BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00013574
         (974 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010656902.1| PREDICTED: DNA ligase 4 isoform X2 [Vitis vi...   248   4e-63
emb|CBI17913.3| unnamed protein product [Vitis vinifera]              248   4e-63
ref|XP_002263967.1| PREDICTED: DNA ligase 4 isoform X1 [Vitis vi...   248   4e-63
ref|XP_008223923.1| PREDICTED: DNA ligase 4 [Prunus mume]             223   1e-55
gb|KDO61940.1| hypothetical protein CISIN_1g0010821mg, partial [...   221   7e-55
ref|XP_006474277.1| PREDICTED: DNA ligase 4-like isoform X1 [Cit...   220   1e-54
ref|XP_006453240.1| hypothetical protein CICLE_v10007283mg [Citr...   220   1e-54
ref|XP_006453239.1| hypothetical protein CICLE_v10007283mg [Citr...   220   1e-54
ref|XP_009359940.1| PREDICTED: DNA ligase 4 [Pyrus x bretschneid...   216   2e-53
ref|XP_011017671.1| PREDICTED: DNA ligase 4 isoform X2 [Populus ...   215   5e-53
ref|XP_009613757.1| PREDICTED: DNA ligase 4 isoform X3 [Nicotian...   209   3e-51
ref|XP_009613756.1| PREDICTED: DNA ligase 4 isoform X2 [Nicotian...   209   3e-51
ref|XP_009613755.1| PREDICTED: DNA ligase 4 isoform X1 [Nicotian...   209   3e-51
ref|XP_004297907.1| PREDICTED: DNA ligase 4 [Fragaria vesca subs...   207   8e-51
ref|XP_008388689.1| PREDICTED: DNA ligase 4 [Malus domestica]         206   2e-50
ref|XP_007225204.1| hypothetical protein PRUPE_ppa002057mg [Prun...   206   2e-50
ref|XP_006344527.1| PREDICTED: DNA ligase 4-like isoform X2 [Sol...   203   2e-49
ref|XP_009765492.1| PREDICTED: DNA ligase 4 [Nicotiana sylvestris]    202   2e-49
ref|XP_010323397.1| PREDICTED: DNA ligase 4 isoform X2 [Solanum ...   201   6e-49
ref|XP_006344526.1| PREDICTED: DNA ligase 4-like isoform X1 [Sol...   201   6e-49

>ref|XP_010656902.1| PREDICTED: DNA ligase 4 isoform X2 [Vitis vinifera]
          Length = 1044

 Score =  248 bits (634), Expect = 4e-63
 Identities = 138/325 (42%), Positives = 196/325 (60%), Gaps = 2/325 (0%)
 Frame = +2

Query: 5    DLEIAEIHQLLSNINRSEDPRIVDXXXXXXCPKDKWCRFHGCCIYFHFSLQSLNSGSKIL 184
            DL+I++I QLLSN++RS++ + +D      CPK+KW RFH CCI FH S+QS NS  ++L
Sbjct: 646  DLDISDIKQLLSNVDRSDNSKTIDYYKNKYCPKEKWSRFHDCCICFHSSIQSSNSDWELL 705

Query: 185  LELALRRMKVEXXXXXXXXXXNLSNATHVVVMSLSRSDVDFNTILNSFSADEIHFIRNRR 364
             +LALRRMK+E          NLS ATH+VV S+   D+DF+ I+ SFS  E H + N++
Sbjct: 706  SKLALRRMKLEVSMGGGKVGNNLSQATHLVVFSVPGFDLDFSDIMESFSPAEKHLLCNKK 765

Query: 365  LHIVASQWLEDCLVNEQKLEEETYSLKPDGFEES--GDCNHDFNLEDFSSLDNVEKQCAL 538
            LH+V  QWLE CL   ++L+E+ YSLKP+G EES  G+C HD ++E  S LD+VE Q  +
Sbjct: 766  LHVVGYQWLEGCLEEGRRLQEQKYSLKPEGLEESNFGECKHDIDVEAPSVLDSVENQNLV 825

Query: 539  SSPHKDGIQRKSKASLDHPRVLTLXXXXXXXXXXXXTSTTPSKGNIGVIRPRRTRARLGN 718
            S P K+G Q + KA  +   +L                 +  KG  G  + RRTR R+G 
Sbjct: 826  SFPDKEGKQGRGKAPPESISILASPKRDEKRKRGRPAGPSTKKGKAGFSQARRTRPRIG- 884

Query: 719  KPARIHEIESATNAFSSEDTVMKESEXXXXXXXXXXXXXQESPDIQEKAIVEDSKSSPRG 898
            KP +I+E ES  +A  S + + +E               +E P+IQE  IVEDS+SS RG
Sbjct: 885  KPPKIYENES--DASDSGEKMEEEGTKMGGNHAIHGVECKECPEIQETEIVEDSESSQRG 942

Query: 899  RAVDQEVTEDREQKELLDKAHEIEL 973
            +  ++EV  D  +++ LD+A +IEL
Sbjct: 943  KTEEKEVALDNVREKWLDRAQDIEL 967


>emb|CBI17913.3| unnamed protein product [Vitis vinifera]
          Length = 1163

 Score =  248 bits (634), Expect = 4e-63
 Identities = 138/325 (42%), Positives = 196/325 (60%), Gaps = 2/325 (0%)
 Frame = +2

Query: 5    DLEIAEIHQLLSNINRSEDPRIVDXXXXXXCPKDKWCRFHGCCIYFHFSLQSLNSGSKIL 184
            DL+I++I QLLSN++RS++ + +D      CPK+KW RFH CCI FH S+QS NS  ++L
Sbjct: 765  DLDISDIKQLLSNVDRSDNSKTIDYYKNKYCPKEKWSRFHDCCICFHSSIQSSNSDWELL 824

Query: 185  LELALRRMKVEXXXXXXXXXXNLSNATHVVVMSLSRSDVDFNTILNSFSADEIHFIRNRR 364
             +LALRRMK+E          NLS ATH+VV S+   D+DF+ I+ SFS  E H + N++
Sbjct: 825  SKLALRRMKLEVSMGGGKVGNNLSQATHLVVFSVPGFDLDFSDIMESFSPAEKHLLCNKK 884

Query: 365  LHIVASQWLEDCLVNEQKLEEETYSLKPDGFEES--GDCNHDFNLEDFSSLDNVEKQCAL 538
            LH+V  QWLE CL   ++L+E+ YSLKP+G EES  G+C HD ++E  S LD+VE Q  +
Sbjct: 885  LHVVGYQWLEGCLEEGRRLQEQKYSLKPEGLEESNFGECKHDIDVEAPSVLDSVENQNLV 944

Query: 539  SSPHKDGIQRKSKASLDHPRVLTLXXXXXXXXXXXXTSTTPSKGNIGVIRPRRTRARLGN 718
            S P K+G Q + KA  +   +L                 +  KG  G  + RRTR R+G 
Sbjct: 945  SFPDKEGKQGRGKAPPESISILASPKRDEKRKRGRPAGPSTKKGKAGFSQARRTRPRIG- 1003

Query: 719  KPARIHEIESATNAFSSEDTVMKESEXXXXXXXXXXXXXQESPDIQEKAIVEDSKSSPRG 898
            KP +I+E ES  +A  S + + +E               +E P+IQE  IVEDS+SS RG
Sbjct: 1004 KPPKIYENES--DASDSGEKMEEEGTKMGGNHAIHGVECKECPEIQETEIVEDSESSQRG 1061

Query: 899  RAVDQEVTEDREQKELLDKAHEIEL 973
            +  ++EV  D  +++ LD+A +IEL
Sbjct: 1062 KTEEKEVALDNVREKWLDRAQDIEL 1086


>ref|XP_002263967.1| PREDICTED: DNA ligase 4 isoform X1 [Vitis vinifera]
          Length = 1162

 Score =  248 bits (634), Expect = 4e-63
 Identities = 138/325 (42%), Positives = 196/325 (60%), Gaps = 2/325 (0%)
 Frame = +2

Query: 5    DLEIAEIHQLLSNINRSEDPRIVDXXXXXXCPKDKWCRFHGCCIYFHFSLQSLNSGSKIL 184
            DL+I++I QLLSN++RS++ + +D      CPK+KW RFH CCI FH S+QS NS  ++L
Sbjct: 764  DLDISDIKQLLSNVDRSDNSKTIDYYKNKYCPKEKWSRFHDCCICFHSSIQSSNSDWELL 823

Query: 185  LELALRRMKVEXXXXXXXXXXNLSNATHVVVMSLSRSDVDFNTILNSFSADEIHFIRNRR 364
             +LALRRMK+E          NLS ATH+VV S+   D+DF+ I+ SFS  E H + N++
Sbjct: 824  SKLALRRMKLEVSMGGGKVGNNLSQATHLVVFSVPGFDLDFSDIMESFSPAEKHLLCNKK 883

Query: 365  LHIVASQWLEDCLVNEQKLEEETYSLKPDGFEES--GDCNHDFNLEDFSSLDNVEKQCAL 538
            LH+V  QWLE CL   ++L+E+ YSLKP+G EES  G+C HD ++E  S LD+VE Q  +
Sbjct: 884  LHVVGYQWLEGCLEEGRRLQEQKYSLKPEGLEESNFGECKHDIDVEAPSVLDSVENQNLV 943

Query: 539  SSPHKDGIQRKSKASLDHPRVLTLXXXXXXXXXXXXTSTTPSKGNIGVIRPRRTRARLGN 718
            S P K+G Q + KA  +   +L                 +  KG  G  + RRTR R+G 
Sbjct: 944  SFPDKEGKQGRGKAPPESISILASPKRDEKRKRGRPAGPSTKKGKAGFSQARRTRPRIG- 1002

Query: 719  KPARIHEIESATNAFSSEDTVMKESEXXXXXXXXXXXXXQESPDIQEKAIVEDSKSSPRG 898
            KP +I+E ES  +A  S + + +E               +E P+IQE  IVEDS+SS RG
Sbjct: 1003 KPPKIYENES--DASDSGEKMEEEGTKMGGNHAIHGVECKECPEIQETEIVEDSESSQRG 1060

Query: 899  RAVDQEVTEDREQKELLDKAHEIEL 973
            +  ++EV  D  +++ LD+A +IEL
Sbjct: 1061 KTEEKEVALDNVREKWLDRAQDIEL 1085


>ref|XP_008223923.1| PREDICTED: DNA ligase 4 [Prunus mume]
          Length = 1130

 Score =  223 bits (569), Expect = 1e-55
 Identities = 125/312 (40%), Positives = 181/312 (58%), Gaps = 3/312 (0%)
 Frame = +2

Query: 2    WDLEIAEIHQLLSNINRSEDPRIVDXXXXXXCPKDKWCRFHGCCIYFHFSLQSLNSGSKI 181
            WDL++A+I QLLSN+ RS D + ++      CP +KW RFHGCCIYF+ S  SL    ++
Sbjct: 730  WDLDLADIKQLLSNMYRSADSKTINHYKKKYCPMEKWSRFHGCCIYFNPSTHSLKPDWEV 789

Query: 182  LLELALRRMKVEXXXXXXXXXXNLSNATHVVVMSLSRSDVDFNTILNSFSADEIHFIRNR 361
            LL   LRR+K++          ++++ATH+VV+S+   DVDF T+L SF+  E  F+ N+
Sbjct: 790  LLRFTLRRLKIQVLISGGRVTDSIAHATHLVVLSVQGLDVDFETLLQSFTESEKRFLHNK 849

Query: 362  RLHIVASQWLEDCLVNEQKLEEETYSLKPDGFEESG--DCNHDFNLEDFSS-LDNVEKQC 532
            +LHIV SQWLEDCL  +Q+L+EETYSLKP+G EE    +  HD +LE+  S +D ++   
Sbjct: 850  KLHIVGSQWLEDCLERDQRLQEETYSLKPNGLEECSIEEWKHDMDLEEAPSVVDTLQINN 909

Query: 533  ALSSPHKDGIQRKSKASLDHPRVLTLXXXXXXXXXXXXTSTTPSKGNIGVIRPRRTRARL 712
            + SSP+++G +   K + ++ R+L                T+ +KG  GV + RRTR R+
Sbjct: 910  SSSSPNQEGKEIGGKEAPENYRILASPERESKRKRGRPALTSMNKGKTGVNQARRTRVRI 969

Query: 713  GNKPARIHEIESATNAFSSEDTVMKESEXXXXXXXXXXXXXQESPDIQEKAIVEDSKSSP 892
            G KPA+I   ES     S ++T++ E                 S DIQE   + DS+S  
Sbjct: 970  GRKPAKISGNESDEGG-SHDNTLLVEE--VDKEERKHGMMSDASLDIQENEAIRDSESLQ 1026

Query: 893  RGRAVDQEVTED 928
            R  A  QEV ED
Sbjct: 1027 RDNAAVQEVAED 1038


>gb|KDO61940.1| hypothetical protein CISIN_1g0010821mg, partial [Citrus sinensis]
            gi|641843039|gb|KDO61941.1| hypothetical protein
            CISIN_1g0010821mg, partial [Citrus sinensis]
            gi|641843040|gb|KDO61942.1| hypothetical protein
            CISIN_1g0010821mg, partial [Citrus sinensis]
            gi|641843041|gb|KDO61943.1| hypothetical protein
            CISIN_1g0010821mg, partial [Citrus sinensis]
            gi|641843042|gb|KDO61944.1| hypothetical protein
            CISIN_1g0010821mg, partial [Citrus sinensis]
          Length = 743

 Score =  221 bits (563), Expect = 7e-55
 Identities = 130/328 (39%), Positives = 192/328 (58%), Gaps = 4/328 (1%)
 Frame = +2

Query: 2    WDLEIAEIHQLLSNINRSEDPRIVDXXXXXXCPKDKWCRFHGCCIYFHFSLQSLNSGSKI 181
            WDL++A+I QLLSN++RSEDP+ +D      CP+DKW  FHGCCIYF+ S + L+   ++
Sbjct: 348  WDLDLADIKQLLSNVDRSEDPKTIDYYKKKYCPQDKWSCFHGCCIYFYHSTEPLSPDWEV 407

Query: 182  LLELALRRMKVEXXXXXXXXXXNLSNATHVVVMSLSRSDVDFNTILNSFSADEIHFIRNR 361
            LL LALRR+K+E          NL+NATHVVV+S+   DV+FN++  SF+A E H + N+
Sbjct: 408  LLGLALRRLKLEISFHGGKVCNNLANATHVVVLSVLGYDVNFNSLTESFTAREKHLLWNK 467

Query: 362  RLHIVASQWLEDCLVNEQKLEEETYSLKPDGFEES--GDCNHDFNLEDFSS-LDNVEKQC 532
            +LH+V SQWLEDCL  EQK EE  YSLKP G +ES    C  D ++E+ SS L+  +KQ 
Sbjct: 468  KLHVVRSQWLEDCLAKEQKSEEYEYSLKPTGMQESYLELCEEDLDMEEPSSTLETSDKQN 527

Query: 533  ALSSPHKDGIQRKSK-ASLDHPRVLTLXXXXXXXXXXXXTSTTPSKGNIGVIRPRRTRAR 709
              S P  DG QR ++  S   P+                 S    K  + + R +R   R
Sbjct: 528  VSSFPDGDGKQRGTRGVSPASPK----REGKRKRGRPAGGSAKKRKSTVNLARRKRPHVR 583

Query: 710  LGNKPARIHEIESATNAFSSEDTVMKESEXXXXXXXXXXXXXQESPDIQEKAIVEDSKSS 889
              NKP++I++ ES   + +S++T  KE               +E+ + ++  +VED +S 
Sbjct: 584  --NKPSKIYQNES-DESNASDETEKKEEINREENHEDREMDDEENLETRQTNVVEDLESL 640

Query: 890  PRGRAVDQEVTEDREQKELLDKAHEIEL 973
             RG+A+ QEV +D  +++   +A +IE+
Sbjct: 641  DRGKALQQEVVKDFGKEKQTVRAPDIEM 668


>ref|XP_006474277.1| PREDICTED: DNA ligase 4-like isoform X1 [Citrus sinensis]
            gi|568840649|ref|XP_006474278.1| PREDICTED: DNA ligase
            4-like isoform X2 [Citrus sinensis]
          Length = 1174

 Score =  220 bits (561), Expect = 1e-54
 Identities = 129/328 (39%), Positives = 192/328 (58%), Gaps = 4/328 (1%)
 Frame = +2

Query: 2    WDLEIAEIHQLLSNINRSEDPRIVDXXXXXXCPKDKWCRFHGCCIYFHFSLQSLNSGSKI 181
            WDL++A+I QLLSN++RSEDP+ +D      CP+DKW  FHGCCIYF+ S + L+   ++
Sbjct: 779  WDLDLADIKQLLSNVDRSEDPKTIDYYKKKYCPQDKWSCFHGCCIYFYHSTEPLSPDWEV 838

Query: 182  LLELALRRMKVEXXXXXXXXXXNLSNATHVVVMSLSRSDVDFNTILNSFSADEIHFIRNR 361
            +L LALRR+K+E          NL+NATHVVV+S+   DV+FN++  SF+A E H + N+
Sbjct: 839  ILGLALRRLKLEISFHGGKVCNNLANATHVVVLSVLGYDVNFNSLTESFTAREKHLLWNK 898

Query: 362  RLHIVASQWLEDCLVNEQKLEEETYSLKPDGFEES--GDCNHDFNLEDFSS-LDNVEKQC 532
            +LH+V SQWLEDCL  EQK EE  YSLKP G +ES    C  D ++E+ SS L+  +KQ 
Sbjct: 899  KLHVVRSQWLEDCLAKEQKSEEYEYSLKPTGMQESYLELCEEDLDMEEPSSTLETSDKQN 958

Query: 533  ALSSPHKDGIQRKSK-ASLDHPRVLTLXXXXXXXXXXXXTSTTPSKGNIGVIRPRRTRAR 709
              S P  DG QR ++  S   P+                 S    K  + + R +R   R
Sbjct: 959  VSSFPDGDGKQRGTRGVSPASPK----REGKRKRGRPAGGSAKKRKSTVNLARRKRPHVR 1014

Query: 710  LGNKPARIHEIESATNAFSSEDTVMKESEXXXXXXXXXXXXXQESPDIQEKAIVEDSKSS 889
              NKP++I++ ES   + +S++T  KE               +E+ + ++  +VED +S 
Sbjct: 1015 --NKPSKIYQNES-DESNASDETEKKEEINREENHEDREMDDEENLETRQTNVVEDLESL 1071

Query: 890  PRGRAVDQEVTEDREQKELLDKAHEIEL 973
             RG+A+ QEV +D  +++   +A +IE+
Sbjct: 1072 DRGKALQQEVVKDFGKEKQTVRAPDIEM 1099


>ref|XP_006453240.1| hypothetical protein CICLE_v10007283mg [Citrus clementina]
            gi|568840651|ref|XP_006474279.1| PREDICTED: DNA ligase
            4-like isoform X3 [Citrus sinensis]
            gi|557556466|gb|ESR66480.1| hypothetical protein
            CICLE_v10007283mg [Citrus clementina]
          Length = 1159

 Score =  220 bits (561), Expect = 1e-54
 Identities = 129/328 (39%), Positives = 192/328 (58%), Gaps = 4/328 (1%)
 Frame = +2

Query: 2    WDLEIAEIHQLLSNINRSEDPRIVDXXXXXXCPKDKWCRFHGCCIYFHFSLQSLNSGSKI 181
            WDL++A+I QLLSN++RSEDP+ +D      CP+DKW  FHGCCIYF+ S + L+   ++
Sbjct: 764  WDLDLADIKQLLSNVDRSEDPKTIDYYKKKYCPQDKWSCFHGCCIYFYHSTEPLSPDWEV 823

Query: 182  LLELALRRMKVEXXXXXXXXXXNLSNATHVVVMSLSRSDVDFNTILNSFSADEIHFIRNR 361
            +L LALRR+K+E          NL+NATHVVV+S+   DV+FN++  SF+A E H + N+
Sbjct: 824  ILGLALRRLKLEISFHGGKVCNNLANATHVVVLSVLGYDVNFNSLTESFTAREKHLLWNK 883

Query: 362  RLHIVASQWLEDCLVNEQKLEEETYSLKPDGFEES--GDCNHDFNLEDFSS-LDNVEKQC 532
            +LH+V SQWLEDCL  EQK EE  YSLKP G +ES    C  D ++E+ SS L+  +KQ 
Sbjct: 884  KLHVVRSQWLEDCLAKEQKSEEYEYSLKPTGMQESYLELCEEDLDMEEPSSTLETSDKQN 943

Query: 533  ALSSPHKDGIQRKSK-ASLDHPRVLTLXXXXXXXXXXXXTSTTPSKGNIGVIRPRRTRAR 709
              S P  DG QR ++  S   P+                 S    K  + + R +R   R
Sbjct: 944  VSSFPDGDGKQRGTRGVSPASPK----REGKRKRGRPAGGSAKKRKSTVNLARRKRPHVR 999

Query: 710  LGNKPARIHEIESATNAFSSEDTVMKESEXXXXXXXXXXXXXQESPDIQEKAIVEDSKSS 889
              NKP++I++ ES   + +S++T  KE               +E+ + ++  +VED +S 
Sbjct: 1000 --NKPSKIYQNES-DESNASDETEKKEEINREENHEDREMDDEENLETRQTNVVEDLESL 1056

Query: 890  PRGRAVDQEVTEDREQKELLDKAHEIEL 973
             RG+A+ QEV +D  +++   +A +IE+
Sbjct: 1057 DRGKALQQEVVKDFGKEKQTVRAPDIEM 1084


>ref|XP_006453239.1| hypothetical protein CICLE_v10007283mg [Citrus clementina]
            gi|557556465|gb|ESR66479.1| hypothetical protein
            CICLE_v10007283mg [Citrus clementina]
          Length = 824

 Score =  220 bits (561), Expect = 1e-54
 Identities = 129/328 (39%), Positives = 192/328 (58%), Gaps = 4/328 (1%)
 Frame = +2

Query: 2    WDLEIAEIHQLLSNINRSEDPRIVDXXXXXXCPKDKWCRFHGCCIYFHFSLQSLNSGSKI 181
            WDL++A+I QLLSN++RSEDP+ +D      CP+DKW  FHGCCIYF+ S + L+   ++
Sbjct: 429  WDLDLADIKQLLSNVDRSEDPKTIDYYKKKYCPQDKWSCFHGCCIYFYHSTEPLSPDWEV 488

Query: 182  LLELALRRMKVEXXXXXXXXXXNLSNATHVVVMSLSRSDVDFNTILNSFSADEIHFIRNR 361
            +L LALRR+K+E          NL+NATHVVV+S+   DV+FN++  SF+A E H + N+
Sbjct: 489  ILGLALRRLKLEISFHGGKVCNNLANATHVVVLSVLGYDVNFNSLTESFTAREKHLLWNK 548

Query: 362  RLHIVASQWLEDCLVNEQKLEEETYSLKPDGFEES--GDCNHDFNLEDFSS-LDNVEKQC 532
            +LH+V SQWLEDCL  EQK EE  YSLKP G +ES    C  D ++E+ SS L+  +KQ 
Sbjct: 549  KLHVVRSQWLEDCLAKEQKSEEYEYSLKPTGMQESYLELCEEDLDMEEPSSTLETSDKQN 608

Query: 533  ALSSPHKDGIQRKSK-ASLDHPRVLTLXXXXXXXXXXXXTSTTPSKGNIGVIRPRRTRAR 709
              S P  DG QR ++  S   P+                 S    K  + + R +R   R
Sbjct: 609  VSSFPDGDGKQRGTRGVSPASPK----REGKRKRGRPAGGSAKKRKSTVNLARRKRPHVR 664

Query: 710  LGNKPARIHEIESATNAFSSEDTVMKESEXXXXXXXXXXXXXQESPDIQEKAIVEDSKSS 889
              NKP++I++ ES   + +S++T  KE               +E+ + ++  +VED +S 
Sbjct: 665  --NKPSKIYQNES-DESNASDETEKKEEINREENHEDREMDDEENLETRQTNVVEDLESL 721

Query: 890  PRGRAVDQEVTEDREQKELLDKAHEIEL 973
             RG+A+ QEV +D  +++   +A +IE+
Sbjct: 722  DRGKALQQEVVKDFGKEKQTVRAPDIEM 749


>ref|XP_009359940.1| PREDICTED: DNA ligase 4 [Pyrus x bretschneideri]
          Length = 1163

 Score =  216 bits (550), Expect = 2e-53
 Identities = 127/312 (40%), Positives = 183/312 (58%), Gaps = 3/312 (0%)
 Frame = +2

Query: 2    WDLEIAEIHQLLSNINRSEDPRIVDXXXXXXCPKDKWCRFHGCCIYFHFSLQSLNSGSKI 181
            WDL++AEI QLLSNI+RSED ++VD      CP ++W RFH CCIYF  S+ SL    ++
Sbjct: 764  WDLDLAEIKQLLSNIHRSEDSKVVDYYKKKYCPVERWSRFHDCCIYFKSSIHSLKPDWEV 823

Query: 182  LLELALRRMKVEXXXXXXXXXXNLSNATHVVVMSLSRSDVDFNTILNSFSADEIHFIRNR 361
            +L L LRR+++E          +L +ATH+VV+S+   D  F T+L SF+  +  ++ ++
Sbjct: 824  VLGLTLRRLRIEVLRGGGRVTDSLVHATHLVVLSVQGPD-GFETLLRSFTEGDKRYLHSK 882

Query: 362  RLHIVASQWLEDCLVNEQKLEEETYSLKPDGFEESG--DCNHDFNLEDF-SSLDNVEKQC 532
            RLHIV SQWLEDCL  +Q+L+EETYSLKP+G EES   +  HD  LE+    +D VE   
Sbjct: 883  RLHIVGSQWLEDCLERDQRLQEETYSLKPNGLEESNVEEWKHDMGLEEAPCDVDAVENHN 942

Query: 533  ALSSPHKDGIQRKSKASLDHPRVLTLXXXXXXXXXXXXTSTTPSKGNIGVIRPRRTRARL 712
            +   P++ G + + KA+ ++ ++L                T+ +KG   V + RR RAR+
Sbjct: 943  S-CFPNRKGKEIEVKAAPENCKMLDSPERGSKRKRGRPARTSLNKGKSTVNQARRARARI 1001

Query: 713  GNKPARIHEIESATNAFSSEDTVMKESEXXXXXXXXXXXXXQESPDIQEKAIVEDSKSSP 892
            G KPA+I   ES     S + T +   E             QES DIQE   ++DS+S  
Sbjct: 1002 GRKPAKISGNESEEGG-SHDSTSL--GEEVDLGERIHGTVGQESIDIQENEAMKDSESLQ 1058

Query: 893  RGRAVDQEVTED 928
            RG+AV+Q+V ED
Sbjct: 1059 RGKAVEQDVAED 1070


>ref|XP_011017671.1| PREDICTED: DNA ligase 4 isoform X2 [Populus euphratica]
          Length = 1197

 Score =  215 bits (547), Expect = 5e-53
 Identities = 125/328 (38%), Positives = 185/328 (56%), Gaps = 4/328 (1%)
 Frame = +2

Query: 2    WDLEIAEIHQLLSNINRSEDPRIVDXXXXXXCPKDKWCRFHGCCIYFHFSLQSLNSGSKI 181
            WDL+++++ QLLSNIN SED + +D       P +KW  FHGCC+YFH S +SL    + 
Sbjct: 772  WDLDLSDMKQLLSNINASEDAKAIDDLKKKYFPGEKWSLFHGCCVYFHISRESLTPDWES 831

Query: 182  LLELALRRMKVEXXXXXXXXXXNLSNATHVVVMSLSRSDVDFNTILNSFSADEIHFIRNR 361
            LL LA RR+K+E          N+++ATH+VV+ +  SDVDF  ++ SF+  E HF+ N+
Sbjct: 832  LLGLAFRRLKLEIFMGGGKVSNNIAHATHLVVLIVPASDVDFGFLVKSFTTAEKHFLLNK 891

Query: 362  RLHIVASQWLEDCLVNEQKLEEETYSLKPDGFEESGDCNH---DFNLEDFSSL-DNVEKQ 529
            RL+++ SQWLED L   QKL E+TY+LKP G EES +C     D ++E+ + + D  E +
Sbjct: 892  RLYVIGSQWLEDSLERGQKLPEDTYNLKPSGLEES-NCKEVVCDLDMEEATPISDGAENE 950

Query: 530  CALSSPHKDGIQRKSKASLDHPRVLTLXXXXXXXXXXXXTSTTPSKGNIGVIRPRRTRAR 709
               S    +  ++ SKA+L     L                 +  KG IG  + RRTR R
Sbjct: 951  RLPSVTDSEAKEKGSKAALKDSNKLGSLEKETTRKRGRPAGGSTKKGKIGAGQARRTRTR 1010

Query: 710  LGNKPARIHEIESATNAFSSEDTVMKESEXXXXXXXXXXXXXQESPDIQEKAIVEDSKSS 889
            + NKPA+I E  S  +     D  ++E+E             + + DIQ+   VEDS+SS
Sbjct: 1011 IANKPAKILEERSEESCL--HDDEIEENEMNEENEEIHGPVSKYNLDIQQTKKVEDSESS 1068

Query: 890  PRGRAVDQEVTEDREQKELLDKAHEIEL 973
             RG+A ++   E+R++ E LDKA  +E+
Sbjct: 1069 RRGKAKEETAEENRDE-EWLDKAPGVEM 1095


>ref|XP_009613757.1| PREDICTED: DNA ligase 4 isoform X3 [Nicotiana tomentosiformis]
          Length = 1164

 Score =  209 bits (531), Expect = 3e-51
 Identities = 127/323 (39%), Positives = 167/323 (51%), Gaps = 3/323 (0%)
 Frame = +2

Query: 5    DLEIAEIHQLLSNINRSEDPRIVDXXXXXXCPKDKWCRFHGCCIYFHFSLQSLN-SGSKI 181
            DL + +I +LLS+I  SE  + V+      CPKDKW RFHGCCIYF    Q L  S  K 
Sbjct: 774  DLSVKDIRKLLSDIEHSEYSKTVEYYKKKYCPKDKWARFHGCCIYFFIPEQCLKYSDCKA 833

Query: 182  LLELALRRMKVEXXXXXXXXXXNLSNATHVVVMSLSRSDVDFNTILNSFSADEIHFIRNR 361
            L+ELA RRMKVE          NL +ATHVVVMSL   DV+FN +LNSFS  E H + N 
Sbjct: 834  LVELATRRMKVEISVGGGKVGGNLCHATHVVVMSLPDFDVNFNEVLNSFSEAEKHVLYNT 893

Query: 362  RLHIVASQWLEDCLVNEQKLEEETYSLKPDGFEES-GDCNHDFNLEDFSSLDNVEKQC-A 535
            +LH+V ++WLED    +QKL E++YSLKP  F+ S  +  HD        L     +C  
Sbjct: 894  KLHVVRARWLEDSFKEDQKLHEDSYSLKPSNFQMSISEKRHD-------KLRGKTVKCKR 946

Query: 536  LSSPHKDGIQRKSKASLDHPRVLTLXXXXXXXXXXXXTSTTPSKGNIGVIRPRRTRARLG 715
             SSP   G+Q K++   D  + +TL            T T  +K    +  PRR R +  
Sbjct: 947  ASSPDNHGVQIKAEGISDQCQAITLPKGDRKRNRLRPTGTATAKAKPAINMPRRVRRKAT 1006

Query: 716  NKPARIHEIESATNAFSSEDTVMKESEXXXXXXXXXXXXXQESPDIQEKAIVEDSKSSPR 895
            N+ A+IHE ES  +A S E     ES+             +    IQ K + +D + SP 
Sbjct: 1007 NRRAKIHENESDESATSGEHLHNGESDGAAGTRGSHENVAEHGSGIQNKDVADDLELSPH 1066

Query: 896  GRAVDQEVTEDREQKELLDKAHE 964
            G    Q  +E    +E LD+AHE
Sbjct: 1067 GETFLQGTSECSRSRERLDEAHE 1089


>ref|XP_009613756.1| PREDICTED: DNA ligase 4 isoform X2 [Nicotiana tomentosiformis]
          Length = 1169

 Score =  209 bits (531), Expect = 3e-51
 Identities = 127/323 (39%), Positives = 167/323 (51%), Gaps = 3/323 (0%)
 Frame = +2

Query: 5    DLEIAEIHQLLSNINRSEDPRIVDXXXXXXCPKDKWCRFHGCCIYFHFSLQSLN-SGSKI 181
            DL + +I +LLS+I  SE  + V+      CPKDKW RFHGCCIYF    Q L  S  K 
Sbjct: 779  DLSVKDIRKLLSDIEHSEYSKTVEYYKKKYCPKDKWARFHGCCIYFFIPEQCLKYSDCKA 838

Query: 182  LLELALRRMKVEXXXXXXXXXXNLSNATHVVVMSLSRSDVDFNTILNSFSADEIHFIRNR 361
            L+ELA RRMKVE          NL +ATHVVVMSL   DV+FN +LNSFS  E H + N 
Sbjct: 839  LVELATRRMKVEISVGGGKVGGNLCHATHVVVMSLPDFDVNFNEVLNSFSEAEKHVLYNT 898

Query: 362  RLHIVASQWLEDCLVNEQKLEEETYSLKPDGFEES-GDCNHDFNLEDFSSLDNVEKQC-A 535
            +LH+V ++WLED    +QKL E++YSLKP  F+ S  +  HD        L     +C  
Sbjct: 899  KLHVVRARWLEDSFKEDQKLHEDSYSLKPSNFQMSISEKRHD-------KLRGKTVKCKR 951

Query: 536  LSSPHKDGIQRKSKASLDHPRVLTLXXXXXXXXXXXXTSTTPSKGNIGVIRPRRTRARLG 715
             SSP   G+Q K++   D  + +TL            T T  +K    +  PRR R +  
Sbjct: 952  ASSPDNHGVQIKAEGISDQCQAITLPKGDRKRNRLRPTGTATAKAKPAINMPRRVRRKAT 1011

Query: 716  NKPARIHEIESATNAFSSEDTVMKESEXXXXXXXXXXXXXQESPDIQEKAIVEDSKSSPR 895
            N+ A+IHE ES  +A S E     ES+             +    IQ K + +D + SP 
Sbjct: 1012 NRRAKIHENESDESATSGEHLHNGESDGAAGTRGSHENVAEHGSGIQNKDVADDLELSPH 1071

Query: 896  GRAVDQEVTEDREQKELLDKAHE 964
            G    Q  +E    +E LD+AHE
Sbjct: 1072 GETFLQGTSECSRSRERLDEAHE 1094


>ref|XP_009613755.1| PREDICTED: DNA ligase 4 isoform X1 [Nicotiana tomentosiformis]
          Length = 1170

 Score =  209 bits (531), Expect = 3e-51
 Identities = 127/323 (39%), Positives = 167/323 (51%), Gaps = 3/323 (0%)
 Frame = +2

Query: 5    DLEIAEIHQLLSNINRSEDPRIVDXXXXXXCPKDKWCRFHGCCIYFHFSLQSLN-SGSKI 181
            DL + +I +LLS+I  SE  + V+      CPKDKW RFHGCCIYF    Q L  S  K 
Sbjct: 780  DLSVKDIRKLLSDIEHSEYSKTVEYYKKKYCPKDKWARFHGCCIYFFIPEQCLKYSDCKA 839

Query: 182  LLELALRRMKVEXXXXXXXXXXNLSNATHVVVMSLSRSDVDFNTILNSFSADEIHFIRNR 361
            L+ELA RRMKVE          NL +ATHVVVMSL   DV+FN +LNSFS  E H + N 
Sbjct: 840  LVELATRRMKVEISVGGGKVGGNLCHATHVVVMSLPDFDVNFNEVLNSFSEAEKHVLYNT 899

Query: 362  RLHIVASQWLEDCLVNEQKLEEETYSLKPDGFEES-GDCNHDFNLEDFSSLDNVEKQC-A 535
            +LH+V ++WLED    +QKL E++YSLKP  F+ S  +  HD        L     +C  
Sbjct: 900  KLHVVRARWLEDSFKEDQKLHEDSYSLKPSNFQMSISEKRHD-------KLRGKTVKCKR 952

Query: 536  LSSPHKDGIQRKSKASLDHPRVLTLXXXXXXXXXXXXTSTTPSKGNIGVIRPRRTRARLG 715
             SSP   G+Q K++   D  + +TL            T T  +K    +  PRR R +  
Sbjct: 953  ASSPDNHGVQIKAEGISDQCQAITLPKGDRKRNRLRPTGTATAKAKPAINMPRRVRRKAT 1012

Query: 716  NKPARIHEIESATNAFSSEDTVMKESEXXXXXXXXXXXXXQESPDIQEKAIVEDSKSSPR 895
            N+ A+IHE ES  +A S E     ES+             +    IQ K + +D + SP 
Sbjct: 1013 NRRAKIHENESDESATSGEHLHNGESDGAAGTRGSHENVAEHGSGIQNKDVADDLELSPH 1072

Query: 896  GRAVDQEVTEDREQKELLDKAHE 964
            G    Q  +E    +E LD+AHE
Sbjct: 1073 GETFLQGTSECSRSRERLDEAHE 1095


>ref|XP_004297907.1| PREDICTED: DNA ligase 4 [Fragaria vesca subsp. vesca]
          Length = 1188

 Score =  207 bits (528), Expect = 8e-51
 Identities = 121/311 (38%), Positives = 176/311 (56%), Gaps = 2/311 (0%)
 Frame = +2

Query: 2    WDLEIAEIHQLLSNINRSEDPRIVDXXXXXXCPKDKWCRFHGCCIYFHFSLQSLNSGSKI 181
            WDL++A++ QLLSN+ RSED + ++      CP +KW RFHGCCI F+ S+ SL    ++
Sbjct: 768  WDLDLADMKQLLSNVPRSEDAKRINYYKKKYCPMEKWSRFHGCCICFNSSIHSLKPDWEV 827

Query: 182  LLELALRRMKVEXXXXXXXXXXNLSNATHVVVMSLSRSDVDFNTILNSFSADEIHFIRNR 361
            +L + +RR+K+E          NL++ATH+V++S+   DV F T+  S +  E HF+ N+
Sbjct: 828  MLGVTVRRLKIEVLMGGGRVSDNLADATHLVLLSIQGCDVGFETLSQSLTEAEKHFLHNK 887

Query: 362  RLHIVASQWLEDCLVNEQKLEEETYSLKPDGFEESG--DCNHDFNLEDFSSLDNVEKQCA 535
            RLH+V  QWLEDCL  +Q+L+EE+YSLKP G+EE    +CNHD  LE+  S DNVE Q  
Sbjct: 888  RLHVVGLQWLEDCLEKKQRLQEESYSLKPYGWEEFNIEECNHDMVLEEAPS-DNVEIQKV 946

Query: 536  LSSPHKDGIQRKSKASLDHPRVLTLXXXXXXXXXXXXTSTTPSKGNIGVIRPRRTRARLG 715
             S+  K   + +  A+ ++  +L                T  ++G  G  + RRTRAR+G
Sbjct: 947  PSASKKG--RNRGNAAQENNGILRSPERGSKRKRGRPAGT--NRGKSGATQTRRTRARIG 1002

Query: 716  NKPARIHEIESATNAFSSEDTVMKESEXXXXXXXXXXXXXQESPDIQEKAIVEDSKSSPR 895
             KPA+I   ES   + S + T  KE                 S D+Q    ++DS SS  
Sbjct: 1003 RKPAKISFHES-DESDSYDHTSFKED--VDIAEGTHEMVGDRSLDMQRNEAMKDSTSSQS 1059

Query: 896  GRAVDQEVTED 928
            G+A +QEV  D
Sbjct: 1060 GKAAEQEVVAD 1070


>ref|XP_008388689.1| PREDICTED: DNA ligase 4 [Malus domestica]
          Length = 1075

 Score =  206 bits (525), Expect = 2e-50
 Identities = 123/312 (39%), Positives = 180/312 (57%), Gaps = 3/312 (0%)
 Frame = +2

Query: 2    WDLEIAEIHQLLSNINRSEDPRIVDXXXXXXCPKDKWCRFHGCCIYFHFSLQSLNSGSKI 181
            WDL++AEI QLL NI+RSED  +V+      CP ++W RFH CCIYF  S+ SL    ++
Sbjct: 763  WDLDLAEIKQLLINIHRSEDSEVVNYYKKKYCPVERWSRFHDCCIYFKSSIHSLKPDWEV 822

Query: 182  LLELALRRMKVEXXXXXXXXXXNLSNATHVVVMSLSRSDVDFNTILNSFSADEIHFIRNR 361
            +L   LRR+++E          +L +ATH+VV+S+   D  F T+L SF+  +  ++ ++
Sbjct: 823  VLGFTLRRLRIEVLRGGGRVTDSLVHATHLVVLSVQGPD-GFETLLRSFTEADKRYLHSK 881

Query: 362  RLHIVASQWLEDCLVNEQKLEEETYSLKPDGFEESG--DCNHDFNLEDF-SSLDNVEKQC 532
            RLHIV SQWLEDCL  +Q+L+EETYSLKP G EES   +  HD  LE+    +D VE   
Sbjct: 882  RLHIVGSQWLEDCLERDQRLQEETYSLKPYGLEESNVEEWKHDMGLEEAPCDVDAVENHS 941

Query: 533  ALSSPHKDGIQRKSKASLDHPRVLTLXXXXXXXXXXXXTSTTPSKGNIGVIRPRRTRARL 712
            + S P++ G + + KA+ ++ ++L                T+ +KG   V + RR  AR+
Sbjct: 942  S-SFPNRKGKEIEVKAAPENCKILDSPERGSKRKRGRPARTSLNKGKSTVNQARRAWARI 1000

Query: 713  GNKPARIHEIESATNAFSSEDTVMKESEXXXXXXXXXXXXXQESPDIQEKAIVEDSKSSP 892
            G KPA+I   ES  +  S ++T +   E             QES DIQE   ++DS+   
Sbjct: 1001 GRKPAKISGNESEESG-SHDNTSL--GEEVDLGERIHGTVGQESIDIQENEAMKDSELLQ 1057

Query: 893  RGRAVDQEVTED 928
            RG+AV+Q+V ED
Sbjct: 1058 RGKAVEQDVAED 1069


>ref|XP_007225204.1| hypothetical protein PRUPE_ppa002057mg [Prunus persica]
            gi|462422140|gb|EMJ26403.1| hypothetical protein
            PRUPE_ppa002057mg [Prunus persica]
          Length = 723

 Score =  206 bits (524), Expect = 2e-50
 Identities = 121/324 (37%), Positives = 178/324 (54%)
 Frame = +2

Query: 2    WDLEIAEIHQLLSNINRSEDPRIVDXXXXXXCPKDKWCRFHGCCIYFHFSLQSLNSGSKI 181
            WDL++A+I QLLSN+ RSED + +D      CP +KW RFHGCCIYF  S  SL    ++
Sbjct: 365  WDLDLADIKQLLSNMYRSEDSKTIDHYKKKYCPMEKWSRFHGCCIYFIPSTHSLKPDWEV 424

Query: 182  LLELALRRMKVEXXXXXXXXXXNLSNATHVVVMSLSRSDVDFNTILNSFSADEIHFIRNR 361
            LL   LRR+K++          ++++ATH+VV+S+   DVD  T+L SF+  E  F+ N+
Sbjct: 425  LLRFTLRRLKIQVLISAGRVTDSIAHATHLVVLSVQGLDVDSGTLLQSFTESEKRFLHNK 484

Query: 362  RLHIVASQWLEDCLVNEQKLEEETYSLKPDGFEESGDCNHDFNLEDFSSLDNVEKQCALS 541
            +LHIV SQWLEDCL  +Q+L+EETYSLKP+G+EE       F++E++           L+
Sbjct: 485  KLHIVGSQWLEDCLERDQRLQEETYSLKPNGWEE-------FSIEEW----------ILA 527

Query: 542  SPHKDGIQRKSKASLDHPRVLTLXXXXXXXXXXXXTSTTPSKGNIGVIRPRRTRARLGNK 721
            SP ++  +++ + +L                      T+ +KG  GV + RRTR R+G K
Sbjct: 528  SPERESKRKRGRPAL----------------------TSMNKGKTGVNQARRTRVRIGRK 565

Query: 722  PARIHEIESATNAFSSEDTVMKESEXXXXXXXXXXXXXQESPDIQEKAIVEDSKSSPRGR 901
            PA+I   ES  +   S D  ++ +E               S DIQE   ++DS+S  R  
Sbjct: 566  PAKISGNES--DEGGSHDNTLR-AEEVDKEARKHGMMSDASLDIQENEAIKDSESLQRDN 622

Query: 902  AVDQEVTEDREQKELLDKAHEIEL 973
            A  QEV ED   ++   K   +E+
Sbjct: 623  AAVQEVAEDISFEDHSYKIPNVEM 646


>ref|XP_006344527.1| PREDICTED: DNA ligase 4-like isoform X2 [Solanum tuberosum]
          Length = 1171

 Score =  203 bits (516), Expect = 2e-49
 Identities = 129/322 (40%), Positives = 166/322 (51%), Gaps = 2/322 (0%)
 Frame = +2

Query: 5    DLEIAEIHQLLSNINRSEDPRIVDXXXXXXCPKDKWCRFHGCCIYFHFSLQSLN-SGSKI 181
            D+ I EI  LL NI   ED + V+      CPKDKW RFHGCCIYF    Q L  S  K+
Sbjct: 779  DISIEEIKLLLRNIEHLEDSKTVEYYKKKYCPKDKWARFHGCCIYFFIPKQCLEYSDCKV 838

Query: 182  LLELALRRMKVEXXXXXXXXXXNLSNATHVVVMSLSRSDVDFNTILNSFSADEIHFIRNR 361
            L+ELA+RRMKVE          NL +ATHVVVMSL   DV FN +LNSFS  E H + N 
Sbjct: 839  LVELAMRRMKVEISVGGGKVCDNLFHATHVVVMSLPEFDVKFNEVLNSFSEAEKHVLYNT 898

Query: 362  RLHIVASQWLEDCLVNEQKLEEETYSLKPDGFEES-GDCNHDFNLEDFSSLDNVEKQCAL 538
            +LH+V ++WLED    +QKL EE+YSLKP  F+ S  +  HD    D    +        
Sbjct: 899  KLHVVGARWLEDSFKEDQKLVEESYSLKPSNFQMSISEKRHDKLKGDSGKCNRP------ 952

Query: 539  SSPHKDGIQRKSKASLDHPRVLTLXXXXXXXXXXXXTSTTPSKGNIGVIRPRRTRARLGN 718
            SSP K G Q K++   D  R +TL            T +  +KG +G+  PRR + ++ +
Sbjct: 953  SSPDKHGGQIKAEGISDQGRAITLPKRGRKRDRGRPTGSATAKGKVGINIPRRVKRKVTS 1012

Query: 719  KPARIHEIESATNAFSSEDTVMKESEXXXXXXXXXXXXXQESPDIQEKAIVEDSKSSPRG 898
              A+IHE ES  +A S E     ESE                  IQ +  V+D + SP G
Sbjct: 1013 SRAKIHENESDESATSGEHLRNDESEAAVGSHESIAIRIS---GIQNEDDVQDLELSPDG 1069

Query: 899  RAVDQEVTEDREQKELLDKAHE 964
            +A      E     E LD+A+E
Sbjct: 1070 KAFPPGTAECSVIGERLDEAYE 1091


>ref|XP_009765492.1| PREDICTED: DNA ligase 4 [Nicotiana sylvestris]
          Length = 1168

 Score =  202 bits (515), Expect = 2e-49
 Identities = 123/322 (38%), Positives = 163/322 (50%), Gaps = 2/322 (0%)
 Frame = +2

Query: 5    DLEIAEIHQLLSNINRSEDPRIVDXXXXXXCPKDKWCRFHGCCIYFHFSLQSLN-SGSKI 181
            DL + +I +LLS+I RSED + V+      CPKDKW RFHGCCI F    Q L  S  K 
Sbjct: 778  DLSVKDIRKLLSDIERSEDSKTVEYYKKKYCPKDKWARFHGCCICFFIPEQCLKYSDCKA 837

Query: 182  LLELALRRMKVEXXXXXXXXXXNLSNATHVVVMSLSRSDVDFNTILNSFSADEIHFIRNR 361
            L+ELA RRMKVE          NL + THVVVMSL   DV+F+ +LNSFS  E H + N 
Sbjct: 838  LVELATRRMKVEISVGGGKVGDNLCHVTHVVVMSLPDFDVNFSEVLNSFSEAEKHVLYNT 897

Query: 362  RLHIVASQWLEDCLVNEQKLEEETYSLKPDGFEES-GDCNHDFNLEDFSSLDNVEKQCAL 538
            +LH+V + WLED    ++KL E++YSLKP  F+ S  +  HD             K    
Sbjct: 898  KLHVVRASWLEDFFKEDRKLHEDSYSLKPSNFQMSISEKRHD------KVRGKAVKCKRA 951

Query: 539  SSPHKDGIQRKSKASLDHPRVLTLXXXXXXXXXXXXTSTTPSKGNIGVIRPRRTRARLGN 718
            SSP   G+Q K++   +  + +TL            T T  +K    +  P R R +  N
Sbjct: 952  SSPDNHGVQIKAEGLSEQCQAITLPKGDRKRNRLRPTGTATAKAKPAINMPWRVRCKATN 1011

Query: 719  KPARIHEIESATNAFSSEDTVMKESEXXXXXXXXXXXXXQESPDIQEKAIVEDSKSSPRG 898
            + A+IHE ES  +A S E     ESE             +    IQ K + +D + SP G
Sbjct: 1012 RRAKIHENESDESATSGEHLHNDESEGAAGTRGSPENVGEHGSGIQNKDVADDLELSPHG 1071

Query: 899  RAVDQEVTEDREQKELLDKAHE 964
                Q  +E    +E LD+AHE
Sbjct: 1072 ETFPQGTSECSRSRERLDEAHE 1093


>ref|XP_010323397.1| PREDICTED: DNA ligase 4 isoform X2 [Solanum lycopersicum]
          Length = 1171

 Score =  201 bits (512), Expect = 6e-49
 Identities = 130/324 (40%), Positives = 167/324 (51%), Gaps = 4/324 (1%)
 Frame = +2

Query: 5    DLEIAEIHQLLSNINRSEDPRIVDXXXXXXCPKDKWCRFHGCCIYFHFSLQSLN-SGSKI 181
            D+ I EI  LL NI   ED + V+      CPKD+W RFHGCCIYF    Q L  S  K+
Sbjct: 779  DISIEEIKLLLRNIEHPEDSKTVEYYKKKYCPKDEWARFHGCCIYFFIPKQCLEYSDCKV 838

Query: 182  LLELALRRMKVEXXXXXXXXXXNLSNATHVVVMSLSRSDVDFNTILNSFSADEIHFIRNR 361
            L+ELA++RMKVE          NL +ATHVVVMSL   DV FN +LNSFS  E H + N 
Sbjct: 839  LVELAMKRMKVEISVGGGKVGDNLFHATHVVVMSLPEIDVKFNEVLNSFSEAEKHVLYNT 898

Query: 362  RLHIVASQWLEDCLVNEQKLEEETYSLKPDGFEES-GDCNHDFNLEDFSSLDNVEKQCAL 538
            +LH+V ++WLED L  +QKL EE+YSLKP  F+ S  +  HD    D       EK    
Sbjct: 899  KLHVVGARWLEDSLKEDQKLLEESYSLKPSNFQMSISEKRHDKQKGD------SEKCKRP 952

Query: 539  SSPHKDGIQRKSKASLDHPRVLTLXXXXXXXXXXXXTSTTPSKGNIGVIRPRRTRARLGN 718
            SS  K G Q K+K   D  R +TL            T +  +KG +G+  PR  + ++ +
Sbjct: 953  SSLDKHGGQIKAKGISDQGRAITLPKRGRKRDRGRPTGSATAKGKVGINIPRTVKRKVTS 1012

Query: 719  KPARIHEIESATNAFSSEDTVMKESEXXXXXXXXXXXXXQ--ESPDIQEKAIVEDSKSSP 892
              A+IHE ES  +A S E     E E                ++ D+Q+  + ED K+ P
Sbjct: 1013 SRAKIHENESDESATSCEHLRNDEGEAAVGSYETTAVRSSGVQNEDVQDLELSEDGKTLP 1072

Query: 893  RGRAVDQEVTEDREQKELLDKAHE 964
             G A      E     E LDKAHE
Sbjct: 1073 PGTA------ECSVINERLDKAHE 1090


>ref|XP_006344526.1| PREDICTED: DNA ligase 4-like isoform X1 [Solanum tuberosum]
          Length = 1172

 Score =  201 bits (512), Expect = 6e-49
 Identities = 129/323 (39%), Positives = 165/323 (51%), Gaps = 3/323 (0%)
 Frame = +2

Query: 5    DLEIAEIHQLLSNINRSEDPRIVDXXXXXXCPKDKWCRFHGCCIYFHFSLQSLN-SGSKI 181
            D+ I EI  LL NI   ED + V+      CPKDKW RFHGCCIYF    Q L  S  K+
Sbjct: 779  DISIEEIKLLLRNIEHLEDSKTVEYYKKKYCPKDKWARFHGCCIYFFIPKQCLEYSDCKV 838

Query: 182  LLELALRRMKVEXXXXXXXXXXNLSNATHVVVMSLSRSDVDFNTILNSFSADEIHFIRNR 361
            L+ELA+RRMKVE          NL +ATHVVVMSL   DV FN +LNSFS  E H + N 
Sbjct: 839  LVELAMRRMKVEISVGGGKVCDNLFHATHVVVMSLPEFDVKFNEVLNSFSEAEKHVLYNT 898

Query: 362  RLHIVASQWLEDCLVNEQKLEEETYSLKPDGFEE--SGDCNHDFNLEDFSSLDNVEKQCA 535
            +LH+V ++WLED    +QKL EE+YSLKP  F+   S    HD    D    +       
Sbjct: 899  KLHVVGARWLEDSFKEDQKLVEESYSLKPSNFQMSISEKSRHDKLKGDSGKCNRP----- 953

Query: 536  LSSPHKDGIQRKSKASLDHPRVLTLXXXXXXXXXXXXTSTTPSKGNIGVIRPRRTRARLG 715
             SSP K G Q K++   D  R +TL            T +  +KG +G+  PRR + ++ 
Sbjct: 954  -SSPDKHGGQIKAEGISDQGRAITLPKRGRKRDRGRPTGSATAKGKVGINIPRRVKRKVT 1012

Query: 716  NKPARIHEIESATNAFSSEDTVMKESEXXXXXXXXXXXXXQESPDIQEKAIVEDSKSSPR 895
            +  A+IHE ES  +A S E     ESE                  IQ +  V+D + SP 
Sbjct: 1013 SSRAKIHENESDESATSGEHLRNDESEAAVGSHESIAIRIS---GIQNEDDVQDLELSPD 1069

Query: 896  GRAVDQEVTEDREQKELLDKAHE 964
            G+A      E     E LD+A+E
Sbjct: 1070 GKAFPPGTAECSVIGERLDEAYE 1092