BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00012893
         (1651 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010660973.1| PREDICTED: chloroplastic group IIA intron sp...   544   e-152
emb|CBI34982.3| unnamed protein product [Vitis vinifera]              544   e-152
ref|XP_002275511.1| PREDICTED: chloroplastic group IIA intron sp...   544   e-152
ref|XP_011098529.1| PREDICTED: chloroplastic group IIA intron sp...   490   e-135
ref|XP_011047274.1| PREDICTED: chloroplastic group IIA intron sp...   486   e-134
ref|XP_007031356.1| CRM family member 2, putative isoform 2 [The...   474   e-130
ref|XP_007031355.1| CRM family member 2, putative isoform 1 [The...   474   e-130
ref|XP_006482480.1| PREDICTED: chloroplastic group IIA intron sp...   473   e-130
gb|KDO72356.1| hypothetical protein CISIN_1g001441mg [Citrus sin...   473   e-130
ref|XP_006482478.1| PREDICTED: chloroplastic group IIA intron sp...   472   e-130
ref|XP_006482479.1| PREDICTED: chloroplastic group IIA intron sp...   471   e-130
gb|KDO72354.1| hypothetical protein CISIN_1g001441mg [Citrus sin...   471   e-130
gb|KDO72355.1| hypothetical protein CISIN_1g001441mg [Citrus sin...   471   e-129
ref|XP_006482476.1| PREDICTED: chloroplastic group IIA intron sp...   470   e-129
gb|KDO72351.1| hypothetical protein CISIN_1g001441mg [Citrus sin...   469   e-129
gb|KDO72358.1| hypothetical protein CISIN_1g001441mg [Citrus sin...   467   e-128
ref|XP_006482481.1| PREDICTED: chloroplastic group IIA intron sp...   462   e-127
gb|KDO72357.1| hypothetical protein CISIN_1g001441mg [Citrus sin...   461   e-127
ref|XP_010255197.1| PREDICTED: chloroplastic group IIA intron sp...   454   e-124
ref|XP_012849118.1| PREDICTED: chloroplastic group IIA intron sp...   450   e-123

>ref|XP_010660973.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X2 [Vitis vinifera]
          Length = 1044

 Score =  544 bits (1402), Expect = e-152
 Identities = 317/555 (57%), Positives = 370/555 (66%), Gaps = 6/555 (1%)
 Frame = -3

Query: 1649 KRLTGGTLLSRDREYIIFYRGKDFLPAAASLAIEERRKYGIHGEKQMTDCNTSVMAMQEH 1470
            K LTGGTLLSRDRE+I+FYRGKDFLP A S AIE RRKYGIH  KQ  D +   +  +E 
Sbjct: 470  KNLTGGTLLSRDREFIVFYRGKDFLPPAVSSAIEARRKYGIHRGKQKIDHHRLAINAEES 529

Query: 1469 KFETMEGGSEDECDGINDRKRNRLSEGRKPRSTEAAIERTSTKLHTXXXXXXXXXXXXXX 1290
            +  T E  S+ +CDG +D+K N LS+ R  RS EA +ERT+ KL                
Sbjct: 530  ELGTSEHASDKDCDGTDDQKTNSLSKRRMLRSAEAVVERTNIKLSMALEKKERAEKLLAE 589

Query: 1289 XXXXAIHQEPEIDKEGITEEERYMLRRVGLRMKPFLILGRRGVFDGTVENMHLHWKYREL 1110
                 I Q+PEIDKEGITEEERYMLR+VGLRMKPFL+LGRRG+FDGTVENMHLHWKYREL
Sbjct: 590  LEEAQIPQQPEIDKEGITEEERYMLRKVGLRMKPFLLLGRRGIFDGTVENMHLHWKYREL 649

Query: 1109 VKIIFGGRSTEEVYKIARTLEAESGGILVAVERVSKGYAIIMYRGKNYERPACLRPQTLL 930
            VKII  GRS E+++ +ARTLEAESGGILVAVERVSKGYAIIMYRGKNY+RPA LRPQTLL
Sbjct: 650  VKIISNGRSIEDIHGVARTLEAESGGILVAVERVSKGYAIIMYRGKNYKRPASLRPQTLL 709

Query: 929  NKREAMKRSKEAQRRESLKLRVLKLSRNVDELKLQLSSVLTQAKDKETNSMQSAKGSELQ 750
            NKREA+KRS EAQRRESLKL VL+L+RN+DELK QL S   + KDKETNS Q    S L 
Sbjct: 710  NKREALKRSLEAQRRESLKLHVLRLTRNIDELKHQLFS---RIKDKETNSKQLVDKSRLH 766

Query: 749  LVKEQKTNGMQFAENKRSDTELETNCXXXXXSPACSLENVEARERYGAESTFLNSNDGMD 570
            L                                        ARERYGA+   ++S+DGMD
Sbjct: 767  L----------------------------------------ARERYGADVILIHSSDGMD 786

Query: 569  SSIDTPEITQQDILGDFSIEYEGKEEGKFNLTAPEPSSEVVFKE--TNVVMDMNGEGGDV 396
            SS D+ + +  D   DF    +   +       PEPSSE V KE  TNV+ DMN EG   
Sbjct: 787  SSRDSLQTSHNDKRIDFPSMCDSDTDE----ANPEPSSESVLKEIETNVLTDMNEEG--- 839

Query: 395  EPATSPDNF----RTNFTHIVNAEPHFSGNKTLAPSDESQKNESSLSYQRAIENGSNGTP 228
            E  T  ++      T+   IVN E      +T+  S +S KNE     QR ++  SN  P
Sbjct: 840  ECTTCSEDLVSQGETSCYAIVNHE------ETMESSVKSSKNEFKPPVQRPVDTRSNEMP 893

Query: 227  FRAARLSNKDRLLLRKQALKMIKRPVLAIGKSNIVTGVVKTIKAHFQKHPLAIVNIKGRA 48
            FRAA LSN++RLLLRKQAL+M KRPV+A+G+SNIVTGV KTIKAHFQKHPLAIVN+KGRA
Sbjct: 894  FRAAPLSNRERLLLRKQALRMKKRPVIAVGRSNIVTGVAKTIKAHFQKHPLAIVNVKGRA 953

Query: 47   KGTSVQEVVSKLEQA 3
            KGTSVQEV+ KLEQA
Sbjct: 954  KGTSVQEVIFKLEQA 968


>emb|CBI34982.3| unnamed protein product [Vitis vinifera]
          Length = 1028

 Score =  544 bits (1402), Expect = e-152
 Identities = 317/555 (57%), Positives = 370/555 (66%), Gaps = 6/555 (1%)
 Frame = -3

Query: 1649 KRLTGGTLLSRDREYIIFYRGKDFLPAAASLAIEERRKYGIHGEKQMTDCNTSVMAMQEH 1470
            K LTGGTLLSRDRE+I+FYRGKDFLP A S AIE RRKYGIH  KQ  D +   +  +E 
Sbjct: 470  KNLTGGTLLSRDREFIVFYRGKDFLPPAVSSAIEARRKYGIHRGKQKIDHHRLAINAEES 529

Query: 1469 KFETMEGGSEDECDGINDRKRNRLSEGRKPRSTEAAIERTSTKLHTXXXXXXXXXXXXXX 1290
            +  T E  S+ +CDG +D+K N LS+ R  RS EA +ERT+ KL                
Sbjct: 530  ELGTSEHASDKDCDGTDDQKTNSLSKRRMLRSAEAVVERTNIKLSMALEKKERAEKLLAE 589

Query: 1289 XXXXAIHQEPEIDKEGITEEERYMLRRVGLRMKPFLILGRRGVFDGTVENMHLHWKYREL 1110
                 I Q+PEIDKEGITEEERYMLR+VGLRMKPFL+LGRRG+FDGTVENMHLHWKYREL
Sbjct: 590  LEEAQIPQQPEIDKEGITEEERYMLRKVGLRMKPFLLLGRRGIFDGTVENMHLHWKYREL 649

Query: 1109 VKIIFGGRSTEEVYKIARTLEAESGGILVAVERVSKGYAIIMYRGKNYERPACLRPQTLL 930
            VKII  GRS E+++ +ARTLEAESGGILVAVERVSKGYAIIMYRGKNY+RPA LRPQTLL
Sbjct: 650  VKIISNGRSIEDIHGVARTLEAESGGILVAVERVSKGYAIIMYRGKNYKRPASLRPQTLL 709

Query: 929  NKREAMKRSKEAQRRESLKLRVLKLSRNVDELKLQLSSVLTQAKDKETNSMQSAKGSELQ 750
            NKREA+KRS EAQRRESLKL VL+L+RN+DELK QL S   + KDKETNS Q    S L 
Sbjct: 710  NKREALKRSLEAQRRESLKLHVLRLTRNIDELKHQLVS---RIKDKETNSKQLVDKSRLH 766

Query: 749  LVKEQKTNGMQFAENKRSDTELETNCXXXXXSPACSLENVEARERYGAESTFLNSNDGMD 570
            L                                        ARERYGA+   ++S+DGMD
Sbjct: 767  L----------------------------------------ARERYGADVILIHSSDGMD 786

Query: 569  SSIDTPEITQQDILGDFSIEYEGKEEGKFNLTAPEPSSEVVFKE--TNVVMDMNGEGGDV 396
            SS D+ + +  D   DF    +   +       PEPSSE V KE  TNV+ DMN EG   
Sbjct: 787  SSRDSLQTSHNDKRIDFPSMCDSDTDE----ANPEPSSESVLKEIETNVLTDMNEEG--- 839

Query: 395  EPATSPDNF----RTNFTHIVNAEPHFSGNKTLAPSDESQKNESSLSYQRAIENGSNGTP 228
            E  T  ++      T+   IVN E      +T+  S +S KNE     QR ++  SN  P
Sbjct: 840  ECTTCSEDLVSQGETSCYAIVNHE------ETMESSVKSSKNEFKPPVQRPVDTRSNEMP 893

Query: 227  FRAARLSNKDRLLLRKQALKMIKRPVLAIGKSNIVTGVVKTIKAHFQKHPLAIVNIKGRA 48
            FRAA LSN++RLLLRKQAL+M KRPV+A+G+SNIVTGV KTIKAHFQKHPLAIVN+KGRA
Sbjct: 894  FRAAPLSNRERLLLRKQALRMKKRPVIAVGRSNIVTGVAKTIKAHFQKHPLAIVNVKGRA 953

Query: 47   KGTSVQEVVSKLEQA 3
            KGTSVQEV+ KLEQA
Sbjct: 954  KGTSVQEVIFKLEQA 968


>ref|XP_002275511.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X1 [Vitis vinifera]
            gi|731419290|ref|XP_010660972.1| PREDICTED: chloroplastic
            group IIA intron splicing facilitator CRS1, chloroplastic
            isoform X1 [Vitis vinifera]
          Length = 1044

 Score =  544 bits (1402), Expect = e-152
 Identities = 317/555 (57%), Positives = 370/555 (66%), Gaps = 6/555 (1%)
 Frame = -3

Query: 1649 KRLTGGTLLSRDREYIIFYRGKDFLPAAASLAIEERRKYGIHGEKQMTDCNTSVMAMQEH 1470
            K LTGGTLLSRDRE+I+FYRGKDFLP A S AIE RRKYGIH  KQ  D +   +  +E 
Sbjct: 470  KNLTGGTLLSRDREFIVFYRGKDFLPPAVSSAIEARRKYGIHRGKQKIDHHRLAINAEES 529

Query: 1469 KFETMEGGSEDECDGINDRKRNRLSEGRKPRSTEAAIERTSTKLHTXXXXXXXXXXXXXX 1290
            +  T E  S+ +CDG +D+K N LS+ R  RS EA +ERT+ KL                
Sbjct: 530  ELGTSEHASDKDCDGTDDQKTNSLSKRRMLRSAEAVVERTNIKLSMALEKKERAEKLLAE 589

Query: 1289 XXXXAIHQEPEIDKEGITEEERYMLRRVGLRMKPFLILGRRGVFDGTVENMHLHWKYREL 1110
                 I Q+PEIDKEGITEEERYMLR+VGLRMKPFL+LGRRG+FDGTVENMHLHWKYREL
Sbjct: 590  LEEAQIPQQPEIDKEGITEEERYMLRKVGLRMKPFLLLGRRGIFDGTVENMHLHWKYREL 649

Query: 1109 VKIIFGGRSTEEVYKIARTLEAESGGILVAVERVSKGYAIIMYRGKNYERPACLRPQTLL 930
            VKII  GRS E+++ +ARTLEAESGGILVAVERVSKGYAIIMYRGKNY+RPA LRPQTLL
Sbjct: 650  VKIISNGRSIEDIHGVARTLEAESGGILVAVERVSKGYAIIMYRGKNYKRPASLRPQTLL 709

Query: 929  NKREAMKRSKEAQRRESLKLRVLKLSRNVDELKLQLSSVLTQAKDKETNSMQSAKGSELQ 750
            NKREA+KRS EAQRRESLKL VL+L+RN+DELK QL S   + KDKETNS Q    S L 
Sbjct: 710  NKREALKRSLEAQRRESLKLHVLRLTRNIDELKHQLVS---RIKDKETNSKQLVDKSRLH 766

Query: 749  LVKEQKTNGMQFAENKRSDTELETNCXXXXXSPACSLENVEARERYGAESTFLNSNDGMD 570
            L                                        ARERYGA+   ++S+DGMD
Sbjct: 767  L----------------------------------------ARERYGADVILIHSSDGMD 786

Query: 569  SSIDTPEITQQDILGDFSIEYEGKEEGKFNLTAPEPSSEVVFKE--TNVVMDMNGEGGDV 396
            SS D+ + +  D   DF    +   +       PEPSSE V KE  TNV+ DMN EG   
Sbjct: 787  SSRDSLQTSHNDKRIDFPSMCDSDTDE----ANPEPSSESVLKEIETNVLTDMNEEG--- 839

Query: 395  EPATSPDNF----RTNFTHIVNAEPHFSGNKTLAPSDESQKNESSLSYQRAIENGSNGTP 228
            E  T  ++      T+   IVN E      +T+  S +S KNE     QR ++  SN  P
Sbjct: 840  ECTTCSEDLVSQGETSCYAIVNHE------ETMESSVKSSKNEFKPPVQRPVDTRSNEMP 893

Query: 227  FRAARLSNKDRLLLRKQALKMIKRPVLAIGKSNIVTGVVKTIKAHFQKHPLAIVNIKGRA 48
            FRAA LSN++RLLLRKQAL+M KRPV+A+G+SNIVTGV KTIKAHFQKHPLAIVN+KGRA
Sbjct: 894  FRAAPLSNRERLLLRKQALRMKKRPVIAVGRSNIVTGVAKTIKAHFQKHPLAIVNVKGRA 953

Query: 47   KGTSVQEVVSKLEQA 3
            KGTSVQEV+ KLEQA
Sbjct: 954  KGTSVQEVIFKLEQA 968


>ref|XP_011098529.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic [Sesamum indicum]
          Length = 1054

 Score =  490 bits (1261), Expect = e-135
 Identities = 291/550 (52%), Positives = 366/550 (66%), Gaps = 1/550 (0%)
 Frame = -3

Query: 1649 KRLTGGTLLSRDREYIIFYRGKDFLPAAASLAIEERRKYGIHGEKQMTDCNTSVMAMQEH 1470
            K LTGGTLLSRD E+I FYRGKDFLPAA S AIEERRKYGI   K  T  N+ ++  +E 
Sbjct: 456  KWLTGGTLLSRDNEFIAFYRGKDFLPAAVSSAIEERRKYGIDMSKTRTG-NSPILDAKEI 514

Query: 1469 KFETMEGGSEDECDGINDRKRNRLSEGRKPRSTEAAIERTSTKLHTXXXXXXXXXXXXXX 1290
            K  T E  +E E    +D + N+ SE RK + ++AA+ERTSTKL                
Sbjct: 515  KHGTKEYAAEAE----HDEECNQKSEERKLKFSQAAMERTSTKLSMALAKKARAEKLLAE 570

Query: 1289 XXXXAIHQEPEIDKEGITEEERYMLRRVGLRMKPFLILGRRGVFDGTVENMHLHWKYREL 1110
                 + Q PEIDKEGITEEERYMLR+VGLRMKPFL+LGRRGVFDGT+ENMHLHWKYREL
Sbjct: 571  LEKEEMPQPPEIDKEGITEEERYMLRKVGLRMKPFLLLGRRGVFDGTIENMHLHWKYREL 630

Query: 1109 VKIIFGGRSTEEVYKIARTLEAESGGILVAVERVSKGYAIIMYRGKNYERPACLRPQTLL 930
            VK+  G R+ +E+++IARTLEAESGGILVAVERVSKGYAII+YRGKNY RPA LRPQTLL
Sbjct: 631  VKVCIGRRNIKEIHEIARTLEAESGGILVAVERVSKGYAIIVYRGKNYTRPASLRPQTLL 690

Query: 929  NKREAMKRSKEAQRRESLKLRVLKLSRNVDELKLQLSSVLTQAKDKETNSMQSAKGSELQ 750
            +KREAM+RS EAQRRESLKL VLKLSRN+DE+KLQ+      AK+ + N MQ  K  EL 
Sbjct: 691  SKREAMRRSLEAQRRESLKLHVLKLSRNIDEMKLQM------AKEGDPNDMQLTKDLELG 744

Query: 749  LVKEQKTNGMQFAENKRSDTELETNCXXXXXSPACSLENVEARERYGAESTFLNSNDGMD 570
             V +QK +   + ++K    + E+            L N EAR+  G + T  +  D M 
Sbjct: 745  FV-DQKNSKNHYNKDKALHQDPESAHQSYFG----ELAN-EARDSPGTDDTSKDPEDLMH 798

Query: 569  SSIDTPEITQQDILGDFSIEYEGKEEGKFNLTAPEPSSEVVFKETNVVMDMNGEGGDVEP 390
            ++ D+ +I QQD  G  S+    K    F  T  E     + +ET  ++ +N + G +E 
Sbjct: 799  TAKDSEDIVQQDSSGYVSLHSAVKGNYLFETTEEELQPRSLPQETKGLLSINEQSGHIEL 858

Query: 389  ATS-PDNFRTNFTHIVNAEPHFSGNKTLAPSDESQKNESSLSYQRAIENGSNGTPFRAAR 213
            ++S     RT+ +     + H  G  +     ++ + E S+  ++A+   +   PFRA +
Sbjct: 859  SSSLRFQDRTSSSTTTCIQSHTGGRDSSTGGFQNVELEPSV--KKALSEATAAMPFRALQ 916

Query: 212  LSNKDRLLLRKQALKMIKRPVLAIGKSNIVTGVVKTIKAHFQKHPLAIVNIKGRAKGTSV 33
            LSN++RLLLRKQALKM K PVLA+GKSN+VTGV K IKAHF+KHPLAIVNIKGRAKGTSV
Sbjct: 917  LSNRERLLLRKQALKMKKLPVLAVGKSNVVTGVAKAIKAHFEKHPLAIVNIKGRAKGTSV 976

Query: 32   QEVVSKLEQA 3
            +EV+  LEQA
Sbjct: 977  REVIYNLEQA 986


>ref|XP_011047274.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic [Populus euphratica]
          Length = 1026

 Score =  486 bits (1252), Expect = e-134
 Identities = 289/553 (52%), Positives = 360/553 (65%), Gaps = 4/553 (0%)
 Frame = -3

Query: 1649 KRLTGGTLLSRDREYIIFYRGKDFLPAAASLAIEERRKYGIHGEKQMTDCNTSVMAMQEH 1470
            K LTGGTLLSRDRE+I+ YRGKDFLP+A S AIE+RRK G   +K+ TDC TS    +E 
Sbjct: 442  KWLTGGTLLSRDREFIVLYRGKDFLPSAVSSAIEDRRKRG-DMDKRWTDCITSNETSEEL 500

Query: 1469 K---FETMEGGSEDECDGINDRKRNRLSEGRKPRSTEAAIERTSTKLHTXXXXXXXXXXX 1299
            K   + T    S DE DG NDRK + LSE +  RST+AAI+RTS KL             
Sbjct: 501  KDRSWRTTNAKSTDEIDGTNDRKHD-LSENKNLRSTDAAIKRTSIKLSMALEKKAKAEKL 559

Query: 1298 XXXXXXXAIHQEPEIDKEGITEEERYMLRRVGLRMKPFLILGRRGVFDGTVENMHLHWKY 1119
                    + Q+PEIDKEGITEEERYMLR++GL+MKPFL++GRRGVFDGT+ENMHLHWKY
Sbjct: 560  LSELEKSEMSQQPEIDKEGITEEERYMLRKIGLKMKPFLLMGRRGVFDGTIENMHLHWKY 619

Query: 1118 RELVKIIFGGRSTEEVYKIARTLEAESGGILVAVERVSKGYAIIMYRGKNYERPACLRPQ 939
            RELVKII   +S + V  +ARTLEAESGGILVAVE VSKGYAII+YRGKNY RPACLRP 
Sbjct: 620  RELVKIICKEKSFQAVQAVARTLEAESGGILVAVEGVSKGYAIILYRGKNYTRPACLRPP 679

Query: 938  TLLNKREAMKRSKEAQRRESLKLRVLKLSRNVDELKLQLSSVLTQAKDKETNSMQSAKGS 759
            TLL+KR+AMKRS EAQRRESLKL VL+L+ N+D LKLQL       KDKE  ++Q    S
Sbjct: 680  TLLSKRQAMKRSLEAQRRESLKLHVLRLTSNIDHLKLQL------VKDKEAYNVQCFDES 733

Query: 758  ELQLVKEQKTNGMQFAENKRSDTELETNCXXXXXSPACSLENVEARERYGAESTFLNSND 579
            + Q+  E +       E  R+D+EL+ +C      PA     +E R+ +GA+ST +N ND
Sbjct: 734  KFQVKGESE-------EPARTDSELKPDCHSYSTIPADCNVIIETRDEHGADSTTVNQND 786

Query: 578  GMDSSIDTPEITQQDILGDFSIEYEGKEEGKFNLTAPEPSSEVVFKETNVVMDMNGEGGD 399
             + +S +  ++                          +P+    + +     D N   G+
Sbjct: 787  SLGASANHKQL--------------------------QPAQRSNWTDRYPTFDGN-RTGE 819

Query: 398  VEPATSPD-NFRTNFTHIVNAEPHFSGNKTLAPSDESQKNESSLSYQRAIENGSNGTPFR 222
             EP + P+ +   N +H+ NA+   S N+ +  S +S +N+S  S    +E   N  P  
Sbjct: 820  NEPNSLPEFSNEKNVSHL-NAKNCVSFNEEMGSSVKSAENQSGESVPIVVEE-DNRKPSS 877

Query: 221  AARLSNKDRLLLRKQALKMIKRPVLAIGKSNIVTGVVKTIKAHFQKHPLAIVNIKGRAKG 42
               LSN+DRLLLRKQALKM  RPVLA+G+SNIVTGV KTIKAHFQ+HP AIVN+KGRAKG
Sbjct: 878  VVCLSNRDRLLLRKQALKMKNRPVLAVGRSNIVTGVAKTIKAHFQRHPFAIVNVKGRAKG 937

Query: 41   TSVQEVVSKLEQA 3
            TSVQEVVSKLE+A
Sbjct: 938  TSVQEVVSKLEEA 950


>ref|XP_007031356.1| CRM family member 2, putative isoform 2 [Theobroma cacao]
            gi|508710385|gb|EOY02282.1| CRM family member 2, putative
            isoform 2 [Theobroma cacao]
          Length = 1045

 Score =  474 bits (1220), Expect = e-130
 Identities = 289/553 (52%), Positives = 363/553 (65%), Gaps = 4/553 (0%)
 Frame = -3

Query: 1649 KRLTGGTLLSRDREYIIFYRGKDFLPAAASLAIEERRKYGIHGEKQMTDCNTSVMAMQEH 1470
            K LTGGTLLSRD+++I+ YRGKDFLP+A S AIEERR++ IH EKQ  +C+ S    QE 
Sbjct: 450  KWLTGGTLLSRDKDFIVLYRGKDFLPSAVSSAIEERRRHVIHVEKQGAECSKSKKTAQEV 509

Query: 1469 KFETMEGGSEDECDGINDRKRNRLSEGRKPRSTEAAIERTSTKLHTXXXXXXXXXXXXXX 1290
              E  + GSE + +   D++ N   + +  +S EAAI +T  KL                
Sbjct: 510  IVEDTKSGSESKINSAKDQRSNFFGDPKNMKSAEAAIRKTDVKLSMALEKKAKAEKLLAE 569

Query: 1289 XXXXAIHQEPEIDKEGITEEERYMLRRVGLRMKPFLILGRRGVFDGTVENMHLHWKYREL 1110
                 I Q+ EIDKEGIT+EERYMLR+VGLRMKPFL+LGRRGVFDGTVENMHLHWKYREL
Sbjct: 570  LEQAEIPQQSEIDKEGITQEERYMLRKVGLRMKPFLLLGRRGVFDGTVENMHLHWKYREL 629

Query: 1109 VKIIFGGRSTEEVYKIARTLEAESGGILVAVERVSKGYAIIMYRGKNYERPACLRPQTLL 930
            VKII    + E V+++AR LEAESGGILVAVERVSKGYAII+YRGKNYERP  LRPQTLL
Sbjct: 630  VKIISKETNVEAVHQLARMLEAESGGILVAVERVSKGYAIIVYRGKNYERPTSLRPQTLL 689

Query: 929  NKREAMKRSKEAQRRESLKLRVLKLSRNVDELKLQLSSVLTQAKDKETNSMQSAKGSELQ 750
             KR+AMKRS E QRR+SLKL +L L+RNV++L+ QL        DKE NSMQ+ + S L 
Sbjct: 690  TKRQAMKRSLEEQRRKSLKLHILNLTRNVNDLEHQL------VVDKEANSMQTVEQSSLP 743

Query: 749  LVKEQKTNGMQFAENKRSDTELETNCXXXXXSPACSLENVEARERYGAESTFLNSNDGMD 570
            LV+E+    +Q  E   S  E           PA S  +VE+R++ G+EST +  ND M 
Sbjct: 744  LVQEE-LETLQSVEYTGSVIE----------CPASSGGHVESRDKDGSESTSM-KNDKMV 791

Query: 569  SSIDTPEITQQDILGDFSIEYEGKEEGKFNLTAPEPSSEVVFKETNVVMDMNGEGGDVE- 393
            ++I   + ++Q+ +   SI ++G E  K   T  E S+E V ++++   ++      VE 
Sbjct: 792  ATISIRQPSKQEFMEPSSI-HDGFENHK---TESEFSAESVNRKSHAT-ELRALHTQVEM 846

Query: 392  -PATSPDNFRTNF--THIVNAEPHFSGNKTLAPSDESQKNESSLSYQRAIENGSNGTPFR 222
               + PDN       +  +NAE   S N  +    ES  +   +S   A+EN SN     
Sbjct: 847  VDTSYPDNLMEEIDDSGAINAEHGVSNNGPMESLVES-ASMLDVSISSAVENVSNKMAST 905

Query: 221  AARLSNKDRLLLRKQALKMIKRPVLAIGKSNIVTGVVKTIKAHFQKHPLAIVNIKGRAKG 42
            A  LSNKDRLLLRKQALKM KRPVLA+G+SNIVTGV K I+AHFQKHPLAIVN+KGRAKG
Sbjct: 906  ANFLSNKDRLLLRKQALKMKKRPVLAVGRSNIVTGVAKAIRAHFQKHPLAIVNVKGRAKG 965

Query: 41   TSVQEVVSKLEQA 3
            TSVQEVV KL++A
Sbjct: 966  TSVQEVVLKLQEA 978


>ref|XP_007031355.1| CRM family member 2, putative isoform 1 [Theobroma cacao]
            gi|508710384|gb|EOY02281.1| CRM family member 2, putative
            isoform 1 [Theobroma cacao]
          Length = 1087

 Score =  474 bits (1220), Expect = e-130
 Identities = 289/553 (52%), Positives = 363/553 (65%), Gaps = 4/553 (0%)
 Frame = -3

Query: 1649 KRLTGGTLLSRDREYIIFYRGKDFLPAAASLAIEERRKYGIHGEKQMTDCNTSVMAMQEH 1470
            K LTGGTLLSRD+++I+ YRGKDFLP+A S AIEERR++ IH EKQ  +C+ S    QE 
Sbjct: 492  KWLTGGTLLSRDKDFIVLYRGKDFLPSAVSSAIEERRRHVIHVEKQGAECSKSKKTAQEV 551

Query: 1469 KFETMEGGSEDECDGINDRKRNRLSEGRKPRSTEAAIERTSTKLHTXXXXXXXXXXXXXX 1290
              E  + GSE + +   D++ N   + +  +S EAAI +T  KL                
Sbjct: 552  IVEDTKSGSESKINSAKDQRSNFFGDPKNMKSAEAAIRKTDVKLSMALEKKAKAEKLLAE 611

Query: 1289 XXXXAIHQEPEIDKEGITEEERYMLRRVGLRMKPFLILGRRGVFDGTVENMHLHWKYREL 1110
                 I Q+ EIDKEGIT+EERYMLR+VGLRMKPFL+LGRRGVFDGTVENMHLHWKYREL
Sbjct: 612  LEQAEIPQQSEIDKEGITQEERYMLRKVGLRMKPFLLLGRRGVFDGTVENMHLHWKYREL 671

Query: 1109 VKIIFGGRSTEEVYKIARTLEAESGGILVAVERVSKGYAIIMYRGKNYERPACLRPQTLL 930
            VKII    + E V+++AR LEAESGGILVAVERVSKGYAII+YRGKNYERP  LRPQTLL
Sbjct: 672  VKIISKETNVEAVHQLARMLEAESGGILVAVERVSKGYAIIVYRGKNYERPTSLRPQTLL 731

Query: 929  NKREAMKRSKEAQRRESLKLRVLKLSRNVDELKLQLSSVLTQAKDKETNSMQSAKGSELQ 750
             KR+AMKRS E QRR+SLKL +L L+RNV++L+ QL        DKE NSMQ+ + S L 
Sbjct: 732  TKRQAMKRSLEEQRRKSLKLHILNLTRNVNDLEHQL------VVDKEANSMQTVEQSSLP 785

Query: 749  LVKEQKTNGMQFAENKRSDTELETNCXXXXXSPACSLENVEARERYGAESTFLNSNDGMD 570
            LV+E+    +Q  E   S  E           PA S  +VE+R++ G+EST +  ND M 
Sbjct: 786  LVQEE-LETLQSVEYTGSVIE----------CPASSGGHVESRDKDGSESTSM-KNDKMV 833

Query: 569  SSIDTPEITQQDILGDFSIEYEGKEEGKFNLTAPEPSSEVVFKETNVVMDMNGEGGDVE- 393
            ++I   + ++Q+ +   SI ++G E  K   T  E S+E V ++++   ++      VE 
Sbjct: 834  ATISIRQPSKQEFMEPSSI-HDGFENHK---TESEFSAESVNRKSHAT-ELRALHTQVEM 888

Query: 392  -PATSPDNFRTNF--THIVNAEPHFSGNKTLAPSDESQKNESSLSYQRAIENGSNGTPFR 222
               + PDN       +  +NAE   S N  +    ES  +   +S   A+EN SN     
Sbjct: 889  VDTSYPDNLMEEIDDSGAINAEHGVSNNGPMESLVES-ASMLDVSISSAVENVSNKMAST 947

Query: 221  AARLSNKDRLLLRKQALKMIKRPVLAIGKSNIVTGVVKTIKAHFQKHPLAIVNIKGRAKG 42
            A  LSNKDRLLLRKQALKM KRPVLA+G+SNIVTGV K I+AHFQKHPLAIVN+KGRAKG
Sbjct: 948  ANFLSNKDRLLLRKQALKMKKRPVLAVGRSNIVTGVAKAIRAHFQKHPLAIVNVKGRAKG 1007

Query: 41   TSVQEVVSKLEQA 3
            TSVQEVV KL++A
Sbjct: 1008 TSVQEVVLKLQEA 1020


>ref|XP_006482480.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X5 [Citrus sinensis]
          Length = 1045

 Score =  473 bits (1218), Expect = e-130
 Identities = 292/553 (52%), Positives = 357/553 (64%), Gaps = 4/553 (0%)
 Frame = -3

Query: 1649 KRLTGGTLLSRDREYIIFYRGKDFLPAAASLAIEERRKYGIHGEKQMTDCNTSVMAMQE- 1473
            KRLTGGTLLSRDRE+I+FYRGKDFLP AAS AIEERRK+         + +TS  + +E 
Sbjct: 464  KRLTGGTLLSRDREFIVFYRGKDFLPPAASCAIEERRKH---------EFSTSNDSKEEP 514

Query: 1472 ---HKFETMEGGSEDECDGINDRKRNRLSEGRKPRSTEAAIERTSTKLHTXXXXXXXXXX 1302
               ++ +     ++DE    ND+K    SE ++ RS E AI RT+ +L +          
Sbjct: 515  ELGNRHDNSGDNTQDEFGCTNDQKSTMHSEQKERRSAEVAIRRTNIRL-SRALEKKAEAE 573

Query: 1301 XXXXXXXXAIHQEPEIDKEGITEEERYMLRRVGLRMKPFLILGRRGVFDGTVENMHLHWK 1122
                       ++ E+DKEGITEEERYMLR+VGLRMK FL++GRRGVFDGTVENMHLHWK
Sbjct: 574  KLLAELEEETPEQYEVDKEGITEEERYMLRKVGLRMKAFLLMGRRGVFDGTVENMHLHWK 633

Query: 1121 YRELVKIIFGGRSTEEVYKIARTLEAESGGILVAVERVSKGYAIIMYRGKNYERPACLRP 942
            +RELVKII   R  E   + ARTLE ESGGILVAVERV+KGYAII+YRGKNYERPACLRP
Sbjct: 634  HRELVKIISKQRKIEAALQEARTLEVESGGILVAVERVNKGYAIILYRGKNYERPACLRP 693

Query: 941  QTLLNKREAMKRSKEAQRRESLKLRVLKLSRNVDELKLQLSSVLTQAKDKETNSMQSAKG 762
            +TLL KREAMKRS EAQRR+SLKL VL+L+RN+++LKLQL       KDKE NS+++   
Sbjct: 694  KTLLTKREAMKRSLEAQRRQSLKLHVLELTRNIEKLKLQL------VKDKEANSLETIDE 747

Query: 761  SELQLVKEQKTNGMQFAENKRSDTELETNCXXXXXSPACSLENVEARERYGAESTFLNSN 582
            S L LVKE+    MQ AE  RSDT  E               NV+AR   GA+ T   SN
Sbjct: 748  SILPLVKEE-IGDMQPAECMRSDTSHEV--------------NVQARGECGADLTSTESN 792

Query: 581  DGMDSSIDTPEITQQDILGDFSIEYEGKEEGKFNLTAPEPSSEVVFKETNVVMDMNGEGG 402
            D  D++ID P   QQD   + S+ + G   G    + P+ S + V  E N ++D      
Sbjct: 793  DTGDATIDGPPAIQQDKQTE-SLTHNGVASG--TSSCPDNSMQEVM-EYNTIVDAEQCSS 848

Query: 401  DVEPATSPDNFRTNFTHIVNAEPHFSGNKTLAPSDESQKNESSLSYQRAIENGSNGTPFR 222
            D EP  S          I +A+   S N+ +  S E  K  S LS      N  N    R
Sbjct: 849  DNEPRES---------SIESAKSRSSENEPIEQSFELAKGRSGLSTPIGTGNVWNENNSR 899

Query: 221  AARLSNKDRLLLRKQALKMIKRPVLAIGKSNIVTGVVKTIKAHFQKHPLAIVNIKGRAKG 42
            A +LSN+DRLLLRKQAL+M KRPVLA+G+SNIVTGV K IKAHF+K+PLAIVN+KGRAKG
Sbjct: 900  AIQLSNRDRLLLRKQALRMKKRPVLAVGRSNIVTGVAKAIKAHFEKYPLAIVNVKGRAKG 959

Query: 41   TSVQEVVSKLEQA 3
            TSVQEVV+KLE+A
Sbjct: 960  TSVQEVVAKLEEA 972


>gb|KDO72356.1| hypothetical protein CISIN_1g001441mg [Citrus sinensis]
          Length = 1045

 Score =  473 bits (1216), Expect = e-130
 Identities = 293/553 (52%), Positives = 355/553 (64%), Gaps = 4/553 (0%)
 Frame = -3

Query: 1649 KRLTGGTLLSRDREYIIFYRGKDFLPAAASLAIEERRKYGIHGEKQMTDCNTSVMAMQE- 1473
            KRLTGGTLLSRDRE+I+FYRGKDFLP AAS AIEERRK+         + +TS  + +E 
Sbjct: 464  KRLTGGTLLSRDREFIVFYRGKDFLPPAASSAIEERRKH---------EFSTSNDSKEEP 514

Query: 1472 ---HKFETMEGGSEDECDGINDRKRNRLSEGRKPRSTEAAIERTSTKLHTXXXXXXXXXX 1302
               ++ +     ++DE    ND+K    SE ++ RS E AI RT+ +L            
Sbjct: 515  ELGNRHDNSGDNTQDEFGCTNDQKSTMHSEQKERRSAEVAIRRTNIRLSRVLEKKAEAEK 574

Query: 1301 XXXXXXXXAIHQEPEIDKEGITEEERYMLRRVGLRMKPFLILGRRGVFDGTVENMHLHWK 1122
                       Q  E+DKEGITEEERYMLR+VGLRMK FL++GRRGVFDGTVENMHLHWK
Sbjct: 575  LLAELEEERPEQY-EVDKEGITEEERYMLRKVGLRMKAFLLMGRRGVFDGTVENMHLHWK 633

Query: 1121 YRELVKIIFGGRSTEEVYKIARTLEAESGGILVAVERVSKGYAIIMYRGKNYERPACLRP 942
            +RELVKII   R  E   + ARTLE ESGGILVAVERV+KGYAII+YRGKNYERPACLRP
Sbjct: 634  HRELVKIISKQRKIEAALQEARTLEVESGGILVAVERVNKGYAIILYRGKNYERPACLRP 693

Query: 941  QTLLNKREAMKRSKEAQRRESLKLRVLKLSRNVDELKLQLSSVLTQAKDKETNSMQSAKG 762
            +TLL KREAMKRS EAQRR+SLKL VL+L+RN+++LKLQL       KDKE NS+++   
Sbjct: 694  KTLLTKREAMKRSLEAQRRQSLKLHVLELTRNIEKLKLQL------VKDKEANSLETIDE 747

Query: 761  SELQLVKEQKTNGMQFAENKRSDTELETNCXXXXXSPACSLENVEARERYGAESTFLNSN 582
            S L LVKE+    MQ AE  RSDT  E               NV+AR   GA+ T   SN
Sbjct: 748  SILPLVKEE-IGDMQPAECMRSDTSHEV--------------NVQARGECGADLTSTESN 792

Query: 581  DGMDSSIDTPEITQQDILGDFSIEYEGKEEGKFNLTAPEPSSEVVFKETNVVMDMNGEGG 402
            D  D++ID P   QQD   + S+ + G   G    + P+ S + V  E N ++D      
Sbjct: 793  DTGDATIDGPPAIQQDKQTE-SLTHNGVASG--TSSCPDNSMQEVM-EYNTIVDAEQCSS 848

Query: 401  DVEPATSPDNFRTNFTHIVNAEPHFSGNKTLAPSDESQKNESSLSYQRAIENGSNGTPFR 222
            D EP  S          I +A+   S N+ +  S E  K  S LS      N  N    R
Sbjct: 849  DNEPRES---------SIESAKSRSSENEPIEQSFELAKGRSGLSTPIGTGNVWNENNSR 899

Query: 221  AARLSNKDRLLLRKQALKMIKRPVLAIGKSNIVTGVVKTIKAHFQKHPLAIVNIKGRAKG 42
            A +LSN+DRLLLRKQAL+M KRPVLA+G+SNIVTGV K IKAHF+K+PLAIVN+KGRAKG
Sbjct: 900  AIQLSNRDRLLLRKQALRMKKRPVLAVGRSNIVTGVAKAIKAHFEKYPLAIVNVKGRAKG 959

Query: 41   TSVQEVVSKLEQA 3
            TSVQEVV+KLE+A
Sbjct: 960  TSVQEVVAKLEEA 972


>ref|XP_006482478.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X3 [Citrus sinensis]
          Length = 1062

 Score =  472 bits (1214), Expect = e-130
 Identities = 292/563 (51%), Positives = 363/563 (64%), Gaps = 14/563 (2%)
 Frame = -3

Query: 1649 KRLTGGTLLSRDREYIIFYRGKDFLPAAASLAIEERRKYGIHGEKQMTDCNTSVMAMQE- 1473
            KRLTGGTLLSRDRE+I+FYRGKDFLP AAS AIEERRK+         + +TS  + +E 
Sbjct: 464  KRLTGGTLLSRDREFIVFYRGKDFLPPAASCAIEERRKH---------EFSTSNDSKEEP 514

Query: 1472 ---HKFETMEGGSEDECDGINDRKRNRLSEGRKPRSTEAAIERTSTKLHTXXXXXXXXXX 1302
               ++ +     ++DE    ND+K    SE ++ RS E AI RT+ +L +          
Sbjct: 515  ELGNRHDNSGDNTQDEFGCTNDQKSTMHSEQKERRSAEVAIRRTNIRL-SRALEKKAEAE 573

Query: 1301 XXXXXXXXAIHQEPEIDKEGITEEERYMLRRVGLRMKPFLILGRRGVFDGTVENMHLHWK 1122
                       ++ E+DKEGITEEERYMLR+VGLRMK FL++GRRGVFDGTVENMHLHWK
Sbjct: 574  KLLAELEEETPEQYEVDKEGITEEERYMLRKVGLRMKAFLLMGRRGVFDGTVENMHLHWK 633

Query: 1121 YRELVKIIFGGRSTEEVYKIARTLEAESGGILVAVERVSKGYAIIMYRGKNYERPACLRP 942
            +RELVKII   R  E   + ARTLE ESGGILVAVERV+KGYAII+YRGKNYERPACLRP
Sbjct: 634  HRELVKIISKQRKIEAALQEARTLEVESGGILVAVERVNKGYAIILYRGKNYERPACLRP 693

Query: 941  QTLLNKREAMKRSKEAQRRESLKLRVLKLSRNVDELKLQLSSVLTQAKDKETNSMQSAKG 762
            +TLL KREAMKRS EAQRR+SLKL VL+L+RN+++LKLQL       KDKE NS+++   
Sbjct: 694  KTLLTKREAMKRSLEAQRRQSLKLHVLELTRNIEKLKLQL------VKDKEANSLETIDE 747

Query: 761  SELQLVKEQKTNGMQFAENKRSDTELETNCXXXXXSPACSLENVEARERYGAESTFLNSN 582
            S L LVKE+    MQ AE  RSDT  E               NV+AR   GA+ T   SN
Sbjct: 748  SILPLVKEE-IGDMQPAECMRSDTSHEV--------------NVQARGECGADLTSTESN 792

Query: 581  DGMDSSIDTPEITQQDILGDFSIEYEG----KEEGKFNLTAPEPSSEVVFKETNVVMDMN 414
            D  D++ID P   QQD   + S+ + G    + E K +L +    S++     N++ D  
Sbjct: 793  DTGDATIDGPPAIQQDKQTE-SLTHNGISINEIESKSSLKSVSKESQL-----NMIADFF 846

Query: 413  GEGGDVEPATSPDNFRTNF------THIVNAEPHFSGNKTLAPSDESQKNESSLSYQRAI 252
             EG     ++ PDN   +       + I +A+   S N+ +  S E  K  S LS     
Sbjct: 847  AEGVASGTSSCPDNSMCSSDNEPRESSIESAKSRSSENEPIEQSFELAKGRSGLSTPIGT 906

Query: 251  ENGSNGTPFRAARLSNKDRLLLRKQALKMIKRPVLAIGKSNIVTGVVKTIKAHFQKHPLA 72
             N  N    RA +LSN+DRLLLRKQAL+M KRPVLA+G+SNIVTGV K IKAHF+K+PLA
Sbjct: 907  GNVWNENNSRAIQLSNRDRLLLRKQALRMKKRPVLAVGRSNIVTGVAKAIKAHFEKYPLA 966

Query: 71   IVNIKGRAKGTSVQEVVSKLEQA 3
            IVN+KGRAKGTSVQEVV+KLE+A
Sbjct: 967  IVNVKGRAKGTSVQEVVAKLEEA 989


>ref|XP_006482479.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X4 [Citrus sinensis]
          Length = 1050

 Score =  471 bits (1213), Expect = e-130
 Identities = 292/555 (52%), Positives = 357/555 (64%), Gaps = 6/555 (1%)
 Frame = -3

Query: 1649 KRLTGGTLLSRDREYIIFYRGKDFLPAAASLAIEERRKYGIHGEKQMTDCNTSVMAMQE- 1473
            KRLTGGTLLSRDRE+I+FYRGKDFLP AAS AIEERRK+         + +TS  + +E 
Sbjct: 464  KRLTGGTLLSRDREFIVFYRGKDFLPPAASCAIEERRKH---------EFSTSNDSKEEP 514

Query: 1472 ---HKFETMEGGSEDECDGINDRKRNRLSEGRKPRSTEAAIERTSTKLHTXXXXXXXXXX 1302
               ++ +     ++DE    ND+K    SE ++ RS E AI RT+ +L +          
Sbjct: 515  ELGNRHDNSGDNTQDEFGCTNDQKSTMHSEQKERRSAEVAIRRTNIRL-SRALEKKAEAE 573

Query: 1301 XXXXXXXXAIHQEPEIDKEGITEEERYMLRRVGLRMKPFLILGRRGVFDGTVENMHLHWK 1122
                       ++ E+DKEGITEEERYMLR+VGLRMK FL++GRRGVFDGTVENMHLHWK
Sbjct: 574  KLLAELEEETPEQYEVDKEGITEEERYMLRKVGLRMKAFLLMGRRGVFDGTVENMHLHWK 633

Query: 1121 YRELVKIIFGGRSTEEVYKIARTLEAESGGILVAVERVSKGYAIIMYRGKNYERPACLRP 942
            +RELVKII   R  E   + ARTLE ESGGILVAVERV+KGYAII+YRGKNYERPACLRP
Sbjct: 634  HRELVKIISKQRKIEAALQEARTLEVESGGILVAVERVNKGYAIILYRGKNYERPACLRP 693

Query: 941  QTLLNKREAMKRSKEAQRRESLKLRVLKLSRNVDELKLQLSSVLTQAKDKETNSMQSAKG 762
            +TLL KREAMKRS EAQRR+SLKL VL+L+RN+++LKLQL       KDKE NS+++   
Sbjct: 694  KTLLTKREAMKRSLEAQRRQSLKLHVLELTRNIEKLKLQL------VKDKEANSLETIDE 747

Query: 761  SELQLVKEQKTNGMQFAENKRSDTELETNCXXXXXSPACSLENVEARERYGAESTFLNSN 582
            S L LVKE+    MQ AE  RSDT  E               NV+AR   GA+ T   SN
Sbjct: 748  SILPLVKEE-IGDMQPAECMRSDTSHEV--------------NVQARGECGADLTSTESN 792

Query: 581  DGMDSSIDTPEITQQDILGDFSIEYEGKEEGKFNLTA--PEPSSEVVFKETNVVMDMNGE 408
            D  D++ID P   QQD   +     +   EG  + T+  P+ S + V  E N ++D    
Sbjct: 793  DTGDATIDGPPAIQQDKQTESLTHNDFFAEGVASGTSSCPDNSMQEVM-EYNTIVDAEQC 851

Query: 407  GGDVEPATSPDNFRTNFTHIVNAEPHFSGNKTLAPSDESQKNESSLSYQRAIENGSNGTP 228
              D EP  S          I +A+   S N+ +  S E  K  S LS      N  N   
Sbjct: 852  SSDNEPRES---------SIESAKSRSSENEPIEQSFELAKGRSGLSTPIGTGNVWNENN 902

Query: 227  FRAARLSNKDRLLLRKQALKMIKRPVLAIGKSNIVTGVVKTIKAHFQKHPLAIVNIKGRA 48
             RA +LSN+DRLLLRKQAL+M KRPVLA+G+SNIVTGV K IKAHF+K+PLAIVN+KGRA
Sbjct: 903  SRAIQLSNRDRLLLRKQALRMKKRPVLAVGRSNIVTGVAKAIKAHFEKYPLAIVNVKGRA 962

Query: 47   KGTSVQEVVSKLEQA 3
            KGTSVQEVV+KLE+A
Sbjct: 963  KGTSVQEVVAKLEEA 977


>gb|KDO72354.1| hypothetical protein CISIN_1g001441mg [Citrus sinensis]
          Length = 1062

 Score =  471 bits (1212), Expect = e-130
 Identities = 293/563 (52%), Positives = 361/563 (64%), Gaps = 14/563 (2%)
 Frame = -3

Query: 1649 KRLTGGTLLSRDREYIIFYRGKDFLPAAASLAIEERRKYGIHGEKQMTDCNTSVMAMQE- 1473
            KRLTGGTLLSRDRE+I+FYRGKDFLP AAS AIEERRK+         + +TS  + +E 
Sbjct: 464  KRLTGGTLLSRDREFIVFYRGKDFLPPAASSAIEERRKH---------EFSTSNDSKEEP 514

Query: 1472 ---HKFETMEGGSEDECDGINDRKRNRLSEGRKPRSTEAAIERTSTKLHTXXXXXXXXXX 1302
               ++ +     ++DE    ND+K    SE ++ RS E AI RT+ +L            
Sbjct: 515  ELGNRHDNSGDNTQDEFGCTNDQKSTMHSEQKERRSAEVAIRRTNIRLSRVLEKKAEAEK 574

Query: 1301 XXXXXXXXAIHQEPEIDKEGITEEERYMLRRVGLRMKPFLILGRRGVFDGTVENMHLHWK 1122
                       Q  E+DKEGITEEERYMLR+VGLRMK FL++GRRGVFDGTVENMHLHWK
Sbjct: 575  LLAELEEERPEQY-EVDKEGITEEERYMLRKVGLRMKAFLLMGRRGVFDGTVENMHLHWK 633

Query: 1121 YRELVKIIFGGRSTEEVYKIARTLEAESGGILVAVERVSKGYAIIMYRGKNYERPACLRP 942
            +RELVKII   R  E   + ARTLE ESGGILVAVERV+KGYAII+YRGKNYERPACLRP
Sbjct: 634  HRELVKIISKQRKIEAALQEARTLEVESGGILVAVERVNKGYAIILYRGKNYERPACLRP 693

Query: 941  QTLLNKREAMKRSKEAQRRESLKLRVLKLSRNVDELKLQLSSVLTQAKDKETNSMQSAKG 762
            +TLL KREAMKRS EAQRR+SLKL VL+L+RN+++LKLQL       KDKE NS+++   
Sbjct: 694  KTLLTKREAMKRSLEAQRRQSLKLHVLELTRNIEKLKLQL------VKDKEANSLETIDE 747

Query: 761  SELQLVKEQKTNGMQFAENKRSDTELETNCXXXXXSPACSLENVEARERYGAESTFLNSN 582
            S L LVKE+    MQ AE  RSDT  E               NV+AR   GA+ T   SN
Sbjct: 748  SILPLVKEE-IGDMQPAECMRSDTSHEV--------------NVQARGECGADLTSTESN 792

Query: 581  DGMDSSIDTPEITQQDILGDFSIEYEG----KEEGKFNLTAPEPSSEVVFKETNVVMDMN 414
            D  D++ID P   QQD   + S+ + G    + E K +L +    S++     N++ D  
Sbjct: 793  DTGDATIDGPPAIQQDKQTE-SLTHNGISINEIESKSSLKSVSKESQL-----NMIADFF 846

Query: 413  GEGGDVEPATSPDNFRTNF------THIVNAEPHFSGNKTLAPSDESQKNESSLSYQRAI 252
             EG     ++ PDN   +       + I +A+   S N+ +  S E  K  S LS     
Sbjct: 847  AEGVASGTSSCPDNSMCSSDNEPRESSIESAKSRSSENEPIEQSFELAKGRSGLSTPIGT 906

Query: 251  ENGSNGTPFRAARLSNKDRLLLRKQALKMIKRPVLAIGKSNIVTGVVKTIKAHFQKHPLA 72
             N  N    RA +LSN+DRLLLRKQAL+M KRPVLA+G+SNIVTGV K IKAHF+K+PLA
Sbjct: 907  GNVWNENNSRAIQLSNRDRLLLRKQALRMKKRPVLAVGRSNIVTGVAKAIKAHFEKYPLA 966

Query: 71   IVNIKGRAKGTSVQEVVSKLEQA 3
            IVN+KGRAKGTSVQEVV+KLE+A
Sbjct: 967  IVNVKGRAKGTSVQEVVAKLEEA 989


>gb|KDO72355.1| hypothetical protein CISIN_1g001441mg [Citrus sinensis]
          Length = 1050

 Score =  471 bits (1211), Expect = e-129
 Identities = 293/555 (52%), Positives = 355/555 (63%), Gaps = 6/555 (1%)
 Frame = -3

Query: 1649 KRLTGGTLLSRDREYIIFYRGKDFLPAAASLAIEERRKYGIHGEKQMTDCNTSVMAMQE- 1473
            KRLTGGTLLSRDRE+I+FYRGKDFLP AAS AIEERRK+         + +TS  + +E 
Sbjct: 464  KRLTGGTLLSRDREFIVFYRGKDFLPPAASSAIEERRKH---------EFSTSNDSKEEP 514

Query: 1472 ---HKFETMEGGSEDECDGINDRKRNRLSEGRKPRSTEAAIERTSTKLHTXXXXXXXXXX 1302
               ++ +     ++DE    ND+K    SE ++ RS E AI RT+ +L            
Sbjct: 515  ELGNRHDNSGDNTQDEFGCTNDQKSTMHSEQKERRSAEVAIRRTNIRLSRVLEKKAEAEK 574

Query: 1301 XXXXXXXXAIHQEPEIDKEGITEEERYMLRRVGLRMKPFLILGRRGVFDGTVENMHLHWK 1122
                       Q  E+DKEGITEEERYMLR+VGLRMK FL++GRRGVFDGTVENMHLHWK
Sbjct: 575  LLAELEEERPEQY-EVDKEGITEEERYMLRKVGLRMKAFLLMGRRGVFDGTVENMHLHWK 633

Query: 1121 YRELVKIIFGGRSTEEVYKIARTLEAESGGILVAVERVSKGYAIIMYRGKNYERPACLRP 942
            +RELVKII   R  E   + ARTLE ESGGILVAVERV+KGYAII+YRGKNYERPACLRP
Sbjct: 634  HRELVKIISKQRKIEAALQEARTLEVESGGILVAVERVNKGYAIILYRGKNYERPACLRP 693

Query: 941  QTLLNKREAMKRSKEAQRRESLKLRVLKLSRNVDELKLQLSSVLTQAKDKETNSMQSAKG 762
            +TLL KREAMKRS EAQRR+SLKL VL+L+RN+++LKLQL       KDKE NS+++   
Sbjct: 694  KTLLTKREAMKRSLEAQRRQSLKLHVLELTRNIEKLKLQL------VKDKEANSLETIDE 747

Query: 761  SELQLVKEQKTNGMQFAENKRSDTELETNCXXXXXSPACSLENVEARERYGAESTFLNSN 582
            S L LVKE+    MQ AE  RSDT  E               NV+AR   GA+ T   SN
Sbjct: 748  SILPLVKEE-IGDMQPAECMRSDTSHEV--------------NVQARGECGADLTSTESN 792

Query: 581  DGMDSSIDTPEITQQDILGDFSIEYEGKEEGKFNLTA--PEPSSEVVFKETNVVMDMNGE 408
            D  D++ID P   QQD   +     +   EG  + T+  P+ S + V  E N ++D    
Sbjct: 793  DTGDATIDGPPAIQQDKQTESLTHNDFFAEGVASGTSSCPDNSMQEVM-EYNTIVDAEQC 851

Query: 407  GGDVEPATSPDNFRTNFTHIVNAEPHFSGNKTLAPSDESQKNESSLSYQRAIENGSNGTP 228
              D EP  S          I +A+   S N+ +  S E  K  S LS      N  N   
Sbjct: 852  SSDNEPRES---------SIESAKSRSSENEPIEQSFELAKGRSGLSTPIGTGNVWNENN 902

Query: 227  FRAARLSNKDRLLLRKQALKMIKRPVLAIGKSNIVTGVVKTIKAHFQKHPLAIVNIKGRA 48
             RA +LSN+DRLLLRKQAL+M KRPVLA+G+SNIVTGV K IKAHF+K+PLAIVN+KGRA
Sbjct: 903  SRAIQLSNRDRLLLRKQALRMKKRPVLAVGRSNIVTGVAKAIKAHFEKYPLAIVNVKGRA 962

Query: 47   KGTSVQEVVSKLEQA 3
            KGTSVQEVV+KLE+A
Sbjct: 963  KGTSVQEVVAKLEEA 977


>ref|XP_006482476.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X1 [Citrus sinensis]
            gi|568857850|ref|XP_006482477.1| PREDICTED: chloroplastic
            group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X2 [Citrus sinensis]
          Length = 1076

 Score =  470 bits (1209), Expect = e-129
 Identities = 296/577 (51%), Positives = 367/577 (63%), Gaps = 28/577 (4%)
 Frame = -3

Query: 1649 KRLTGGTLLSRDREYIIFYRGKDFLPAAASLAIEERRKYGIHGEKQMTDCNTSVMAMQE- 1473
            KRLTGGTLLSRDRE+I+FYRGKDFLP AAS AIEERRK+         + +TS  + +E 
Sbjct: 464  KRLTGGTLLSRDREFIVFYRGKDFLPPAASCAIEERRKH---------EFSTSNDSKEEP 514

Query: 1472 ---HKFETMEGGSEDECDGINDRKRNRLSEGRKPRSTEAAIERTSTKLHTXXXXXXXXXX 1302
               ++ +     ++DE    ND+K    SE ++ RS E AI RT+ +L +          
Sbjct: 515  ELGNRHDNSGDNTQDEFGCTNDQKSTMHSEQKERRSAEVAIRRTNIRL-SRALEKKAEAE 573

Query: 1301 XXXXXXXXAIHQEPEIDKEGITEEERYMLRRVGLRMKPFLILGRRGVFDGTVENMHLHWK 1122
                       ++ E+DKEGITEEERYMLR+VGLRMK FL++GRRGVFDGTVENMHLHWK
Sbjct: 574  KLLAELEEETPEQYEVDKEGITEEERYMLRKVGLRMKAFLLMGRRGVFDGTVENMHLHWK 633

Query: 1121 YRELVKIIFGGRSTEEVYKIARTLEAESGGILVAVERVSKGYAIIMYRGKNYERPACLRP 942
            +RELVKII   R  E   + ARTLE ESGGILVAVERV+KGYAII+YRGKNYERPACLRP
Sbjct: 634  HRELVKIISKQRKIEAALQEARTLEVESGGILVAVERVNKGYAIILYRGKNYERPACLRP 693

Query: 941  QTLLNKREAMKRSKEAQRRESLKLRVLKLSRNVDELKLQLSSVLTQAKDKETNSMQSAKG 762
            +TLL KREAMKRS EAQRR+SLKL VL+L+RN+++LKLQL       KDKE NS+++   
Sbjct: 694  KTLLTKREAMKRSLEAQRRQSLKLHVLELTRNIEKLKLQL------VKDKEANSLETIDE 747

Query: 761  SELQLVKEQKTNGMQFAENKRSDTELETNCXXXXXSPACSLENVEARERYGAESTFLNSN 582
            S L LVKE+    MQ AE  RSDT  E               NV+AR   GA+ T   SN
Sbjct: 748  SILPLVKEE-IGDMQPAECMRSDTSHEV--------------NVQARGECGADLTSTESN 792

Query: 581  DGMDSSIDTPEITQQDILGDFSIEYEG----KEEGKFNLTAPEPSSEVVFKETNVVMDMN 414
            D  D++ID P   QQD   + S+ + G    + E K +L +    S++     N++ D  
Sbjct: 793  DTGDATIDGPPAIQQDKQTE-SLTHNGISINEIESKSSLKSVSKESQL-----NMIADFF 846

Query: 413  GEGGDVEPATSPDNFR---TNFTHIVNAEPHFSGNKTLAPSDESQKNESS------LSYQ 261
             EG     ++ PDN       +  IV+AE   S N+    S ES K+ SS       S++
Sbjct: 847  AEGVASGTSSCPDNSMQEVMEYNTIVDAEQCSSDNEPRESSIESAKSRSSENEPIEQSFE 906

Query: 260  RAIENGSNGTPF-----------RAARLSNKDRLLLRKQALKMIKRPVLAIGKSNIVTGV 114
             A       TP            RA +LSN+DRLLLRKQAL+M KRPVLA+G+SNIVTGV
Sbjct: 907  LAKGRSGLSTPIGTGNVWNENNSRAIQLSNRDRLLLRKQALRMKKRPVLAVGRSNIVTGV 966

Query: 113  VKTIKAHFQKHPLAIVNIKGRAKGTSVQEVVSKLEQA 3
             K IKAHF+K+PLAIVN+KGRAKGTSVQEVV+KLE+A
Sbjct: 967  AKAIKAHFEKYPLAIVNVKGRAKGTSVQEVVAKLEEA 1003


>gb|KDO72351.1| hypothetical protein CISIN_1g001441mg [Citrus sinensis]
            gi|641853534|gb|KDO72352.1| hypothetical protein
            CISIN_1g001441mg [Citrus sinensis]
            gi|641853535|gb|KDO72353.1| hypothetical protein
            CISIN_1g001441mg [Citrus sinensis]
          Length = 1076

 Score =  469 bits (1207), Expect = e-129
 Identities = 297/577 (51%), Positives = 365/577 (63%), Gaps = 28/577 (4%)
 Frame = -3

Query: 1649 KRLTGGTLLSRDREYIIFYRGKDFLPAAASLAIEERRKYGIHGEKQMTDCNTSVMAMQE- 1473
            KRLTGGTLLSRDRE+I+FYRGKDFLP AAS AIEERRK+         + +TS  + +E 
Sbjct: 464  KRLTGGTLLSRDREFIVFYRGKDFLPPAASSAIEERRKH---------EFSTSNDSKEEP 514

Query: 1472 ---HKFETMEGGSEDECDGINDRKRNRLSEGRKPRSTEAAIERTSTKLHTXXXXXXXXXX 1302
               ++ +     ++DE    ND+K    SE ++ RS E AI RT+ +L            
Sbjct: 515  ELGNRHDNSGDNTQDEFGCTNDQKSTMHSEQKERRSAEVAIRRTNIRLSRVLEKKAEAEK 574

Query: 1301 XXXXXXXXAIHQEPEIDKEGITEEERYMLRRVGLRMKPFLILGRRGVFDGTVENMHLHWK 1122
                       Q  E+DKEGITEEERYMLR+VGLRMK FL++GRRGVFDGTVENMHLHWK
Sbjct: 575  LLAELEEERPEQY-EVDKEGITEEERYMLRKVGLRMKAFLLMGRRGVFDGTVENMHLHWK 633

Query: 1121 YRELVKIIFGGRSTEEVYKIARTLEAESGGILVAVERVSKGYAIIMYRGKNYERPACLRP 942
            +RELVKII   R  E   + ARTLE ESGGILVAVERV+KGYAII+YRGKNYERPACLRP
Sbjct: 634  HRELVKIISKQRKIEAALQEARTLEVESGGILVAVERVNKGYAIILYRGKNYERPACLRP 693

Query: 941  QTLLNKREAMKRSKEAQRRESLKLRVLKLSRNVDELKLQLSSVLTQAKDKETNSMQSAKG 762
            +TLL KREAMKRS EAQRR+SLKL VL+L+RN+++LKLQL       KDKE NS+++   
Sbjct: 694  KTLLTKREAMKRSLEAQRRQSLKLHVLELTRNIEKLKLQL------VKDKEANSLETIDE 747

Query: 761  SELQLVKEQKTNGMQFAENKRSDTELETNCXXXXXSPACSLENVEARERYGAESTFLNSN 582
            S L LVKE+    MQ AE  RSDT  E               NV+AR   GA+ T   SN
Sbjct: 748  SILPLVKEE-IGDMQPAECMRSDTSHEV--------------NVQARGECGADLTSTESN 792

Query: 581  DGMDSSIDTPEITQQDILGDFSIEYEG----KEEGKFNLTAPEPSSEVVFKETNVVMDMN 414
            D  D++ID P   QQD   + S+ + G    + E K +L +    S++     N++ D  
Sbjct: 793  DTGDATIDGPPAIQQDKQTE-SLTHNGISINEIESKSSLKSVSKESQL-----NMIADFF 846

Query: 413  GEGGDVEPATSPDNFR---TNFTHIVNAEPHFSGNKTLAPSDESQKNESS------LSYQ 261
             EG     ++ PDN       +  IV+AE   S N+    S ES K+ SS       S++
Sbjct: 847  AEGVASGTSSCPDNSMQEVMEYNTIVDAEQCSSDNEPRESSIESAKSRSSENEPIEQSFE 906

Query: 260  RAIENGSNGTPF-----------RAARLSNKDRLLLRKQALKMIKRPVLAIGKSNIVTGV 114
             A       TP            RA +LSN+DRLLLRKQAL+M KRPVLA+G+SNIVTGV
Sbjct: 907  LAKGRSGLSTPIGTGNVWNENNSRAIQLSNRDRLLLRKQALRMKKRPVLAVGRSNIVTGV 966

Query: 113  VKTIKAHFQKHPLAIVNIKGRAKGTSVQEVVSKLEQA 3
             K IKAHF+K+PLAIVN+KGRAKGTSVQEVV+KLE+A
Sbjct: 967  AKAIKAHFEKYPLAIVNVKGRAKGTSVQEVVAKLEEA 1003


>gb|KDO72358.1| hypothetical protein CISIN_1g001441mg [Citrus sinensis]
          Length = 1013

 Score =  467 bits (1201), Expect = e-128
 Identities = 296/575 (51%), Positives = 363/575 (63%), Gaps = 28/575 (4%)
 Frame = -3

Query: 1649 KRLTGGTLLSRDREYIIFYRGKDFLPAAASLAIEERRKYGIHGEKQMTDCNTSVMAMQE- 1473
            KRLTGGTLLSRDRE+I+FYRGKDFLP AAS AIEERRK+         + +TS  + +E 
Sbjct: 464  KRLTGGTLLSRDREFIVFYRGKDFLPPAASSAIEERRKH---------EFSTSNDSKEEP 514

Query: 1472 ---HKFETMEGGSEDECDGINDRKRNRLSEGRKPRSTEAAIERTSTKLHTXXXXXXXXXX 1302
               ++ +     ++DE    ND+K    SE ++ RS E AI RT+ +L            
Sbjct: 515  ELGNRHDNSGDNTQDEFGCTNDQKSTMHSEQKERRSAEVAIRRTNIRLSRVLEKKAEAEK 574

Query: 1301 XXXXXXXXAIHQEPEIDKEGITEEERYMLRRVGLRMKPFLILGRRGVFDGTVENMHLHWK 1122
                       Q  E+DKEGITEEERYMLR+VGLRMK FL++GRRGVFDGTVENMHLHWK
Sbjct: 575  LLAELEEERPEQY-EVDKEGITEEERYMLRKVGLRMKAFLLMGRRGVFDGTVENMHLHWK 633

Query: 1121 YRELVKIIFGGRSTEEVYKIARTLEAESGGILVAVERVSKGYAIIMYRGKNYERPACLRP 942
            +RELVKII   R  E   + ARTLE ESGGILVAVERV+KGYAII+YRGKNYERPACLRP
Sbjct: 634  HRELVKIISKQRKIEAALQEARTLEVESGGILVAVERVNKGYAIILYRGKNYERPACLRP 693

Query: 941  QTLLNKREAMKRSKEAQRRESLKLRVLKLSRNVDELKLQLSSVLTQAKDKETNSMQSAKG 762
            +TLL KREAMKRS EAQRR+SLKL VL+L+RN+++LKLQL       KDKE NS+++   
Sbjct: 694  KTLLTKREAMKRSLEAQRRQSLKLHVLELTRNIEKLKLQL------VKDKEANSLETIDE 747

Query: 761  SELQLVKEQKTNGMQFAENKRSDTELETNCXXXXXSPACSLENVEARERYGAESTFLNSN 582
            S L LVKE+    MQ AE  RSDT  E               NV+AR   GA+ T   SN
Sbjct: 748  SILPLVKEE-IGDMQPAECMRSDTSHEV--------------NVQARGECGADLTSTESN 792

Query: 581  DGMDSSIDTPEITQQDILGDFSIEYEG----KEEGKFNLTAPEPSSEVVFKETNVVMDMN 414
            D  D++ID P   QQD   + S+ + G    + E K +L +    S++     N++ D  
Sbjct: 793  DTGDATIDGPPAIQQDKQTE-SLTHNGISINEIESKSSLKSVSKESQL-----NMIADFF 846

Query: 413  GEGGDVEPATSPDNFR---TNFTHIVNAEPHFSGNKTLAPSDESQKNESS------LSYQ 261
             EG     ++ PDN       +  IV+AE   S N+    S ES K+ SS       S++
Sbjct: 847  AEGVASGTSSCPDNSMQEVMEYNTIVDAEQCSSDNEPRESSIESAKSRSSENEPIEQSFE 906

Query: 260  RAIENGSNGTPF-----------RAARLSNKDRLLLRKQALKMIKRPVLAIGKSNIVTGV 114
             A       TP            RA +LSN+DRLLLRKQAL+M KRPVLA+G+SNIVTGV
Sbjct: 907  LAKGRSGLSTPIGTGNVWNENNSRAIQLSNRDRLLLRKQALRMKKRPVLAVGRSNIVTGV 966

Query: 113  VKTIKAHFQKHPLAIVNIKGRAKGTSVQEVVSKLE 9
             K IKAHF+K+PLAIVN+KGRAKGTSVQEVV+KLE
Sbjct: 967  AKAIKAHFEKYPLAIVNVKGRAKGTSVQEVVAKLE 1001


>ref|XP_006482481.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X6 [Citrus sinensis]
          Length = 1031

 Score =  462 bits (1189), Expect = e-127
 Identities = 288/553 (52%), Positives = 350/553 (63%), Gaps = 4/553 (0%)
 Frame = -3

Query: 1649 KRLTGGTLLSRDREYIIFYRGKDFLPAAASLAIEERRKYGIHGEKQMTDCNTSVMAMQE- 1473
            KRLTGGTLLSRDRE+I+FYRGKDFLP AAS AIEERRK+         + +TS  + +E 
Sbjct: 464  KRLTGGTLLSRDREFIVFYRGKDFLPPAASCAIEERRKH---------EFSTSNDSKEEP 514

Query: 1472 ---HKFETMEGGSEDECDGINDRKRNRLSEGRKPRSTEAAIERTSTKLHTXXXXXXXXXX 1302
               ++ +     ++DE    ND+K    SE ++ RS E AI RT+ +L +          
Sbjct: 515  ELGNRHDNSGDNTQDEFGCTNDQKSTMHSEQKERRSAEVAIRRTNIRL-SRALEKKAEAE 573

Query: 1301 XXXXXXXXAIHQEPEIDKEGITEEERYMLRRVGLRMKPFLILGRRGVFDGTVENMHLHWK 1122
                       ++ E+DKEGITEEERYMLR+VGLRMK FL++GRRGVFDGTVENMHLHWK
Sbjct: 574  KLLAELEEETPEQYEVDKEGITEEERYMLRKVGLRMKAFLLMGRRGVFDGTVENMHLHWK 633

Query: 1121 YRELVKIIFGGRSTEEVYKIARTLEAESGGILVAVERVSKGYAIIMYRGKNYERPACLRP 942
            +RELVKII   R  E   + ARTLE ESGGILVAVERV+KGYAII+YRGKNYERPACLRP
Sbjct: 634  HRELVKIISKQRKIEAALQEARTLEVESGGILVAVERVNKGYAIILYRGKNYERPACLRP 693

Query: 941  QTLLNKREAMKRSKEAQRRESLKLRVLKLSRNVDELKLQLSSVLTQAKDKETNSMQSAKG 762
            +TLL KREAMKRS EAQRR+SLKL VL+L+RN+++LKLQL       KDKE NS+++   
Sbjct: 694  KTLLTKREAMKRSLEAQRRQSLKLHVLELTRNIEKLKLQL------VKDKEANSLETIDE 747

Query: 761  SELQLVKEQKTNGMQFAENKRSDTELETNCXXXXXSPACSLENVEARERYGAESTFLNSN 582
            S L LVKE+    MQ AE  RSDT  E               NV+AR   GA+ T   SN
Sbjct: 748  SILPLVKEE-IGDMQPAECMRSDTSHEV--------------NVQARGECGADLTSTESN 792

Query: 581  DGMDSSIDTPEITQQDILGDFSIEYEGKEEGKFNLTAPEPSSEVVFKETNVVMDMNGEGG 402
            D  D++ID P   QQD   + S+ + G   G                 T+   D +    
Sbjct: 793  DTGDATIDGPPAIQQDKQTE-SLTHNGVASG-----------------TSSCPDNSMCSS 834

Query: 401  DVEPATSPDNFRTNFTHIVNAEPHFSGNKTLAPSDESQKNESSLSYQRAIENGSNGTPFR 222
            D EP  S          I +A+   S N+ +  S E  K  S LS      N  N    R
Sbjct: 835  DNEPRES---------SIESAKSRSSENEPIEQSFELAKGRSGLSTPIGTGNVWNENNSR 885

Query: 221  AARLSNKDRLLLRKQALKMIKRPVLAIGKSNIVTGVVKTIKAHFQKHPLAIVNIKGRAKG 42
            A +LSN+DRLLLRKQAL+M KRPVLA+G+SNIVTGV K IKAHF+K+PLAIVN+KGRAKG
Sbjct: 886  AIQLSNRDRLLLRKQALRMKKRPVLAVGRSNIVTGVAKAIKAHFEKYPLAIVNVKGRAKG 945

Query: 41   TSVQEVVSKLEQA 3
            TSVQEVV+KLE+A
Sbjct: 946  TSVQEVVAKLEEA 958


>gb|KDO72357.1| hypothetical protein CISIN_1g001441mg [Citrus sinensis]
          Length = 1031

 Score =  461 bits (1187), Expect = e-127
 Identities = 289/553 (52%), Positives = 348/553 (62%), Gaps = 4/553 (0%)
 Frame = -3

Query: 1649 KRLTGGTLLSRDREYIIFYRGKDFLPAAASLAIEERRKYGIHGEKQMTDCNTSVMAMQE- 1473
            KRLTGGTLLSRDRE+I+FYRGKDFLP AAS AIEERRK+         + +TS  + +E 
Sbjct: 464  KRLTGGTLLSRDREFIVFYRGKDFLPPAASSAIEERRKH---------EFSTSNDSKEEP 514

Query: 1472 ---HKFETMEGGSEDECDGINDRKRNRLSEGRKPRSTEAAIERTSTKLHTXXXXXXXXXX 1302
               ++ +     ++DE    ND+K    SE ++ RS E AI RT+ +L            
Sbjct: 515  ELGNRHDNSGDNTQDEFGCTNDQKSTMHSEQKERRSAEVAIRRTNIRLSRVLEKKAEAEK 574

Query: 1301 XXXXXXXXAIHQEPEIDKEGITEEERYMLRRVGLRMKPFLILGRRGVFDGTVENMHLHWK 1122
                       Q  E+DKEGITEEERYMLR+VGLRMK FL++GRRGVFDGTVENMHLHWK
Sbjct: 575  LLAELEEERPEQY-EVDKEGITEEERYMLRKVGLRMKAFLLMGRRGVFDGTVENMHLHWK 633

Query: 1121 YRELVKIIFGGRSTEEVYKIARTLEAESGGILVAVERVSKGYAIIMYRGKNYERPACLRP 942
            +RELVKII   R  E   + ARTLE ESGGILVAVERV+KGYAII+YRGKNYERPACLRP
Sbjct: 634  HRELVKIISKQRKIEAALQEARTLEVESGGILVAVERVNKGYAIILYRGKNYERPACLRP 693

Query: 941  QTLLNKREAMKRSKEAQRRESLKLRVLKLSRNVDELKLQLSSVLTQAKDKETNSMQSAKG 762
            +TLL KREAMKRS EAQRR+SLKL VL+L+RN+++LKLQL       KDKE NS+++   
Sbjct: 694  KTLLTKREAMKRSLEAQRRQSLKLHVLELTRNIEKLKLQL------VKDKEANSLETIDE 747

Query: 761  SELQLVKEQKTNGMQFAENKRSDTELETNCXXXXXSPACSLENVEARERYGAESTFLNSN 582
            S L LVKE+    MQ AE  RSDT  E               NV+AR   GA+ T   SN
Sbjct: 748  SILPLVKEE-IGDMQPAECMRSDTSHEV--------------NVQARGECGADLTSTESN 792

Query: 581  DGMDSSIDTPEITQQDILGDFSIEYEGKEEGKFNLTAPEPSSEVVFKETNVVMDMNGEGG 402
            D  D++ID P   QQD   + S+ + G   G                 T+   D +    
Sbjct: 793  DTGDATIDGPPAIQQDKQTE-SLTHNGVASG-----------------TSSCPDNSMCSS 834

Query: 401  DVEPATSPDNFRTNFTHIVNAEPHFSGNKTLAPSDESQKNESSLSYQRAIENGSNGTPFR 222
            D EP  S          I +A+   S N+ +  S E  K  S LS      N  N    R
Sbjct: 835  DNEPRES---------SIESAKSRSSENEPIEQSFELAKGRSGLSTPIGTGNVWNENNSR 885

Query: 221  AARLSNKDRLLLRKQALKMIKRPVLAIGKSNIVTGVVKTIKAHFQKHPLAIVNIKGRAKG 42
            A +LSN+DRLLLRKQAL+M KRPVLA+G+SNIVTGV K IKAHF+K+PLAIVN+KGRAKG
Sbjct: 886  AIQLSNRDRLLLRKQALRMKKRPVLAVGRSNIVTGVAKAIKAHFEKYPLAIVNVKGRAKG 945

Query: 41   TSVQEVVSKLEQA 3
            TSVQEVV+KLE+A
Sbjct: 946  TSVQEVVAKLEEA 958


>ref|XP_010255197.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic [Nelumbo nucifera]
          Length = 1034

 Score =  454 bits (1168), Expect = e-124
 Identities = 279/555 (50%), Positives = 346/555 (62%), Gaps = 6/555 (1%)
 Frame = -3

Query: 1649 KRLTGGTLLSRDREYIIFYRGKDFLPAAASLAIEERRKYGIHGEKQMTDCNTSVMAMQEH 1470
            KRLTGG LLSRD E+I+FYRGKDFLP + S AIEERRK+G    KQ  + ++ +  M E 
Sbjct: 436  KRLTGGILLSRDVEFIVFYRGKDFLPPSVSTAIEERRKHGTGRSKQRVENSSLIDNMPET 495

Query: 1469 KFETMEGGSEDECDGINDRKRNRLSEGRKPRSTEAAIERTSTKLHTXXXXXXXXXXXXXX 1290
              +T    S ++ +G  D+KRN +S+  K  S+++AI R +TKL                
Sbjct: 496  DIKTAGHPSANKFEGGYDQKRNLISDKTK-ESSKSAIYRITTKLSLALEKKTKAEKLLAD 554

Query: 1289 XXXXAIHQEPEIDKEGITEEERYMLRRVGLRMKPFLILGRRGVFDGTVENMHLHWKYREL 1110
                   Q+ E D+EGITEEERYMLR+VGLRMKPFL+LGRRGVFDGTVENMHLHWKYREL
Sbjct: 555  LEKAVEPQKQESDREGITEEERYMLRKVGLRMKPFLLLGRRGVFDGTVENMHLHWKYREL 614

Query: 1109 VKIIFGGRSTEEVYKIARTLEAESGGILVAVERVSKGYAIIMYRGKNYERPACLRPQTLL 930
            VK+I   RS E+V + ARTLEAESGGILVAVERV+KG AII+YRGKNY+RP  LRP+TLL
Sbjct: 615  VKVISSERSIEDVQRTARTLEAESGGILVAVERVNKGCAIIVYRGKNYQRPVDLRPRTLL 674

Query: 929  NKREAMKRSKEAQRRESLKLRVLKLSRNVDELKLQLSSVLTQAKDKETNSMQSAKGSELQ 750
            NK+ AMKRS EAQR +SLKL +L+L+R++D+LKLQL +                      
Sbjct: 675  NKKAAMKRSLEAQRHKSLKLHILRLTRDIDQLKLQLGN---------------------- 712

Query: 749  LVKEQKTNGMQFAENKRSDTELETNCXXXXXSPACSLENVEARERYGAESTFLNSNDGMD 570
              +  KTN +Q    K  DTE  T+            E VEA ER+ + ST   SN  M 
Sbjct: 713  --ENMKTNCLQSTAQKIPDTESVTSEIYDSTDSVHDQEGVEAAERHESGSTSTCSNFCMH 770

Query: 569  SSIDTPEITQQDILGDFSIEYEGKEEGKFNLTAPEPSSEVVFKET---NVVMDMNGEGGD 399
             S DT E  +QD   D    YE  E  K  L   E SSE V +ET   N   ++   G  
Sbjct: 771  MSSDTAETPEQDKFVDSISRYE-DETDKAEL---ESSSEQVLEETDSNNFSDEVEERGTG 826

Query: 398  VEPATSPDNF---RTNFTHIVNAEPHFSGNKTLAPSDESQKNESSLSYQRAIENGSNGTP 228
            V  + S  +     T ++   N     S ++T     ES   +  LS  + ++ G+N   
Sbjct: 827  VSISHSESSMWHGGTTYSVNDNGTTGLSEDETRESPVESIGGKPELSVHKDVQKGNNEVS 886

Query: 227  FRAARLSNKDRLLLRKQALKMIKRPVLAIGKSNIVTGVVKTIKAHFQKHPLAIVNIKGRA 48
            FRA+ LSN+DRL+LRKQALKM +RPVLA+GK+NI+TGV K I+ HFQKHPLAIVNIKGRA
Sbjct: 887  FRASPLSNRDRLILRKQALKMKRRPVLAVGKNNIITGVAKAIQIHFQKHPLAIVNIKGRA 946

Query: 47   KGTSVQEVVSKLEQA 3
            KGTSVQEVV  LEQA
Sbjct: 947  KGTSVQEVVFMLEQA 961



 Score = 60.1 bits (144), Expect = 6e-06
 Identities = 35/102 (34%), Positives = 55/102 (53%)
 Frame = -3

Query: 1262 PEIDKEGITEEERYMLRRVGLRMKPFLILGRRGVFDGTVENMHLHWKYRELVKIIFGGRS 1083
            P + +  I E+E   L  +G+ +K  L +G+ G+ +G V  +H  W+  ELVKI F    
Sbjct: 153  PTLAELTIPEQELKRLITIGIGLKKKLKVGKAGITEGIVNGIHERWRRSELVKIRFEDLC 212

Query: 1082 TEEVYKIARTLEAESGGILVAVERVSKGYAIIMYRGKNYERP 957
            +  + +    LE ++GG++V       G  II+YRG NYE P
Sbjct: 213  SMNMKRTHDILERKTGGLVV----WRSGSTIILYRGANYEYP 250


>ref|XP_012849118.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic [Erythranthe guttatus]
            gi|604346236|gb|EYU44699.1| hypothetical protein
            MIMGU_mgv1a000630mg [Erythranthe guttata]
          Length = 1040

 Score =  450 bits (1158), Expect = e-123
 Identities = 276/550 (50%), Positives = 334/550 (60%), Gaps = 1/550 (0%)
 Frame = -3

Query: 1649 KRLTGGTLLSRDREYIIFYRGKDFLPAAASLAIEERRKYGIHGEKQMTDCNTSVMAMQEH 1470
            K LTGGTLLSRDRE+I+ YRGKDFLPAA S AI+ERRKY I   K     N S +  +EH
Sbjct: 456  KWLTGGTLLSRDREFIVLYRGKDFLPAAVSSAIQERRKYEIDASKTRAG-NLSNLNEKEH 514

Query: 1469 KFETMEGGSEDECDGINDRKRNRLSEGRKPRSTEAAIERTSTKLHTXXXXXXXXXXXXXX 1290
            +  T E  +E E     D+   ++ E R+ R +E+A+ERTSTKL                
Sbjct: 515  RHGTKEYATEAEQHNEADQNL-QVREKRRVRFSESAMERTSTKLSMALEKKARAEKLLEE 573

Query: 1289 XXXXAIHQEPEIDKEGITEEERYMLRRVGLRMKPFLILGRRGVFDGTVENMHLHWKYREL 1110
                   Q PE DKEGITEEERYMLR+VGLRMK FL+LGRRGVFDGTVENMHLHWKYREL
Sbjct: 574  LAKEESPQPPETDKEGITEEERYMLRKVGLRMKAFLLLGRRGVFDGTVENMHLHWKYREL 633

Query: 1109 VKIIFGGRSTEEVYKIARTLEAESGGILVAVERVSKGYAIIMYRGKNYERPACLRPQTLL 930
            VK+  G RS EEV+ +ARTLEAESGGILVAVERVSKG+ II+YRGKNY RPA LRPQTLL
Sbjct: 634  VKVCIGNRSIEEVHGVARTLEAESGGILVAVERVSKGFDIIVYRGKNYTRPASLRPQTLL 693

Query: 929  NKREAMKRSKEAQRRESLKLRVLKLSRNVDELKLQLSSVLTQAKDKETNSMQSAKGSELQ 750
            +KREAMKRS EAQRRESLKL VLKLS+N+DELKL++      AKD+ TN     +  EL 
Sbjct: 694  SKREAMKRSLEAQRRESLKLHVLKLSKNIDELKLKM------AKDENTNRPHLTEDLELG 747

Query: 749  LVKEQKTNGMQFAENKRSDTELETNCXXXXXSPACSLENVEARERYGAESTFLNSNDGMD 570
             V                                        RE +  ++T  +  + M 
Sbjct: 748  FV----------------------------------------RESHETDATNKDPEEPMH 767

Query: 569  SSIDTPEITQQDILGDFSIEYEGKEEGKFNLTAPEPSSEVVFKETNVVMDMNGEGGDVEP 390
             S DT  I Q+D+ GD S++ E K    F  T  E     +  E N   D N + G++E 
Sbjct: 768  ISEDTVHIAQKDLPGDVSLQSEVKVNYLFETTEAEVQPTSLSNEGNSFSDKNNQIGNMEF 827

Query: 389  ATSP-DNFRTNFTHIVNAEPHFSGNKTLAPSDESQKNESSLSYQRAIENGSNGTPFRAAR 213
              SP    R N +      P     K+      +   E S   Q+ ++   +  P R+ +
Sbjct: 828  VRSPRSQDRRNSSPSTYIRPQTGRRKSDGGGYRNVDIEPS--GQKPMKERPSLMPSRSVQ 885

Query: 212  LSNKDRLLLRKQALKMIKRPVLAIGKSNIVTGVVKTIKAHFQKHPLAIVNIKGRAKGTSV 33
            LSNK+RLLLRKQAL+M K P+LA+GK N+VTGV KTIK HF+KHPLAIVNIKGRAKGTS 
Sbjct: 886  LSNKERLLLRKQALRMKKIPILAVGKRNVVTGVTKTIKEHFEKHPLAIVNIKGRAKGTSA 945

Query: 32   QEVVSKLEQA 3
            QEV+  LEQ+
Sbjct: 946  QEVIYNLEQS 955