BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00012949
         (932 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010648401.1| PREDICTED: endoribonuclease Dicer homolog 3a...   481   e-133
ref|XP_010648400.1| PREDICTED: endoribonuclease Dicer homolog 3a...   481   e-133
emb|CBI20740.3| unnamed protein product [Vitis vinifera]              481   e-133
emb|CAN66439.1| hypothetical protein VITISV_035236 [Vitis vinifera]   466   e-128
ref|XP_010098391.1| Endoribonuclease Dicer-3a-like protein [Moru...   461   e-127
ref|XP_007201640.1| hypothetical protein PRUPE_ppa021659mg [Prun...   460   e-127
ref|XP_008235739.1| PREDICTED: endoribonuclease Dicer homolog 3a...   460   e-127
ref|XP_007012461.1| Ribonuclease III, putative isoform 1 [Theobr...   457   e-126
ref|XP_012450063.1| PREDICTED: endoribonuclease Dicer homolog 3 ...   446   e-123
ref|XP_012450061.1| PREDICTED: endoribonuclease Dicer homolog 3 ...   446   e-123
gb|KJB65398.1| hypothetical protein B456_010G093100 [Gossypium r...   446   e-123
gb|KJB65397.1| hypothetical protein B456_010G093100 [Gossypium r...   446   e-123
ref|XP_012450059.1| PREDICTED: endoribonuclease Dicer homolog 3 ...   441   e-121
gb|KJB65396.1| hypothetical protein B456_010G093100 [Gossypium r...   441   e-121
gb|KJB65395.1| hypothetical protein B456_010G093100 [Gossypium r...   441   e-121
gb|KHG13242.1| Endoribonuclease Dicera [Gossypium arboreum]           441   e-121
ref|XP_011002830.1| PREDICTED: endoribonuclease Dicer homolog 3-...   441   e-121
ref|XP_012450066.1| PREDICTED: endoribonuclease Dicer homolog 3a...   441   e-121
ref|XP_012450064.1| PREDICTED: endoribonuclease Dicer homolog 3 ...   441   e-121
ref|XP_012450062.1| PREDICTED: endoribonuclease Dicer homolog 3 ...   441   e-121

>ref|XP_010648401.1| PREDICTED: endoribonuclease Dicer homolog 3a isoform X2 [Vitis
            vinifera]
          Length = 1680

 Score =  481 bits (1239), Expect = e-133
 Identities = 239/309 (77%), Positives = 271/309 (87%)
 Frame = -3

Query: 927  ELLQIFQSYGGAGQVLSLIFVERIITAKVIERVMKKTAYLSHFTVSYLTGSNSSVDGLAP 748
            ELLQ+FQS+G A +VL LIFVERIITAKVIER +KK  YLSHFTVSYLTGSNSSVD LAP
Sbjct: 401  ELLQLFQSFGVARKVLCLIFVERIITAKVIERFIKKIIYLSHFTVSYLTGSNSSVDALAP 460

Query: 747  KVQKETLESFRSGKVNLLFATDVIEEGIHVPNCTSVIRFDLPKTVRSYVQSRGRARQNDS 568
            K Q+ETLESFRSGKVNLLFATDV+EEGIHVPNC+ VIRFDLPKTVRSYVQSRGRARQ+DS
Sbjct: 461  KAQRETLESFRSGKVNLLFATDVVEEGIHVPNCSCVIRFDLPKTVRSYVQSRGRARQSDS 520

Query: 567  RFVLMLERGNIKQRDQMFDIIRSEYSMTDTALNRDPDAYILKACNIGKTDSYYVDATGAS 388
            +F++MLERGN +QRDQ+FDIIRSEYSMTDTA NRDPD Y LKA  I + DSY+VD+TGAS
Sbjct: 521  QFIIMLERGNTEQRDQLFDIIRSEYSMTDTATNRDPDGYTLKAYTIEEMDSYFVDSTGAS 580

Query: 387  VTADSSVSIVHQYCQKLPGDKYFNPKPSFQFLLSGELYQCKLTLPPNAAFQTIVGPLSGN 208
            VTADSSVS++H+YC+KLPGDKYF PKP F F     +Y+CKLTLPPNAAFQTI+GP + N
Sbjct: 581  VTADSSVSLIHRYCEKLPGDKYFTPKPFFHFTYLEGMYECKLTLPPNAAFQTIIGPGNKN 640

Query: 207  CKSSKKLVCLEACKKLHQMGALDDRLLPYSEKPTENESALKNKESISGAGTTKRKELHGT 28
               SK+LVCLEACKKLHQMGALDD LLPY E+P+EN+  +K+K S +GAGTTKRKELHGT
Sbjct: 641  SHLSKQLVCLEACKKLHQMGALDDHLLPYVEEPSENDIIVKSKGSAAGAGTTKRKELHGT 700

Query: 27   TCTRALSGS 1
            T T ALSG+
Sbjct: 701  TQTCALSGT 709


>ref|XP_010648400.1| PREDICTED: endoribonuclease Dicer homolog 3a isoform X1 [Vitis
            vinifera]
          Length = 1684

 Score =  481 bits (1239), Expect = e-133
 Identities = 239/309 (77%), Positives = 271/309 (87%)
 Frame = -3

Query: 927  ELLQIFQSYGGAGQVLSLIFVERIITAKVIERVMKKTAYLSHFTVSYLTGSNSSVDGLAP 748
            ELLQ+FQS+G A +VL LIFVERIITAKVIER +KK  YLSHFTVSYLTGSNSSVD LAP
Sbjct: 401  ELLQLFQSFGVARKVLCLIFVERIITAKVIERFIKKIIYLSHFTVSYLTGSNSSVDALAP 460

Query: 747  KVQKETLESFRSGKVNLLFATDVIEEGIHVPNCTSVIRFDLPKTVRSYVQSRGRARQNDS 568
            K Q+ETLESFRSGKVNLLFATDV+EEGIHVPNC+ VIRFDLPKTVRSYVQSRGRARQ+DS
Sbjct: 461  KAQRETLESFRSGKVNLLFATDVVEEGIHVPNCSCVIRFDLPKTVRSYVQSRGRARQSDS 520

Query: 567  RFVLMLERGNIKQRDQMFDIIRSEYSMTDTALNRDPDAYILKACNIGKTDSYYVDATGAS 388
            +F++MLERGN +QRDQ+FDIIRSEYSMTDTA NRDPD Y LKA  I + DSY+VD+TGAS
Sbjct: 521  QFIIMLERGNTEQRDQLFDIIRSEYSMTDTATNRDPDGYTLKAYTIEEMDSYFVDSTGAS 580

Query: 387  VTADSSVSIVHQYCQKLPGDKYFNPKPSFQFLLSGELYQCKLTLPPNAAFQTIVGPLSGN 208
            VTADSSVS++H+YC+KLPGDKYF PKP F F     +Y+CKLTLPPNAAFQTI+GP + N
Sbjct: 581  VTADSSVSLIHRYCEKLPGDKYFTPKPFFHFTYLEGMYECKLTLPPNAAFQTIIGPGNKN 640

Query: 207  CKSSKKLVCLEACKKLHQMGALDDRLLPYSEKPTENESALKNKESISGAGTTKRKELHGT 28
               SK+LVCLEACKKLHQMGALDD LLPY E+P+EN+  +K+K S +GAGTTKRKELHGT
Sbjct: 641  SHLSKQLVCLEACKKLHQMGALDDHLLPYVEEPSENDIIVKSKGSAAGAGTTKRKELHGT 700

Query: 27   TCTRALSGS 1
            T T ALSG+
Sbjct: 701  TQTCALSGT 709


>emb|CBI20740.3| unnamed protein product [Vitis vinifera]
          Length = 1688

 Score =  481 bits (1239), Expect = e-133
 Identities = 239/309 (77%), Positives = 271/309 (87%)
 Frame = -3

Query: 927  ELLQIFQSYGGAGQVLSLIFVERIITAKVIERVMKKTAYLSHFTVSYLTGSNSSVDGLAP 748
            ELLQ+FQS+G A +VL LIFVERIITAKVIER +KK  YLSHFTVSYLTGSNSSVD LAP
Sbjct: 409  ELLQLFQSFGVARKVLCLIFVERIITAKVIERFIKKIIYLSHFTVSYLTGSNSSVDALAP 468

Query: 747  KVQKETLESFRSGKVNLLFATDVIEEGIHVPNCTSVIRFDLPKTVRSYVQSRGRARQNDS 568
            K Q+ETLESFRSGKVNLLFATDV+EEGIHVPNC+ VIRFDLPKTVRSYVQSRGRARQ+DS
Sbjct: 469  KAQRETLESFRSGKVNLLFATDVVEEGIHVPNCSCVIRFDLPKTVRSYVQSRGRARQSDS 528

Query: 567  RFVLMLERGNIKQRDQMFDIIRSEYSMTDTALNRDPDAYILKACNIGKTDSYYVDATGAS 388
            +F++MLERGN +QRDQ+FDIIRSEYSMTDTA NRDPD Y LKA  I + DSY+VD+TGAS
Sbjct: 529  QFIIMLERGNTEQRDQLFDIIRSEYSMTDTATNRDPDGYTLKAYTIEEMDSYFVDSTGAS 588

Query: 387  VTADSSVSIVHQYCQKLPGDKYFNPKPSFQFLLSGELYQCKLTLPPNAAFQTIVGPLSGN 208
            VTADSSVS++H+YC+KLPGDKYF PKP F F     +Y+CKLTLPPNAAFQTI+GP + N
Sbjct: 589  VTADSSVSLIHRYCEKLPGDKYFTPKPFFHFTYLEGMYECKLTLPPNAAFQTIIGPGNKN 648

Query: 207  CKSSKKLVCLEACKKLHQMGALDDRLLPYSEKPTENESALKNKESISGAGTTKRKELHGT 28
               SK+LVCLEACKKLHQMGALDD LLPY E+P+EN+  +K+K S +GAGTTKRKELHGT
Sbjct: 649  SHLSKQLVCLEACKKLHQMGALDDHLLPYVEEPSENDIIVKSKGSAAGAGTTKRKELHGT 708

Query: 27   TCTRALSGS 1
            T T ALSG+
Sbjct: 709  TQTCALSGT 717


>emb|CAN66439.1| hypothetical protein VITISV_035236 [Vitis vinifera]
          Length = 2076

 Score =  466 bits (1198), Expect = e-128
 Identities = 231/298 (77%), Positives = 261/298 (87%)
 Frame = -3

Query: 894  AGQVLSLIFVERIITAKVIERVMKKTAYLSHFTVSYLTGSNSSVDGLAPKVQKETLESFR 715
            A +VL LIFVERIITAKVIER +KK  YLSHFTVSYLTGSNSSVD LAPK Q+ETLESFR
Sbjct: 1421 ARKVLCLIFVERIITAKVIERFIKKIIYLSHFTVSYLTGSNSSVDALAPKAQRETLESFR 1480

Query: 714  SGKVNLLFATDVIEEGIHVPNCTSVIRFDLPKTVRSYVQSRGRARQNDSRFVLMLERGNI 535
            SGKVNLLFATDV+EEGIHVPNC+ VIRFDLPKTVRSYVQSRGRARQ+DS+F++MLERGN 
Sbjct: 1481 SGKVNLLFATDVVEEGIHVPNCSCVIRFDLPKTVRSYVQSRGRARQSDSQFIIMLERGNT 1540

Query: 534  KQRDQMFDIIRSEYSMTDTALNRDPDAYILKACNIGKTDSYYVDATGASVTADSSVSIVH 355
            +QRDQ+FDIIRSEYSMTDTA NRDPD Y LKA  I + DSY+VD+TGASVTADSSVS++H
Sbjct: 1541 EQRDQLFDIIRSEYSMTDTATNRDPDGYTLKAYTIEEMDSYFVDSTGASVTADSSVSLIH 1600

Query: 354  QYCQKLPGDKYFNPKPSFQFLLSGELYQCKLTLPPNAAFQTIVGPLSGNCKSSKKLVCLE 175
            +YC+KLPGDKYF PKP F F     +Y+CKLTLPPNAAFQTI+GP + N   SK+LVCLE
Sbjct: 1601 RYCEKLPGDKYFTPKPFFHFTYLEGMYECKLTLPPNAAFQTIIGPGNKNSHLSKQLVCLE 1660

Query: 174  ACKKLHQMGALDDRLLPYSEKPTENESALKNKESISGAGTTKRKELHGTTCTRALSGS 1
            ACKKLHQMGALDD LLPY E+P+EN+  +K+K S +GAGTTKRKELHGTT T ALSG+
Sbjct: 1661 ACKKLHQMGALDDHLLPYVEEPSENDIIVKSKGSAAGAGTTKRKELHGTTQTCALSGT 1718


>ref|XP_010098391.1| Endoribonuclease Dicer-3a-like protein [Morus notabilis]
            gi|587886081|gb|EXB74915.1| Endoribonuclease
            Dicer-3a-like protein [Morus notabilis]
          Length = 1603

 Score =  461 bits (1185), Expect = e-127
 Identities = 225/310 (72%), Positives = 268/310 (86%), Gaps = 1/310 (0%)
 Frame = -3

Query: 927  ELLQIFQSYGGAGQVLSLIFVERIITAKVIERVMKKTAYLSHFTVSYLTGSNSSVDGLAP 748
            EL+++FQS+GGA Q+L L+FV+RIITAKVIER +KK A LSHFTVSYLTGSN+SVD LAP
Sbjct: 382  ELIELFQSFGGAMQLLCLVFVDRIITAKVIERFVKKVACLSHFTVSYLTGSNTSVDALAP 441

Query: 747  KVQKETLESFRSGKVNLLFATDVIEEGIHVPNCTSVIRFDLPKTVRSYVQSRGRARQNDS 568
            K+QKETLESFRSGKVNLLFATDV+EEGIHVPNC+ VIRFDLPKTVRSYVQSRGRARQNDS
Sbjct: 442  KLQKETLESFRSGKVNLLFATDVVEEGIHVPNCSYVIRFDLPKTVRSYVQSRGRARQNDS 501

Query: 567  RFVLMLERGNIKQRDQMFDIIRSEYSMTDTALNRDPDAYILKACNIGKTDSYYVDATGAS 388
            +F++MLERGN KQRDQ++D+IRSE SM DTA NRDP+  +LK C      +Y+VDATGAS
Sbjct: 502  QFIIMLERGNSKQRDQLYDVIRSERSMIDTATNRDPNTCVLKKCTSEVNSAYFVDATGAS 561

Query: 387  VTADSSVSIVHQYCQKLPGDKYFNPKPSFQFL-LSGELYQCKLTLPPNAAFQTIVGPLSG 211
            +TADSSVS++H+YC++LP DKYF PKP+FQF  L    Y+C LTLPPNAAFQT+VGP+S 
Sbjct: 562  ITADSSVSLIHRYCERLPSDKYFTPKPTFQFSNLGDRSYECTLTLPPNAAFQTLVGPVST 621

Query: 210  NCKSSKKLVCLEACKKLHQMGALDDRLLPYSEKPTENESALKNKESISGAGTTKRKELHG 31
            + + SK+LVCLEACKKLHQMGALDD LLP +E+ +E    +K+KE+ SGAGTT+RKELHG
Sbjct: 622  SSQLSKQLVCLEACKKLHQMGALDDHLLPSTEESSERNLNMKSKEAASGAGTTRRKELHG 681

Query: 30   TTCTRALSGS 1
            TTC  ALSG+
Sbjct: 682  TTCILALSGT 691


>ref|XP_007201640.1| hypothetical protein PRUPE_ppa021659mg [Prunus persica]
            gi|462397040|gb|EMJ02839.1| hypothetical protein
            PRUPE_ppa021659mg [Prunus persica]
          Length = 1624

 Score =  460 bits (1184), Expect = e-127
 Identities = 229/309 (74%), Positives = 261/309 (84%)
 Frame = -3

Query: 927  ELLQIFQSYGGAGQVLSLIFVERIITAKVIERVMKKTAYLSHFTVSYLTGSNSSVDGLAP 748
            ELLQIFQS+G   QV  LIFVERIITA VIER +KK   LSHFTVSYLTGSN SV  +AP
Sbjct: 341  ELLQIFQSFGSGSQVPCLIFVERIITANVIERYVKKVPCLSHFTVSYLTGSNKSVGAVAP 400

Query: 747  KVQKETLESFRSGKVNLLFATDVIEEGIHVPNCTSVIRFDLPKTVRSYVQSRGRARQNDS 568
            K+QKETLESFRSGKVNLLFATDV+EEGIHVP+C+ VIRFDLPKTVRSYVQSRGR R +DS
Sbjct: 401  KLQKETLESFRSGKVNLLFATDVVEEGIHVPSCSCVIRFDLPKTVRSYVQSRGRCRTSDS 460

Query: 567  RFVLMLERGNIKQRDQMFDIIRSEYSMTDTALNRDPDAYILKACNIGKTDSYYVDATGAS 388
            +F+LMLERGN KQ DQ+FDIIRSEYSMT+T+ NRDP+  IL+ CN  +T  YYV+ATGAS
Sbjct: 461  QFILMLERGNKKQIDQVFDIIRSEYSMTETSRNRDPEVCILRNCNFEETKVYYVNATGAS 520

Query: 387  VTADSSVSIVHQYCQKLPGDKYFNPKPSFQFLLSGELYQCKLTLPPNAAFQTIVGPLSGN 208
            VTADSSVS++H+YC+KLPGDKYF PKP+F F +S  LYQCK+TLPPNA FQT VGPLS N
Sbjct: 521  VTADSSVSLIHRYCEKLPGDKYFIPKPTFDFEMSEGLYQCKITLPPNAVFQTTVGPLSSN 580

Query: 207  CKSSKKLVCLEACKKLHQMGALDDRLLPYSEKPTENESALKNKESISGAGTTKRKELHGT 28
               SK+LVCLEACK LH+MGALDD LLP  ++P EN+   K+KES +GAGTTKRKELHGT
Sbjct: 581  THLSKQLVCLEACKMLHEMGALDDHLLPLIKEPLENDLITKSKESSAGAGTTKRKELHGT 640

Query: 27   TCTRALSGS 1
            TC RAL G+
Sbjct: 641  TCIRALCGT 649


>ref|XP_008235739.1| PREDICTED: endoribonuclease Dicer homolog 3a-like [Prunus mume]
          Length = 1682

 Score =  460 bits (1183), Expect = e-127
 Identities = 227/309 (73%), Positives = 262/309 (84%)
 Frame = -3

Query: 927  ELLQIFQSYGGAGQVLSLIFVERIITAKVIERVMKKTAYLSHFTVSYLTGSNSSVDGLAP 748
            ELLQIFQS+G   QV  LIFVERIITA VIER +KK   LSHFTVSYLTGSN SV  +AP
Sbjct: 395  ELLQIFQSFGSGSQVPCLIFVERIITANVIERYVKKVPCLSHFTVSYLTGSNKSVGAVAP 454

Query: 747  KVQKETLESFRSGKVNLLFATDVIEEGIHVPNCTSVIRFDLPKTVRSYVQSRGRARQNDS 568
            K+QKETLESFRSGKVNLLFATDV+EEGIHVP+C+ VIRFDLPKTVRSYVQSRGR R +DS
Sbjct: 455  KLQKETLESFRSGKVNLLFATDVVEEGIHVPSCSCVIRFDLPKTVRSYVQSRGRCRTSDS 514

Query: 567  RFVLMLERGNIKQRDQMFDIIRSEYSMTDTALNRDPDAYILKACNIGKTDSYYVDATGAS 388
            +F+LMLERGN KQ DQ+FD+IRSEYSMT+T+ NRDP+  IL+ CN  +T +YYV+ATGAS
Sbjct: 515  QFILMLERGNKKQIDQVFDVIRSEYSMTETSRNRDPEVCILRNCNFEETKAYYVNATGAS 574

Query: 387  VTADSSVSIVHQYCQKLPGDKYFNPKPSFQFLLSGELYQCKLTLPPNAAFQTIVGPLSGN 208
            VTADSSVS++H+YC+KLPGDKYF PKP+F F +S  LYQCK+TLPPNA FQT VGPLS N
Sbjct: 575  VTADSSVSLIHRYCEKLPGDKYFIPKPTFDFEMSEGLYQCKITLPPNAVFQTTVGPLSSN 634

Query: 207  CKSSKKLVCLEACKKLHQMGALDDRLLPYSEKPTENESALKNKESISGAGTTKRKELHGT 28
               SK+LVCLEACK LH+MGALDD LLP  ++P+EN+   K+KES +GAGTTKRKELHGT
Sbjct: 635  THLSKQLVCLEACKMLHEMGALDDHLLPLIKEPSENDLITKSKESSAGAGTTKRKELHGT 694

Query: 27   TCTRALSGS 1
            TC  AL G+
Sbjct: 695  TCIHALCGT 703


>ref|XP_007012461.1| Ribonuclease III, putative isoform 1 [Theobroma cacao]
            gi|508782824|gb|EOY30080.1| Ribonuclease III, putative
            isoform 1 [Theobroma cacao]
          Length = 1639

 Score =  457 bits (1176), Expect = e-126
 Identities = 225/309 (72%), Positives = 266/309 (86%)
 Frame = -3

Query: 927  ELLQIFQSYGGAGQVLSLIFVERIITAKVIERVMKKTAYLSHFTVSYLTGSNSSVDGLAP 748
            ELLQ+FQS+G   +VL LIFVERI+TAKVIER +KK  YLSHFTVSYLTGSN+SVD LAP
Sbjct: 380  ELLQVFQSFGETREVLCLIFVERIVTAKVIERFVKKVTYLSHFTVSYLTGSNTSVDSLAP 439

Query: 747  KVQKETLESFRSGKVNLLFATDVIEEGIHVPNCTSVIRFDLPKTVRSYVQSRGRARQNDS 568
            K+QKETL+SFRSGKVNLLFATDV+EEGIHVPNC+ VIRFDLPKTVRSYVQSRGRAR ++S
Sbjct: 440  KMQKETLDSFRSGKVNLLFATDVVEEGIHVPNCSCVIRFDLPKTVRSYVQSRGRARLSNS 499

Query: 567  RFVLMLERGNIKQRDQMFDIIRSEYSMTDTALNRDPDAYILKACNIGKTDSYYVDATGAS 388
            +F++MLERGN++QR+Q++DIIRSEYS+T TA+NRDPD  +LK   + +T+ Y VDATGAS
Sbjct: 500  QFIMMLERGNVQQRNQLYDIIRSEYSVTTTAINRDPDLCLLKNPTVKETNVYIVDATGAS 559

Query: 387  VTADSSVSIVHQYCQKLPGDKYFNPKPSFQFLLSGELYQCKLTLPPNAAFQTIVGPLSGN 208
            VTADS+VS++ +YC+KLPGDKY+ PKPSF+   SG LY+CKL LP NAA QTIVGPLS N
Sbjct: 560  VTADSAVSLLQRYCEKLPGDKYYVPKPSFKLTFSGGLYECKLLLPVNAALQTIVGPLSRN 619

Query: 207  CKSSKKLVCLEACKKLHQMGALDDRLLPYSEKPTENESALKNKESISGAGTTKRKELHGT 28
               +K+LVCLEACK+LHQMGALDD LLP  E+P++N    K K+S SGAGTTKRKELHGT
Sbjct: 620  SHLAKQLVCLEACKQLHQMGALDDHLLPTIEEPSQNHCVAKGKDSGSGAGTTKRKELHGT 679

Query: 27   TCTRALSGS 1
            TC  ALSGS
Sbjct: 680  TCIHALSGS 688


>ref|XP_012450063.1| PREDICTED: endoribonuclease Dicer homolog 3 isoform X6 [Gossypium
            raimondii]
          Length = 1673

 Score =  446 bits (1148), Expect = e-123
 Identities = 225/311 (72%), Positives = 262/311 (84%), Gaps = 2/311 (0%)
 Frame = -3

Query: 927  ELLQIFQSYGGAGQVLSLIFVERIITAKVIERVMKKTAYLSHFTVSYLTGSNSSVDGLAP 748
            ELLQ+FQS+G   QVL LIFVERIITAKVIER  KK + LSHF VSY+TGSN+SVD LAP
Sbjct: 422  ELLQLFQSFGETRQVLCLIFVERIITAKVIERFAKKVSCLSHFMVSYMTGSNTSVDSLAP 481

Query: 747  KVQKETLESFRSGKVNLLFATDVIEEGIHVPNCTSVIRFDLPKTVRSYVQSRGRARQNDS 568
            K+QKETLESFRSGKVNLLF TDV+EEGIHVPNC  VIRFDLPKTVRSYVQSRGRARQN+S
Sbjct: 482  KMQKETLESFRSGKVNLLFTTDVVEEGIHVPNCCYVIRFDLPKTVRSYVQSRGRARQNNS 541

Query: 567  RFVLMLERGNIKQRDQMFDIIRSEYSMTDTALNRDPDA--YILKACNIGKTDSYYVDATG 394
             F++MLERGN+KQR+Q++DIIRSEYSMT++A+ RDPD+   +LK     +T+ + VDATG
Sbjct: 542  EFIMMLERGNVKQRNQLYDIIRSEYSMTNSAIKRDPDSDPCLLKDHTFEETNVFIVDATG 601

Query: 393  ASVTADSSVSIVHQYCQKLPGDKYFNPKPSFQFLLSGELYQCKLTLPPNAAFQTIVGPLS 214
            ASVTADS+VS++H+YC KLPGDKY+ PKP+FQF  S  LY+CKLTLP NAA QTIVGPLS
Sbjct: 602  ASVTADSAVSLIHKYCGKLPGDKYYTPKPNFQFTSSEGLYKCKLTLPVNAAVQTIVGPLS 661

Query: 213  GNCKSSKKLVCLEACKKLHQMGALDDRLLPYSEKPTENESALKNKESISGAGTTKRKELH 34
             N   +K+LVCLEACK+LHQMGALDD L P  E+P+EN    K K+S +GAGTTKRKELH
Sbjct: 662  RNSHLAKQLVCLEACKQLHQMGALDDHLTPSIEEPSENACISKGKDSGAGAGTTKRKELH 721

Query: 33   GTTCTRALSGS 1
            GTTC +AL GS
Sbjct: 722  GTTCIQALCGS 732


>ref|XP_012450061.1| PREDICTED: endoribonuclease Dicer homolog 3 isoform X4 [Gossypium
            raimondii]
          Length = 1686

 Score =  446 bits (1148), Expect = e-123
 Identities = 225/311 (72%), Positives = 262/311 (84%), Gaps = 2/311 (0%)
 Frame = -3

Query: 927  ELLQIFQSYGGAGQVLSLIFVERIITAKVIERVMKKTAYLSHFTVSYLTGSNSSVDGLAP 748
            ELLQ+FQS+G   QVL LIFVERIITAKVIER  KK + LSHF VSY+TGSN+SVD LAP
Sbjct: 422  ELLQLFQSFGETRQVLCLIFVERIITAKVIERFAKKVSCLSHFMVSYMTGSNTSVDSLAP 481

Query: 747  KVQKETLESFRSGKVNLLFATDVIEEGIHVPNCTSVIRFDLPKTVRSYVQSRGRARQNDS 568
            K+QKETLESFRSGKVNLLF TDV+EEGIHVPNC  VIRFDLPKTVRSYVQSRGRARQN+S
Sbjct: 482  KMQKETLESFRSGKVNLLFTTDVVEEGIHVPNCCYVIRFDLPKTVRSYVQSRGRARQNNS 541

Query: 567  RFVLMLERGNIKQRDQMFDIIRSEYSMTDTALNRDPDA--YILKACNIGKTDSYYVDATG 394
             F++MLERGN+KQR+Q++DIIRSEYSMT++A+ RDPD+   +LK     +T+ + VDATG
Sbjct: 542  EFIMMLERGNVKQRNQLYDIIRSEYSMTNSAIKRDPDSDPCLLKDHTFEETNVFIVDATG 601

Query: 393  ASVTADSSVSIVHQYCQKLPGDKYFNPKPSFQFLLSGELYQCKLTLPPNAAFQTIVGPLS 214
            ASVTADS+VS++H+YC KLPGDKY+ PKP+FQF  S  LY+CKLTLP NAA QTIVGPLS
Sbjct: 602  ASVTADSAVSLIHKYCGKLPGDKYYTPKPNFQFTSSEGLYKCKLTLPVNAAVQTIVGPLS 661

Query: 213  GNCKSSKKLVCLEACKKLHQMGALDDRLLPYSEKPTENESALKNKESISGAGTTKRKELH 34
             N   +K+LVCLEACK+LHQMGALDD L P  E+P+EN    K K+S +GAGTTKRKELH
Sbjct: 662  RNSHLAKQLVCLEACKQLHQMGALDDHLTPSIEEPSENACISKGKDSGAGAGTTKRKELH 721

Query: 33   GTTCTRALSGS 1
            GTTC +AL GS
Sbjct: 722  GTTCIQALCGS 732


>gb|KJB65398.1| hypothetical protein B456_010G093100 [Gossypium raimondii]
          Length = 1657

 Score =  446 bits (1148), Expect = e-123
 Identities = 225/311 (72%), Positives = 262/311 (84%), Gaps = 2/311 (0%)
 Frame = -3

Query: 927  ELLQIFQSYGGAGQVLSLIFVERIITAKVIERVMKKTAYLSHFTVSYLTGSNSSVDGLAP 748
            ELLQ+FQS+G   QVL LIFVERIITAKVIER  KK + LSHF VSY+TGSN+SVD LAP
Sbjct: 406  ELLQLFQSFGETRQVLCLIFVERIITAKVIERFAKKVSCLSHFMVSYMTGSNTSVDSLAP 465

Query: 747  KVQKETLESFRSGKVNLLFATDVIEEGIHVPNCTSVIRFDLPKTVRSYVQSRGRARQNDS 568
            K+QKETLESFRSGKVNLLF TDV+EEGIHVPNC  VIRFDLPKTVRSYVQSRGRARQN+S
Sbjct: 466  KMQKETLESFRSGKVNLLFTTDVVEEGIHVPNCCYVIRFDLPKTVRSYVQSRGRARQNNS 525

Query: 567  RFVLMLERGNIKQRDQMFDIIRSEYSMTDTALNRDPDA--YILKACNIGKTDSYYVDATG 394
             F++MLERGN+KQR+Q++DIIRSEYSMT++A+ RDPD+   +LK     +T+ + VDATG
Sbjct: 526  EFIMMLERGNVKQRNQLYDIIRSEYSMTNSAIKRDPDSDPCLLKDHTFEETNVFIVDATG 585

Query: 393  ASVTADSSVSIVHQYCQKLPGDKYFNPKPSFQFLLSGELYQCKLTLPPNAAFQTIVGPLS 214
            ASVTADS+VS++H+YC KLPGDKY+ PKP+FQF  S  LY+CKLTLP NAA QTIVGPLS
Sbjct: 586  ASVTADSAVSLIHKYCGKLPGDKYYTPKPNFQFTSSEGLYKCKLTLPVNAAVQTIVGPLS 645

Query: 213  GNCKSSKKLVCLEACKKLHQMGALDDRLLPYSEKPTENESALKNKESISGAGTTKRKELH 34
             N   +K+LVCLEACK+LHQMGALDD L P  E+P+EN    K K+S +GAGTTKRKELH
Sbjct: 646  RNSHLAKQLVCLEACKQLHQMGALDDHLTPSIEEPSENACISKGKDSGAGAGTTKRKELH 705

Query: 33   GTTCTRALSGS 1
            GTTC +AL GS
Sbjct: 706  GTTCIQALCGS 716


>gb|KJB65397.1| hypothetical protein B456_010G093100 [Gossypium raimondii]
          Length = 1516

 Score =  446 bits (1148), Expect = e-123
 Identities = 225/311 (72%), Positives = 262/311 (84%), Gaps = 2/311 (0%)
 Frame = -3

Query: 927  ELLQIFQSYGGAGQVLSLIFVERIITAKVIERVMKKTAYLSHFTVSYLTGSNSSVDGLAP 748
            ELLQ+FQS+G   QVL LIFVERIITAKVIER  KK + LSHF VSY+TGSN+SVD LAP
Sbjct: 406  ELLQLFQSFGETRQVLCLIFVERIITAKVIERFAKKVSCLSHFMVSYMTGSNTSVDSLAP 465

Query: 747  KVQKETLESFRSGKVNLLFATDVIEEGIHVPNCTSVIRFDLPKTVRSYVQSRGRARQNDS 568
            K+QKETLESFRSGKVNLLF TDV+EEGIHVPNC  VIRFDLPKTVRSYVQSRGRARQN+S
Sbjct: 466  KMQKETLESFRSGKVNLLFTTDVVEEGIHVPNCCYVIRFDLPKTVRSYVQSRGRARQNNS 525

Query: 567  RFVLMLERGNIKQRDQMFDIIRSEYSMTDTALNRDPDA--YILKACNIGKTDSYYVDATG 394
             F++MLERGN+KQR+Q++DIIRSEYSMT++A+ RDPD+   +LK     +T+ + VDATG
Sbjct: 526  EFIMMLERGNVKQRNQLYDIIRSEYSMTNSAIKRDPDSDPCLLKDHTFEETNVFIVDATG 585

Query: 393  ASVTADSSVSIVHQYCQKLPGDKYFNPKPSFQFLLSGELYQCKLTLPPNAAFQTIVGPLS 214
            ASVTADS+VS++H+YC KLPGDKY+ PKP+FQF  S  LY+CKLTLP NAA QTIVGPLS
Sbjct: 586  ASVTADSAVSLIHKYCGKLPGDKYYTPKPNFQFTSSEGLYKCKLTLPVNAAVQTIVGPLS 645

Query: 213  GNCKSSKKLVCLEACKKLHQMGALDDRLLPYSEKPTENESALKNKESISGAGTTKRKELH 34
             N   +K+LVCLEACK+LHQMGALDD L P  E+P+EN    K K+S +GAGTTKRKELH
Sbjct: 646  RNSHLAKQLVCLEACKQLHQMGALDDHLTPSIEEPSENACISKGKDSGAGAGTTKRKELH 705

Query: 33   GTTCTRALSGS 1
            GTTC +AL GS
Sbjct: 706  GTTCIQALCGS 716


>ref|XP_012450059.1| PREDICTED: endoribonuclease Dicer homolog 3 isoform X2 [Gossypium
            raimondii]
          Length = 1688

 Score =  441 bits (1135), Expect = e-121
 Identities = 225/313 (71%), Positives = 262/313 (83%), Gaps = 4/313 (1%)
 Frame = -3

Query: 927  ELLQIFQSYGGAGQVLSLIFVERIITAKVIERVMKKTAYLSHFTVSYLTGSNSSVDGLAP 748
            ELLQ+FQS+G   QVL LIFVERIITAKVIER  KK + LSHF VSY+TGSN+SVD LAP
Sbjct: 422  ELLQLFQSFGETRQVLCLIFVERIITAKVIERFAKKVSCLSHFMVSYMTGSNTSVDSLAP 481

Query: 747  KVQKETLESFRSGKVNLLFATDVIEEGIHVPNCTSVIRFDLPKTVRSYVQSRGRARQNDS 568
            K+QKETLESFRSGKVNLLF TDV+EEGIHVPNC  VIRFDLPKTVRSYVQSRGRARQN+S
Sbjct: 482  KMQKETLESFRSGKVNLLFTTDVVEEGIHVPNCCYVIRFDLPKTVRSYVQSRGRARQNNS 541

Query: 567  RFVLMLERGNIKQRDQMFDIIRSEYSMTDTALNRDPDA--YILKACNIGKTDSYYVDATG 394
             F++MLERGN+KQR+Q++DIIRSEYSMT++A+ RDPD+   +LK     +T+ + VDATG
Sbjct: 542  EFIMMLERGNVKQRNQLYDIIRSEYSMTNSAIKRDPDSDPCLLKDHTFEETNVFIVDATG 601

Query: 393  ASVTADSSVSIVHQYCQKLPGDKYFNPKPSFQFLLSGELYQCKLTLPPNAAFQTIVGPLS 214
            ASVTADS+VS++H+YC KLPGDKY+ PKP+FQF  S  LY+CKLTLP NAA QTIVGPLS
Sbjct: 602  ASVTADSAVSLIHKYCGKLPGDKYYTPKPNFQFTSSEGLYKCKLTLPVNAAVQTIVGPLS 661

Query: 213  GNCKSSKKLVCLEACKKLHQMGALDDRLLPYSEKPTENESALKNKES--ISGAGTTKRKE 40
             N   +K+LVCLEACK+LHQMGALDD L P  E+P+EN    K K+S   +GAGTTKRKE
Sbjct: 662  RNSHLAKQLVCLEACKQLHQMGALDDHLTPSIEEPSENACISKGKDSGAGAGAGTTKRKE 721

Query: 39   LHGTTCTRALSGS 1
            LHGTTC +AL GS
Sbjct: 722  LHGTTCIQALCGS 734


>gb|KJB65396.1| hypothetical protein B456_010G093100 [Gossypium raimondii]
          Length = 1675

 Score =  441 bits (1135), Expect = e-121
 Identities = 225/313 (71%), Positives = 262/313 (83%), Gaps = 4/313 (1%)
 Frame = -3

Query: 927  ELLQIFQSYGGAGQVLSLIFVERIITAKVIERVMKKTAYLSHFTVSYLTGSNSSVDGLAP 748
            ELLQ+FQS+G   QVL LIFVERIITAKVIER  KK + LSHF VSY+TGSN+SVD LAP
Sbjct: 422  ELLQLFQSFGETRQVLCLIFVERIITAKVIERFAKKVSCLSHFMVSYMTGSNTSVDSLAP 481

Query: 747  KVQKETLESFRSGKVNLLFATDVIEEGIHVPNCTSVIRFDLPKTVRSYVQSRGRARQNDS 568
            K+QKETLESFRSGKVNLLF TDV+EEGIHVPNC  VIRFDLPKTVRSYVQSRGRARQN+S
Sbjct: 482  KMQKETLESFRSGKVNLLFTTDVVEEGIHVPNCCYVIRFDLPKTVRSYVQSRGRARQNNS 541

Query: 567  RFVLMLERGNIKQRDQMFDIIRSEYSMTDTALNRDPDA--YILKACNIGKTDSYYVDATG 394
             F++MLERGN+KQR+Q++DIIRSEYSMT++A+ RDPD+   +LK     +T+ + VDATG
Sbjct: 542  EFIMMLERGNVKQRNQLYDIIRSEYSMTNSAIKRDPDSDPCLLKDHTFEETNVFIVDATG 601

Query: 393  ASVTADSSVSIVHQYCQKLPGDKYFNPKPSFQFLLSGELYQCKLTLPPNAAFQTIVGPLS 214
            ASVTADS+VS++H+YC KLPGDKY+ PKP+FQF  S  LY+CKLTLP NAA QTIVGPLS
Sbjct: 602  ASVTADSAVSLIHKYCGKLPGDKYYTPKPNFQFTSSEGLYKCKLTLPVNAAVQTIVGPLS 661

Query: 213  GNCKSSKKLVCLEACKKLHQMGALDDRLLPYSEKPTENESALKNKES--ISGAGTTKRKE 40
             N   +K+LVCLEACK+LHQMGALDD L P  E+P+EN    K K+S   +GAGTTKRKE
Sbjct: 662  RNSHLAKQLVCLEACKQLHQMGALDDHLTPSIEEPSENACISKGKDSGAGAGAGTTKRKE 721

Query: 39   LHGTTCTRALSGS 1
            LHGTTC +AL GS
Sbjct: 722  LHGTTCIQALCGS 734


>gb|KJB65395.1| hypothetical protein B456_010G093100 [Gossypium raimondii]
          Length = 1659

 Score =  441 bits (1135), Expect = e-121
 Identities = 225/313 (71%), Positives = 262/313 (83%), Gaps = 4/313 (1%)
 Frame = -3

Query: 927  ELLQIFQSYGGAGQVLSLIFVERIITAKVIERVMKKTAYLSHFTVSYLTGSNSSVDGLAP 748
            ELLQ+FQS+G   QVL LIFVERIITAKVIER  KK + LSHF VSY+TGSN+SVD LAP
Sbjct: 406  ELLQLFQSFGETRQVLCLIFVERIITAKVIERFAKKVSCLSHFMVSYMTGSNTSVDSLAP 465

Query: 747  KVQKETLESFRSGKVNLLFATDVIEEGIHVPNCTSVIRFDLPKTVRSYVQSRGRARQNDS 568
            K+QKETLESFRSGKVNLLF TDV+EEGIHVPNC  VIRFDLPKTVRSYVQSRGRARQN+S
Sbjct: 466  KMQKETLESFRSGKVNLLFTTDVVEEGIHVPNCCYVIRFDLPKTVRSYVQSRGRARQNNS 525

Query: 567  RFVLMLERGNIKQRDQMFDIIRSEYSMTDTALNRDPDA--YILKACNIGKTDSYYVDATG 394
             F++MLERGN+KQR+Q++DIIRSEYSMT++A+ RDPD+   +LK     +T+ + VDATG
Sbjct: 526  EFIMMLERGNVKQRNQLYDIIRSEYSMTNSAIKRDPDSDPCLLKDHTFEETNVFIVDATG 585

Query: 393  ASVTADSSVSIVHQYCQKLPGDKYFNPKPSFQFLLSGELYQCKLTLPPNAAFQTIVGPLS 214
            ASVTADS+VS++H+YC KLPGDKY+ PKP+FQF  S  LY+CKLTLP NAA QTIVGPLS
Sbjct: 586  ASVTADSAVSLIHKYCGKLPGDKYYTPKPNFQFTSSEGLYKCKLTLPVNAAVQTIVGPLS 645

Query: 213  GNCKSSKKLVCLEACKKLHQMGALDDRLLPYSEKPTENESALKNKES--ISGAGTTKRKE 40
             N   +K+LVCLEACK+LHQMGALDD L P  E+P+EN    K K+S   +GAGTTKRKE
Sbjct: 646  RNSHLAKQLVCLEACKQLHQMGALDDHLTPSIEEPSENACISKGKDSGAGAGAGTTKRKE 705

Query: 39   LHGTTCTRALSGS 1
            LHGTTC +AL GS
Sbjct: 706  LHGTTCIQALCGS 718


>gb|KHG13242.1| Endoribonuclease Dicera [Gossypium arboreum]
          Length = 1643

 Score =  441 bits (1135), Expect = e-121
 Identities = 222/311 (71%), Positives = 260/311 (83%), Gaps = 2/311 (0%)
 Frame = -3

Query: 927  ELLQIFQSYGGAGQVLSLIFVERIITAKVIERVMKKTAYLSHFTVSYLTGSNSSVDGLAP 748
            ELLQ+FQS+G   QVL LIFVERIITAKVIER  KK + LSHF VSY+TGSN+SVD LAP
Sbjct: 406  ELLQLFQSFGKTRQVLCLIFVERIITAKVIERFAKKVSCLSHFMVSYMTGSNTSVDSLAP 465

Query: 747  KVQKETLESFRSGKVNLLFATDVIEEGIHVPNCTSVIRFDLPKTVRSYVQSRGRARQNDS 568
            K+QKETLESFRSGKVNLLF TDV+EEGIHVPNC  VIRFDLPKTVRSYVQSRGRARQN+S
Sbjct: 466  KIQKETLESFRSGKVNLLFTTDVVEEGIHVPNCCYVIRFDLPKTVRSYVQSRGRARQNNS 525

Query: 567  RFVLMLERGNIKQRDQMFDIIRSEYSMTDTALNRDPDA--YILKACNIGKTDSYYVDATG 394
             F++MLERGN+KQR+Q++DIIRSEYSMT+ A+ RDPD+   +LK     +T+ + VDATG
Sbjct: 526  EFIMMLERGNMKQRNQLYDIIRSEYSMTNLAIKRDPDSDPCLLKDHTFEETNVFIVDATG 585

Query: 393  ASVTADSSVSIVHQYCQKLPGDKYFNPKPSFQFLLSGELYQCKLTLPPNAAFQTIVGPLS 214
            ASVT DS+VS++H+YC KLPGDKY+ PKP+FQF+ S  LY+CKLTLP NAA QTIVGP S
Sbjct: 586  ASVTTDSAVSLIHKYCGKLPGDKYYTPKPNFQFMSSEGLYKCKLTLPVNAAVQTIVGPPS 645

Query: 213  GNCKSSKKLVCLEACKKLHQMGALDDRLLPYSEKPTENESALKNKESISGAGTTKRKELH 34
             N   +K+LVCLEACK+LHQMGALDD L P  E+P+EN    K K+S +GAGTTKRKELH
Sbjct: 646  RNSHLAKQLVCLEACKQLHQMGALDDHLTPSIEEPSENACVSKGKDSGAGAGTTKRKELH 705

Query: 33   GTTCTRALSGS 1
            GT+C +AL GS
Sbjct: 706  GTSCIQALCGS 716


>ref|XP_011002830.1| PREDICTED: endoribonuclease Dicer homolog 3-like isoform X2 [Populus
            euphratica]
          Length = 1669

 Score =  441 bits (1134), Expect = e-121
 Identities = 219/309 (70%), Positives = 261/309 (84%)
 Frame = -3

Query: 927  ELLQIFQSYGGAGQVLSLIFVERIITAKVIERVMKKTAYLSHFTVSYLTGSNSSVDGLAP 748
            ELLQ+F S+G   +VL LIFVERIITAKV+ER +KK   L+HFTVSYLTG+N+S D LAP
Sbjct: 415  ELLQLFLSFGEDREVLCLIFVERIITAKVVERFLKKFEVLAHFTVSYLTGTNASADALAP 474

Query: 747  KVQKETLESFRSGKVNLLFATDVIEEGIHVPNCTSVIRFDLPKTVRSYVQSRGRARQNDS 568
            K+Q ETLESFRSGKVNLLFATDV+EEGIHVPNC+ VIRFDLPKTVRSYVQSRGRARQN+S
Sbjct: 475  KMQMETLESFRSGKVNLLFATDVVEEGIHVPNCSCVIRFDLPKTVRSYVQSRGRARQNNS 534

Query: 567  RFVLMLERGNIKQRDQMFDIIRSEYSMTDTALNRDPDAYILKACNIGKTDSYYVDATGAS 388
            +F+ MLERGN KQRDQ+F+IIRSE+SMTDTA+NRDP+ + LKAC      +Y VD TGAS
Sbjct: 535  QFITMLERGNTKQRDQLFEIIRSEWSMTDTAINRDPNVWNLKACASEAAKAYVVDVTGAS 594

Query: 387  VTADSSVSIVHQYCQKLPGDKYFNPKPSFQFLLSGELYQCKLTLPPNAAFQTIVGPLSGN 208
            VTADSSVS++H+YCQ+LPGD+Y+ PKP+FQF +  +   C + LPPNAAFQT+VGP   N
Sbjct: 595  VTADSSVSLIHRYCQQLPGDRYYTPKPTFQFEVFEQSCHCAMKLPPNAAFQTLVGPTCRN 654

Query: 207  CKSSKKLVCLEACKKLHQMGALDDRLLPYSEKPTENESALKNKESISGAGTTKRKELHGT 28
             + +K+LVCLEACKKLHQMGALDD LLP  E+P+E  + +K+K + +GAGTTKRKELHGT
Sbjct: 655  QQLAKQLVCLEACKKLHQMGALDDHLLPSVEEPSE-IAVVKSKSTSAGAGTTKRKELHGT 713

Query: 27   TCTRALSGS 1
            TC RALSGS
Sbjct: 714  TCIRALSGS 722


>ref|XP_012450066.1| PREDICTED: endoribonuclease Dicer homolog 3a isoform X8 [Gossypium
            raimondii]
          Length = 1348

 Score =  441 bits (1133), Expect = e-121
 Identities = 225/315 (71%), Positives = 262/315 (83%), Gaps = 6/315 (1%)
 Frame = -3

Query: 927  ELLQIFQSYGGAGQVLSLIFVERIITAKVIERVMKKTAYLSHFTVSYLTGSNSSVDGLAP 748
            ELLQ+FQS+G   QVL LIFVERIITAKVIER  KK + LSHF VSY+TGSN+SVD LAP
Sbjct: 422  ELLQLFQSFGETRQVLCLIFVERIITAKVIERFAKKVSCLSHFMVSYMTGSNTSVDSLAP 481

Query: 747  KVQKETLESFRSGKVNLLFATDVIEEGIHVPNCTSVIRFDLPKTVRSYVQSRGRARQNDS 568
            K+QKETLESFRSGKVNLLF TDV+EEGIHVPNC  VIRFDLPKTVRSYVQSRGRARQN+S
Sbjct: 482  KMQKETLESFRSGKVNLLFTTDVVEEGIHVPNCCYVIRFDLPKTVRSYVQSRGRARQNNS 541

Query: 567  RFVLMLERGNIKQRDQMFDIIRSEYSMTDTALNRDPDA--YILKACNIGKTDSYYVDATG 394
             F++MLERGN+KQR+Q++DIIRSEYSMT++A+ RDPD+   +LK     +T+ + VDATG
Sbjct: 542  EFIMMLERGNVKQRNQLYDIIRSEYSMTNSAIKRDPDSDPCLLKDHTFEETNVFIVDATG 601

Query: 393  ASVTADSSVSIVHQYCQKLPGDKYFNPKPSFQFLLSGELYQCKLTLPPNAAFQTIVGPLS 214
            ASVTADS+VS++H+YC KLPGDKY+ PKP+FQF  S  LY+CKLTLP NAA QTIVGPLS
Sbjct: 602  ASVTADSAVSLIHKYCGKLPGDKYYTPKPNFQFTSSEGLYKCKLTLPVNAAVQTIVGPLS 661

Query: 213  GNCKSSKKLVCLEACKKLHQMGALDDRLLPYSEKPTENESALKNKESISGA----GTTKR 46
             N   +K+LVCLEACK+LHQMGALDD L P  E+P+EN    K K+S +GA    GTTKR
Sbjct: 662  RNSHLAKQLVCLEACKQLHQMGALDDHLTPSIEEPSENACISKGKDSGAGAGAGKGTTKR 721

Query: 45   KELHGTTCTRALSGS 1
            KELHGTTC +AL GS
Sbjct: 722  KELHGTTCIQALCGS 736


>ref|XP_012450064.1| PREDICTED: endoribonuclease Dicer homolog 3 isoform X7 [Gossypium
            raimondii]
          Length = 1371

 Score =  441 bits (1133), Expect = e-121
 Identities = 225/315 (71%), Positives = 262/315 (83%), Gaps = 6/315 (1%)
 Frame = -3

Query: 927  ELLQIFQSYGGAGQVLSLIFVERIITAKVIERVMKKTAYLSHFTVSYLTGSNSSVDGLAP 748
            ELLQ+FQS+G   QVL LIFVERIITAKVIER  KK + LSHF VSY+TGSN+SVD LAP
Sbjct: 103  ELLQLFQSFGETRQVLCLIFVERIITAKVIERFAKKVSCLSHFMVSYMTGSNTSVDSLAP 162

Query: 747  KVQKETLESFRSGKVNLLFATDVIEEGIHVPNCTSVIRFDLPKTVRSYVQSRGRARQNDS 568
            K+QKETLESFRSGKVNLLF TDV+EEGIHVPNC  VIRFDLPKTVRSYVQSRGRARQN+S
Sbjct: 163  KMQKETLESFRSGKVNLLFTTDVVEEGIHVPNCCYVIRFDLPKTVRSYVQSRGRARQNNS 222

Query: 567  RFVLMLERGNIKQRDQMFDIIRSEYSMTDTALNRDPDA--YILKACNIGKTDSYYVDATG 394
             F++MLERGN+KQR+Q++DIIRSEYSMT++A+ RDPD+   +LK     +T+ + VDATG
Sbjct: 223  EFIMMLERGNVKQRNQLYDIIRSEYSMTNSAIKRDPDSDPCLLKDHTFEETNVFIVDATG 282

Query: 393  ASVTADSSVSIVHQYCQKLPGDKYFNPKPSFQFLLSGELYQCKLTLPPNAAFQTIVGPLS 214
            ASVTADS+VS++H+YC KLPGDKY+ PKP+FQF  S  LY+CKLTLP NAA QTIVGPLS
Sbjct: 283  ASVTADSAVSLIHKYCGKLPGDKYYTPKPNFQFTSSEGLYKCKLTLPVNAAVQTIVGPLS 342

Query: 213  GNCKSSKKLVCLEACKKLHQMGALDDRLLPYSEKPTENESALKNKESISGA----GTTKR 46
             N   +K+LVCLEACK+LHQMGALDD L P  E+P+EN    K K+S +GA    GTTKR
Sbjct: 343  RNSHLAKQLVCLEACKQLHQMGALDDHLTPSIEEPSENACISKGKDSGAGAGAGKGTTKR 402

Query: 45   KELHGTTCTRALSGS 1
            KELHGTTC +AL GS
Sbjct: 403  KELHGTTCIQALCGS 417


>ref|XP_012450062.1| PREDICTED: endoribonuclease Dicer homolog 3 isoform X5 [Gossypium
            raimondii]
          Length = 1677

 Score =  441 bits (1133), Expect = e-121
 Identities = 225/315 (71%), Positives = 262/315 (83%), Gaps = 6/315 (1%)
 Frame = -3

Query: 927  ELLQIFQSYGGAGQVLSLIFVERIITAKVIERVMKKTAYLSHFTVSYLTGSNSSVDGLAP 748
            ELLQ+FQS+G   QVL LIFVERIITAKVIER  KK + LSHF VSY+TGSN+SVD LAP
Sbjct: 422  ELLQLFQSFGETRQVLCLIFVERIITAKVIERFAKKVSCLSHFMVSYMTGSNTSVDSLAP 481

Query: 747  KVQKETLESFRSGKVNLLFATDVIEEGIHVPNCTSVIRFDLPKTVRSYVQSRGRARQNDS 568
            K+QKETLESFRSGKVNLLF TDV+EEGIHVPNC  VIRFDLPKTVRSYVQSRGRARQN+S
Sbjct: 482  KMQKETLESFRSGKVNLLFTTDVVEEGIHVPNCCYVIRFDLPKTVRSYVQSRGRARQNNS 541

Query: 567  RFVLMLERGNIKQRDQMFDIIRSEYSMTDTALNRDPDA--YILKACNIGKTDSYYVDATG 394
             F++MLERGN+KQR+Q++DIIRSEYSMT++A+ RDPD+   +LK     +T+ + VDATG
Sbjct: 542  EFIMMLERGNVKQRNQLYDIIRSEYSMTNSAIKRDPDSDPCLLKDHTFEETNVFIVDATG 601

Query: 393  ASVTADSSVSIVHQYCQKLPGDKYFNPKPSFQFLLSGELYQCKLTLPPNAAFQTIVGPLS 214
            ASVTADS+VS++H+YC KLPGDKY+ PKP+FQF  S  LY+CKLTLP NAA QTIVGPLS
Sbjct: 602  ASVTADSAVSLIHKYCGKLPGDKYYTPKPNFQFTSSEGLYKCKLTLPVNAAVQTIVGPLS 661

Query: 213  GNCKSSKKLVCLEACKKLHQMGALDDRLLPYSEKPTENESALKNKESISGA----GTTKR 46
             N   +K+LVCLEACK+LHQMGALDD L P  E+P+EN    K K+S +GA    GTTKR
Sbjct: 662  RNSHLAKQLVCLEACKQLHQMGALDDHLTPSIEEPSENACISKGKDSGAGAGAGKGTTKR 721

Query: 45   KELHGTTCTRALSGS 1
            KELHGTTC +AL GS
Sbjct: 722  KELHGTTCIQALCGS 736