAAEVRWGGAKHEPGEKDDGRKMHPRSSFKAFLEVVKTRSIPWKDYEMDAIHSLQLILR 583

Query: 1720 NAFKDADAIDLNTNAIHKQLNDLKIAGMQELKAVTGEMVRLIETATAPILAVDVDGLVNG 1541
            NAFKDA+ ++ NTN+I+K+LNDLKI GMQEL++VT EMVRLIETA  PILAVDVDG VNG
Sbjct: 584  NAFKDAEVVNSNTNSIYKKLNDLKIDGMQELESVTAEMVRLIETALVPILAVDVDGQVNG 643

Query: 1540 WNTKIAELTGLPINRALGRHLLTLVEDSSAGIVKKMLHLAIQGKEEQNIQFEIKTHGSRS 1361
            WNTKIAELTGLP++ A+G+HLLTLVEDSS   V KML LA+QGKEE+N++FEIKTHG   
Sbjct: 644  WNTKIAELTGLPVDEAIGKHLLTLVEDSSVDTVNKMLELALQGKEEKNVEFEIKTHGPSR 703

Query: 1360 DSGPISLLVNACASKDLQENVVGVCFVAQDITGQRNVMDKFTRIEGDYKAIVQNPNPLIP 1181
            DS PISL+VNACASKD+++NVVGVCF+A DITGQ+++MDKFTRIEGDY+AI+QNP+PLIP
Sbjct: 704  DSSPISLIVNACASKDVRDNVVGVCFMAHDITGQKSIMDKFTRIEGDYRAIIQNPHPLIP 763

Query: 1180 PIFGADEFGWCSEWNAAMKKVSGWDREEVIDKMLLGEVFGINTAYCRLKNREAFVNLGIV 1001
            PIFG D+FGWCSEWN AM K++GW R++V+DKMLLGEVFG   A CRLKN+EAFVN G+V
Sbjct: 764  PIFGTDQFGWCSEWNTAMTKLTGWRRDDVMDKMLLGEVFGTQAACCRLKNQEAFVNFGVV 823

Query: 1000 LNNAMTGQESEKISFGFFARSGKYIECLLCVSKKLDGEGAVTGVFCFXXXXXXXXXXXLH 821
            LNNA+TGQESEKI FGFFAR GKY+ECLLCVSK+LD EGAVTG+FCF           L+
Sbjct: 824  LNNAITGQESEKIPFGFFARYGKYVECLLCVSKRLDKEGAVTGLFCFLQLASHELQQALY 883

Query: 820  VQRLSEQTALKRLKVLSYIRRQIKNPLSGIIFSRKMMEGTDLGEEQKQLLHTSAQCQRQI 641
            VQRLSEQTALKRLKVL+YIRRQI+NPLSGIIFSRKM+EGT LGEEQK +LHTSAQCQRQ+
Sbjct: 884  VQRLSEQTALKRLKVLAYIRRQIRNPLSGIIFSRKMLEGTSLGEEQKNILHTSAQCQRQL 943

Query: 640  NKXXXXXXXXXXXDGYLDLEMVEFTLNEVVVASISQVMLKSNGKGIRIVNDMAEEIISEI 461
            NK           DGYLDLEM+EF L+EV+VASISQVM+KSNGK I I NDM E++++E 
Sbjct: 944  NKILDDTDLDSIIDGYLDLEMLEFKLHEVLVASISQVMMKSNGKNIMISNDMVEDLLNET 1003

Query: 460  LYGDSLRLQQVLADFLLVSINYMSNGGQLGIAASLAKDRLGESVQLAHAEFRITHAGGGV 281
            LYGDS RLQQVLA+FLLVS+N   +GGQL I+  L KDR+GESVQLA  EFRI H GGGV
Sbjct: 1004 LYGDSPRLQQVLANFLLVSVNATPSGGQLSISGRLTKDRIGESVQLALLEFRIRHTGGGV 1063

Query: 280  PEELLSQMFGSDGDTDEEGISLLISRKLVKLMNGDVQYLREAGKSTFIISVELA-ATN 110
            PEELL QMFGS+ D  EEGISLL+SRKLVKLMNG+VQYLREAG+STFIISVELA ATN
Sbjct: 1064 PEELLGQMFGSEADASEEGISLLVSRKLVKLMNGEVQYLREAGQSTFIISVELAVATN 1121


>ref|XP_009769439.1| PREDICTED: phytochrome A1 [Nicotiana sylvestris]
            gi|698551835|ref|XP_009769440.1| PREDICTED: phytochrome
            A1 [Nicotiana sylvestris]
          Length = 1124

 Score = 1330 bits (3441), Expect = 0.0
 Identities = 654/838 (78%), Positives = 735/838 (87%)
 Frame = -3

Query: 2620 KNKVRMICDCNAKNVKVLQDEKLPLDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVV 2441
            KNKVRMICDC AK+VKV+QDEKLP DLTLCGSTLRAPH CHLQYMENM+SIASLVMAVVV
Sbjct: 284  KNKVRMICDCRAKHVKVVQDEKLPFDLTLCGSTLRAPHYCHLQYMENMSSIASLVMAVVV 343

Query: 2440 NXXXXXXXXXXXXXAQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEFEL 2261
            N             +QKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE EL
Sbjct: 344  NDGDEEGESSDSTQSQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELEL 403

Query: 2260 ENQIIEKNMLRTQTLLCDMLMRDAPLGIVSQSPNIMDLVKCDGAALFYKNKIYRLGVTPS 2081
            E+QI+EKN+LRTQTLLCDMLMRDAPLGIVSQSPNIMDLVKCDGAAL YKNKI+RLG+TPS
Sbjct: 404  ESQILEKNILRTQTLLCDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKNKIHRLGMTPS 463

Query: 2080 DFHLHDVVSWLSEFHMDSTGLSTDSLYDAGYPGALALGSVVCGMAAVRINSKDMLFWFRS 1901
            DF LHD+VSWLSE+H DSTGLSTDSLYDAG+PGALALG VVCGMAAVRI+ K  LFW+RS
Sbjct: 464  DFQLHDIVSWLSEYHTDSTGLSTDSLYDAGFPGALALGDVVCGMAAVRISDKGWLFWYRS 523

Query: 1900 HTAAEIRWGGAKHEPGEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILR 1721
            HTAAE+RWGGAKHEPGEKDDGRKMHPRSSFKAFLEVVKTRS+PWKDYEMDAIHSLQLILR
Sbjct: 524  HTAAEVRWGGAKHEPGEKDDGRKMHPRSSFKAFLEVVKTRSVPWKDYEMDAIHSLQLILR 583

Query: 1720 NAFKDADAIDLNTNAIHKQLNDLKIAGMQELKAVTGEMVRLIETATAPILAVDVDGLVNG 1541
            NA KDADA+D NTN IH +LNDLKI G+QEL+AVT EMVRLIETA+ PI AVDVDG +NG
Sbjct: 584  NASKDADAMDSNTNIIHTKLNDLKIDGLQELEAVTAEMVRLIETASVPIFAVDVDGQLNG 643

Query: 1540 WNTKIAELTGLPINRALGRHLLTLVEDSSAGIVKKMLHLAIQGKEEQNIQFEIKTHGSRS 1361
            WNTKIAELTGLP++ A+G HLLTLVEDSS   V KML LA+QGKEE+N++FEIKTHG   
Sbjct: 644  WNTKIAELTGLPVDEAIGNHLLTLVEDSSVDTVSKMLELALQGKEERNVEFEIKTHGPSG 703

Query: 1360 DSGPISLLVNACASKDLQENVVGVCFVAQDITGQRNVMDKFTRIEGDYKAIVQNPNPLIP 1181
            DS PISL+VNACAS+D+ ++VVGVCF+AQDITGQ+N+MDKFTRIEGDY+AI+QNP+PLIP
Sbjct: 704  DSSPISLIVNACASRDVGDSVVGVCFIAQDITGQKNIMDKFTRIEGDYRAIIQNPHPLIP 763

Query: 1180 PIFGADEFGWCSEWNAAMKKVSGWDREEVIDKMLLGEVFGINTAYCRLKNREAFVNLGIV 1001
            PIFG D+FGWCSEWN+AM K++GW R++VIDKMLLGEVFG   A CRLKN+EAFVN G+V
Sbjct: 764  PIFGTDQFGWCSEWNSAMTKLTGWRRDDVIDKMLLGEVFGTQAACCRLKNQEAFVNFGVV 823

Query: 1000 LNNAMTGQESEKISFGFFARSGKYIECLLCVSKKLDGEGAVTGVFCFXXXXXXXXXXXLH 821
            LNNAMTGQE  KISFGFFAR+GKY+ECLLCVSK+LD EGAVTG+FCF           LH
Sbjct: 824  LNNAMTGQECAKISFGFFARNGKYVECLLCVSKRLDREGAVTGLFCFLQLASHELQQALH 883

Query: 820  VQRLSEQTALKRLKVLSYIRRQIKNPLSGIIFSRKMMEGTDLGEEQKQLLHTSAQCQRQI 641
            +QRLSEQTALKRLKVL+YIRRQI+NPLSGIIFSRKM+EGT+LGEEQK +L TS+QCQRQ+
Sbjct: 884  IQRLSEQTALKRLKVLAYIRRQIRNPLSGIIFSRKMLEGTNLGEEQKNILRTSSQCQRQL 943

Query: 640  NKXXXXXXXXXXXDGYLDLEMVEFTLNEVVVASISQVMLKSNGKGIRIVNDMAEEIISEI 461
            NK           DGYLDLEM+EF L+EV+VASISQ+M+KSNGK I IVNDM E++++E 
Sbjct: 944  NKILDDTDLDSIIDGYLDLEMLEFKLHEVLVASISQIMMKSNGKNIMIVNDMVEDLLNET 1003

Query: 460  LYGDSLRLQQVLADFLLVSINYMSNGGQLGIAASLAKDRLGESVQLAHAEFRITHAGGGV 281
            LYGDS RLQQVLA+FLLV +N   +GGQL I+ +L KDR+GESVQLA  E RI+H GGGV
Sbjct: 1004 LYGDSPRLQQVLANFLLVCVNSTPSGGQLSISGTLTKDRIGESVQLALLEVRISHTGGGV 1063

Query: 280  PEELLSQMFGSDGDTDEEGISLLISRKLVKLMNGDVQYLREAGKSTFIISVELAATNK 107
            PEELLSQMFG++ +  EEGISLLISRKLVKLMNG+VQYLREAG+STFIISVELA   K
Sbjct: 1064 PEELLSQMFGTEAEASEEGISLLISRKLVKLMNGEVQYLREAGRSTFIISVELAVATK 1121


>ref|XP_002318913.1| phytochrome A family protein [Populus trichocarpa]
            gi|222857289|gb|EEE94836.1| phytochrome A family protein
            [Populus trichocarpa]
          Length = 1126

 Score = 1330 bits (3441), Expect = 0.0
 Identities = 660/838 (78%), Positives = 730/838 (87%)
 Frame = -3

Query: 2620 KNKVRMICDCNAKNVKVLQDEKLPLDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVV 2441
            KNKVRMI DC+AK+VKVLQDEKLP DLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVV
Sbjct: 284  KNKVRMIVDCHAKHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVV 343

Query: 2440 NXXXXXXXXXXXXXAQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEFEL 2261
            N              QKRKRLWGLVVCHNT+PRFVPFPLRYACEFLAQVFAIHVNKE EL
Sbjct: 344  NDGDEDGDTPDSVNPQKRKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKELEL 403

Query: 2260 ENQIIEKNMLRTQTLLCDMLMRDAPLGIVSQSPNIMDLVKCDGAALFYKNKIYRLGVTPS 2081
            ENQI+EKN+LRTQTLLCDMLMRDAPLGIV+QSPNIMDLVKCDGA LFY+NKI+RLG+TPS
Sbjct: 404  ENQIVEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAVLFYRNKIWRLGITPS 463

Query: 2080 DFHLHDVVSWLSEFHMDSTGLSTDSLYDAGYPGALALGSVVCGMAAVRINSKDMLFWFRS 1901
            D  L D+  WLSE+HMDSTGLSTDSLYDAGYPGALALG VVCGMAAVRI SKDMLFWFRS
Sbjct: 464  DLQLQDIAFWLSEYHMDSTGLSTDSLYDAGYPGALALGDVVCGMAAVRITSKDMLFWFRS 523

Query: 1900 HTAAEIRWGGAKHEPGEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILR 1721
             TAAEIRWGGAKHEPGEKDDGR+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILR
Sbjct: 524  QTAAEIRWGGAKHEPGEKDDGRRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILR 583

Query: 1720 NAFKDADAIDLNTNAIHKQLNDLKIAGMQELKAVTGEMVRLIETATAPILAVDVDGLVNG 1541
            NAFKD + +D++T  IH +L+DLKI GMQEL+AVT EMVRLIETAT PILAVDVDGLVNG
Sbjct: 584  NAFKDIETMDVDTKTIHARLSDLKIEGMQELEAVTSEMVRLIETATVPILAVDVDGLVNG 643

Query: 1540 WNTKIAELTGLPINRALGRHLLTLVEDSSAGIVKKMLHLAIQGKEEQNIQFEIKTHGSRS 1361
            WNTKI+ELTGL +++A+G+HLLTLVEDSS  IVK+ML LA+QGKEEQNIQFEIKTHGS+S
Sbjct: 644  WNTKISELTGLLVDKAIGKHLLTLVEDSSVDIVKRMLFLALQGKEEQNIQFEIKTHGSKS 703

Query: 1360 DSGPISLLVNACASKDLQENVVGVCFVAQDITGQRNVMDKFTRIEGDYKAIVQNPNPLIP 1181
            + GPI L+VNACAS+DL ENVVGVCFV QDITGQ+ VMDKFTRIEGDYKAIVQN NPLIP
Sbjct: 704  ECGPICLVVNACASRDLHENVVGVCFVGQDITGQKMVMDKFTRIEGDYKAIVQNRNPLIP 763

Query: 1180 PIFGADEFGWCSEWNAAMKKVSGWDREEVIDKMLLGEVFGINTAYCRLKNREAFVNLGIV 1001
            PIFG DEFGWCSEWN AM  ++GW REEV+DKMLLGEVFG+N A CRLKN+EAFVNLG+V
Sbjct: 764  PIFGTDEFGWCSEWNPAMTNLTGWKREEVLDKMLLGEVFGLNMACCRLKNQEAFVNLGVV 823

Query: 1000 LNNAMTGQESEKISFGFFARSGKYIECLLCVSKKLDGEGAVTGVFCFXXXXXXXXXXXLH 821
            LN AMTGQESEK+SFGFFAR+GKY+ECLLCVSKKLD EGAVTGVFCF           LH
Sbjct: 824  LNTAMTGQESEKVSFGFFARTGKYVECLLCVSKKLDREGAVTGVFCFLQLASQELQQALH 883

Query: 820  VQRLSEQTALKRLKVLSYIRRQIKNPLSGIIFSRKMMEGTDLGEEQKQLLHTSAQCQRQI 641
            VQRLSEQTALKRLK L+Y++RQI NPLSGIIFS KMMEGT+LG EQK+LLHTSAQCQ Q+
Sbjct: 884  VQRLSEQTALKRLKALAYLKRQIWNPLSGIIFSGKMMEGTELGAEQKELLHTSAQCQCQL 943

Query: 640  NKXXXXXXXXXXXDGYLDLEMVEFTLNEVVVASISQVMLKSNGKGIRIVNDMAEEIISEI 461
            +K           +GYLDLEMVEFTL EV+VA+ SQVM+KSN KGIRI+ND AEE ++E 
Sbjct: 944  SKILDDSDLDSIIEGYLDLEMVEFTLREVLVAATSQVMMKSNEKGIRIINDAAEETMAET 1003

Query: 460  LYGDSLRLQQVLADFLLVSINYMSNGGQLGIAASLAKDRLGESVQLAHAEFRITHAGGGV 281
            LYGDS+RLQQVLADFL +S+N+  +GG L ++ASL KD+LG+SV L H E RI H G G+
Sbjct: 1004 LYGDSIRLQQVLADFLQMSVNFTPSGGLLSVSASLTKDQLGQSVYLVHLELRIRHPGAGI 1063

Query: 280  PEELLSQMFGSDGDTDEEGISLLISRKLVKLMNGDVQYLREAGKSTFIISVELAATNK 107
            PE LL QMFG D D   EGISL+ISRKLVKLMNGDV+Y+REAGKS+FIISVELA  +K
Sbjct: 1064 PEALLDQMFGEDTDASVEGISLVISRKLVKLMNGDVRYMREAGKSSFIISVELAGGHK 1121


>ref|XP_010247866.1| PREDICTED: phytochrome A [Nelumbo nucifera]
          Length = 1132

 Score = 1328 bits (3438), Expect = 0.0
 Identities = 653/839 (77%), Positives = 731/839 (87%), Gaps = 1/839 (0%)
 Frame = -3

Query: 2620 KNKVRMICDCNAKNVKVLQDEKLPLDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVV 2441
            KNKVRMICDC AK+VKVLQDEKLP DLTLCGSTLRAPHSCHLQYMENM+SIASLVMAVVV
Sbjct: 284  KNKVRMICDCRAKHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMDSIASLVMAVVV 343

Query: 2440 NXXXXXXXXXXXXXAQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEFEL 2261
            N              QKRKRLWGLVVCHNTTPRFVPFPLRYACEFL QVFAIHVNKE EL
Sbjct: 344  NEGDEEGEASGSSQQQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLIQVFAIHVNKEIEL 403

Query: 2260 ENQIIEKNMLRTQTLLCDMLMRDAPLGIVSQSPNIMDLVKCDGAALFYKNKIYRLGVTPS 2081
            ENQI+EKN+LRTQTLLCDMLMRDAPLGI+SQSPN+MDLVKCDGAAL YKNKI++LG TP+
Sbjct: 404  ENQILEKNILRTQTLLCDMLMRDAPLGIISQSPNVMDLVKCDGAALLYKNKIWQLGTTPT 463

Query: 2080 DFHLHDVVSWLSEFHMDSTGLSTDSLYDAGYPGALALGSVVCGMAAVRINSKDMLFWFRS 1901
            +F +HD+ SWLSE+HMDSTGLSTDSLYDAG+PGAL+LG  VCGMAAVRI SKDMLFWFRS
Sbjct: 464  EFQIHDIASWLSEYHMDSTGLSTDSLYDAGFPGALSLGDAVCGMAAVRITSKDMLFWFRS 523

Query: 1900 HTAAEIRWGGAKHEPGEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILR 1721
            HTAAE+RWGGAKH+P EKDDGR+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILR
Sbjct: 524  HTAAEVRWGGAKHDPDEKDDGRRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILR 583

Query: 1720 NAFKDADAIDLNTNAIHKQLNDLKIAGMQELKAVTGEMVRLIETATAPILAVDVDGLVNG 1541
            NAFKD +  D  T+AIH +LNDLKI GM+EL+AVT EMVRLIETAT PILAVDVDGLVNG
Sbjct: 584  NAFKDYETADQTTSAIHSRLNDLKIEGMEELEAVTNEMVRLIETATVPILAVDVDGLVNG 643

Query: 1540 WNTKIAELTGLPINRALGRHLLTLVEDSSAGIVKKMLHLAIQGKEEQNIQFEIKTHGSRS 1361
            WNTKIAELTGLP++ A+G+HLLTLVEDSSA  VK+MLHLA+QGKEEQNIQFE+KTHGS+ 
Sbjct: 644  WNTKIAELTGLPVDLAIGKHLLTLVEDSSANTVKRMLHLALQGKEEQNIQFEMKTHGSQR 703

Query: 1360 DSGPISLLVNACASKDLQENVVGVCFVAQDITGQRNVMDKFTRIEGDYKAIVQNPNPLIP 1181
            DSGP+SL+VNAC+S+DL+ENVVGVCFVAQDIT  + VMDKFTRIEGDYKAIVQNPNPLIP
Sbjct: 704  DSGPVSLVVNACSSRDLRENVVGVCFVAQDITSHKMVMDKFTRIEGDYKAIVQNPNPLIP 763

Query: 1180 PIFGADEFGWCSEWNAAMKKVSGWDREEVIDKMLLGEVFGINTAYCRLKNREAFVNLGIV 1001
            PIFG DEFGWCSEWN AM K+SGW+RE+VIDKMLLGEVFG + A CRLKN+EAF+NLG++
Sbjct: 764  PIFGTDEFGWCSEWNPAMAKLSGWEREDVIDKMLLGEVFGTHKACCRLKNQEAFINLGVL 823

Query: 1000 LNNAMTGQESEKISFGFFARSGKYIECLLCVSKKLDGEGAVTGVFCFXXXXXXXXXXXLH 821
            LNNAMT QE+EK+SFGFF R+G Y++CLL VSKKLDGEG VTGVFCF           LH
Sbjct: 824  LNNAMTNQETEKVSFGFFGRNGVYVDCLLSVSKKLDGEGTVTGVFCFLQIASQELQQALH 883

Query: 820  VQRLSEQTALKRLKVLSYIRRQIKNPLSGIIFSRKMMEGTDLGEEQKQLLHTSAQCQRQI 641
            VQRLSE+TAL RLK L+Y++RQIKNPLSGIIFSRKMMEGTDL EEQKQLLHTSAQCQRQ+
Sbjct: 884  VQRLSEKTALNRLKSLAYMKRQIKNPLSGIIFSRKMMEGTDLDEEQKQLLHTSAQCQRQL 943

Query: 640  NKXXXXXXXXXXXDGYLDLEMVEFTLNEVVVASISQVMLKSNGKGIRIVNDMAEEIISEI 461
            NK           DG LDLEM+EFT+ +V+VASISQVM+KSN K I+I+ND  E+I+ E 
Sbjct: 944  NKILDDTDLESIMDGCLDLEMIEFTVRDVLVASISQVMIKSNAKNIQIINDSLEDILIER 1003

Query: 460  LYGDSLRLQQVLADFLLVSINYMSNGGQLGIAASLAKDRLGESVQLAHAEFRITHAGGGV 281
            LYGDSLRLQQ+LADF  +S+N+   GGQL +A SL KDRLGE V L H E RI H GGG+
Sbjct: 1004 LYGDSLRLQQILADFFSISVNFTPTGGQLILATSLTKDRLGECVHLVHLELRIIHTGGGI 1063

Query: 280  PEELLSQMFGSDGD-TDEEGISLLISRKLVKLMNGDVQYLREAGKSTFIISVELAATNK 107
            PEELLSQMF S+GD + EEG+SLL SRKL++LMNGDV+YLRE GKSTFII+VELA+  K
Sbjct: 1064 PEELLSQMFESNGDASSEEGVSLLFSRKLLRLMNGDVRYLREEGKSTFIITVELASAQK 1122


>ref|NP_001275384.1| phytochrome A [Solanum tuberosum] gi|76574169|gb|ABA46868.1|
            phytochrome A [Solanum tuberosum]
          Length = 1123

 Score = 1328 bits (3436), Expect = 0.0
 Identities = 650/838 (77%), Positives = 730/838 (87%)
 Frame = -3

Query: 2620 KNKVRMICDCNAKNVKVLQDEKLPLDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVV 2441
            KNKVRMICDC AK+VKV+QDEKLP DLTLCGSTLRAPH CHLQYMENMNS+ASLVMAVVV
Sbjct: 284  KNKVRMICDCRAKHVKVVQDEKLPFDLTLCGSTLRAPHYCHLQYMENMNSVASLVMAVVV 343

Query: 2440 NXXXXXXXXXXXXXAQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEFEL 2261
            N             +QKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE EL
Sbjct: 344  NDGDEEGESSDSSQSQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELEL 403

Query: 2260 ENQIIEKNMLRTQTLLCDMLMRDAPLGIVSQSPNIMDLVKCDGAALFYKNKIYRLGVTPS 2081
            ENQ +EKN+LRTQTLLCDMLMRDAPLGIVSQSPNIMDLVKCDGAAL YKNKI+RLG+ PS
Sbjct: 404  ENQFLEKNILRTQTLLCDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKNKIHRLGMNPS 463

Query: 2080 DFHLHDVVSWLSEFHMDSTGLSTDSLYDAGYPGALALGSVVCGMAAVRINSKDMLFWFRS 1901
            DF LHD+VSWL E+H DSTGLSTDSLYDAG+PGALALG  VCGMAAVRI+ KD LFW+RS
Sbjct: 464  DFQLHDIVSWLCEYHTDSTGLSTDSLYDAGFPGALALGDAVCGMAAVRISDKDWLFWYRS 523

Query: 1900 HTAAEIRWGGAKHEPGEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILR 1721
            HTAAE+RWGGAKHEPGEKDDGRKMHPRSSFKAFLEVVKTRS+PWKDYEMDAIHSLQLILR
Sbjct: 524  HTAAEVRWGGAKHEPGEKDDGRKMHPRSSFKAFLEVVKTRSIPWKDYEMDAIHSLQLILR 583

Query: 1720 NAFKDADAIDLNTNAIHKQLNDLKIAGMQELKAVTGEMVRLIETATAPILAVDVDGLVNG 1541
            NAFKDADA++ NTN+IH +LNDL+I GMQEL+AVT EM+RLIETA+ PI AVDVDG VNG
Sbjct: 584  NAFKDADAVNSNTNSIHTKLNDLRIDGMQELEAVTAEMIRLIETASVPIFAVDVDGQVNG 643

Query: 1540 WNTKIAELTGLPINRALGRHLLTLVEDSSAGIVKKMLHLAIQGKEEQNIQFEIKTHGSRS 1361
            WNTK+AELTGLP++ A+G+HLLTLVEDSS   V KML LA+QGKEE+N++FEIK HG   
Sbjct: 644  WNTKVAELTGLPVDEAIGKHLLTLVEDSSVDTVNKMLELALQGKEERNVEFEIKAHGPSR 703

Query: 1360 DSGPISLLVNACASKDLQENVVGVCFVAQDITGQRNVMDKFTRIEGDYKAIVQNPNPLIP 1181
            DS PISL+VNACASKD++++VVGVCF+AQDITGQ+++MDKFTRIEGDY+AI+QNP+PLIP
Sbjct: 704  DSSPISLIVNACASKDVRDSVVGVCFIAQDITGQKSIMDKFTRIEGDYRAIIQNPHPLIP 763

Query: 1180 PIFGADEFGWCSEWNAAMKKVSGWDREEVIDKMLLGEVFGINTAYCRLKNREAFVNLGIV 1001
            PIFG D+FGWCSEWN+AM K++GW R++V+DKMLLGEVFG   A CRLKN+EAFVN G++
Sbjct: 764  PIFGTDQFGWCSEWNSAMTKLTGWRRDDVMDKMLLGEVFGTQAACCRLKNQEAFVNFGVI 823

Query: 1000 LNNAMTGQESEKISFGFFARSGKYIECLLCVSKKLDGEGAVTGVFCFXXXXXXXXXXXLH 821
            LNNA+TGQESEKI FGFF R GKY+ECLLCVSK+LD EGAVTG+FCF           LH
Sbjct: 824  LNNAITGQESEKIPFGFFGRYGKYVECLLCVSKRLDKEGAVTGLFCFLQLASHELQQALH 883

Query: 820  VQRLSEQTALKRLKVLSYIRRQIKNPLSGIIFSRKMMEGTDLGEEQKQLLHTSAQCQRQI 641
            VQRLSEQTALKRLKVL+YIRRQIKNPLSGIIFS KM+EGT LGEEQK +LHTSAQCQRQ+
Sbjct: 884  VQRLSEQTALKRLKVLAYIRRQIKNPLSGIIFSWKMLEGTSLGEEQKNILHTSAQCQRQL 943

Query: 640  NKXXXXXXXXXXXDGYLDLEMVEFTLNEVVVASISQVMLKSNGKGIRIVNDMAEEIISEI 461
            NK           +GYLDLEM+EF L+EV+VASISQVM+KSNGK I I NDM E++++E 
Sbjct: 944  NKILDDTDLDSIIEGYLDLEMLEFKLHEVLVASISQVMMKSNGKNIMISNDMVEDLLNET 1003

Query: 460  LYGDSLRLQQVLADFLLVSINYMSNGGQLGIAASLAKDRLGESVQLAHAEFRITHAGGGV 281
            LYGDS RLQQVLA+FLLVS+N   +GGQL I+  L KDR+GESVQLA  EFRI H GGGV
Sbjct: 1004 LYGDSPRLQQVLANFLLVSVNSTPSGGQLSISGRLTKDRIGESVQLALLEFRIRHTGGGV 1063

Query: 280  PEELLSQMFGSDGDTDEEGISLLISRKLVKLMNGDVQYLREAGKSTFIISVELAATNK 107
            PEELLSQM GS+ D  EEGI LL+SRKLVKLMNG+VQYLREAG+STFIISVELA   K
Sbjct: 1064 PEELLSQMLGSEVDASEEGIFLLVSRKLVKLMNGEVQYLREAGRSTFIISVELAVATK 1121


>ref|XP_012088799.1| PREDICTED: phytochrome A [Jatropha curcas]
            gi|802754966|ref|XP_012088800.1| PREDICTED: phytochrome A
            [Jatropha curcas] gi|802754972|ref|XP_012088801.1|
            PREDICTED: phytochrome A [Jatropha curcas]
            gi|643708402|gb|KDP23318.1| hypothetical protein
            JCGZ_23151 [Jatropha curcas]
          Length = 1126

 Score = 1326 bits (3432), Expect = 0.0
 Identities = 658/839 (78%), Positives = 728/839 (86%), Gaps = 1/839 (0%)
 Frame = -3

Query: 2620 KNKVRMICDCNAKNVKVLQDEKLPLDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVV 2441
            KNKVRMI DC AK+VKVLQDEKLP DLTLCGSTLRAPHSCHLQYMENMNSIASLVMAV+V
Sbjct: 285  KNKVRMIVDCRAKHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVIV 344

Query: 2440 NXXXXXXXXXXXXXAQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEFEL 2261
            N              QKRKRLWGLVVCHNTTPRFVPFPLR+ACEFLAQVFAIHVNKE EL
Sbjct: 345  NEGDEDNDSPTSVQPQKRKRLWGLVVCHNTTPRFVPFPLRFACEFLAQVFAIHVNKELEL 404

Query: 2260 ENQIIEKNMLRTQTLLCDMLMRDAPLGIVSQSPNIMDLVKCDGAALFYKNKIYRLGVTPS 2081
            ENQI+EKN+LRTQTLLCDMLMRDAPLGI++QSPNIMDLVKC+GAAL YKNKI++LG TPS
Sbjct: 405  ENQIVEKNILRTQTLLCDMLMRDAPLGIMTQSPNIMDLVKCNGAALLYKNKIWKLGETPS 464

Query: 2080 DFHLHDVVSWLSEFHMDSTGLSTDSLYDAGYPGALALGSVVCGMAAVRINSKDMLFWFRS 1901
            D  + D+  WLSE+HMDSTGLSTDSLYDAGYPGAL L  VVCGMAAVRI SKDMLFWFRS
Sbjct: 465  DLQIRDIAVWLSEYHMDSTGLSTDSLYDAGYPGALTLVDVVCGMAAVRITSKDMLFWFRS 524

Query: 1900 HTAAEIRWGGAKHEPGEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILR 1721
             TAAEIRWGGAKHEPGEKDDGR+MHPRSSFKAFLEV KTRSLPWKDYEMDAIHSLQLILR
Sbjct: 525  QTAAEIRWGGAKHEPGEKDDGRRMHPRSSFKAFLEVAKTRSLPWKDYEMDAIHSLQLILR 584

Query: 1720 NAFKDADAIDLNTNAIHKQLNDLKIAGMQELKAVTGEMVRLIETATAPILAVDVDGLVNG 1541
            NA+K+ + +D++   IH +LNDLKI GMQEL+AVT EMVRLIETA  PILAVDV+GL+NG
Sbjct: 585  NAYKEVETMDMDAKTIHSRLNDLKIEGMQELEAVTSEMVRLIETAMVPILAVDVNGLLNG 644

Query: 1540 WNTKIAELTGLPINRALGRHLLTLVEDSSAGIVKKMLHLAIQGKEEQNIQFEIKTHGSRS 1361
            WNTKIAELTGLP+++A+G+HLLTLVEDSS  IVK ML LA+QGKEEQNIQFEIKTHGS+ 
Sbjct: 645  WNTKIAELTGLPVDKAIGKHLLTLVEDSSIDIVKNMLFLALQGKEEQNIQFEIKTHGSKV 704

Query: 1360 DSGPISLLVNACASKDLQENVVGVCFVAQDITGQRNVMDKFTRIEGDYKAIVQNPNPLIP 1181
            + GPISL+VNACAS+D+ ENVVGVCFVAQDITGQ+ VMD+FTRIEGDYKAIVQNPNPLIP
Sbjct: 705  EGGPISLVVNACASRDIHENVVGVCFVAQDITGQKTVMDRFTRIEGDYKAIVQNPNPLIP 764

Query: 1180 PIFGADEFGWCSEWNAAMKKVSGWDREEVIDKMLLGEVFGINTAYCRLKNREAFVNLGIV 1001
            PIFG DEFGWCSEWN AM K++GW REEVIDKMLLGEVFGINTA CRLKNREAFVNLGI+
Sbjct: 765  PIFGTDEFGWCSEWNPAMTKLTGWKREEVIDKMLLGEVFGINTACCRLKNREAFVNLGII 824

Query: 1000 LNNAMTGQESEKISFGFFARSGKYIECLLCVSKKLDGEGAVTGVFCFXXXXXXXXXXXLH 821
            LNNAMTG+E EK+SF FFAR+GKY+ECLLCV+KKLD EGAVTGVFCF           LH
Sbjct: 825  LNNAMTGREPEKVSFSFFARNGKYVECLLCVNKKLDREGAVTGVFCFLQLASQELQQALH 884

Query: 820  VQRLSEQTALKRLKVLSYIRRQIKNPLSGIIFSRKMMEGTDLGEEQKQLLHTSAQCQRQI 641
            +QRLSEQTALKRLK LSYI+RQI+NPLSGIIFSRKMMEGT+L  EQKQLLHTS  CQRQ+
Sbjct: 885  IQRLSEQTALKRLKTLSYIKRQIRNPLSGIIFSRKMMEGTELDAEQKQLLHTSTLCQRQL 944

Query: 640  NKXXXXXXXXXXXDGYLDLEMVEFTLNEVVVASISQVMLKSNGKGIRIV-NDMAEEIISE 464
            +K           + YLDLEMV FTL+EV+V+SISQV LKS GKGIRI  +D+AEEI+ E
Sbjct: 945  SKVLDDSDLDSIIESYLDLEMVAFTLHEVLVSSISQVTLKSKGKGIRITHHDVAEEIMGE 1004

Query: 463  ILYGDSLRLQQVLADFLLVSINYMSNGGQLGIAASLAKDRLGESVQLAHAEFRITHAGGG 284
              YGDS+RLQQVLADFL VS+NY   GGQL +AA+L KD+LG+S+ L H E RI H GGG
Sbjct: 1005 TFYGDSIRLQQVLADFLSVSVNYTPTGGQLILAANLTKDQLGQSIHLVHLELRIMHTGGG 1064

Query: 283  VPEELLSQMFGSDGDTDEEGISLLISRKLVKLMNGDVQYLREAGKSTFIISVELAATNK 107
            +PE LL+QMFGSDGD  EEGISLL+SR LVKLMNGDVQYLREAGKS+F+ISVELAA  K
Sbjct: 1065 IPEALLNQMFGSDGDPCEEGISLLVSRNLVKLMNGDVQYLREAGKSSFLISVELAAGQK 1123


>sp|P33530.1|PHYA1_TOBAC RecName: Full=Phytochrome A1 gi|297478|emb|CAA47284.1| type-A
            phytochrome [Nicotiana tabacum]
          Length = 1124

 Score = 1326 bits (3432), Expect = 0.0
 Identities = 653/838 (77%), Positives = 734/838 (87%)
 Frame = -3

Query: 2620 KNKVRMICDCNAKNVKVLQDEKLPLDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVV 2441
            KNKVRMICDC AK+VKV+QDEKLP DLTLCGSTLRAPH CHLQYMENM+SIASLVMAVVV
Sbjct: 284  KNKVRMICDCRAKHVKVVQDEKLPFDLTLCGSTLRAPHYCHLQYMENMSSIASLVMAVVV 343

Query: 2440 NXXXXXXXXXXXXXAQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEFEL 2261
            N             +QKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE EL
Sbjct: 344  NDGDEEGESSDSTQSQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELEL 403

Query: 2260 ENQIIEKNMLRTQTLLCDMLMRDAPLGIVSQSPNIMDLVKCDGAALFYKNKIYRLGVTPS 2081
            E+QI+EKN+LRTQTLLCDMLMR APLGIVSQSPNIMDLVKCDGAAL YKNKI+RLG+TPS
Sbjct: 404  ESQILEKNILRTQTLLCDMLMRVAPLGIVSQSPNIMDLVKCDGAALLYKNKIHRLGMTPS 463

Query: 2080 DFHLHDVVSWLSEFHMDSTGLSTDSLYDAGYPGALALGSVVCGMAAVRINSKDMLFWFRS 1901
            DF LHD+VSWLSE+H DSTGLSTDSLYDAG+PGALALG VVCGMAAVRI+ K  LFW+RS
Sbjct: 464  DFQLHDIVSWLSEYHTDSTGLSTDSLYDAGFPGALALGDVVCGMAAVRISDKGWLFWYRS 523

Query: 1900 HTAAEIRWGGAKHEPGEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILR 1721
            HTAAE+RWGGAKHEPGEKDDGRKMHPRSSFKAFLEVVKTRS+PWKDYEMDAIHSLQLILR
Sbjct: 524  HTAAEVRWGGAKHEPGEKDDGRKMHPRSSFKAFLEVVKTRSVPWKDYEMDAIHSLQLILR 583

Query: 1720 NAFKDADAIDLNTNAIHKQLNDLKIAGMQELKAVTGEMVRLIETATAPILAVDVDGLVNG 1541
            NA KDADA+D NTN IH +LNDLKI G+QEL+AVT EMVRLIETA+ PI AVDVDG +NG
Sbjct: 584  NASKDADAMDSNTNIIHTKLNDLKIDGLQELEAVTAEMVRLIETASVPIFAVDVDGQLNG 643

Query: 1540 WNTKIAELTGLPINRALGRHLLTLVEDSSAGIVKKMLHLAIQGKEEQNIQFEIKTHGSRS 1361
            WNTKIAELTGLP++ A+G HLLTLVEDSS   V KML LA+QGKEE+N++FEIKTHG   
Sbjct: 644  WNTKIAELTGLPVDEAIGNHLLTLVEDSSVDTVSKMLELALQGKEERNVEFEIKTHGPSG 703

Query: 1360 DSGPISLLVNACASKDLQENVVGVCFVAQDITGQRNVMDKFTRIEGDYKAIVQNPNPLIP 1181
            DS PISL+VNACAS+D+ ++VVGVCF+AQDITGQ+N+MDKFTRIEGDY+AI+QNP+PLIP
Sbjct: 704  DSSPISLIVNACASRDVGDSVVGVCFIAQDITGQKNIMDKFTRIEGDYRAIIQNPHPLIP 763

Query: 1180 PIFGADEFGWCSEWNAAMKKVSGWDREEVIDKMLLGEVFGINTAYCRLKNREAFVNLGIV 1001
            PIFG D+FGWCSEWN+AM K++GW R++VIDKMLLGEVFG   A CRLKN+EAFVN G+V
Sbjct: 764  PIFGTDQFGWCSEWNSAMTKLTGWRRDDVIDKMLLGEVFGTQAACCRLKNQEAFVNFGVV 823

Query: 1000 LNNAMTGQESEKISFGFFARSGKYIECLLCVSKKLDGEGAVTGVFCFXXXXXXXXXXXLH 821
            LNNAMTGQE  KISFGFFAR+GKY+ECLLCVSK+LD EGAVTG+FCF           LH
Sbjct: 824  LNNAMTGQECAKISFGFFARNGKYVECLLCVSKRLDREGAVTGLFCFLQLASHELQQALH 883

Query: 820  VQRLSEQTALKRLKVLSYIRRQIKNPLSGIIFSRKMMEGTDLGEEQKQLLHTSAQCQRQI 641
            +QRLSEQTALKRLKVL+YIRRQI+NPLSGIIFSRKM+EGT+LGEEQK +L TS+QCQRQ+
Sbjct: 884  IQRLSEQTALKRLKVLAYIRRQIRNPLSGIIFSRKMLEGTNLGEEQKNILRTSSQCQRQL 943

Query: 640  NKXXXXXXXXXXXDGYLDLEMVEFTLNEVVVASISQVMLKSNGKGIRIVNDMAEEIISEI 461
            NK           DGYLDLEM+EF L+EV+VASISQ+M+KSNGK I IVNDM E++++E 
Sbjct: 944  NKILDDTDLDSIIDGYLDLEMLEFKLHEVLVASISQIMMKSNGKNIMIVNDMVEDLLNET 1003

Query: 460  LYGDSLRLQQVLADFLLVSINYMSNGGQLGIAASLAKDRLGESVQLAHAEFRITHAGGGV 281
            LYGDS RLQQVLA+FLLV +N   +GGQL I+ +L KDR+GESVQLA  E RI+H GGGV
Sbjct: 1004 LYGDSPRLQQVLANFLLVCVNSTPSGGQLSISGTLTKDRIGESVQLALLEVRISHTGGGV 1063

Query: 280  PEELLSQMFGSDGDTDEEGISLLISRKLVKLMNGDVQYLREAGKSTFIISVELAATNK 107
            PEELLSQMFG++ +  EEGISLLISRKLVKLMNG+VQYLREAG+STFIISVELA   K
Sbjct: 1064 PEELLSQMFGTEAEASEEGISLLISRKLVKLMNGEVQYLREAGRSTFIISVELAVATK 1121


>ref|XP_011092216.1| PREDICTED: phytochrome A [Sesamum indicum]
            gi|747089179|ref|XP_011092218.1| PREDICTED: phytochrome A
            [Sesamum indicum]
          Length = 1122

 Score = 1324 bits (3426), Expect = 0.0
 Identities = 648/838 (77%), Positives = 737/838 (87%)
 Frame = -3

Query: 2620 KNKVRMICDCNAKNVKVLQDEKLPLDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVV 2441
            KNKVRMICDC A ++KV+QDEKLP DLTLCGSTLRAPH+CHLQYMENMNSIASLVM+VVV
Sbjct: 284  KNKVRMICDCRANHIKVVQDEKLPFDLTLCGSTLRAPHTCHLQYMENMNSIASLVMSVVV 343

Query: 2440 NXXXXXXXXXXXXXAQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEFEL 2261
            N              +KRKRLWGLVVCH+T+PRFVPFPLRYACEFLAQVFAIHVNKE EL
Sbjct: 344  NEGDEEGSDSSHP--EKRKRLWGLVVCHHTSPRFVPFPLRYACEFLAQVFAIHVNKELEL 401

Query: 2260 ENQIIEKNMLRTQTLLCDMLMRDAPLGIVSQSPNIMDLVKCDGAALFYKNKIYRLGVTPS 2081
            ENQ++EKN+LRTQTLLCDML+RDAPLGIVSQSPNIMDLVKCDGAAL YKNK YRLG+TP+
Sbjct: 402  ENQMLEKNILRTQTLLCDMLLRDAPLGIVSQSPNIMDLVKCDGAALLYKNKKYRLGLTPT 461

Query: 2080 DFHLHDVVSWLSEFHMDSTGLSTDSLYDAGYPGALALGSVVCGMAAVRINSKDMLFWFRS 1901
            DF + D+VSWL E+H DSTGLSTDSLYDAG+PGALALG  VCGMA V+I+ KD LFWFRS
Sbjct: 462  DFQIRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALALGDAVCGMAGVKISDKDWLFWFRS 521

Query: 1900 HTAAEIRWGGAKHEPGEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILR 1721
            HTAAEIRWGGAKHEPGEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILR
Sbjct: 522  HTAAEIRWGGAKHEPGEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILR 581

Query: 1720 NAFKDADAIDLNTNAIHKQLNDLKIAGMQELKAVTGEMVRLIETATAPILAVDVDGLVNG 1541
            NAFK+A+  + +TN IH +LN+L+I G+QEL+AVT EMVRLIETA+ PILAVDVDGLVNG
Sbjct: 582  NAFKEAEVKESDTNTIHTRLNELQIDGIQELEAVTSEMVRLIETASVPILAVDVDGLVNG 641

Query: 1540 WNTKIAELTGLPINRALGRHLLTLVEDSSAGIVKKMLHLAIQGKEEQNIQFEIKTHGSRS 1361
            WNTKIA+LTGLP+N A+GRH L LVE+SSA  V KML LA+QGKEE+N+QFEIKTHG RS
Sbjct: 642  WNTKIADLTGLPVNEAIGRHFLALVEESSADTVSKMLELALQGKEERNVQFEIKTHGPRS 701

Query: 1360 DSGPISLLVNACASKDLQENVVGVCFVAQDITGQRNVMDKFTRIEGDYKAIVQNPNPLIP 1181
            +SGPISL+VNACAS+D++ENVVGVCF+AQDIT Q++VMDKFTRIEGDY+AIVQNPNPLIP
Sbjct: 702  ESGPISLVVNACASRDVKENVVGVCFIAQDITAQKSVMDKFTRIEGDYRAIVQNPNPLIP 761

Query: 1180 PIFGADEFGWCSEWNAAMKKVSGWDREEVIDKMLLGEVFGINTAYCRLKNREAFVNLGIV 1001
            PIFG DEFGWCSEWNAAM K+SGW R++VI++MLLGEVFGIN A CRLKN+EA+VNLGIV
Sbjct: 762  PIFGTDEFGWCSEWNAAMTKISGWRRDDVINRMLLGEVFGINRACCRLKNQEAYVNLGIV 821

Query: 1000 LNNAMTGQESEKISFGFFARSGKYIECLLCVSKKLDGEGAVTGVFCFXXXXXXXXXXXLH 821
            LNNA+TGQ+SEKI FGFF+RSGKY+ECLLCVSKKLD EGAVTG+FCF           LH
Sbjct: 822  LNNAVTGQDSEKIPFGFFSRSGKYVECLLCVSKKLDAEGAVTGLFCFLQLASQELQQALH 881

Query: 820  VQRLSEQTALKRLKVLSYIRRQIKNPLSGIIFSRKMMEGTDLGEEQKQLLHTSAQCQRQI 641
            +QRLSEQTALKRL+VL+YIRR+I+NPLSGIIFSRKMMEGTDL +EQK LL TS  CQRQ+
Sbjct: 882  IQRLSEQTALKRLRVLAYIRREIRNPLSGIIFSRKMMEGTDLDDEQKNLLRTSLCCQRQL 941

Query: 640  NKXXXXXXXXXXXDGYLDLEMVEFTLNEVVVASISQVMLKSNGKGIRIVNDMAEEIISEI 461
            NK           +GYLDLEMVEF L EV++A+ISQVM+KSNGKGI IV+++A  + SE 
Sbjct: 942  NKILDDTDLDHIIEGYLDLEMVEFNLPEVLIAAISQVMMKSNGKGIMIVDNLAPNLSSET 1001

Query: 460  LYGDSLRLQQVLADFLLVSINYMSNGGQLGIAASLAKDRLGESVQLAHAEFRITHAGGGV 281
            LYGDSLRLQQ+LA FLL+S+ Y  +GGQLG+AASL KD +GESVQL H EFR+TH GGGV
Sbjct: 1002 LYGDSLRLQQILAAFLLISVTYTPSGGQLGVAASLTKDSIGESVQLGHLEFRMTHTGGGV 1061

Query: 280  PEELLSQMFGSDGDTDEEGISLLISRKLVKLMNGDVQYLREAGKSTFIISVELAATNK 107
            P+ELL+QMFG + DT E+GISL ISRKLVKLMNGDVQYL+EAG+STFIISVELA ++K
Sbjct: 1062 PQELLNQMFGDEADTTEDGISLFISRKLVKLMNGDVQYLKEAGRSTFIISVELAISSK 1119


>ref|XP_011023900.1| PREDICTED: phytochrome A [Populus euphratica]
          Length = 1126

 Score = 1322 bits (3422), Expect = 0.0
 Identities = 656/838 (78%), Positives = 729/838 (86%)
 Frame = -3

Query: 2620 KNKVRMICDCNAKNVKVLQDEKLPLDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVV 2441
            KNKVRMI DC+AK+VKVLQDEKLP DLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVV
Sbjct: 284  KNKVRMIVDCHAKHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVV 343

Query: 2440 NXXXXXXXXXXXXXAQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEFEL 2261
            N              QKRKRLWGLVVCHNT+PRFVPFPLRYACEFLAQVFAIHVNKE EL
Sbjct: 344  NDGDEDGDTPDSANPQKRKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKELEL 403

Query: 2260 ENQIIEKNMLRTQTLLCDMLMRDAPLGIVSQSPNIMDLVKCDGAALFYKNKIYRLGVTPS 2081
            ENQI+EKN+LRTQTLLCDMLMRDAPLGIV+QSPNIMDLVKCDGA LFY+NKI+RLG+TPS
Sbjct: 404  ENQIVEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAVLFYRNKIWRLGITPS 463

Query: 2080 DFHLHDVVSWLSEFHMDSTGLSTDSLYDAGYPGALALGSVVCGMAAVRINSKDMLFWFRS 1901
            D  L D+  WLSE+HMDSTGLSTDSLYDAGYPGALALG VVCGMAAVRI SKDMLFWFRS
Sbjct: 464  DLQLQDIAFWLSEYHMDSTGLSTDSLYDAGYPGALALGDVVCGMAAVRITSKDMLFWFRS 523

Query: 1900 HTAAEIRWGGAKHEPGEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILR 1721
             TAAEIRWGGAKHE GEKDDGR+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILR
Sbjct: 524  QTAAEIRWGGAKHELGEKDDGRRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILR 583

Query: 1720 NAFKDADAIDLNTNAIHKQLNDLKIAGMQELKAVTGEMVRLIETATAPILAVDVDGLVNG 1541
            N FKD + +D++T  IH +L+DLKI GMQEL+AVT EMVRLIETAT PILAVDVDGLVNG
Sbjct: 584  NTFKDIETMDVDTKTIHARLSDLKIEGMQELEAVTSEMVRLIETATVPILAVDVDGLVNG 643

Query: 1540 WNTKIAELTGLPINRALGRHLLTLVEDSSAGIVKKMLHLAIQGKEEQNIQFEIKTHGSRS 1361
            WNTKI+ELTGL +++A+G+HLLTLVEDSS  IVK+ML LA+QGKEEQNIQFEIKTHGS+S
Sbjct: 644  WNTKISELTGLLVDKAIGKHLLTLVEDSSVDIVKRMLFLALQGKEEQNIQFEIKTHGSKS 703

Query: 1360 DSGPISLLVNACASKDLQENVVGVCFVAQDITGQRNVMDKFTRIEGDYKAIVQNPNPLIP 1181
            + GPI L+VNACAS+DL ENVVGVCFV QDITGQ+ VMDKFTRIEGDYKAIVQN NPLIP
Sbjct: 704  ECGPICLVVNACASRDLHENVVGVCFVGQDITGQKMVMDKFTRIEGDYKAIVQNRNPLIP 763

Query: 1180 PIFGADEFGWCSEWNAAMKKVSGWDREEVIDKMLLGEVFGINTAYCRLKNREAFVNLGIV 1001
            PIFG DEFGWCSEWN AM  ++GW REEV+DKMLLGEVFG+N A CRLKN+EAFVNLG+V
Sbjct: 764  PIFGTDEFGWCSEWNPAMTNLTGWKREEVLDKMLLGEVFGLNMACCRLKNQEAFVNLGVV 823

Query: 1000 LNNAMTGQESEKISFGFFARSGKYIECLLCVSKKLDGEGAVTGVFCFXXXXXXXXXXXLH 821
            LN AMTGQESEK+SFGFFAR+GKY+ECLLCVSKKLD EGAVTGVFCF           LH
Sbjct: 824  LNTAMTGQESEKVSFGFFARTGKYVECLLCVSKKLDREGAVTGVFCFLQLASQELQQALH 883

Query: 820  VQRLSEQTALKRLKVLSYIRRQIKNPLSGIIFSRKMMEGTDLGEEQKQLLHTSAQCQRQI 641
            VQRLSEQTALKRLK L+Y+++QI+NPLSGIIFS KMMEGT+LG EQK+LLHTSAQCQ Q+
Sbjct: 884  VQRLSEQTALKRLKALAYLKKQIQNPLSGIIFSGKMMEGTELGAEQKELLHTSAQCQCQL 943

Query: 640  NKXXXXXXXXXXXDGYLDLEMVEFTLNEVVVASISQVMLKSNGKGIRIVNDMAEEIISEI 461
            +K           +GYLDLEMVEFTL EVVVA+ SQVM+KSN KGIRIVND AEE ++E 
Sbjct: 944  SKILDDSDLDSIIEGYLDLEMVEFTLREVVVAATSQVMMKSNEKGIRIVNDAAEETMAET 1003

Query: 460  LYGDSLRLQQVLADFLLVSINYMSNGGQLGIAASLAKDRLGESVQLAHAEFRITHAGGGV 281
            LYGD +RLQQVLADFLL+S+N+  +GG L ++AS +KD+LG+SV L H E RI H G G+
Sbjct: 1004 LYGDCIRLQQVLADFLLMSVNFTPSGGVLTVSASFSKDQLGQSVYLVHLELRIRHPGAGI 1063

Query: 280  PEELLSQMFGSDGDTDEEGISLLISRKLVKLMNGDVQYLREAGKSTFIISVELAATNK 107
            P+ LL QM+G D D   EGISL+ISRKLVKLMNGDV+Y+REAGKS+FIISVELA  +K
Sbjct: 1064 PQALLDQMYGEDTDASVEGISLVISRKLVKLMNGDVRYMREAGKSSFIISVELAGGHK 1121


>gb|AGT50254.1| phytochrome A2 [Ipomoea batatas]
          Length = 1127

 Score = 1322 bits (3422), Expect = 0.0
 Identities = 645/841 (76%), Positives = 738/841 (87%), Gaps = 3/841 (0%)
 Frame = -3

Query: 2620 KNKVRMICDCNAKNVKVLQDEKLPLDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVV 2441
            KNKVRMICDC AK+V+V+QDEKL +DLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVV
Sbjct: 284  KNKVRMICDCRAKHVRVVQDEKLSIDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVV 343

Query: 2440 NXXXXXXXXXXXXXAQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEFEL 2261
            N              QKRKRLWGL+VCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE EL
Sbjct: 344  NDGDDEGEASESGRIQKRKRLWGLIVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELEL 403

Query: 2260 ENQIIEKNMLRTQTLLCDMLMRDAPLGIVSQSPNIMDLVKCDGAALFYKNKIYRLGVTPS 2081
            ENQI+EKN+LRTQTLLCDMLMRDAPLGIVSQSPNIMDL+KCDGAAL +K+K++RLG+TP+
Sbjct: 404  ENQIVEKNILRTQTLLCDMLMRDAPLGIVSQSPNIMDLIKCDGAALLFKSKVHRLGITPT 463

Query: 2080 DFHLHDVVSWLSEFHMDSTGLSTDSLYDAGYPGALALGSVVCGMAAVRINSKDMLFWFRS 1901
            DF LHD+VSWLSE+HMDSTGLSTDSLYDAG+ GALALG  +CGMA+VRI+ KD LFWFRS
Sbjct: 464  DFQLHDIVSWLSEYHMDSTGLSTDSLYDAGFQGALALGDAICGMASVRISDKDWLFWFRS 523

Query: 1900 HTAAEIRWGGAKHEPGEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILR 1721
            HTAAE+RWGGAKHEP EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILR
Sbjct: 524  HTAAEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILR 583

Query: 1720 NAF-KDADAIDL--NTNAIHKQLNDLKIAGMQELKAVTGEMVRLIETATAPILAVDVDGL 1550
            NAF K+AD +D   N NAIH +LNDL+I GMQEL+AVT EMVRLIETAT PILAVDVDGL
Sbjct: 584  NAFGKEADTMDTKANANAIHSKLNDLRIDGMQELEAVTSEMVRLIETATVPILAVDVDGL 643

Query: 1549 VNGWNTKIAELTGLPINRALGRHLLTLVEDSSAGIVKKMLHLAIQGKEEQNIQFEIKTHG 1370
            VNGWNTKIAELTGL ++ A+G+H LTLVEDSS   V+KML LA+QGKEE+N+QFEIKTHG
Sbjct: 644  VNGWNTKIAELTGLTVDEAIGKHFLTLVEDSSVHNVRKMLSLALQGKEEKNVQFEIKTHG 703

Query: 1369 SRSDSGPISLLVNACASKDLQENVVGVCFVAQDITGQRNVMDKFTRIEGDYKAIVQNPNP 1190
             RS+SGPISL+VNACAS+D+QE+VVGVCF+AQDITGQ+ +MDKFTRIEGDY+AI+QNPNP
Sbjct: 704  QRSESGPISLIVNACASRDVQESVVGVCFIAQDITGQKTIMDKFTRIEGDYRAIIQNPNP 763

Query: 1189 LIPPIFGADEFGWCSEWNAAMKKVSGWDREEVIDKMLLGEVFGINTAYCRLKNREAFVNL 1010
            LIPPIFG DEFGWCSEWN+AM  +SGW R+EV+DKMLLGEVFG   A CRLKN+EAFVNL
Sbjct: 764  LIPPIFGTDEFGWCSEWNSAMTNLSGWCRDEVMDKMLLGEVFGTQKACCRLKNQEAFVNL 823

Query: 1009 GIVLNNAMTGQESEKISFGFFARSGKYIECLLCVSKKLDGEGAVTGVFCFXXXXXXXXXX 830
            G+VLNNA+TGQ SEK  FGFFAR+GKY+ECLL VSK+LD EGAVTG+FCF          
Sbjct: 824  GVVLNNAITGQVSEKTRFGFFARNGKYVECLLSVSKRLDREGAVTGLFCFLQLASQELQQ 883

Query: 829  XLHVQRLSEQTALKRLKVLSYIRRQIKNPLSGIIFSRKMMEGTDLGEEQKQLLHTSAQCQ 650
             LH Q+LSEQTA+KRLKVL+YIRRQ+KNPLSGI+FSRKM+EGT+LG++QK +LHTSAQCQ
Sbjct: 884  ALHFQKLSEQTAMKRLKVLAYIRRQVKNPLSGIMFSRKMLEGTELGKDQKSILHTSAQCQ 943

Query: 649  RQINKXXXXXXXXXXXDGYLDLEMVEFTLNEVVVASISQVMLKSNGKGIRIVNDMAEEII 470
            +Q++K           +GYLDLEMVEF L+EV+ ASISQVM KSNGK +RI+ND+A+ I+
Sbjct: 944  QQLSKVLDDTDLDCIIEGYLDLEMVEFKLDEVLQASISQVMTKSNGKSLRIINDIADNIL 1003

Query: 469  SEILYGDSLRLQQVLADFLLVSINYMSNGGQLGIAASLAKDRLGESVQLAHAEFRITHAG 290
             E LYGDSLRLQQ+L++FL V++N+  +GGQL +++ L KD  GES+QLAH EFR+TH G
Sbjct: 1004 CETLYGDSLRLQQILSEFLSVAVNFTPSGGQLALSSKLTKDNFGESIQLAHLEFRLTHTG 1063

Query: 289  GGVPEELLSQMFGSDGDTDEEGISLLISRKLVKLMNGDVQYLREAGKSTFIISVELAATN 110
            GGVPEELL+QMFGS+ D  E+GISLLISRKLVKLMNGDVQYLREAG+STFIISVELA  +
Sbjct: 1064 GGVPEELLTQMFGSEADASEDGISLLISRKLVKLMNGDVQYLREAGRSTFIISVELAVAS 1123

Query: 109  K 107
            K
Sbjct: 1124 K 1124