BLASTX nr result

ID: Cornus23_contig00013473 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00013473
         (440 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010660863.1| PREDICTED: golgin subfamily B member 1 isofo...    57   4e-06
ref|XP_010660862.1| PREDICTED: golgin subfamily B member 1 isofo...    57   4e-06
ref|XP_010660861.1| PREDICTED: golgin subfamily B member 1 isofo...    57   4e-06
ref|XP_010660860.1| PREDICTED: golgin subfamily B member 1 isofo...    57   4e-06
emb|CBI34870.3| unnamed protein product [Vitis vinifera]               57   4e-06
ref|XP_002272929.2| PREDICTED: golgin subfamily B member 1 isofo...    57   4e-06
emb|CAN59884.1| hypothetical protein VITISV_026166 [Vitis vinifera]    57   4e-06

>ref|XP_010660863.1| PREDICTED: golgin subfamily B member 1 isoform X5 [Vitis vinifera]
          Length = 4149

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 35/105 (33%), Positives = 60/105 (57%), Gaps = 1/105 (0%)
 Frame = +1

Query: 55   IEAKEHIKNELSSKKINEESDVAKNTHVMSSDEDIVTTSNQEDKLRAEECSGAKTDGKFE 234
            +EA E IKNE+S+++I +E  VA++    S DE+ +  S QED+L               
Sbjct: 3533 VEANEIIKNEISNEEIADEKQVAEDYQPWSLDEETIRKSQQEDEL--------------- 3577

Query: 235  ITKKEISNKE-FDELEKTDVNKNVEEIIVCEDRAVENTYKVSDGD 366
              K E+ ++E + E ++ + N+++E+ I+ E R VE+ + VS GD
Sbjct: 3578 --KNEVEHEELYGESQEGETNEDIEKQIIDEARTVEHPHLVSFGD 3620


>ref|XP_010660862.1| PREDICTED: golgin subfamily B member 1 isoform X4 [Vitis vinifera]
          Length = 4559

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 35/105 (33%), Positives = 60/105 (57%), Gaps = 1/105 (0%)
 Frame = +1

Query: 55   IEAKEHIKNELSSKKINEESDVAKNTHVMSSDEDIVTTSNQEDKLRAEECSGAKTDGKFE 234
            +EA E IKNE+S+++I +E  VA++    S DE+ +  S QED+L               
Sbjct: 3943 VEANEIIKNEISNEEIADEKQVAEDYQPWSLDEETIRKSQQEDEL--------------- 3987

Query: 235  ITKKEISNKE-FDELEKTDVNKNVEEIIVCEDRAVENTYKVSDGD 366
              K E+ ++E + E ++ + N+++E+ I+ E R VE+ + VS GD
Sbjct: 3988 --KNEVEHEELYGESQEGETNEDIEKQIIDEARTVEHPHLVSFGD 4030


>ref|XP_010660861.1| PREDICTED: golgin subfamily B member 1 isoform X2 [Vitis vinifera]
          Length = 4566

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 35/105 (33%), Positives = 60/105 (57%), Gaps = 1/105 (0%)
 Frame = +1

Query: 55   IEAKEHIKNELSSKKINEESDVAKNTHVMSSDEDIVTTSNQEDKLRAEECSGAKTDGKFE 234
            +EA E IKNE+S+++I +E  VA++    S DE+ +  S QED+L               
Sbjct: 3950 VEANEIIKNEISNEEIADEKQVAEDYQPWSLDEETIRKSQQEDEL--------------- 3994

Query: 235  ITKKEISNKE-FDELEKTDVNKNVEEIIVCEDRAVENTYKVSDGD 366
              K E+ ++E + E ++ + N+++E+ I+ E R VE+ + VS GD
Sbjct: 3995 --KNEVEHEELYGESQEGETNEDIEKQIIDEARTVEHPHLVSFGD 4037


>ref|XP_010660860.1| PREDICTED: golgin subfamily B member 1 isoform X1 [Vitis vinifera]
          Length = 4569

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 35/105 (33%), Positives = 60/105 (57%), Gaps = 1/105 (0%)
 Frame = +1

Query: 55   IEAKEHIKNELSSKKINEESDVAKNTHVMSSDEDIVTTSNQEDKLRAEECSGAKTDGKFE 234
            +EA E IKNE+S+++I +E  VA++    S DE+ +  S QED+L               
Sbjct: 3953 VEANEIIKNEISNEEIADEKQVAEDYQPWSLDEETIRKSQQEDEL--------------- 3997

Query: 235  ITKKEISNKE-FDELEKTDVNKNVEEIIVCEDRAVENTYKVSDGD 366
              K E+ ++E + E ++ + N+++E+ I+ E R VE+ + VS GD
Sbjct: 3998 --KNEVEHEELYGESQEGETNEDIEKQIIDEARTVEHPHLVSFGD 4040


>emb|CBI34870.3| unnamed protein product [Vitis vinifera]
          Length = 2966

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 35/105 (33%), Positives = 60/105 (57%), Gaps = 1/105 (0%)
 Frame = +1

Query: 55   IEAKEHIKNELSSKKINEESDVAKNTHVMSSDEDIVTTSNQEDKLRAEECSGAKTDGKFE 234
            +EA E IKNE+S+++I +E  VA++    S DE+ +  S QED+L               
Sbjct: 2055 VEANEIIKNEISNEEIADEKQVAEDYQPWSLDEETIRKSQQEDEL--------------- 2099

Query: 235  ITKKEISNKE-FDELEKTDVNKNVEEIIVCEDRAVENTYKVSDGD 366
              K E+ ++E + E ++ + N+++E+ I+ E R VE+ + VS GD
Sbjct: 2100 --KNEVEHEELYGESQEGETNEDIEKQIIDEARTVEHPHLVSFGD 2142


>ref|XP_002272929.2| PREDICTED: golgin subfamily B member 1 isoform X3 [Vitis vinifera]
          Length = 4565

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 35/105 (33%), Positives = 60/105 (57%), Gaps = 1/105 (0%)
 Frame = +1

Query: 55   IEAKEHIKNELSSKKINEESDVAKNTHVMSSDEDIVTTSNQEDKLRAEECSGAKTDGKFE 234
            +EA E IKNE+S+++I +E  VA++    S DE+ +  S QED+L               
Sbjct: 3949 VEANEIIKNEISNEEIADEKQVAEDYQPWSLDEETIRKSQQEDEL--------------- 3993

Query: 235  ITKKEISNKE-FDELEKTDVNKNVEEIIVCEDRAVENTYKVSDGD 366
              K E+ ++E + E ++ + N+++E+ I+ E R VE+ + VS GD
Sbjct: 3994 --KNEVEHEELYGESQEGETNEDIEKQIIDEARTVEHPHLVSFGD 4036


>emb|CAN59884.1| hypothetical protein VITISV_026166 [Vitis vinifera]
          Length = 6311

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 35/105 (33%), Positives = 59/105 (56%), Gaps = 1/105 (0%)
 Frame = +1

Query: 55   IEAKEHIKNELSSKKINEESDVAKNTHVMSSDEDIVTTSNQEDKLRAEECSGAKTDGKFE 234
            +EA E IKNE+S+++I  E  VA++    S DE+ +  S QED+L               
Sbjct: 5667 VEANEIIKNEISNEEIAXEKQVAEDYQPWSLDEETIRKSQQEDEL--------------- 5711

Query: 235  ITKKEISNKE-FDELEKTDVNKNVEEIIVCEDRAVENTYKVSDGD 366
              K E+ ++E + E ++ + N+++E+ I+ E R VE+ + VS GD
Sbjct: 5712 --KNEVEHEELYGESQEGETNEBIEKQIIDEARTVEHPHLVSFGD 5754


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