BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00013531
         (794 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269865.1| PREDICTED: TATA box-binding protein-associat...    98   6e-27
emb|CAN73288.1| hypothetical protein VITISV_027088 [Vitis vinifera]    98   6e-27
ref|XP_010086553.1| hypothetical protein L484_001445 [Morus nota...    90   6e-24
ref|XP_007046104.1| Maternal effect embryo arrest 12, putative [...    85   4e-23
ref|XP_004152882.1| PREDICTED: TATA box-binding protein-associat...    87   4e-21
ref|XP_010258357.1| PREDICTED: TATA box-binding protein-associat...    78   5e-21
ref|XP_010258361.1| PREDICTED: TATA box-binding protein-associat...    78   5e-21
ref|XP_009800660.1| PREDICTED: TATA box-binding protein-associat...    82   5e-21
ref|XP_009800662.1| PREDICTED: TATA box-binding protein-associat...    82   5e-21
emb|CDP04171.1| unnamed protein product [Coffea canephora]             87   5e-21
ref|XP_009587977.1| PREDICTED: TATA box-binding protein-associat...    82   7e-21
ref|XP_009588029.1| PREDICTED: TATA box-binding protein-associat...    82   7e-21
ref|XP_004251201.1| PREDICTED: TATA box-binding protein-associat...    78   7e-21
gb|KHG20512.1| RNA polymerase I-specific transcription initiatio...    74   1e-19
ref|XP_008441871.1| PREDICTED: TATA box-binding protein-associat...    82   1e-19
ref|XP_012448211.1| PREDICTED: TATA box-binding protein-associat...    74   2e-19
ref|XP_012448213.1| PREDICTED: TATA box-binding protein-associat...    74   2e-19
gb|KJB60766.1| hypothetical protein B456_009G324500 [Gossypium r...    74   2e-19
ref|XP_008337501.1| PREDICTED: TATA box-binding protein-associat...    85   8e-19
ref|XP_011459262.1| PREDICTED: TATA box-binding protein-associat...    74   2e-18

>ref|XP_002269865.1| PREDICTED: TATA box-binding protein-associated factor RNA
           polymerase I subunit B [Vitis vinifera]
          Length = 722

 Score = 98.2 bits (243), Expect(2) = 6e-27
 Identities = 66/133 (49%), Positives = 84/133 (63%), Gaps = 12/133 (9%)
 Frame = -1

Query: 389 AIYSANHIRR---IQPKPESISLSQVQSQTRSQFWDSFKALDDHIVKKGGDLEKGFE--- 228
           AIYSA+H R+   I PKPE +S SQ      SQF ++    DD+ V+     E+      
Sbjct: 56  AIYSASHRRQRHSIAPKPEPLSQSQ------SQFLNNLTLDDDYRVENEETREETVADEV 109

Query: 227 -PTGRRDFRLGLRT---LSYKDNY--LEVRNVMGIQIMIQLQCKALVEKFKVNSMIFGLA 66
            P+G  DF LGL     LS++D Y  L +R VMG+QIMI+LQC+ALVEKFK + +I G+A
Sbjct: 110 GPSGPSDFGLGLDGSDGLSFEDYYTQLRIRYVMGVQIMIELQCQALVEKFKASPLICGVA 169

Query: 65  VTIWLRFVALTRV 27
            TIWLRFVA TRV
Sbjct: 170 GTIWLRFVATTRV 182



 Score = 50.8 bits (120), Expect(2) = 6e-27
 Identities = 19/24 (79%), Positives = 21/24 (87%)
 Frame = -3

Query: 516 HACGNVGFDDGSDGFFYCTRCGSQ 445
           H CG+VGF DG+DGFFYC RCGSQ
Sbjct: 10  HVCGSVGFSDGADGFFYCGRCGSQ 33


>emb|CAN73288.1| hypothetical protein VITISV_027088 [Vitis vinifera]
          Length = 722

 Score = 98.2 bits (243), Expect(2) = 6e-27
 Identities = 66/133 (49%), Positives = 84/133 (63%), Gaps = 12/133 (9%)
 Frame = -1

Query: 389 AIYSANHIRR---IQPKPESISLSQVQSQTRSQFWDSFKALDDHIVKKGGDLEKGFE--- 228
           AIYSA+H R+   I PKPE +S SQ      SQF ++    DD+ V+     E+      
Sbjct: 56  AIYSASHRRQRHSIAPKPEPLSQSQ------SQFLNNLTLDDDYRVENEETREETVADEV 109

Query: 227 -PTGRRDFRLGLRT---LSYKDNY--LEVRNVMGIQIMIQLQCKALVEKFKVNSMIFGLA 66
            P+G  DF LGL     LS++D Y  L +R VMG+QIMI+LQC+ALVEKFK + +I G+A
Sbjct: 110 GPSGPSDFGLGLDGSDGLSFEDYYTQLRIRYVMGVQIMIELQCQALVEKFKASPLICGVA 169

Query: 65  VTIWLRFVALTRV 27
            TIWLRFVA TRV
Sbjct: 170 GTIWLRFVATTRV 182



 Score = 50.8 bits (120), Expect(2) = 6e-27
 Identities = 19/24 (79%), Positives = 21/24 (87%)
 Frame = -3

Query: 516 HACGNVGFDDGSDGFFYCTRCGSQ 445
           H CG+VGF DG+DGFFYC RCGSQ
Sbjct: 10  HVCGSVGFSDGADGFFYCGRCGSQ 33


>ref|XP_010086553.1| hypothetical protein L484_001445 [Morus notabilis]
           gi|587829328|gb|EXB20252.1| hypothetical protein
           L484_001445 [Morus notabilis]
          Length = 761

 Score = 90.1 bits (222), Expect(3) = 6e-24
 Identities = 64/140 (45%), Positives = 83/140 (59%), Gaps = 20/140 (14%)
 Frame = -1

Query: 386 IYSANHIRRIQPKPESI----SLSQVQSQT-RSQFWDSFKALDDHIVKKGGDLEK----- 237
           +YSA H RR +P   S      +SQVQS T +SQFW +   LDD    +GGD        
Sbjct: 58  LYSATH-RRNRPVAASAIKAEPISQVQSATLQSQFWAAL-TLDDDGEGEGGDRFNRASIK 115

Query: 236 -------GFEPTGRRDF-RLGLRTLSYKDNY--LEVRNVMGIQIMIQLQCKALVEKFKVN 87
                  G  PTG RDF  +G    S+++ Y  + +R VMG+Q+MI+ QC+ALV +FKVN
Sbjct: 116 TEEIEFDGVGPTGPRDFGSVGESVPSFEEYYSDIRIRYVMGLQLMIEFQCEALVREFKVN 175

Query: 86  SMIFGLAVTIWLRFVALTRV 27
            +I GLA T+WLRFVA TRV
Sbjct: 176 PLICGLAGTVWLRFVAGTRV 195



 Score = 48.5 bits (114), Expect(3) = 6e-24
 Identities = 18/24 (75%), Positives = 19/24 (79%)
 Frame = -3

Query: 516 HACGNVGFDDGSDGFFYCTRCGSQ 445
           H CGN GF DG DGF+YC RCGSQ
Sbjct: 10  HTCGNAGFADGFDGFYYCLRCGSQ 33



 Score = 20.4 bits (41), Expect(3) = 6e-24
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = -3

Query: 27  FDDNWADEA 1
           FDD W DE+
Sbjct: 196 FDDGWVDES 204


>ref|XP_007046104.1| Maternal effect embryo arrest 12, putative [Theobroma cacao]
           gi|508710039|gb|EOY01936.1| Maternal effect embryo
           arrest 12, putative [Theobroma cacao]
          Length = 734

 Score = 85.1 bits (209), Expect(3) = 4e-23
 Identities = 60/130 (46%), Positives = 74/130 (56%), Gaps = 9/130 (6%)
 Frame = -1

Query: 389 AIYSANHIRRI-QPKPESISLSQVQSQTRSQFWDSFKAL----DDHIVKKGGDLE-KGFE 228
           A+Y A+H R   QP   S  +SQ  SQ++ QFW     +    DD+    G D    G  
Sbjct: 57  ALYLASHTRHARQPVTPSQPISQFDSQSQ-QFWSHLTQVRRDHDDNQDGMGDDAGLDGVG 115

Query: 227 PTGRRDF-RLGLRTLSYKDNYLEVRN--VMGIQIMIQLQCKALVEKFKVNSMIFGLAVTI 57
           PTG  DF    +   S +D Y EVRN  VMG+Q+MIQ QC+ALVEKF V  +I G+   I
Sbjct: 116 PTGTSDFGAYSMDGYSCEDYYKEVRNRYVMGLQMMIQAQCEALVEKFNVKPLICGIVGPI 175

Query: 56  WLRFVALTRV 27
           WLRFVA TRV
Sbjct: 176 WLRFVASTRV 185



 Score = 45.8 bits (107), Expect(3) = 4e-23
 Identities = 17/24 (70%), Positives = 20/24 (83%)
 Frame = -3

Query: 516 HACGNVGFDDGSDGFFYCTRCGSQ 445
           + CGNVG  DGSDG++YC RCGSQ
Sbjct: 11  NTCGNVGMADGSDGYYYCFRCGSQ 34



 Score = 25.4 bits (54), Expect(3) = 4e-23
 Identities = 9/9 (100%), Positives = 9/9 (100%)
 Frame = -3

Query: 27  FDDNWADEA 1
           FDDNWADEA
Sbjct: 186 FDDNWADEA 194


>ref|XP_004152882.1| PREDICTED: TATA box-binding protein-associated factor RNA
           polymerase I subunit B [Cucumis sativus]
           gi|700206129|gb|KGN61248.1| hypothetical protein
           Csa_2G074100 [Cucumis sativus]
          Length = 735

 Score = 87.0 bits (214), Expect(2) = 4e-21
 Identities = 58/136 (42%), Positives = 81/136 (59%), Gaps = 16/136 (11%)
 Frame = -1

Query: 386 IYSANHIRRIQP---KPESISLSQ-VQSQTRSQFWDSFKALDD---HIVKKGGD---LEK 237
           IYS +H RR  P   K E +S SQ +   ++S+FWDS   ++D   ++  K GD   L  
Sbjct: 59  IYSQSHTRRRNPTVLKVEPLSQSQSLFGTSQSEFWDSLNLMEDPSGNVGGKDGDIVMLND 118

Query: 236 GFEPTGRRDFRLGLRTLSYKDNYLE------VRNVMGIQIMIQLQCKALVEKFKVNSMIF 75
           G  PTG  DF  G   LS K ++ E      +R VMG+Q++++LQC+ LV++FK   +I 
Sbjct: 119 GVGPTGPEDFGSG-DVLSGKPSFEEYADEVRMRYVMGLQLIMELQCEVLVKEFKATPIIC 177

Query: 74  GLAVTIWLRFVALTRV 27
           GLA +IWLRFV  TRV
Sbjct: 178 GLAASIWLRFVTATRV 193



 Score = 42.4 bits (98), Expect(2) = 4e-21
 Identities = 15/22 (68%), Positives = 18/22 (81%)
 Frame = -3

Query: 510 CGNVGFDDGSDGFFYCTRCGSQ 445
           CG++G  DG DGFFYC +CGSQ
Sbjct: 12  CGSIGLTDGFDGFFYCLQCGSQ 33


>ref|XP_010258357.1| PREDICTED: TATA box-binding protein-associated factor RNA
           polymerase I subunit B isoform X1 [Nelumbo nucifera]
           gi|720007612|ref|XP_010258358.1| PREDICTED: TATA
           box-binding protein-associated factor RNA polymerase I
           subunit B isoform X1 [Nelumbo nucifera]
           gi|720007615|ref|XP_010258359.1| PREDICTED: TATA
           box-binding protein-associated factor RNA polymerase I
           subunit B isoform X1 [Nelumbo nucifera]
           gi|720007618|ref|XP_010258360.1| PREDICTED: TATA
           box-binding protein-associated factor RNA polymerase I
           subunit B isoform X1 [Nelumbo nucifera]
          Length = 739

 Score = 78.2 bits (191), Expect(3) = 5e-21
 Identities = 56/138 (40%), Positives = 75/138 (54%), Gaps = 17/138 (12%)
 Frame = -1

Query: 389 AIYSANHIRR-------IQPKPESISLS---QVQSQTRSQFWDSFKALDDH-----IVKK 255
           AIY+A H R        I+ +P S S     Q     +SQFW S    ++H     ++KK
Sbjct: 54  AIYTAGHRRHKFQRQTVIKVEPLSQSQPPYYQTPHTQQSQFWKSLGLSEEHPIHKAVIKK 113

Query: 254 GGDLEKGFEPTGRRDFRLGLRTLSYKDNY--LEVRNVMGIQIMIQLQCKALVEKFKVNSM 81
                +   P+   DF    R LS +D Y  + VR VMGIQ+MIQ QC+ALVEKF V+ +
Sbjct: 114 EEPDYEEMRPSVPNDFASTSRGLSPEDYYSQVRVRYVMGIQLMIQFQCQALVEKFGVSPL 173

Query: 80  IFGLAVTIWLRFVALTRV 27
           I  L+  IWLR VA++RV
Sbjct: 174 ICSLSGVIWLRLVAVSRV 191



 Score = 47.8 bits (112), Expect(3) = 5e-21
 Identities = 18/24 (75%), Positives = 20/24 (83%)
 Frame = -3

Query: 516 HACGNVGFDDGSDGFFYCTRCGSQ 445
           HACGNVG D  +DGF+YC RCGSQ
Sbjct: 8   HACGNVGLDSCNDGFYYCLRCGSQ 31



 Score = 23.1 bits (48), Expect(3) = 5e-21
 Identities = 8/9 (88%), Positives = 8/9 (88%)
 Frame = -3

Query: 27  FDDNWADEA 1
           FDD WADEA
Sbjct: 192 FDDGWADEA 200


>ref|XP_010258361.1| PREDICTED: TATA box-binding protein-associated factor RNA
           polymerase I subunit B isoform X2 [Nelumbo nucifera]
          Length = 738

 Score = 78.2 bits (191), Expect(3) = 5e-21
 Identities = 56/138 (40%), Positives = 75/138 (54%), Gaps = 17/138 (12%)
 Frame = -1

Query: 389 AIYSANHIRR-------IQPKPESISLS---QVQSQTRSQFWDSFKALDDH-----IVKK 255
           AIY+A H R        I+ +P S S     Q     +SQFW S    ++H     ++KK
Sbjct: 54  AIYTAGHRRHKFQRQTVIKVEPLSQSQPPYYQTPHTQQSQFWKSLGLSEEHPIHKAVIKK 113

Query: 254 GGDLEKGFEPTGRRDFRLGLRTLSYKDNY--LEVRNVMGIQIMIQLQCKALVEKFKVNSM 81
                +   P+   DF    R LS +D Y  + VR VMGIQ+MIQ QC+ALVEKF V+ +
Sbjct: 114 EEPDYEEMRPSVPNDFASTSRGLSPEDYYSQVRVRYVMGIQLMIQFQCQALVEKFGVSPL 173

Query: 80  IFGLAVTIWLRFVALTRV 27
           I  L+  IWLR VA++RV
Sbjct: 174 ICSLSGVIWLRLVAVSRV 191



 Score = 47.8 bits (112), Expect(3) = 5e-21
 Identities = 18/24 (75%), Positives = 20/24 (83%)
 Frame = -3

Query: 516 HACGNVGFDDGSDGFFYCTRCGSQ 445
           HACGNVG D  +DGF+YC RCGSQ
Sbjct: 8   HACGNVGLDSCNDGFYYCLRCGSQ 31



 Score = 23.1 bits (48), Expect(3) = 5e-21
 Identities = 8/9 (88%), Positives = 8/9 (88%)
 Frame = -3

Query: 27  FDDNWADEA 1
           FDD WADEA
Sbjct: 192 FDDGWADEA 200


>ref|XP_009800660.1| PREDICTED: TATA box-binding protein-associated factor RNA
           polymerase I subunit B isoform X1 [Nicotiana sylvestris]
          Length = 702

 Score = 82.0 bits (201), Expect(2) = 5e-21
 Identities = 50/123 (40%), Positives = 74/123 (60%), Gaps = 2/123 (1%)
 Frame = -1

Query: 386 IYSANHIRRIQPKPESISLSQVQSQTRSQFWDSFKALDDHIVKKGGDLEKGFEPTGRRDF 207
           IY+A   R      ++  +SQV+  ++SQ  ++   LDD+     GD   G EP G  DF
Sbjct: 54  IYAAGQRRAPTQSFQAEPVSQVKL-SQSQHLETLNTLDDNQEDNEGD---GVEPAGPTDF 109

Query: 206 RLGLRTLSYKDNY--LEVRNVMGIQIMIQLQCKALVEKFKVNSMIFGLAVTIWLRFVALT 33
                +L+Y D Y  + +R VMG+Q+MIQLQCKALVEKF V+ +I G+   +WLR++A  
Sbjct: 110 GPSQCSLTYTDYYSGVRLRYVMGVQVMIQLQCKALVEKFNVSPLIVGVVGPVWLRYLAHE 169

Query: 32  RVL 24
           +V+
Sbjct: 170 KVM 172



 Score = 47.0 bits (110), Expect(2) = 5e-21
 Identities = 17/22 (77%), Positives = 19/22 (86%)
 Frame = -3

Query: 510 CGNVGFDDGSDGFFYCTRCGSQ 445
           CGN+ F+DG DGFFYCT CGSQ
Sbjct: 12  CGNISFNDGGDGFFYCTLCGSQ 33


>ref|XP_009800662.1| PREDICTED: TATA box-binding protein-associated factor RNA
           polymerase I subunit B isoform X2 [Nicotiana sylvestris]
          Length = 701

 Score = 82.0 bits (201), Expect(2) = 5e-21
 Identities = 50/123 (40%), Positives = 74/123 (60%), Gaps = 2/123 (1%)
 Frame = -1

Query: 386 IYSANHIRRIQPKPESISLSQVQSQTRSQFWDSFKALDDHIVKKGGDLEKGFEPTGRRDF 207
           IY+A   R      ++  +SQV+  ++SQ  ++   LDD+     GD   G EP G  DF
Sbjct: 54  IYAAGQRRAPTQSFQAEPVSQVKL-SQSQHLETLNTLDDNQEDNEGD---GVEPAGPTDF 109

Query: 206 RLGLRTLSYKDNY--LEVRNVMGIQIMIQLQCKALVEKFKVNSMIFGLAVTIWLRFVALT 33
                +L+Y D Y  + +R VMG+Q+MIQLQCKALVEKF V+ +I G+   +WLR++A  
Sbjct: 110 GPSQCSLTYTDYYSGVRLRYVMGVQVMIQLQCKALVEKFNVSPLIVGVVGPVWLRYLAHE 169

Query: 32  RVL 24
           +V+
Sbjct: 170 KVM 172



 Score = 47.0 bits (110), Expect(2) = 5e-21
 Identities = 17/22 (77%), Positives = 19/22 (86%)
 Frame = -3

Query: 510 CGNVGFDDGSDGFFYCTRCGSQ 445
           CGN+ F+DG DGFFYCT CGSQ
Sbjct: 12  CGNISFNDGGDGFFYCTLCGSQ 33


>emb|CDP04171.1| unnamed protein product [Coffea canephora]
          Length = 681

 Score = 86.7 bits (213), Expect(2) = 5e-21
 Identities = 58/127 (45%), Positives = 75/127 (59%), Gaps = 4/127 (3%)
 Frame = -1

Query: 386 IYSANHIRRIQPKPESIS--LSQVQSQTRSQFWDSFKALDDHIVKKGGDLEKGFEPTGRR 213
           IYS    RR QP   + +  +SQ + QT+SQ       L D +V    D   G  PTG  
Sbjct: 46  IYSQT-ARRSQPTTAAAAEDISQFK-QTQSQQ----NLLQDLVVDADTDAGDGVGPTGPS 99

Query: 212 DFRLGLRTLSYKDNYLEVRN--VMGIQIMIQLQCKALVEKFKVNSMIFGLAVTIWLRFVA 39
           DF      LSY D Y E+R+  +MG QI+IQLQCKALVEKFKV+ +I GL   IWLR++A
Sbjct: 100 DFGSYPENLSYDDYYSEIRSRYLMGYQILIQLQCKALVEKFKVSPLIIGLVGPIWLRYLA 159

Query: 38  LTRVLMI 18
            TR++ +
Sbjct: 160 FTRIMAV 166



 Score = 42.4 bits (98), Expect(2) = 5e-21
 Identities = 15/24 (62%), Positives = 17/24 (70%)
 Frame = -3

Query: 516 HACGNVGFDDGSDGFFYCTRCGSQ 445
           H CGN  F DG DGF+YC+ C SQ
Sbjct: 4   HVCGNFSFKDGGDGFYYCSICSSQ 27


>ref|XP_009587977.1| PREDICTED: TATA box-binding protein-associated factor RNA
           polymerase I subunit B isoform X1 [Nicotiana
           tomentosiformis] gi|697099794|ref|XP_009587981.1|
           PREDICTED: TATA box-binding protein-associated factor
           RNA polymerase I subunit B isoform X1 [Nicotiana
           tomentosiformis] gi|697099796|ref|XP_009587986.1|
           PREDICTED: TATA box-binding protein-associated factor
           RNA polymerase I subunit B isoform X1 [Nicotiana
           tomentosiformis] gi|697099798|ref|XP_009587993.1|
           PREDICTED: TATA box-binding protein-associated factor
           RNA polymerase I subunit B isoform X1 [Nicotiana
           tomentosiformis] gi|697099800|ref|XP_009587998.1|
           PREDICTED: TATA box-binding protein-associated factor
           RNA polymerase I subunit B isoform X1 [Nicotiana
           tomentosiformis] gi|697099802|ref|XP_009588005.1|
           PREDICTED: TATA box-binding protein-associated factor
           RNA polymerase I subunit B isoform X1 [Nicotiana
           tomentosiformis] gi|697099804|ref|XP_009588014.1|
           PREDICTED: TATA box-binding protein-associated factor
           RNA polymerase I subunit B isoform X1 [Nicotiana
           tomentosiformis] gi|697099806|ref|XP_009588020.1|
           PREDICTED: TATA box-binding protein-associated factor
           RNA polymerase I subunit B isoform X1 [Nicotiana
           tomentosiformis] gi|697099808|ref|XP_009588025.1|
           PREDICTED: TATA box-binding protein-associated factor
           RNA polymerase I subunit B isoform X1 [Nicotiana
           tomentosiformis]
          Length = 702

 Score = 81.6 bits (200), Expect(2) = 7e-21
 Identities = 50/123 (40%), Positives = 74/123 (60%), Gaps = 2/123 (1%)
 Frame = -1

Query: 386 IYSANHIRRIQPKPESISLSQVQSQTRSQFWDSFKALDDHIVKKGGDLEKGFEPTGRRDF 207
           IY+A   R      ++  +SQV+  ++SQ  ++   LDD+     GD   G EP G  DF
Sbjct: 54  IYAAGQRRAPTQICQAEPVSQVKL-SQSQHLETLNTLDDNQEDNEGD---GVEPAGPADF 109

Query: 206 RLGLRTLSYKDNY--LEVRNVMGIQIMIQLQCKALVEKFKVNSMIFGLAVTIWLRFVALT 33
                +L+Y D Y  + +R VMG+Q+MIQLQCKALVEKF V+ +I G+   +WLR++A  
Sbjct: 110 GPSQSSLTYTDYYSGVRLRYVMGLQVMIQLQCKALVEKFNVSPLIVGVVGPVWLRYLAHE 169

Query: 32  RVL 24
           +V+
Sbjct: 170 KVM 172



 Score = 47.0 bits (110), Expect(2) = 7e-21
 Identities = 17/22 (77%), Positives = 19/22 (86%)
 Frame = -3

Query: 510 CGNVGFDDGSDGFFYCTRCGSQ 445
           CGN+ F+DG DGFFYCT CGSQ
Sbjct: 12  CGNISFNDGGDGFFYCTLCGSQ 33


>ref|XP_009588029.1| PREDICTED: TATA box-binding protein-associated factor RNA
           polymerase I subunit B isoform X2 [Nicotiana
           tomentosiformis]
          Length = 701

 Score = 81.6 bits (200), Expect(2) = 7e-21
 Identities = 50/123 (40%), Positives = 74/123 (60%), Gaps = 2/123 (1%)
 Frame = -1

Query: 386 IYSANHIRRIQPKPESISLSQVQSQTRSQFWDSFKALDDHIVKKGGDLEKGFEPTGRRDF 207
           IY+A   R      ++  +SQV+  ++SQ  ++   LDD+     GD   G EP G  DF
Sbjct: 54  IYAAGQRRAPTQICQAEPVSQVKL-SQSQHLETLNTLDDNQEDNEGD---GVEPAGPADF 109

Query: 206 RLGLRTLSYKDNY--LEVRNVMGIQIMIQLQCKALVEKFKVNSMIFGLAVTIWLRFVALT 33
                +L+Y D Y  + +R VMG+Q+MIQLQCKALVEKF V+ +I G+   +WLR++A  
Sbjct: 110 GPSQSSLTYTDYYSGVRLRYVMGLQVMIQLQCKALVEKFNVSPLIVGVVGPVWLRYLAHE 169

Query: 32  RVL 24
           +V+
Sbjct: 170 KVM 172



 Score = 47.0 bits (110), Expect(2) = 7e-21
 Identities = 17/22 (77%), Positives = 19/22 (86%)
 Frame = -3

Query: 510 CGNVGFDDGSDGFFYCTRCGSQ 445
           CGN+ F+DG DGFFYCT CGSQ
Sbjct: 12  CGNISFNDGGDGFFYCTLCGSQ 33


>ref|XP_004251201.1| PREDICTED: TATA box-binding protein-associated factor RNA
           polymerase I subunit B [Solanum lycopersicum]
           gi|723746129|ref|XP_010313464.1| PREDICTED: TATA
           box-binding protein-associated factor RNA polymerase I
           subunit B [Solanum lycopersicum]
           gi|723746132|ref|XP_010313465.1| PREDICTED: TATA
           box-binding protein-associated factor RNA polymerase I
           subunit B [Solanum lycopersicum]
           gi|723746135|ref|XP_010313466.1| PREDICTED: TATA
           box-binding protein-associated factor RNA polymerase I
           subunit B [Solanum lycopersicum]
          Length = 652

 Score = 77.8 bits (190), Expect(2) = 7e-21
 Identities = 51/123 (41%), Positives = 68/123 (55%), Gaps = 2/123 (1%)
 Frame = -1

Query: 386 IYSANHIRRIQPKPESISLSQVQSQTRSQFWDSFKALDDHIVKKGGDLEKGFEPTGRRDF 207
           +YS +  R+     + + +SQVQ    SQ  ++ K  DD+    G D   G  P    DF
Sbjct: 54  MYSTSQRRQYCQVIQPVPISQVQL---SQHLETLKTFDDYDEHNGDD---GVGPAVPSDF 107

Query: 206 RLGLRTLSYKDNYLEVR--NVMGIQIMIQLQCKALVEKFKVNSMIFGLAVTIWLRFVALT 33
                +L+Y D Y E+R   VMG+Q MIQ+QCK LVEKF V+ +I GLA  IWLR +A  
Sbjct: 108 GSSQISLTYTDYYSEIRLRYVMGLQAMIQMQCKTLVEKFNVSPLIVGLAGPIWLRLLAHE 167

Query: 32  RVL 24
            VL
Sbjct: 168 NVL 170



 Score = 50.8 bits (120), Expect(2) = 7e-21
 Identities = 19/22 (86%), Positives = 20/22 (90%)
 Frame = -3

Query: 510 CGNVGFDDGSDGFFYCTRCGSQ 445
           CGN+ FDDG DGFFYCTRCGSQ
Sbjct: 12  CGNLSFDDGGDGFFYCTRCGSQ 33


>gb|KHG20512.1| RNA polymerase I-specific transcription initiation factor rrn7
           [Gossypium arboreum]
          Length = 702

 Score = 74.3 bits (181), Expect(3) = 1e-19
 Identities = 51/125 (40%), Positives = 70/125 (56%), Gaps = 4/125 (3%)
 Frame = -1

Query: 389 AIYSANHIRRIQPKPESISLSQVQSQTRSQFWDSF-KALDDHIVKKGGDLEKGFEPTGRR 213
           A+Y A+H R  +       LSQV  ++  +FW    +    H V + G  + G  P G  
Sbjct: 58  ALYLASHTRHARQPIPVQPLSQVDPKSL-EFWSRLTEEPGGHDVNQDGTRD-GVGPIGTS 115

Query: 212 DF-RLGLRTLSYKDNYLEVRN--VMGIQIMIQLQCKALVEKFKVNSMIFGLAVTIWLRFV 42
           DF    +   SY+  Y EVRN  VMG+Q+MI+ QC+ALVEKF +  +I G+   IWLRF+
Sbjct: 116 DFGSYPMCAYSYEGYYQEVRNRYVMGMQMMIEAQCEALVEKFNMKPLICGIVGPIWLRFL 175

Query: 41  ALTRV 27
           A TRV
Sbjct: 176 ASTRV 180



 Score = 47.0 bits (110), Expect(3) = 1e-19
 Identities = 18/22 (81%), Positives = 19/22 (86%)
 Frame = -3

Query: 510 CGNVGFDDGSDGFFYCTRCGSQ 445
           CGNVG  DGSDG+FYC RCGSQ
Sbjct: 13  CGNVGMADGSDGYFYCLRCGSQ 34



 Score = 23.1 bits (48), Expect(3) = 1e-19
 Identities = 8/9 (88%), Positives = 8/9 (88%)
 Frame = -3

Query: 27  FDDNWADEA 1
           FDD WADEA
Sbjct: 181 FDDGWADEA 189


>ref|XP_008441871.1| PREDICTED: TATA box-binding protein-associated factor RNA
           polymerase I subunit B [Cucumis melo]
           gi|659082499|ref|XP_008441872.1| PREDICTED: TATA
           box-binding protein-associated factor RNA polymerase I
           subunit B [Cucumis melo]
           gi|659082501|ref|XP_008441873.1| PREDICTED: TATA
           box-binding protein-associated factor RNA polymerase I
           subunit B [Cucumis melo]
          Length = 737

 Score = 82.0 bits (201), Expect(2) = 1e-19
 Identities = 56/136 (41%), Positives = 77/136 (56%), Gaps = 16/136 (11%)
 Frame = -1

Query: 386 IYSANHIRRIQP---KPESISLSQ-VQSQTRSQFWDSFKALDDHIVKKGGD------LEK 237
           IYS +H RR  P   K E +S SQ +   ++S+FWDS    +D     G +      L  
Sbjct: 59  IYSQSHTRRRNPTVLKVEPLSQSQPLFGTSQSEFWDSLHLKEDPSGNVGQNDDGIVMLND 118

Query: 236 GFEPTGRRDFRLGLRTLSYKDNYLE------VRNVMGIQIMIQLQCKALVEKFKVNSMIF 75
           G  PTG  DF  G   LS K ++ E      +R VMG+Q++++LQC+ LV++FK   +I 
Sbjct: 119 GVGPTGPEDFGSG-DVLSGKPSFEEYADEVRMRYVMGLQLIMELQCEVLVKEFKATPIIC 177

Query: 74  GLAVTIWLRFVALTRV 27
           GLA +IWLRFV  TRV
Sbjct: 178 GLAASIWLRFVTATRV 193



 Score = 42.4 bits (98), Expect(2) = 1e-19
 Identities = 15/22 (68%), Positives = 18/22 (81%)
 Frame = -3

Query: 510 CGNVGFDDGSDGFFYCTRCGSQ 445
           CG++G  DG DGFFYC +CGSQ
Sbjct: 12  CGSIGLTDGFDGFFYCLQCGSQ 33


>ref|XP_012448211.1| PREDICTED: TATA box-binding protein-associated factor RNA
           polymerase I subunit B isoform X1 [Gossypium raimondii]
           gi|823230992|ref|XP_012448212.1| PREDICTED: TATA
           box-binding protein-associated factor RNA polymerase I
           subunit B isoform X1 [Gossypium raimondii]
           gi|763793769|gb|KJB60765.1| hypothetical protein
           B456_009G324500 [Gossypium raimondii]
           gi|763793771|gb|KJB60767.1| hypothetical protein
           B456_009G324500 [Gossypium raimondii]
          Length = 729

 Score = 73.6 bits (179), Expect(3) = 2e-19
 Identities = 51/125 (40%), Positives = 70/125 (56%), Gaps = 4/125 (3%)
 Frame = -1

Query: 389 AIYSANHIRRIQPKPESISLSQVQSQTRSQFWDSF-KALDDHIVKKGGDLEKGFEPTGRR 213
           A+Y A+H R  +       LSQV  ++  +FW    +    H V + G  + G  PTG  
Sbjct: 58  ALYLASHTRHARQPIPVQPLSQVDPKSL-EFWSRLTEEPGGHNVNQDGTGD-GVGPTGTS 115

Query: 212 DF-RLGLRTLSYKDNYLEVRN--VMGIQIMIQLQCKALVEKFKVNSMIFGLAVTIWLRFV 42
           DF        SY+  Y EVRN  VMG+Q+MI+ QC+ALVEKF +  +I G+   IWLRF+
Sbjct: 116 DFGSYPACAYSYEGYYQEVRNRYVMGMQMMIEAQCEALVEKFNMKPLICGIVGPIWLRFL 175

Query: 41  ALTRV 27
           A T+V
Sbjct: 176 ASTKV 180



 Score = 47.0 bits (110), Expect(3) = 2e-19
 Identities = 18/22 (81%), Positives = 19/22 (86%)
 Frame = -3

Query: 510 CGNVGFDDGSDGFFYCTRCGSQ 445
           CGNVG  DGSDG+FYC RCGSQ
Sbjct: 13  CGNVGMADGSDGYFYCLRCGSQ 34



 Score = 23.1 bits (48), Expect(3) = 2e-19
 Identities = 8/9 (88%), Positives = 8/9 (88%)
 Frame = -3

Query: 27  FDDNWADEA 1
           FDD WADEA
Sbjct: 181 FDDGWADEA 189


>ref|XP_012448213.1| PREDICTED: TATA box-binding protein-associated factor RNA
           polymerase I subunit B isoform X2 [Gossypium raimondii]
          Length = 702

 Score = 73.6 bits (179), Expect(3) = 2e-19
 Identities = 51/125 (40%), Positives = 70/125 (56%), Gaps = 4/125 (3%)
 Frame = -1

Query: 389 AIYSANHIRRIQPKPESISLSQVQSQTRSQFWDSF-KALDDHIVKKGGDLEKGFEPTGRR 213
           A+Y A+H R  +       LSQV  ++  +FW    +    H V + G  + G  PTG  
Sbjct: 58  ALYLASHTRHARQPIPVQPLSQVDPKSL-EFWSRLTEEPGGHNVNQDGTGD-GVGPTGTS 115

Query: 212 DF-RLGLRTLSYKDNYLEVRN--VMGIQIMIQLQCKALVEKFKVNSMIFGLAVTIWLRFV 42
           DF        SY+  Y EVRN  VMG+Q+MI+ QC+ALVEKF +  +I G+   IWLRF+
Sbjct: 116 DFGSYPACAYSYEGYYQEVRNRYVMGMQMMIEAQCEALVEKFNMKPLICGIVGPIWLRFL 175

Query: 41  ALTRV 27
           A T+V
Sbjct: 176 ASTKV 180



 Score = 47.0 bits (110), Expect(3) = 2e-19
 Identities = 18/22 (81%), Positives = 19/22 (86%)
 Frame = -3

Query: 510 CGNVGFDDGSDGFFYCTRCGSQ 445
           CGNVG  DGSDG+FYC RCGSQ
Sbjct: 13  CGNVGMADGSDGYFYCLRCGSQ 34



 Score = 23.1 bits (48), Expect(3) = 2e-19
 Identities = 8/9 (88%), Positives = 8/9 (88%)
 Frame = -3

Query: 27  FDDNWADEA 1
           FDD WADEA
Sbjct: 181 FDDGWADEA 189


>gb|KJB60766.1| hypothetical protein B456_009G324500 [Gossypium raimondii]
          Length = 533

 Score = 73.6 bits (179), Expect(3) = 2e-19
 Identities = 51/125 (40%), Positives = 70/125 (56%), Gaps = 4/125 (3%)
 Frame = -1

Query: 389 AIYSANHIRRIQPKPESISLSQVQSQTRSQFWDSF-KALDDHIVKKGGDLEKGFEPTGRR 213
           A+Y A+H R  +       LSQV  ++  +FW    +    H V + G  + G  PTG  
Sbjct: 58  ALYLASHTRHARQPIPVQPLSQVDPKSL-EFWSRLTEEPGGHNVNQDGTGD-GVGPTGTS 115

Query: 212 DF-RLGLRTLSYKDNYLEVRN--VMGIQIMIQLQCKALVEKFKVNSMIFGLAVTIWLRFV 42
           DF        SY+  Y EVRN  VMG+Q+MI+ QC+ALVEKF +  +I G+   IWLRF+
Sbjct: 116 DFGSYPACAYSYEGYYQEVRNRYVMGMQMMIEAQCEALVEKFNMKPLICGIVGPIWLRFL 175

Query: 41  ALTRV 27
           A T+V
Sbjct: 176 ASTKV 180



 Score = 47.0 bits (110), Expect(3) = 2e-19
 Identities = 18/22 (81%), Positives = 19/22 (86%)
 Frame = -3

Query: 510 CGNVGFDDGSDGFFYCTRCGSQ 445
           CGNVG  DGSDG+FYC RCGSQ
Sbjct: 13  CGNVGMADGSDGYFYCLRCGSQ 34



 Score = 23.1 bits (48), Expect(3) = 2e-19
 Identities = 8/9 (88%), Positives = 8/9 (88%)
 Frame = -3

Query: 27  FDDNWADEA 1
           FDD WADEA
Sbjct: 181 FDDGWADEA 189


>ref|XP_008337501.1| PREDICTED: TATA box-binding protein-associated factor RNA
           polymerase I subunit B [Malus domestica]
          Length = 699

 Score = 84.7 bits (208), Expect(2) = 8e-19
 Identities = 58/131 (44%), Positives = 78/131 (59%), Gaps = 11/131 (8%)
 Frame = -1

Query: 386 IYSANHIRR-----IQPKPESISLSQVQSQTRSQFWDSF---KALDDHIVKKGGDLEKGF 231
           +YS  H+RR     ++P+P S  L  +     S F+++F   K  D + V   G      
Sbjct: 56  LYSNRHVRRGVSSAVKPEPLSQPLDNI-----SPFYNAFSQTKTEDHNAVDAKG------ 104

Query: 230 EPTGRRDFRL-GLRTLSYKDNYLEVR--NVMGIQIMIQLQCKALVEKFKVNSMIFGLAVT 60
            PTG  DF L G+  LS +D Y ++R   VMG+Q +I+LQC+ALV KFKVN MI GL+ T
Sbjct: 105 -PTGPTDFGLDGIIELSVEDYYTQIRLRYVMGLQRLIELQCEALVRKFKVNPMICGLSAT 163

Query: 59  IWLRFVALTRV 27
           IWLRF+A TRV
Sbjct: 164 IWLRFLAGTRV 174



 Score = 37.0 bits (84), Expect(2) = 8e-19
 Identities = 12/22 (54%), Positives = 17/22 (77%)
 Frame = -3

Query: 510 CGNVGFDDGSDGFFYCTRCGSQ 445
           CG VG  +G+DG+FYCT C ++
Sbjct: 10  CGTVGLVEGNDGYFYCTNCSTR 31


>ref|XP_011459262.1| PREDICTED: TATA box-binding protein-associated factor RNA
           polymerase I subunit B isoform X1 [Fragaria vesca subsp.
           vesca] gi|764542837|ref|XP_011459263.1| PREDICTED: TATA
           box-binding protein-associated factor RNA polymerase I
           subunit B isoform X1 [Fragaria vesca subsp. vesca]
           gi|764542840|ref|XP_011459264.1| PREDICTED: TATA
           box-binding protein-associated factor RNA polymerase I
           subunit B isoform X1 [Fragaria vesca subsp. vesca]
           gi|764542848|ref|XP_011459265.1| PREDICTED: TATA
           box-binding protein-associated factor RNA polymerase I
           subunit B isoform X1 [Fragaria vesca subsp. vesca]
           gi|764542853|ref|XP_011459266.1| PREDICTED: TATA
           box-binding protein-associated factor RNA polymerase I
           subunit B isoform X1 [Fragaria vesca subsp. vesca]
           gi|764542858|ref|XP_011459267.1| PREDICTED: TATA
           box-binding protein-associated factor RNA polymerase I
           subunit B isoform X1 [Fragaria vesca subsp. vesca]
          Length = 743

 Score = 73.9 bits (180), Expect(2) = 2e-18
 Identities = 50/123 (40%), Positives = 71/123 (57%), Gaps = 2/123 (1%)
 Frame = -1

Query: 386 IYSANHIRRIQPKPESISLSQVQSQTRSQFWDSFKALDDHIVKKGGDLEKGFEPTGRRDF 207
           +YSA H RR+         S V+++  SQ  D F    +   +     E   +PTG +DF
Sbjct: 58  LYSARHTRRVNS-------SVVKAEPLSQPLDDFSPYYEPFSQSQAKTEDQ-DPTGLKDF 109

Query: 206 RLGLRTLSYKDNY--LEVRNVMGIQIMIQLQCKALVEKFKVNSMIFGLAVTIWLRFVALT 33
               R  + +D Y  + +R VMG+Q MI+LQC+ALV +FKV  +I GLA T+WLRF+A T
Sbjct: 110 AFDGRE-NDEDYYGWIRLRYVMGLQRMIELQCEALVTEFKVTPLICGLAGTVWLRFLAGT 168

Query: 32  RVL 24
           +VL
Sbjct: 169 QVL 171



 Score = 46.6 bits (109), Expect(2) = 2e-18
 Identities = 17/22 (77%), Positives = 19/22 (86%)
 Frame = -3

Query: 510 CGNVGFDDGSDGFFYCTRCGSQ 445
           CGNVG +DG DGFFYCT+C SQ
Sbjct: 12  CGNVGLEDGDDGFFYCTQCNSQ 33