BLASTX nr result
ID: Cornus23_contig00013573
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cornus23_contig00013573
(403 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010656902.1| PREDICTED: DNA ligase 4 isoform X2 [Vitis vi... 75 2e-11
emb|CBI17913.3| unnamed protein product [Vitis vinifera] 75 2e-11
ref|XP_002263967.1| PREDICTED: DNA ligase 4 isoform X1 [Vitis vi... 75 2e-11
ref|XP_002534602.1| conserved hypothetical protein [Ricinus comm... 66 9e-09
ref|XP_008223923.1| PREDICTED: DNA ligase 4 [Prunus mume] 64 4e-08
ref|XP_007225204.1| hypothetical protein PRUPE_ppa002057mg [Prun... 64 4e-08
ref|XP_012068473.1| PREDICTED: DNA ligase 4 [Jatropha curcas] 64 6e-08
gb|KDP41107.1| hypothetical protein JCGZ_03237 [Jatropha curcas] 64 6e-08
ref|XP_010111548.1| DNA ligase 4 [Morus notabilis] gi|587944758|... 62 1e-07
gb|KHG24358.1| DNA ligase 4 -like protein [Gossypium arboreum] 62 1e-07
ref|XP_010273585.1| PREDICTED: putative DNA ligase 4 isoform X3 ... 62 2e-07
ref|XP_010273584.1| PREDICTED: DNA ligase 4 isoform X2 [Nelumbo ... 62 2e-07
ref|XP_010273583.1| PREDICTED: DNA ligase 4 isoform X1 [Nelumbo ... 62 2e-07
ref|XP_011094107.1| PREDICTED: DNA ligase 4 [Sesamum indicum] 60 8e-07
ref|XP_007014429.1| DNA ligase IV [Theobroma cacao] gi|508784792... 60 8e-07
gb|KDO61940.1| hypothetical protein CISIN_1g0010821mg, partial [... 58 2e-06
ref|XP_006474277.1| PREDICTED: DNA ligase 4-like isoform X1 [Cit... 58 2e-06
ref|XP_006453240.1| hypothetical protein CICLE_v10007283mg [Citr... 58 2e-06
ref|XP_006453239.1| hypothetical protein CICLE_v10007283mg [Citr... 58 2e-06
ref|XP_009359940.1| PREDICTED: DNA ligase 4 [Pyrus x bretschneid... 57 5e-06
>ref|XP_010656902.1| PREDICTED: DNA ligase 4 isoform X2 [Vitis vinifera]
Length = 1044
Score = 74.7 bits (182), Expect = 2e-11
Identities = 41/84 (48%), Positives = 50/84 (59%)
Frame = -1
Query: 403 KAHEIELGSGYNAXXXXXXXXXEVMVDPVHAMLLDMIPSLGTKKVETSHPVLEDEXXXXX 224
+A +IEL S EVMVDPV AMLLDMIPSLG KK E+++P+++DE
Sbjct: 961 RAQDIELDSENKVDNSKKTEKLEVMVDPVQAMLLDMIPSLGVKKAESTNPIIDDEKPPVE 1020
Query: 223 XXXXXXXXXKISYKDVADELLKDW 152
K+SYKDVA LLKDW
Sbjct: 1021 QGAEPVKKKKVSYKDVAGALLKDW 1044
>emb|CBI17913.3| unnamed protein product [Vitis vinifera]
Length = 1163
Score = 74.7 bits (182), Expect = 2e-11
Identities = 41/84 (48%), Positives = 50/84 (59%)
Frame = -1
Query: 403 KAHEIELGSGYNAXXXXXXXXXEVMVDPVHAMLLDMIPSLGTKKVETSHPVLEDEXXXXX 224
+A +IEL S EVMVDPV AMLLDMIPSLG KK E+++P+++DE
Sbjct: 1080 RAQDIELDSENKVDNSKKTEKLEVMVDPVQAMLLDMIPSLGVKKAESTNPIIDDEKPPVE 1139
Query: 223 XXXXXXXXXKISYKDVADELLKDW 152
K+SYKDVA LLKDW
Sbjct: 1140 QGAEPVKKKKVSYKDVAGALLKDW 1163
>ref|XP_002263967.1| PREDICTED: DNA ligase 4 isoform X1 [Vitis vinifera]
Length = 1162
Score = 74.7 bits (182), Expect = 2e-11
Identities = 41/84 (48%), Positives = 50/84 (59%)
Frame = -1
Query: 403 KAHEIELGSGYNAXXXXXXXXXEVMVDPVHAMLLDMIPSLGTKKVETSHPVLEDEXXXXX 224
+A +IEL S EVMVDPV AMLLDMIPSLG KK E+++P+++DE
Sbjct: 1079 RAQDIELDSENKVDNSKKTEKLEVMVDPVQAMLLDMIPSLGVKKAESTNPIIDDEKPPVE 1138
Query: 223 XXXXXXXXXKISYKDVADELLKDW 152
K+SYKDVA LLKDW
Sbjct: 1139 QGAEPVKKKKVSYKDVAGALLKDW 1162
>ref|XP_002534602.1| conserved hypothetical protein [Ricinus communis]
gi|223524943|gb|EEF27780.1| conserved hypothetical
protein [Ricinus communis]
Length = 251
Score = 66.2 bits (160), Expect = 9e-09
Identities = 38/83 (45%), Positives = 47/83 (56%)
Frame = -1
Query: 403 KAHEIELGSGYNAXXXXXXXXXEVMVDPVHAMLLDMIPSLGTKKVETSHPVLEDEXXXXX 224
K H E+G ++ E+MVDP+HAMLLDMIPSLG + VE S+ V E E
Sbjct: 170 KTHS-EIGGRHDVEEKENPDKLEIMVDPIHAMLLDMIPSLGVRNVEISNQVFEREKPAGD 228
Query: 223 XXXXXXXXXKISYKDVADELLKD 155
K+SYKDVA E+LKD
Sbjct: 229 PTAQPVKKKKVSYKDVASEMLKD 251
>ref|XP_008223923.1| PREDICTED: DNA ligase 4 [Prunus mume]
Length = 1130
Score = 63.9 bits (154), Expect = 4e-08
Identities = 34/61 (55%), Positives = 38/61 (62%)
Frame = -1
Query: 334 VMVDPVHAMLLDMIPSLGTKKVETSHPVLEDEXXXXXXXXXXXXXXKISYKDVADELLKD 155
VM DPV AML DMIPSL KKVET++ +E E K+SYKDVA ELLKD
Sbjct: 1070 VMADPVQAMLFDMIPSLAMKKVETTNTSIEKEKPAVDLNAGPSKKKKVSYKDVAGELLKD 1129
Query: 154 W 152
W
Sbjct: 1130 W 1130
>ref|XP_007225204.1| hypothetical protein PRUPE_ppa002057mg [Prunus persica]
gi|462422140|gb|EMJ26403.1| hypothetical protein
PRUPE_ppa002057mg [Prunus persica]
Length = 723
Score = 63.9 bits (154), Expect = 4e-08
Identities = 34/61 (55%), Positives = 38/61 (62%)
Frame = -1
Query: 334 VMVDPVHAMLLDMIPSLGTKKVETSHPVLEDEXXXXXXXXXXXXXXKISYKDVADELLKD 155
VM DPV AML DMIPSL KKVET++ +E E K+SYKDVA ELLKD
Sbjct: 663 VMADPVQAMLFDMIPSLAMKKVETTNTSIEKEKPAVDLNAGPSKKKKVSYKDVAGELLKD 722
Query: 154 W 152
W
Sbjct: 723 W 723
>ref|XP_012068473.1| PREDICTED: DNA ligase 4 [Jatropha curcas]
Length = 1158
Score = 63.5 bits (153), Expect = 6e-08
Identities = 38/83 (45%), Positives = 43/83 (51%)
Frame = -1
Query: 403 KAHEIELGSGYNAXXXXXXXXXEVMVDPVHAMLLDMIPSLGTKKVETSHPVLEDEXXXXX 224
K I G G EVMVDPVHAMLLDMIP LG KK+E P ++E
Sbjct: 1076 KTPNIAKGEGQYGKEKENSEKLEVMVDPVHAMLLDMIPGLGMKKMEKPKPFPDNERPAID 1135
Query: 223 XXXXXXXXXKISYKDVADELLKD 155
K+SYKD+A ELLKD
Sbjct: 1136 PTAPPAKKKKVSYKDIAGELLKD 1158
>gb|KDP41107.1| hypothetical protein JCGZ_03237 [Jatropha curcas]
Length = 481
Score = 63.5 bits (153), Expect = 6e-08
Identities = 38/83 (45%), Positives = 43/83 (51%)
Frame = -1
Query: 403 KAHEIELGSGYNAXXXXXXXXXEVMVDPVHAMLLDMIPSLGTKKVETSHPVLEDEXXXXX 224
K I G G EVMVDPVHAMLLDMIP LG KK+E P ++E
Sbjct: 399 KTPNIAKGEGQYGKEKENSEKLEVMVDPVHAMLLDMIPGLGMKKMEKPKPFPDNERPAID 458
Query: 223 XXXXXXXXXKISYKDVADELLKD 155
K+SYKD+A ELLKD
Sbjct: 459 PTAPPAKKKKVSYKDIAGELLKD 481
>ref|XP_010111548.1| DNA ligase 4 [Morus notabilis] gi|587944758|gb|EXC31206.1| DNA
ligase 4 [Morus notabilis]
Length = 821
Score = 62.4 bits (150), Expect = 1e-07
Identities = 31/61 (50%), Positives = 39/61 (63%)
Frame = -1
Query: 334 VMVDPVHAMLLDMIPSLGTKKVETSHPVLEDEXXXXXXXXXXXXXXKISYKDVADELLKD 155
+M DPVHAMLLDMIP LG +KVE ++ ED+ K+SYKD+A +LLKD
Sbjct: 761 LMTDPVHAMLLDMIPRLGKEKVEITNTSTEDKKPAVDPNAPQPKKKKVSYKDIAGDLLKD 820
Query: 154 W 152
W
Sbjct: 821 W 821
>gb|KHG24358.1| DNA ligase 4 -like protein [Gossypium arboreum]
Length = 1157
Score = 62.4 bits (150), Expect = 1e-07
Identities = 43/100 (43%), Positives = 48/100 (48%), Gaps = 16/100 (16%)
Frame = -1
Query: 403 KAHEIELGSGYNAXXXXXXXXXEVMVDPVHAMLLDMIPSLGTKKVETSHP---------- 254
K +EL G EVMVDPV AMLLDMIPSLG K VET++
Sbjct: 1058 KFDHMELDEGKYGHEISNSEKLEVMVDPVQAMLLDMIPSLGIKHVETTNSVVQNEKPHMD 1117
Query: 253 ------VLEDEXXXXXXXXXXXXXXKISYKDVADELLKDW 152
V+EDE K+SYKDVA ELLKDW
Sbjct: 1118 NDADIRVVEDEKLDADFIPQPQKKKKVSYKDVAGELLKDW 1157
>ref|XP_010273585.1| PREDICTED: putative DNA ligase 4 isoform X3 [Nelumbo nucifera]
Length = 1099
Score = 61.6 bits (148), Expect = 2e-07
Identities = 34/62 (54%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Frame = -1
Query: 334 VMVDPVHAMLLDMIPSLGTKKVETSHPVLE-DEXXXXXXXXXXXXXXKISYKDVADELLK 158
+MVDPV AMLLDMIPSLG K+ET+ V+E + K+SYKDVA ELLK
Sbjct: 1038 MMVDPVQAMLLDMIPSLGVNKIETADSVIEIKKPLEDPDAEPVKKKKKVSYKDVAGELLK 1097
Query: 157 DW 152
DW
Sbjct: 1098 DW 1099
>ref|XP_010273584.1| PREDICTED: DNA ligase 4 isoform X2 [Nelumbo nucifera]
Length = 1143
Score = 61.6 bits (148), Expect = 2e-07
Identities = 34/62 (54%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Frame = -1
Query: 334 VMVDPVHAMLLDMIPSLGTKKVETSHPVLE-DEXXXXXXXXXXXXXXKISYKDVADELLK 158
+MVDPV AMLLDMIPSLG K+ET+ V+E + K+SYKDVA ELLK
Sbjct: 1082 MMVDPVQAMLLDMIPSLGVNKIETADSVIEIKKPLEDPDAEPVKKKKKVSYKDVAGELLK 1141
Query: 157 DW 152
DW
Sbjct: 1142 DW 1143
>ref|XP_010273583.1| PREDICTED: DNA ligase 4 isoform X1 [Nelumbo nucifera]
Length = 1168
Score = 61.6 bits (148), Expect = 2e-07
Identities = 34/62 (54%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Frame = -1
Query: 334 VMVDPVHAMLLDMIPSLGTKKVETSHPVLE-DEXXXXXXXXXXXXXXKISYKDVADELLK 158
+MVDPV AMLLDMIPSLG K+ET+ V+E + K+SYKDVA ELLK
Sbjct: 1107 MMVDPVQAMLLDMIPSLGVNKIETADSVIEIKKPLEDPDAEPVKKKKKVSYKDVAGELLK 1166
Query: 157 DW 152
DW
Sbjct: 1167 DW 1168
>ref|XP_011094107.1| PREDICTED: DNA ligase 4 [Sesamum indicum]
Length = 1222
Score = 59.7 bits (143), Expect = 8e-07
Identities = 39/91 (42%), Positives = 47/91 (51%), Gaps = 12/91 (13%)
Frame = -1
Query: 388 ELGSGYNAXXXXXXXXXEVMVDPVHAMLLDMIPSLGTKKVETSHPVL------------E 245
E+GSGY + VDPV AMLLDM+P L TKKVE++ PV E
Sbjct: 1133 EVGSGYGGSTCYNDRLEDT-VDPVQAMLLDMVPILATKKVESAIPVSDEVKTRHPDPAPE 1191
Query: 244 DEXXXXXXXXXXXXXXKISYKDVADELLKDW 152
+E K+SYKDVA+ELLKDW
Sbjct: 1192 EEKIPLDDETKPVKKRKVSYKDVANELLKDW 1222
>ref|XP_007014429.1| DNA ligase IV [Theobroma cacao] gi|508784792|gb|EOY32048.1| DNA
ligase IV [Theobroma cacao]
Length = 1195
Score = 59.7 bits (143), Expect = 8e-07
Identities = 37/77 (48%), Positives = 41/77 (53%), Gaps = 16/77 (20%)
Frame = -1
Query: 334 VMVDPVHAMLLDMIPSLGTKKVETSH----------------PVLEDEXXXXXXXXXXXX 203
VMVDPV AMLLDMIPSLG K VE ++ PV+ED
Sbjct: 1119 VMVDPVQAMLLDMIPSLGIKHVEATNSFVENEKPPADNNAEIPVVEDYKLDADFIAPPVK 1178
Query: 202 XXKISYKDVADELLKDW 152
K+SYKDVA ELLKDW
Sbjct: 1179 KKKVSYKDVAGELLKDW 1195
>gb|KDO61940.1| hypothetical protein CISIN_1g0010821mg, partial [Citrus sinensis]
gi|641843039|gb|KDO61941.1| hypothetical protein
CISIN_1g0010821mg, partial [Citrus sinensis]
gi|641843040|gb|KDO61942.1| hypothetical protein
CISIN_1g0010821mg, partial [Citrus sinensis]
gi|641843041|gb|KDO61943.1| hypothetical protein
CISIN_1g0010821mg, partial [Citrus sinensis]
gi|641843042|gb|KDO61944.1| hypothetical protein
CISIN_1g0010821mg, partial [Citrus sinensis]
Length = 743
Score = 58.2 bits (139), Expect = 2e-06
Identities = 29/59 (49%), Positives = 38/59 (64%)
Frame = -1
Query: 328 VDPVHAMLLDMIPSLGTKKVETSHPVLEDEXXXXXXXXXXXXXXKISYKDVADELLKDW 152
VD V AMLLDMIPSLG K +T++P+ ++E K+SYKD+A +LLKDW
Sbjct: 685 VDAVQAMLLDMIPSLGMKNEKTTNPIPKEESSSAEPSAEPTKKKKVSYKDIASKLLKDW 743
>ref|XP_006474277.1| PREDICTED: DNA ligase 4-like isoform X1 [Citrus sinensis]
gi|568840649|ref|XP_006474278.1| PREDICTED: DNA ligase
4-like isoform X2 [Citrus sinensis]
Length = 1174
Score = 58.2 bits (139), Expect = 2e-06
Identities = 29/59 (49%), Positives = 38/59 (64%)
Frame = -1
Query: 328 VDPVHAMLLDMIPSLGTKKVETSHPVLEDEXXXXXXXXXXXXXXKISYKDVADELLKDW 152
VD V AMLLDMIPSLG K +T++P+ ++E K+SYKD+A +LLKDW
Sbjct: 1116 VDAVQAMLLDMIPSLGMKNEKTTNPIPKEESSSAEPSAEPTKKKKVSYKDIASKLLKDW 1174
>ref|XP_006453240.1| hypothetical protein CICLE_v10007283mg [Citrus clementina]
gi|568840651|ref|XP_006474279.1| PREDICTED: DNA ligase
4-like isoform X3 [Citrus sinensis]
gi|557556466|gb|ESR66480.1| hypothetical protein
CICLE_v10007283mg [Citrus clementina]
Length = 1159
Score = 58.2 bits (139), Expect = 2e-06
Identities = 29/59 (49%), Positives = 38/59 (64%)
Frame = -1
Query: 328 VDPVHAMLLDMIPSLGTKKVETSHPVLEDEXXXXXXXXXXXXXXKISYKDVADELLKDW 152
VD V AMLLDMIPSLG K +T++P+ ++E K+SYKD+A +LLKDW
Sbjct: 1101 VDAVQAMLLDMIPSLGMKNEKTTNPIPKEESSSAEPSAEPTKKKKVSYKDIASKLLKDW 1159
>ref|XP_006453239.1| hypothetical protein CICLE_v10007283mg [Citrus clementina]
gi|557556465|gb|ESR66479.1| hypothetical protein
CICLE_v10007283mg [Citrus clementina]
Length = 824
Score = 58.2 bits (139), Expect = 2e-06
Identities = 29/59 (49%), Positives = 38/59 (64%)
Frame = -1
Query: 328 VDPVHAMLLDMIPSLGTKKVETSHPVLEDEXXXXXXXXXXXXXXKISYKDVADELLKDW 152
VD V AMLLDMIPSLG K +T++P+ ++E K+SYKD+A +LLKDW
Sbjct: 766 VDAVQAMLLDMIPSLGMKNEKTTNPIPKEESSSAEPSAEPTKKKKVSYKDIASKLLKDW 824
>ref|XP_009359940.1| PREDICTED: DNA ligase 4 [Pyrus x bretschneideri]
Length = 1163
Score = 57.0 bits (136), Expect = 5e-06
Identities = 36/86 (41%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
Frame = -1
Query: 403 KAHEIELGSGYNAXXXXXXXXXEVMVDPVHAMLLDMIPSLGTKKVETSHPVLEDE--XXX 230
K EI++ N E DPV AML DMIPSLG KK ET++ DE
Sbjct: 1078 KIAEIKMKEKQNVQESKKREELESTADPVEAMLFDMIPSLGRKKAETTYTSTRDEKPAPD 1137
Query: 229 XXXXXXXXXXXKISYKDVADELLKDW 152
K+SYKD+A ELLKDW
Sbjct: 1138 PIPNAGPSKKKKVSYKDIASELLKDW 1163