BLASTX nr result
ID: Cornus23_contig00013572
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cornus23_contig00013572
(265 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011041329.1| PREDICTED: DNA mismatch repair protein MSH6-... 64 3e-08
ref|XP_011041321.1| PREDICTED: DNA mismatch repair protein MSH6-... 64 3e-08
gb|KDO87011.1| hypothetical protein CISIN_1g000778mg [Citrus sin... 64 3e-08
ref|XP_006492326.1| PREDICTED: DNA mismatch repair protein MSH6-... 64 3e-08
ref|XP_006444483.1| hypothetical protein CICLE_v10018525mg [Citr... 64 3e-08
ref|XP_002320307.2| DNA mismatch repair protein MSH6-1 [Populus ... 64 3e-08
ref|XP_010087248.1| DNA mismatch repair protein Msh6-1 [Morus no... 64 4e-08
ref|XP_004229396.2| PREDICTED: uncharacterized protein LOC101243... 64 4e-08
ref|XP_009802974.1| PREDICTED: DNA mismatch repair protein MSH6 ... 64 4e-08
ref|XP_009598024.1| PREDICTED: DNA mismatch repair protein MSH6 ... 64 4e-08
ref|XP_006349194.1| PREDICTED: DNA mismatch repair protein MSH6-... 64 4e-08
gb|AAT67045.1| DNA mismatch repair protein [Petunia x hybrida] 62 2e-07
ref|XP_002515294.1| ATP binding protein, putative [Ricinus commu... 62 2e-07
ref|XP_007051089.1| MUTS isoform 1 [Theobroma cacao] gi|50870335... 60 5e-07
ref|XP_012479579.1| PREDICTED: DNA mismatch repair protein MSH6 ... 60 6e-07
ref|XP_012479571.1| PREDICTED: DNA mismatch repair protein MSH6 ... 60 6e-07
ref|XP_011465355.1| PREDICTED: DNA mismatch repair protein MSH6 ... 59 1e-06
emb|CBI36942.3| unnamed protein product [Vitis vinifera] 59 1e-06
ref|XP_002275930.1| PREDICTED: DNA mismatch repair protein MSH6 ... 59 1e-06
ref|XP_007163172.1| hypothetical protein PHAVU_001G212500g [Phas... 59 1e-06
>ref|XP_011041329.1| PREDICTED: DNA mismatch repair protein MSH6-like isoform X2 [Populus
euphratica]
Length = 1299
Score = 64.3 bits (155), Expect = 3e-08
Identities = 27/34 (79%), Positives = 31/34 (91%)
Frame = -2
Query: 117 ELVLEHFVHKVQCRGLFSTHYHPLAVDYQRDQRL 16
E VLEHFVHKVQCRG+FSTHYH LAVDYQ+D ++
Sbjct: 1146 ESVLEHFVHKVQCRGMFSTHYHRLAVDYQKDSKV 1179
>ref|XP_011041321.1| PREDICTED: DNA mismatch repair protein MSH6-like isoform X1 [Populus
euphratica]
Length = 1313
Score = 64.3 bits (155), Expect = 3e-08
Identities = 27/34 (79%), Positives = 31/34 (91%)
Frame = -2
Query: 117 ELVLEHFVHKVQCRGLFSTHYHPLAVDYQRDQRL 16
E VLEHFVHKVQCRG+FSTHYH LAVDYQ+D ++
Sbjct: 1160 ESVLEHFVHKVQCRGMFSTHYHRLAVDYQKDSKV 1193
>gb|KDO87011.1| hypothetical protein CISIN_1g000778mg [Citrus sinensis]
Length = 1288
Score = 64.3 bits (155), Expect = 3e-08
Identities = 28/34 (82%), Positives = 31/34 (91%)
Frame = -2
Query: 117 ELVLEHFVHKVQCRGLFSTHYHPLAVDYQRDQRL 16
E VLEHFVHKVQCRGLFSTHYH LAVDY++D R+
Sbjct: 1129 ESVLEHFVHKVQCRGLFSTHYHRLAVDYKKDPRV 1162
>ref|XP_006492326.1| PREDICTED: DNA mismatch repair protein MSH6-like [Citrus sinensis]
Length = 1288
Score = 64.3 bits (155), Expect = 3e-08
Identities = 28/34 (82%), Positives = 31/34 (91%)
Frame = -2
Query: 117 ELVLEHFVHKVQCRGLFSTHYHPLAVDYQRDQRL 16
E VLEHFVHKVQCRGLFSTHYH LAVDY++D R+
Sbjct: 1129 ESVLEHFVHKVQCRGLFSTHYHRLAVDYKKDPRV 1162
>ref|XP_006444483.1| hypothetical protein CICLE_v10018525mg [Citrus clementina]
gi|557546745|gb|ESR57723.1| hypothetical protein
CICLE_v10018525mg [Citrus clementina]
Length = 1288
Score = 64.3 bits (155), Expect = 3e-08
Identities = 28/34 (82%), Positives = 31/34 (91%)
Frame = -2
Query: 117 ELVLEHFVHKVQCRGLFSTHYHPLAVDYQRDQRL 16
E VLEHFVHKVQCRGLFSTHYH LAVDY++D R+
Sbjct: 1129 ESVLEHFVHKVQCRGLFSTHYHRLAVDYKKDPRV 1162
>ref|XP_002320307.2| DNA mismatch repair protein MSH6-1 [Populus trichocarpa]
gi|550324012|gb|EEE98622.2| DNA mismatch repair protein
MSH6-1 [Populus trichocarpa]
Length = 1293
Score = 64.3 bits (155), Expect = 3e-08
Identities = 27/34 (79%), Positives = 31/34 (91%)
Frame = -2
Query: 117 ELVLEHFVHKVQCRGLFSTHYHPLAVDYQRDQRL 16
E VLEHFVHKVQCRG+FSTHYH LAVDYQ+D ++
Sbjct: 1140 ESVLEHFVHKVQCRGMFSTHYHRLAVDYQKDSKV 1173
>ref|XP_010087248.1| DNA mismatch repair protein Msh6-1 [Morus notabilis]
gi|587837858|gb|EXB28598.1| DNA mismatch repair protein
Msh6-1 [Morus notabilis]
Length = 1302
Score = 63.9 bits (154), Expect = 4e-08
Identities = 27/34 (79%), Positives = 31/34 (91%)
Frame = -2
Query: 117 ELVLEHFVHKVQCRGLFSTHYHPLAVDYQRDQRL 16
E VLEHFVHKVQCRG+FSTHYH LAVDYQ+D ++
Sbjct: 1145 ESVLEHFVHKVQCRGMFSTHYHRLAVDYQKDPKV 1178
>ref|XP_004229396.2| PREDICTED: uncharacterized protein LOC101243927 [Solanum
lycopersicum]
Length = 2996
Score = 63.9 bits (154), Expect = 4e-08
Identities = 26/34 (76%), Positives = 31/34 (91%)
Frame = -2
Query: 117 ELVLEHFVHKVQCRGLFSTHYHPLAVDYQRDQRL 16
E VLEHFVHKVQCRG+FSTHYH L++DYQ+D R+
Sbjct: 2841 ESVLEHFVHKVQCRGMFSTHYHRLSIDYQKDSRV 2874
>ref|XP_009802974.1| PREDICTED: DNA mismatch repair protein MSH6 [Nicotiana sylvestris]
Length = 1314
Score = 63.9 bits (154), Expect = 4e-08
Identities = 26/34 (76%), Positives = 31/34 (91%)
Frame = -2
Query: 117 ELVLEHFVHKVQCRGLFSTHYHPLAVDYQRDQRL 16
E VLEHFVHKVQCRG+FSTHYH L++DYQ+D R+
Sbjct: 1162 ESVLEHFVHKVQCRGMFSTHYHRLSIDYQKDSRV 1195
>ref|XP_009598024.1| PREDICTED: DNA mismatch repair protein MSH6 [Nicotiana
tomentosiformis]
Length = 1306
Score = 63.9 bits (154), Expect = 4e-08
Identities = 26/34 (76%), Positives = 31/34 (91%)
Frame = -2
Query: 117 ELVLEHFVHKVQCRGLFSTHYHPLAVDYQRDQRL 16
E VLEHFVHKVQCRG+FSTHYH L++DYQ+D R+
Sbjct: 1152 ESVLEHFVHKVQCRGMFSTHYHRLSIDYQKDSRV 1185
>ref|XP_006349194.1| PREDICTED: DNA mismatch repair protein MSH6-like [Solanum tuberosum]
Length = 1308
Score = 63.9 bits (154), Expect = 4e-08
Identities = 26/34 (76%), Positives = 31/34 (91%)
Frame = -2
Query: 117 ELVLEHFVHKVQCRGLFSTHYHPLAVDYQRDQRL 16
E VLEHFVHKVQCRG+FSTHYH L++DYQ+D R+
Sbjct: 1154 ESVLEHFVHKVQCRGMFSTHYHRLSIDYQKDSRV 1187
>gb|AAT67045.1| DNA mismatch repair protein [Petunia x hybrida]
Length = 1303
Score = 62.0 bits (149), Expect = 2e-07
Identities = 25/34 (73%), Positives = 30/34 (88%)
Frame = -2
Query: 117 ELVLEHFVHKVQCRGLFSTHYHPLAVDYQRDQRL 16
E VLEHFVH VQCRG+FSTHYH L++DYQ+D R+
Sbjct: 1149 ESVLEHFVHNVQCRGMFSTHYHRLSIDYQKDSRV 1182
>ref|XP_002515294.1| ATP binding protein, putative [Ricinus communis]
gi|223545774|gb|EEF47278.1| ATP binding protein, putative
[Ricinus communis]
Length = 1306
Score = 61.6 bits (148), Expect = 2e-07
Identities = 25/34 (73%), Positives = 31/34 (91%)
Frame = -2
Query: 117 ELVLEHFVHKVQCRGLFSTHYHPLAVDYQRDQRL 16
E VLEHFVH+VQCRG+FSTHYH L+VDYQ+D ++
Sbjct: 1149 ESVLEHFVHRVQCRGMFSTHYHRLSVDYQKDPKV 1182
>ref|XP_007051089.1| MUTS isoform 1 [Theobroma cacao] gi|508703350|gb|EOX95246.1| MUTS
isoform 1 [Theobroma cacao]
Length = 1316
Score = 60.5 bits (145), Expect = 5e-07
Identities = 25/34 (73%), Positives = 30/34 (88%)
Frame = -2
Query: 117 ELVLEHFVHKVQCRGLFSTHYHPLAVDYQRDQRL 16
E VLEHFVHKVQCRG+FSTHYH LAVDY+ + ++
Sbjct: 1158 ESVLEHFVHKVQCRGMFSTHYHRLAVDYENNSKV 1191
>ref|XP_012479579.1| PREDICTED: DNA mismatch repair protein MSH6 isoform X2 [Gossypium
raimondii]
Length = 1297
Score = 60.1 bits (144), Expect = 6e-07
Identities = 25/34 (73%), Positives = 30/34 (88%)
Frame = -2
Query: 117 ELVLEHFVHKVQCRGLFSTHYHPLAVDYQRDQRL 16
E VLEHFVHKVQCRG+FSTHYH LAVDY+ + ++
Sbjct: 1141 ESVLEHFVHKVQCRGMFSTHYHRLAVDYRNNSKV 1174
>ref|XP_012479571.1| PREDICTED: DNA mismatch repair protein MSH6 isoform X1 [Gossypium
raimondii] gi|763741961|gb|KJB09460.1| hypothetical
protein B456_001G143900 [Gossypium raimondii]
Length = 1315
Score = 60.1 bits (144), Expect = 6e-07
Identities = 25/34 (73%), Positives = 30/34 (88%)
Frame = -2
Query: 117 ELVLEHFVHKVQCRGLFSTHYHPLAVDYQRDQRL 16
E VLEHFVHKVQCRG+FSTHYH LAVDY+ + ++
Sbjct: 1159 ESVLEHFVHKVQCRGMFSTHYHRLAVDYRNNSKV 1192
>ref|XP_011465355.1| PREDICTED: DNA mismatch repair protein MSH6 [Fragaria vesca subsp.
vesca]
Length = 1252
Score = 59.3 bits (142), Expect = 1e-06
Identities = 25/34 (73%), Positives = 29/34 (85%)
Frame = -2
Query: 117 ELVLEHFVHKVQCRGLFSTHYHPLAVDYQRDQRL 16
E VLEHFVHKV CRG+FSTHYH LAVDYQ + ++
Sbjct: 1094 ESVLEHFVHKVHCRGMFSTHYHRLAVDYQNNSQV 1127
>emb|CBI36942.3| unnamed protein product [Vitis vinifera]
Length = 1237
Score = 59.3 bits (142), Expect = 1e-06
Identities = 24/34 (70%), Positives = 31/34 (91%)
Frame = -2
Query: 117 ELVLEHFVHKVQCRGLFSTHYHPLAVDYQRDQRL 16
E VLEHFVHKV+CRG+FSTHYH LAVDY+++ ++
Sbjct: 1075 ESVLEHFVHKVRCRGMFSTHYHRLAVDYKKNSKV 1108
>ref|XP_002275930.1| PREDICTED: DNA mismatch repair protein MSH6 [Vitis vinifera]
Length = 1297
Score = 59.3 bits (142), Expect = 1e-06
Identities = 24/34 (70%), Positives = 31/34 (91%)
Frame = -2
Query: 117 ELVLEHFVHKVQCRGLFSTHYHPLAVDYQRDQRL 16
E VLEHFVHKV+CRG+FSTHYH LAVDY+++ ++
Sbjct: 1135 ESVLEHFVHKVRCRGMFSTHYHRLAVDYKKNSKV 1168
>ref|XP_007163172.1| hypothetical protein PHAVU_001G212500g [Phaseolus vulgaris]
gi|561036636|gb|ESW35166.1| hypothetical protein
PHAVU_001G212500g [Phaseolus vulgaris]
Length = 1291
Score = 59.3 bits (142), Expect = 1e-06
Identities = 26/34 (76%), Positives = 29/34 (85%)
Frame = -2
Query: 117 ELVLEHFVHKVQCRGLFSTHYHPLAVDYQRDQRL 16
E VLEHFV KVQCRGLFSTHYH LAVDY +D ++
Sbjct: 1135 EAVLEHFVRKVQCRGLFSTHYHRLAVDYLKDPKV 1168