BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00012576
         (1254 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010662742.1| PREDICTED: DNA-directed RNA polymerase III s...   497   e-137
ref|XP_009767760.1| PREDICTED: DNA-directed RNA polymerase III s...   485   e-134
ref|XP_009767753.1| PREDICTED: DNA-directed RNA polymerase III s...   485   e-134
ref|XP_009628006.1| PREDICTED: DNA-directed RNA polymerase III s...   482   e-133
ref|XP_009627999.1| PREDICTED: DNA-directed RNA polymerase III s...   482   e-133
ref|XP_009627995.1| PREDICTED: DNA-directed RNA polymerase III s...   482   e-133
ref|XP_009627989.1| PREDICTED: DNA-directed RNA polymerase III s...   482   e-133
ref|XP_010251272.1| PREDICTED: DNA-directed RNA polymerase III s...   474   e-131
ref|XP_006363319.1| PREDICTED: DNA-directed RNA polymerase III s...   471   e-130
ref|XP_011076159.1| PREDICTED: DNA-directed RNA polymerase III s...   470   e-129
emb|CDP05190.1| unnamed protein product [Coffea canephora]            466   e-128
ref|XP_004240730.1| PREDICTED: DNA-directed RNA polymerase III s...   465   e-128
ref|XP_007038704.1| RNA polymerase III subunit RPC82 family prot...   447   e-123
ref|XP_010035145.1| PREDICTED: DNA-directed RNA polymerase III s...   444   e-122
gb|KCW46437.1| hypothetical protein EUGRSUZ_K00269 [Eucalyptus g...   444   e-122
gb|KDO52031.1| hypothetical protein CISIN_1g009725mg [Citrus sin...   436   e-119
ref|XP_006421933.1| hypothetical protein CICLE_v10004721mg [Citr...   436   e-119
ref|XP_006490400.1| PREDICTED: DNA-directed RNA polymerase III s...   424   e-115
ref|XP_012090252.1| PREDICTED: uncharacterized protein LOC105648...   412   e-112
gb|KHG02841.1| DNA-directed RNA polymerase III subunit RPC3 [Gos...   405   e-110

>ref|XP_010662742.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3 isoform X1
            [Vitis vinifera] gi|302143859|emb|CBI22720.3| unnamed
            protein product [Vitis vinifera]
          Length = 524

 Score =  497 bits (1279), Expect = e-137
 Identities = 268/417 (64%), Positives = 318/417 (76%)
 Frame = -3

Query: 1252 IIEGLIQHGRLSLKQISDRHKDTSNQSEGNCTAQDAVKENFNKLVNARYVERCPAHEPFL 1073
            I+EGL+QHGRL+L+QI DR K  SNQSEG    QDA++E+F KLV A +VERCPA EPFL
Sbjct: 116  ILEGLLQHGRLTLEQILDRAK--SNQSEGEPVVQDALRESFLKLVRAHFVERCPASEPFL 173

Query: 1072 APRDXXXXXXXXXXXXXXXXXXELKTLEERALAAAAPMESIRFLVETYNETDVDEENSKE 893
            AP                    E +T+E+RA+AAAAPM++ RF V     TDVD+     
Sbjct: 174  APPSEEETPARKRGAKSAKLVEEPQTIEQRAIAAAAPMDAKRFSVIINTGTDVDD----- 228

Query: 892  DPSTSVPVGEKRKRGDLESDAVDGNEKTKKEVLWRPNFEEFMWRLRHKACIANVRTRLDD 713
              S +V  GEKRK+  LE D   G    +K+VLWR NFEEF+  LRHKACIANV+TRLDD
Sbjct: 229  --SPNVTAGEKRKQDALELDKETG-ASCEKDVLWRANFEEFVRCLRHKACIANVKTRLDD 285

Query: 712  GAGIVLSAMLEATRSKETKVKMENSVPLSMDAIYEEVIKSEAGRSMTLEHVRASLVQLGC 533
            GA IVLSAMLEATRS+E KVK ENSVPLSMD I+E V+KSEAGRSMTLE VR SL+QLGC
Sbjct: 286  GAAIVLSAMLEATRSEEKKVKTENSVPLSMDTIFEGVMKSEAGRSMTLERVRGSLIQLGC 345

Query: 532  HLPTIGIDETYSIDLKSIIELAQNEEVESIVMKRYGREAYRIFRLLSKAGCLLETDKISD 353
                 G  E+YS+DLK+IIELAQN+EVESI +KRYGR+AYRIFRLLSK+  LLETDKISD
Sbjct: 346  APCVRGAAESYSVDLKNIIELAQNDEVESITLKRYGRDAYRIFRLLSKSCRLLETDKISD 405

Query: 352  TTFVDKKNTAKTLYKLWKDDYLHMEKVTTHGGRPSQFSLWKVNKNSLWEHVLDEIYHAAL 173
            TTFV+KK+TAK LY+LWKD+YL MEK+  HG R SQF LWKV K++LW HVL+E+YH+AL
Sbjct: 406  TTFVEKKDTAKILYQLWKDEYLQMEKLNLHGSRQSQFLLWKVTKDTLWGHVLNEMYHSAL 465

Query: 172  NLRLRTVYEQEKEKEVFQIPREKLVGELGKRHKRLRKVRMVLESSLMNLDDAIMLFH 2
            NL LR  YE E+E+E+ Q+PREK VG LG R +RLRKVR++LESSLM LDDAIMLF+
Sbjct: 466  NLSLRVAYELEQEQEIIQLPREKRVGALGNRFERLRKVRILLESSLMKLDDAIMLFN 522


>ref|XP_009767760.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc3 isoform X2
            [Nicotiana sylvestris]
          Length = 442

 Score =  485 bits (1248), Expect = e-134
 Identities = 262/427 (61%), Positives = 319/427 (74%), Gaps = 10/427 (2%)
 Frame = -3

Query: 1252 IIEGLIQHGRLSLKQISDRHKDTSNQSEGNCTAQDAVKENFNKLVNARYVERCPAHEPFL 1073
            I EGL+QHGRLSL QI DR K TSNQ + +    +A ++NFNKLVNAR+VERCPA EPFL
Sbjct: 27   IFEGLLQHGRLSLNQIIDRFKQTSNQGDSSA---EAARDNFNKLVNARFVERCPAPEPFL 83

Query: 1072 APRDXXXXXXXXXXXXXXXXXXELKTLEERALAAAAPMESIRFLVET--YNETDVDEENS 899
             P                      +T+E+RALAAAAPMES+RFLVET  +NE  V+  + 
Sbjct: 84   GP--PAEDETAAKKQGAKSAKIVKQTIEQRALAAAAPMESMRFLVETVTWNEASVETTDK 141

Query: 898  KEDPSTSVPVGEKRKRGDLESD----AVDGNEKTKKEVLWRPNFEEFMWRLRHKACIANV 731
            K   +T V +G KRK+ +LES+    A D N+     VLWR NFEEF+ RLRHKAC+ANV
Sbjct: 142  K---NTVVTLGTKRKQDNLESNTELLATDENK-----VLWRANFEEFIRRLRHKACVANV 193

Query: 730  RTRLDDGAGIVLSAMLEATRSKETKVKMENSVPLSMDAIYEEVIKSEAGRSMTLEHVRAS 551
            + R+++ A IVL+A LE +R  ETKV+++NSVP S++AIY+EVIK + G  M LE +RAS
Sbjct: 194  KVRVNNDAAIVLAATLELSRHSETKVRIDNSVPQSINAIYDEVIKRDGGLGMDLERIRAS 253

Query: 550  LVQLGCHLPTIGIDETYSIDLKSIIELAQNEEVESIVMKRYGREAYRIFRLLSKAGCLLE 371
            LV+LGC  P + IDETYS+DLK+IIE A+ EEVE IV+KRYGREAYR+FRLLSKA  LLE
Sbjct: 254  LVELGCETPLMAIDETYSVDLKNIIEQARIEEVECIVLKRYGREAYRMFRLLSKADRLLE 313

Query: 370  TDKISDTTFVDKKNTAKTLYKLWKDDYLHMEKVTTHGGRPSQFSLWKVNKNSLWEHVLDE 191
            TDKISDTTFV+KK+ AK L+KLWKDDYL M+KV   G R S+F LWK+NK SLWEHVLDE
Sbjct: 314  TDKISDTTFVEKKDAAKILFKLWKDDYLEMKKVIARGARQSEFILWKINKQSLWEHVLDE 373

Query: 190  IYHAALNLRLRTVYEQEKEKEVFQIPREKLV----GELGKRHKRLRKVRMVLESSLMNLD 23
            +YHAALNLRLR  +EQE+EKE+ Q+PREKLV     EL  R+ RLRKVR+ LESSLMNLD
Sbjct: 374  MYHAALNLRLRITHEQEQEKEILQMPREKLVKELHSELHNRYNRLRKVRITLESSLMNLD 433

Query: 22   DAIMLFH 2
            DA+MLFH
Sbjct: 434  DALMLFH 440


>ref|XP_009767753.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc3 isoform X1
            [Nicotiana sylvestris]
          Length = 539

 Score =  485 bits (1248), Expect = e-134
 Identities = 262/427 (61%), Positives = 319/427 (74%), Gaps = 10/427 (2%)
 Frame = -3

Query: 1252 IIEGLIQHGRLSLKQISDRHKDTSNQSEGNCTAQDAVKENFNKLVNARYVERCPAHEPFL 1073
            I EGL+QHGRLSL QI DR K TSNQ + +    +A ++NFNKLVNAR+VERCPA EPFL
Sbjct: 124  IFEGLLQHGRLSLNQIIDRFKQTSNQGDSSA---EAARDNFNKLVNARFVERCPAPEPFL 180

Query: 1072 APRDXXXXXXXXXXXXXXXXXXELKTLEERALAAAAPMESIRFLVET--YNETDVDEENS 899
             P                      +T+E+RALAAAAPMES+RFLVET  +NE  V+  + 
Sbjct: 181  GP--PAEDETAAKKQGAKSAKIVKQTIEQRALAAAAPMESMRFLVETVTWNEASVETTDK 238

Query: 898  KEDPSTSVPVGEKRKRGDLESD----AVDGNEKTKKEVLWRPNFEEFMWRLRHKACIANV 731
            K   +T V +G KRK+ +LES+    A D N+     VLWR NFEEF+ RLRHKAC+ANV
Sbjct: 239  K---NTVVTLGTKRKQDNLESNTELLATDENK-----VLWRANFEEFIRRLRHKACVANV 290

Query: 730  RTRLDDGAGIVLSAMLEATRSKETKVKMENSVPLSMDAIYEEVIKSEAGRSMTLEHVRAS 551
            + R+++ A IVL+A LE +R  ETKV+++NSVP S++AIY+EVIK + G  M LE +RAS
Sbjct: 291  KVRVNNDAAIVLAATLELSRHSETKVRIDNSVPQSINAIYDEVIKRDGGLGMDLERIRAS 350

Query: 550  LVQLGCHLPTIGIDETYSIDLKSIIELAQNEEVESIVMKRYGREAYRIFRLLSKAGCLLE 371
            LV+LGC  P + IDETYS+DLK+IIE A+ EEVE IV+KRYGREAYR+FRLLSKA  LLE
Sbjct: 351  LVELGCETPLMAIDETYSVDLKNIIEQARIEEVECIVLKRYGREAYRMFRLLSKADRLLE 410

Query: 370  TDKISDTTFVDKKNTAKTLYKLWKDDYLHMEKVTTHGGRPSQFSLWKVNKNSLWEHVLDE 191
            TDKISDTTFV+KK+ AK L+KLWKDDYL M+KV   G R S+F LWK+NK SLWEHVLDE
Sbjct: 411  TDKISDTTFVEKKDAAKILFKLWKDDYLEMKKVIARGARQSEFILWKINKQSLWEHVLDE 470

Query: 190  IYHAALNLRLRTVYEQEKEKEVFQIPREKLV----GELGKRHKRLRKVRMVLESSLMNLD 23
            +YHAALNLRLR  +EQE+EKE+ Q+PREKLV     EL  R+ RLRKVR+ LESSLMNLD
Sbjct: 471  MYHAALNLRLRITHEQEQEKEILQMPREKLVKELHSELHNRYNRLRKVRITLESSLMNLD 530

Query: 22   DAIMLFH 2
            DA+MLFH
Sbjct: 531  DALMLFH 537


>ref|XP_009628006.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc3 isoform X4
            [Nicotiana tomentosiformis]
          Length = 442

 Score =  482 bits (1240), Expect = e-133
 Identities = 260/426 (61%), Positives = 318/426 (74%), Gaps = 10/426 (2%)
 Frame = -3

Query: 1252 IIEGLIQHGRLSLKQISDRHKDTSNQSEGNCTAQDAVKENFNKLVNARYVERCPAHEPFL 1073
            I EGL+QHGRLSL QI DR K TSNQ + +    +A ++NFNKLVNAR+VERCPA EPFL
Sbjct: 27   IFEGLLQHGRLSLNQIIDRFKQTSNQGDSSA---EAARDNFNKLVNARFVERCPAPEPFL 83

Query: 1072 APRDXXXXXXXXXXXXXXXXXXELKTLEERALAAAAPMESIRFLVET--YNETDVDEENS 899
             P                      +T+E+RALAAAAPMES+RFLVET  +NE  V+  + 
Sbjct: 84   GPSAEEETAAKKQGAKSAKIVK--QTIEQRALAAAAPMESMRFLVETDTWNEASVETTDK 141

Query: 898  KEDPSTSVPVGEKRKRGDLESD----AVDGNEKTKKEVLWRPNFEEFMWRLRHKACIANV 731
            K   +T V +G KRK+ +LES+    A D N+     VLWR NFEEF+ RLRHKAC+ANV
Sbjct: 142  K---TTVVTLGTKRKQDNLESNTELLATDENK-----VLWRANFEEFIRRLRHKACVANV 193

Query: 730  RTRLDDGAGIVLSAMLEATRSKETKVKMENSVPLSMDAIYEEVIKSEAGRSMTLEHVRAS 551
            + R+++ A IVL+A LE +R  ETKV+++NSVP S++AIY+EVIK + G  M LE +RAS
Sbjct: 194  KVRVNNDAAIVLAATLELSRHSETKVRIDNSVPQSINAIYDEVIKRDGGLGMDLERIRAS 253

Query: 550  LVQLGCHLPTIGIDETYSIDLKSIIELAQNEEVESIVMKRYGREAYRIFRLLSKAGCLLE 371
            LV+LGC  P + IDETYS+DLK++IE A+ EEVESIV+KRYGREAYR+FRLLSKA  LLE
Sbjct: 254  LVELGCETPLMAIDETYSVDLKNVIEQARIEEVESIVLKRYGREAYRMFRLLSKADRLLE 313

Query: 370  TDKISDTTFVDKKNTAKTLYKLWKDDYLHMEKVTTHGGRPSQFSLWKVNKNSLWEHVLDE 191
            TDKISDTTFV+KK+  K L+KLWKDDYL M+KV   G R S+F LWK+NK SLWEHVLDE
Sbjct: 314  TDKISDTTFVEKKDAVKILFKLWKDDYLEMKKVIARGARQSEFILWKINKQSLWEHVLDE 373

Query: 190  IYHAALNLRLRTVYEQEKEKEVFQIPREKLV----GELGKRHKRLRKVRMVLESSLMNLD 23
            +YHAALNLRLR  +EQE+EKE+ Q+PREKLV     EL  R+ RLRKVR+ LESSLMNLD
Sbjct: 374  MYHAALNLRLRITHEQEQEKEILQMPREKLVKELHSELHNRYNRLRKVRITLESSLMNLD 433

Query: 22   DAIMLF 5
            DA+MLF
Sbjct: 434  DALMLF 439


>ref|XP_009627999.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc3 isoform X3
            [Nicotiana tomentosiformis]
          Length = 535

 Score =  482 bits (1240), Expect = e-133
 Identities = 260/426 (61%), Positives = 318/426 (74%), Gaps = 10/426 (2%)
 Frame = -3

Query: 1252 IIEGLIQHGRLSLKQISDRHKDTSNQSEGNCTAQDAVKENFNKLVNARYVERCPAHEPFL 1073
            I EGL+QHGRLSL QI DR K TSNQ + +    +A ++NFNKLVNAR+VERCPA EPFL
Sbjct: 120  IFEGLLQHGRLSLNQIIDRFKQTSNQGDSSA---EAARDNFNKLVNARFVERCPAPEPFL 176

Query: 1072 APRDXXXXXXXXXXXXXXXXXXELKTLEERALAAAAPMESIRFLVET--YNETDVDEENS 899
             P                      +T+E+RALAAAAPMES+RFLVET  +NE  V+  + 
Sbjct: 177  GPSAEEETAAKKQGAKSAKIVK--QTIEQRALAAAAPMESMRFLVETDTWNEASVETTDK 234

Query: 898  KEDPSTSVPVGEKRKRGDLESD----AVDGNEKTKKEVLWRPNFEEFMWRLRHKACIANV 731
            K   +T V +G KRK+ +LES+    A D N+     VLWR NFEEF+ RLRHKAC+ANV
Sbjct: 235  K---TTVVTLGTKRKQDNLESNTELLATDENK-----VLWRANFEEFIRRLRHKACVANV 286

Query: 730  RTRLDDGAGIVLSAMLEATRSKETKVKMENSVPLSMDAIYEEVIKSEAGRSMTLEHVRAS 551
            + R+++ A IVL+A LE +R  ETKV+++NSVP S++AIY+EVIK + G  M LE +RAS
Sbjct: 287  KVRVNNDAAIVLAATLELSRHSETKVRIDNSVPQSINAIYDEVIKRDGGLGMDLERIRAS 346

Query: 550  LVQLGCHLPTIGIDETYSIDLKSIIELAQNEEVESIVMKRYGREAYRIFRLLSKAGCLLE 371
            LV+LGC  P + IDETYS+DLK++IE A+ EEVESIV+KRYGREAYR+FRLLSKA  LLE
Sbjct: 347  LVELGCETPLMAIDETYSVDLKNVIEQARIEEVESIVLKRYGREAYRMFRLLSKADRLLE 406

Query: 370  TDKISDTTFVDKKNTAKTLYKLWKDDYLHMEKVTTHGGRPSQFSLWKVNKNSLWEHVLDE 191
            TDKISDTTFV+KK+  K L+KLWKDDYL M+KV   G R S+F LWK+NK SLWEHVLDE
Sbjct: 407  TDKISDTTFVEKKDAVKILFKLWKDDYLEMKKVIARGARQSEFILWKINKQSLWEHVLDE 466

Query: 190  IYHAALNLRLRTVYEQEKEKEVFQIPREKLV----GELGKRHKRLRKVRMVLESSLMNLD 23
            +YHAALNLRLR  +EQE+EKE+ Q+PREKLV     EL  R+ RLRKVR+ LESSLMNLD
Sbjct: 467  MYHAALNLRLRITHEQEQEKEILQMPREKLVKELHSELHNRYNRLRKVRITLESSLMNLD 526

Query: 22   DAIMLF 5
            DA+MLF
Sbjct: 527  DALMLF 532


>ref|XP_009627995.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc3 isoform X2
            [Nicotiana tomentosiformis]
          Length = 539

 Score =  482 bits (1240), Expect = e-133
 Identities = 260/426 (61%), Positives = 318/426 (74%), Gaps = 10/426 (2%)
 Frame = -3

Query: 1252 IIEGLIQHGRLSLKQISDRHKDTSNQSEGNCTAQDAVKENFNKLVNARYVERCPAHEPFL 1073
            I EGL+QHGRLSL QI DR K TSNQ + +    +A ++NFNKLVNAR+VERCPA EPFL
Sbjct: 124  IFEGLLQHGRLSLNQIIDRFKQTSNQGDSSA---EAARDNFNKLVNARFVERCPAPEPFL 180

Query: 1072 APRDXXXXXXXXXXXXXXXXXXELKTLEERALAAAAPMESIRFLVET--YNETDVDEENS 899
             P                      +T+E+RALAAAAPMES+RFLVET  +NE  V+  + 
Sbjct: 181  GPSAEEETAAKKQGAKSAKIVK--QTIEQRALAAAAPMESMRFLVETDTWNEASVETTDK 238

Query: 898  KEDPSTSVPVGEKRKRGDLESD----AVDGNEKTKKEVLWRPNFEEFMWRLRHKACIANV 731
            K   +T V +G KRK+ +LES+    A D N+     VLWR NFEEF+ RLRHKAC+ANV
Sbjct: 239  K---TTVVTLGTKRKQDNLESNTELLATDENK-----VLWRANFEEFIRRLRHKACVANV 290

Query: 730  RTRLDDGAGIVLSAMLEATRSKETKVKMENSVPLSMDAIYEEVIKSEAGRSMTLEHVRAS 551
            + R+++ A IVL+A LE +R  ETKV+++NSVP S++AIY+EVIK + G  M LE +RAS
Sbjct: 291  KVRVNNDAAIVLAATLELSRHSETKVRIDNSVPQSINAIYDEVIKRDGGLGMDLERIRAS 350

Query: 550  LVQLGCHLPTIGIDETYSIDLKSIIELAQNEEVESIVMKRYGREAYRIFRLLSKAGCLLE 371
            LV+LGC  P + IDETYS+DLK++IE A+ EEVESIV+KRYGREAYR+FRLLSKA  LLE
Sbjct: 351  LVELGCETPLMAIDETYSVDLKNVIEQARIEEVESIVLKRYGREAYRMFRLLSKADRLLE 410

Query: 370  TDKISDTTFVDKKNTAKTLYKLWKDDYLHMEKVTTHGGRPSQFSLWKVNKNSLWEHVLDE 191
            TDKISDTTFV+KK+  K L+KLWKDDYL M+KV   G R S+F LWK+NK SLWEHVLDE
Sbjct: 411  TDKISDTTFVEKKDAVKILFKLWKDDYLEMKKVIARGARQSEFILWKINKQSLWEHVLDE 470

Query: 190  IYHAALNLRLRTVYEQEKEKEVFQIPREKLV----GELGKRHKRLRKVRMVLESSLMNLD 23
            +YHAALNLRLR  +EQE+EKE+ Q+PREKLV     EL  R+ RLRKVR+ LESSLMNLD
Sbjct: 471  MYHAALNLRLRITHEQEQEKEILQMPREKLVKELHSELHNRYNRLRKVRITLESSLMNLD 530

Query: 22   DAIMLF 5
            DA+MLF
Sbjct: 531  DALMLF 536


>ref|XP_009627989.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc3 isoform X1
            [Nicotiana tomentosiformis]
          Length = 543

 Score =  482 bits (1240), Expect = e-133
 Identities = 260/426 (61%), Positives = 318/426 (74%), Gaps = 10/426 (2%)
 Frame = -3

Query: 1252 IIEGLIQHGRLSLKQISDRHKDTSNQSEGNCTAQDAVKENFNKLVNARYVERCPAHEPFL 1073
            I EGL+QHGRLSL QI DR K TSNQ + +    +A ++NFNKLVNAR+VERCPA EPFL
Sbjct: 128  IFEGLLQHGRLSLNQIIDRFKQTSNQGDSSA---EAARDNFNKLVNARFVERCPAPEPFL 184

Query: 1072 APRDXXXXXXXXXXXXXXXXXXELKTLEERALAAAAPMESIRFLVET--YNETDVDEENS 899
             P                      +T+E+RALAAAAPMES+RFLVET  +NE  V+  + 
Sbjct: 185  GPSAEEETAAKKQGAKSAKIVK--QTIEQRALAAAAPMESMRFLVETDTWNEASVETTDK 242

Query: 898  KEDPSTSVPVGEKRKRGDLESD----AVDGNEKTKKEVLWRPNFEEFMWRLRHKACIANV 731
            K   +T V +G KRK+ +LES+    A D N+     VLWR NFEEF+ RLRHKAC+ANV
Sbjct: 243  K---TTVVTLGTKRKQDNLESNTELLATDENK-----VLWRANFEEFIRRLRHKACVANV 294

Query: 730  RTRLDDGAGIVLSAMLEATRSKETKVKMENSVPLSMDAIYEEVIKSEAGRSMTLEHVRAS 551
            + R+++ A IVL+A LE +R  ETKV+++NSVP S++AIY+EVIK + G  M LE +RAS
Sbjct: 295  KVRVNNDAAIVLAATLELSRHSETKVRIDNSVPQSINAIYDEVIKRDGGLGMDLERIRAS 354

Query: 550  LVQLGCHLPTIGIDETYSIDLKSIIELAQNEEVESIVMKRYGREAYRIFRLLSKAGCLLE 371
            LV+LGC  P + IDETYS+DLK++IE A+ EEVESIV+KRYGREAYR+FRLLSKA  LLE
Sbjct: 355  LVELGCETPLMAIDETYSVDLKNVIEQARIEEVESIVLKRYGREAYRMFRLLSKADRLLE 414

Query: 370  TDKISDTTFVDKKNTAKTLYKLWKDDYLHMEKVTTHGGRPSQFSLWKVNKNSLWEHVLDE 191
            TDKISDTTFV+KK+  K L+KLWKDDYL M+KV   G R S+F LWK+NK SLWEHVLDE
Sbjct: 415  TDKISDTTFVEKKDAVKILFKLWKDDYLEMKKVIARGARQSEFILWKINKQSLWEHVLDE 474

Query: 190  IYHAALNLRLRTVYEQEKEKEVFQIPREKLV----GELGKRHKRLRKVRMVLESSLMNLD 23
            +YHAALNLRLR  +EQE+EKE+ Q+PREKLV     EL  R+ RLRKVR+ LESSLMNLD
Sbjct: 475  MYHAALNLRLRITHEQEQEKEILQMPREKLVKELHSELHNRYNRLRKVRITLESSLMNLD 534

Query: 22   DAIMLF 5
            DA+MLF
Sbjct: 535  DALMLF 540


>ref|XP_010251272.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3 [Nelumbo
            nucifera]
          Length = 531

 Score =  474 bits (1219), Expect = e-131
 Identities = 248/417 (59%), Positives = 308/417 (73%)
 Frame = -3

Query: 1252 IIEGLIQHGRLSLKQISDRHKDTSNQSEGNCTAQDAVKENFNKLVNARYVERCPAHEPFL 1073
            I+EGL QHGRL+L+QI  R    SNQ+EGN T QDAV+E+F ++V++ YVERCPA EPFL
Sbjct: 116  ILEGLFQHGRLTLEQIILRA--VSNQNEGNSTVQDAVRESFVRIVSSHYVERCPASEPFL 173

Query: 1072 APRDXXXXXXXXXXXXXXXXXXELKTLEERALAAAAPMESIRFLVETYNETDVDEENSKE 893
            AP D                   ++TLE+RA++AAAP+ES RF V T   TDV   +   
Sbjct: 174  APPDEEENPTKKRAKSARLAEE-IETLEKRAISAAAPLESERFAVITDTGTDVKSGDRSG 232

Query: 892  DPSTSVPVGEKRKRGDLESDAVDGNEKTKKEVLWRPNFEEFMWRLRHKACIANVRTRLDD 713
                   +GEKRK   LE D        +KEVLWR NFE F+ RLRHKAC+ANVR R+DD
Sbjct: 233  SRFLDTAIGEKRKHEALEMDRETMATICEKEVLWRANFEAFIRRLRHKACVANVRARMDD 292

Query: 712  GAGIVLSAMLEATRSKETKVKMENSVPLSMDAIYEEVIKSEAGRSMTLEHVRASLVQLGC 533
            GA  VL+AMLEATR+ E+++K ENSVPLSMDAI  EV+KSE GRSMT+E VRA+L QLGC
Sbjct: 293  GACTVLNAMLEATRNAESRIKTENSVPLSMDAILAEVMKSEGGRSMTVERVRAALGQLGC 352

Query: 532  HLPTIGIDETYSIDLKSIIELAQNEEVESIVMKRYGREAYRIFRLLSKAGCLLETDKISD 353
                 G ++++S+DL++IIE+AQN+E+ESIV+KRYGR+AYRIFRLLSK G L+ETDKISD
Sbjct: 353  RSSPRGAEDSHSVDLRNIIEIAQNDEMESIVLKRYGRDAYRIFRLLSKTGRLVETDKISD 412

Query: 352  TTFVDKKNTAKTLYKLWKDDYLHMEKVTTHGGRPSQFSLWKVNKNSLWEHVLDEIYHAAL 173
             TFVDKK   K LY LWKD+YLHMEK+T+ G + S F LWKVN++SLW+ +LDE+ HAAL
Sbjct: 413  ITFVDKKEAPKILYNLWKDNYLHMEKLTSQGSKQSDFLLWKVNRSSLWKQILDEMCHAAL 472

Query: 172  NLRLRTVYEQEKEKEVFQIPREKLVGELGKRHKRLRKVRMVLESSLMNLDDAIMLFH 2
            NL  R  YE E+E E+ Q+PREK VG  GKR +R+RKV+++LESSLM LDDAIMLFH
Sbjct: 473  NLSQRLAYEFEQEHEILQLPREKRVGAQGKRFERIRKVKVILESSLMKLDDAIMLFH 529


>ref|XP_006363319.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc3-like [Solanum
            tuberosum]
          Length = 525

 Score =  471 bits (1213), Expect = e-130
 Identities = 243/417 (58%), Positives = 314/417 (75%)
 Frame = -3

Query: 1252 IIEGLIQHGRLSLKQISDRHKDTSNQSEGNCTAQDAVKENFNKLVNARYVERCPAHEPFL 1073
            I EGL+QHGRL+L +I +R+K+ S Q + +    DA +++FN LVNAR+VERCPA +P L
Sbjct: 116  IFEGLLQHGRLTLTEIIERYKEASKQGDSSA---DAARDSFNSLVNARFVERCPAPDPLL 172

Query: 1072 APRDXXXXXXXXXXXXXXXXXXELKTLEERALAAAAPMESIRFLVETYNETDVDEENSKE 893
             P                    + +T+E++ALAAAAPMES+RFLVE      V+  + + 
Sbjct: 173  EP--PAAEETAAKKRGAKSAKIQAQTMEQQALAAAAPMESMRFLVEDIWNDSVERADKR- 229

Query: 892  DPSTSVPVGEKRKRGDLESDAVDGNEKTKKEVLWRPNFEEFMWRLRHKACIANVRTRLDD 713
              +T V  G KRK+GDLES+  D +   KKEVLWR NFEEF+ RLRHKAC+ANV+ R+++
Sbjct: 230  --TTDVKCGMKRKQGDLESNTKD-SATGKKEVLWRANFEEFIRRLRHKACVANVKVRVNN 286

Query: 712  GAGIVLSAMLEATRSKETKVKMENSVPLSMDAIYEEVIKSEAGRSMTLEHVRASLVQLGC 533
             A +VL+A LE +R  ETK++++NSVP S++AIY+EVIK E G  M LE +RASL  LGC
Sbjct: 287  DAAVVLAATLELSRHSETKLRIDNSVPQSINAIYDEVIKREGGLGMDLERIRASLDDLGC 346

Query: 532  HLPTIGIDETYSIDLKSIIELAQNEEVESIVMKRYGREAYRIFRLLSKAGCLLETDKISD 353
              P + IDETYS+DLK+IIE A+ EEVESIV+KRYGREAYR+FRLLSKA  L+ETDKISD
Sbjct: 347  EAPLMEIDETYSVDLKNIIEQARIEEVESIVLKRYGREAYRMFRLLSKADRLVETDKISD 406

Query: 352  TTFVDKKNTAKTLYKLWKDDYLHMEKVTTHGGRPSQFSLWKVNKNSLWEHVLDEIYHAAL 173
            TTFV+KK+  K L+KLWKDDYL M+KV     + S+F LWK+NK SLWEH+LDE+YHAAL
Sbjct: 407  TTFVEKKDAVKILFKLWKDDYLEMKKVIARAAKQSEFILWKINKQSLWEHILDEMYHAAL 466

Query: 172  NLRLRTVYEQEKEKEVFQIPREKLVGELGKRHKRLRKVRMVLESSLMNLDDAIMLFH 2
            NLRLR  +E+E+EKE+ Q+P++KLVGELG ++ RLRKV +VLESSLMNLDD++MLFH
Sbjct: 467  NLRLRITHEKEQEKEILQMPKDKLVGELGNKYMRLRKVCIVLESSLMNLDDSLMLFH 523


>ref|XP_011076159.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc3 isoform X1
            [Sesamum indicum]
          Length = 525

 Score =  470 bits (1209), Expect = e-129
 Identities = 251/417 (60%), Positives = 306/417 (73%)
 Frame = -3

Query: 1252 IIEGLIQHGRLSLKQISDRHKDTSNQSEGNCTAQDAVKENFNKLVNARYVERCPAHEPFL 1073
            I +GLIQHGRLS+ QI DR++ T+  ++ +      V+E+FN+L+ AR++ERCPA EPFL
Sbjct: 116  IFQGLIQHGRLSINQIIDRNEQTAGSADVH-----VVRESFNRLLIARFIERCPAPEPFL 170

Query: 1072 APRDXXXXXXXXXXXXXXXXXXELKTLEERALAAAAPMESIRFLVETYNETDVDEENSKE 893
            AP                    E +T E+RALAAAAPM+S+RFL+E     D   E   E
Sbjct: 171  APPADGETPAKKRGAKSAKIGEERQTTEQRALAAAAPMDSMRFLMEM----DDPSEEKSE 226

Query: 892  DPSTSVPVGEKRKRGDLESDAVDGNEKTKKEVLWRPNFEEFMWRLRHKACIANVRTRLDD 713
            + + SV VGEKRK+  L+SD    +   KKEVLWR NFEE + RLRHKAC++ V+ R++D
Sbjct: 227  ECTNSVTVGEKRKQDVLKSDEDALDADKKKEVLWRVNFEELVRRLRHKACVSYVKMRIND 286

Query: 712  GAGIVLSAMLEATRSKETKVKMENSVPLSMDAIYEEVIKSEAGRSMTLEHVRASLVQLGC 533
             A IVLSAMLE +R  ET+ K ENS  LS++AIY+EVIK E G  M  E +RASL QLGC
Sbjct: 287  EAAIVLSAMLELSRHSETRQKAENSAYLSINAIYDEVIKKEGGLGMDFERIRASLEQLGC 346

Query: 532  HLPTIGIDETYSIDLKSIIELAQNEEVESIVMKRYGREAYRIFRLLSKAGCLLETDKISD 353
                 G+DE YSID+K IIE AQ EEVES+V++RYGREAYRIFRLLSKAG  LE+DKISD
Sbjct: 347  QCLETGVDENYSIDIKGIIESAQTEEVESVVLRRYGREAYRIFRLLSKAGRFLESDKISD 406

Query: 352  TTFVDKKNTAKTLYKLWKDDYLHMEKVTTHGGRPSQFSLWKVNKNSLWEHVLDEIYHAAL 173
            TTFV+KK+T K LYKLWKDDYLHMEKV T G + S F LW+VNK  L EHVLDE+YHAAL
Sbjct: 407  TTFVEKKDTIKILYKLWKDDYLHMEKVMTSGAKQSLFLLWRVNKEPLREHVLDEMYHAAL 466

Query: 172  NLRLRTVYEQEKEKEVFQIPREKLVGELGKRHKRLRKVRMVLESSLMNLDDAIMLFH 2
            NLRLR  +EQ+K KE+ Q+PREKLVGEL KR+K L KVR++LESSLMNLD+AIMLFH
Sbjct: 467  NLRLRIAHEQDKGKEILQLPREKLVGELEKRYKLLGKVRVILESSLMNLDEAIMLFH 523


>emb|CDP05190.1| unnamed protein product [Coffea canephora]
          Length = 618

 Score =  466 bits (1199), Expect = e-128
 Identities = 244/419 (58%), Positives = 312/419 (74%), Gaps = 2/419 (0%)
 Frame = -3

Query: 1252 IIEGLIQHGRLSLKQISDRHKDTSNQSEGNCTAQDAVKENFNKLVNARYVERCPAHEPFL 1073
            + E L+QHGRLS  QI DR K T ++ E      D +KE+FNKLVN R+VERCPA EPFL
Sbjct: 116  VFEALLQHGRLSFNQIVDREKQTVSKEENFDV--DHLKESFNKLVNGRFVERCPAPEPFL 173

Query: 1072 APRDXXXXXXXXXXXXXXXXXXELKTLEERALAAAAPMESIRFLVETYNETDVDEENSKE 893
            AP                      +++E+RALAAAAPMES+RFL ET+N +D  +++S E
Sbjct: 174  APPSDEETPAKKRGAKSTKVGDVSESIEQRALAAAAPMESLRFLAETHNWSDFSDKSS-E 232

Query: 892  DPSTSVPVGEKRKRGDLESDAVDGNEKTKKEVLWRPNFEEFMWRLRHKACIANVRTRLDD 713
            +  TSV  GEKRK+  LE+D    ++  KKEVLWR NFEE + RLRH+ACIAN ++RL+D
Sbjct: 233  EKFTSVKTGEKRKQDFLETDGGLLDQDEKKEVLWRVNFEELIRRLRHQACIANAKSRLND 292

Query: 712  GAGIVLSAMLEATRSKETKVKMENSVPLSMDAIYEEVIKSEAGRSMTLEHVRASLVQLGC 533
              GI+L A+LE TRS E+KV + ++  +S++ IY+EVIK + G  M LE +RASLV+LGC
Sbjct: 293  ECGIILGAILELTRSSESKVNIGSTASVSINDIYDEVIKKKGGLGMNLERIRASLVELGC 352

Query: 532  HLPTIGIDETYSIDLKSIIELAQNEEVESIVMKRYGREAYRIFRLLSKAGCLLETDKISD 353
             +P +   E YSIDLKSII++AQNEEVESIV+KRYGREAYR+FR LSK+GCL ETDKI+D
Sbjct: 353  EMPMLV--EEYSIDLKSIIDMAQNEEVESIVLKRYGREAYRMFRFLSKSGCLHETDKIAD 410

Query: 352  TTFVDKKNTAKTLYKLWKDDYLHMEKVTTHGGRPSQFSLWKVNKNSLWEHVLDEIYHAAL 173
            TTFV+KK+  K LYKLWKDDYL MEKVT +G R + F LWKVN+ SL +HVLDE+YHAAL
Sbjct: 411  TTFVEKKDAIKILYKLWKDDYLQMEKVTVNGARQTHFLLWKVNRQSLCQHVLDEMYHAAL 470

Query: 172  NLRLRTVYEQEKEKEVFQIPREKL--VGELGKRHKRLRKVRMVLESSLMNLDDAIMLFH 2
            NLRLR  +E ++EKE+ Q+P++K+  V EL KR+ RL+KV ++ ESSLMNLDDA+MLFH
Sbjct: 471  NLRLRIAHELDQEKEILQMPKDKVGEVEELRKRYMRLKKVSIIYESSLMNLDDALMLFH 529


>ref|XP_004240730.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3 [Solanum
            lycopersicum]
          Length = 525

 Score =  465 bits (1197), Expect = e-128
 Identities = 243/417 (58%), Positives = 313/417 (75%)
 Frame = -3

Query: 1252 IIEGLIQHGRLSLKQISDRHKDTSNQSEGNCTAQDAVKENFNKLVNARYVERCPAHEPFL 1073
            I+E L+QHGRLSL QI  ++K  S Q + +    DA +++FN+LVNAR+VERCPA +P L
Sbjct: 116  ILEWLLQHGRLSLSQIIVKYKQASKQGDSSA---DAAQDSFNRLVNARFVERCPAPDPLL 172

Query: 1072 APRDXXXXXXXXXXXXXXXXXXELKTLEERALAAAAPMESIRFLVETYNETDVDEENSKE 893
             P                    + +T+E++ALAAAAPMES+RFLVE      V++ + + 
Sbjct: 173  EP--PAEEETAAKKRGAKSAKIQAQTMEQQALAAAAPMESMRFLVENIWNDSVEKADKR- 229

Query: 892  DPSTSVPVGEKRKRGDLESDAVDGNEKTKKEVLWRPNFEEFMWRLRHKACIANVRTRLDD 713
              +T V  G KRK+ DLES+  D     +KEVLWR NFEEF+ RLRHKAC+ANV+ R+++
Sbjct: 230  --TTDVKCGMKRKQEDLESNTKDP-ATGEKEVLWRANFEEFIRRLRHKACVANVKVRVNN 286

Query: 712  GAGIVLSAMLEATRSKETKVKMENSVPLSMDAIYEEVIKSEAGRSMTLEHVRASLVQLGC 533
             A IVL+A LE +R  ETK++++NSVP S++AIY+EVIK E G  M LE +RASL  LGC
Sbjct: 287  DAAIVLAATLELSRHSETKLRIDNSVPQSINAIYDEVIKREGGLGMDLERIRASLDDLGC 346

Query: 532  HLPTIGIDETYSIDLKSIIELAQNEEVESIVMKRYGREAYRIFRLLSKAGCLLETDKISD 353
              P + IDETYS+DLK+IIE A+ EEVESIV+KRYGREAYR+FRLLSKA  L+ETDKISD
Sbjct: 347  EAPLMEIDETYSVDLKNIIEQARIEEVESIVLKRYGREAYRMFRLLSKADRLVETDKISD 406

Query: 352  TTFVDKKNTAKTLYKLWKDDYLHMEKVTTHGGRPSQFSLWKVNKNSLWEHVLDEIYHAAL 173
            TTFV+KK+  K L+KLWKDDYL M+KV     + S+F LWK+NK SLWEH+LDE+YHAAL
Sbjct: 407  TTFVEKKDAVKILFKLWKDDYLEMKKVIARAPKQSEFILWKINKQSLWEHILDEMYHAAL 466

Query: 172  NLRLRTVYEQEKEKEVFQIPREKLVGELGKRHKRLRKVRMVLESSLMNLDDAIMLFH 2
            NLRLRT +E+E+EKE+ Q+P++KLVGELG ++ RLRKV +VLESSLMNLDD++MLFH
Sbjct: 467  NLRLRTTHEKEQEKEILQMPKDKLVGELGNKYMRLRKVCIVLESSLMNLDDSLMLFH 523


>ref|XP_007038704.1| RNA polymerase III subunit RPC82 family protein, putative isoform 1
            [Theobroma cacao] gi|508775949|gb|EOY23205.1| RNA
            polymerase III subunit RPC82 family protein, putative
            isoform 1 [Theobroma cacao]
          Length = 523

 Score =  447 bits (1150), Expect = e-123
 Identities = 246/417 (58%), Positives = 299/417 (71%)
 Frame = -3

Query: 1252 IIEGLIQHGRLSLKQISDRHKDTSNQSEGNCTAQDAVKENFNKLVNARYVERCPAHEPFL 1073
            +IE L+ HGRL+LKQ+SDR K  S Q+EG+    DAV+E F KL+NA +VERCPA EP L
Sbjct: 116  LIEALLLHGRLTLKQMSDRAK--SAQNEGDDVILDAVREAFIKLLNAHFVERCPAAEPVL 173

Query: 1072 APRDXXXXXXXXXXXXXXXXXXELKTLEERALAAAAPMESIRFLVETYNETDVDEENSKE 893
                                    +TLE+R L AA P E++RFL+ T  E   D     E
Sbjct: 174  TKPTEEETSARKRVPKSAKILEGKETLEQRVLEAATPSEALRFLLVTRTEPAADG-GKDE 232

Query: 892  DPSTSVPVGEKRKRGDLESDAVDGNEKTKKEVLWRPNFEEFMWRLRHKACIANVRTRLDD 713
            + S+S+ VG+KRK   LES+  +G    ++ VLWR NFEEF+ RLRHKA I NVR  LDD
Sbjct: 233  NNSSSMTVGKKRKLDALESET-EGEATDEQVVLWRANFEEFIRRLRHKAFIENVRACLDD 291

Query: 712  GAGIVLSAMLEATRSKETKVKMENSVPLSMDAIYEEVIKSEAGRSMTLEHVRASLVQLGC 533
            GA IV+SAMLEATR+ E KVK ENSVPLS+++IYEEVIKSE GR++T + VRASLVQL C
Sbjct: 292  GAVIVISAMLEATRTAEKKVKTENSVPLSLNSIYEEVIKSEEGRNITFDRVRASLVQLSC 351

Query: 532  HLPTIGIDETYSIDLKSIIELAQNEEVESIVMKRYGREAYRIFRLLSKAGCLLETDKISD 353
                  ++E+YSID K IIELAQN+EVESIV+KRYGR+AYR+FRLLS    LLETDKI+D
Sbjct: 352  PPFVKAVNESYSIDFKKIIELAQNDEVESIVLKRYGRDAYRMFRLLSSTARLLETDKIAD 411

Query: 352  TTFVDKKNTAKTLYKLWKDDYLHMEKVTTHGGRPSQFSLWKVNKNSLWEHVLDEIYHAAL 173
            T FV+KK+T K LYKLWKDDYLHMEK+   G R SQF LWKVNKN+LWEHVLDE++HAAL
Sbjct: 412  TAFVEKKDTTKILYKLWKDDYLHMEKLQLTGARQSQFLLWKVNKNTLWEHVLDEMFHAAL 471

Query: 172  NLRLRTVYEQEKEKEVFQIPREKLVGELGKRHKRLRKVRMVLESSLMNLDDAIMLFH 2
            NL LR  +E E+EKE+  +P++       KR  RLRKVR++LESS M LDDAIMLFH
Sbjct: 472  NLSLRVAHELEQEKELLNLPQD-------KRVNRLRKVRLLLESSQMKLDDAIMLFH 521


>ref|XP_010035145.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc3 [Eucalyptus
            grandis]
          Length = 522

 Score =  444 bits (1142), Expect = e-122
 Identities = 239/417 (57%), Positives = 295/417 (70%)
 Frame = -3

Query: 1252 IIEGLIQHGRLSLKQISDRHKDTSNQSEGNCTAQDAVKENFNKLVNARYVERCPAHEPFL 1073
            + +GL+QHGRL+L+++ DR K     S    TAQDA +E  +KL NAR+VE CP  EP L
Sbjct: 118  LFQGLLQHGRLTLEKMIDRAKSGQEDS----TAQDATREALSKLANARFVEHCPDPEPHL 173

Query: 1072 APRDXXXXXXXXXXXXXXXXXXELKTLEERALAAAAPMESIRFLVETYNETDVDEENSKE 893
            +P                      +T+EER LAAA PME+ RFL+     T   EE+ ++
Sbjct: 174  SPPSEEAPARKRTKSSKMVAEP--ETIEERVLAAATPMEAKRFLIIFDTTT---EEDGQK 228

Query: 892  DPSTSVPVGEKRKRGDLESDAVDGNEKTKKEVLWRPNFEEFMWRLRHKACIANVRTRLDD 713
               + + VGEKRK   LES+   G++   ++VLWR N +EFM R RHKAC+ NVR RLD 
Sbjct: 229  TGDSFLGVGEKRKSDALESNKELGSDG--EQVLWRVNVQEFMHRFRHKACVENVRERLDG 286

Query: 712  GAGIVLSAMLEATRSKETKVKMENSVPLSMDAIYEEVIKSEAGRSMTLEHVRASLVQLGC 533
            GA + LSAMLE ++S E KVK +NSVPLS++ IYEEV+K EAGR+MTL+H+RASLV LGC
Sbjct: 287  GAAVALSAMLEISKSMEKKVKTDNSVPLSINTIYEEVMKGEAGRAMTLDHLRASLVMLGC 346

Query: 532  HLPTIGIDETYSIDLKSIIELAQNEEVESIVMKRYGREAYRIFRLLSKAGCLLETDKISD 353
                 G+DE+Y IDLK+IIE AQNEEVESIV+KRYG+EAYRIFRLLSKA CLLET KISD
Sbjct: 347  EK---GVDESYKIDLKNIIEQAQNEEVESIVLKRYGQEAYRIFRLLSKANCLLETGKISD 403

Query: 352  TTFVDKKNTAKTLYKLWKDDYLHMEKVTTHGGRPSQFSLWKVNKNSLWEHVLDEIYHAAL 173
            T FVDKK  +K L++LWKD +LHMEK+   G R +QF LWKV+K +LW HVLDE+YHA L
Sbjct: 404  TAFVDKKEISKILFRLWKDQFLHMEKIVVTGPRQTQFLLWKVDKTTLWPHVLDEMYHAVL 463

Query: 172  NLRLRTVYEQEKEKEVFQIPREKLVGELGKRHKRLRKVRMVLESSLMNLDDAIMLFH 2
            NL LR  YE EKE E+  +P EK  G L KR+ RLR VR++LESSLM LDDAIMLFH
Sbjct: 464  NLNLRVAYELEKENELLNLPIEKRSGPLEKRYNRLRTVRLLLESSLMKLDDAIMLFH 520


>gb|KCW46437.1| hypothetical protein EUGRSUZ_K00269 [Eucalyptus grandis]
            gi|629079993|gb|KCW46438.1| hypothetical protein
            EUGRSUZ_K00269 [Eucalyptus grandis]
          Length = 554

 Score =  444 bits (1142), Expect = e-122
 Identities = 239/417 (57%), Positives = 295/417 (70%)
 Frame = -3

Query: 1252 IIEGLIQHGRLSLKQISDRHKDTSNQSEGNCTAQDAVKENFNKLVNARYVERCPAHEPFL 1073
            + +GL+QHGRL+L+++ DR K     S    TAQDA +E  +KL NAR+VE CP  EP L
Sbjct: 150  LFQGLLQHGRLTLEKMIDRAKSGQEDS----TAQDATREALSKLANARFVEHCPDPEPHL 205

Query: 1072 APRDXXXXXXXXXXXXXXXXXXELKTLEERALAAAAPMESIRFLVETYNETDVDEENSKE 893
            +P                      +T+EER LAAA PME+ RFL+     T   EE+ ++
Sbjct: 206  SPPSEEAPARKRTKSSKMVAEP--ETIEERVLAAATPMEAKRFLIIFDTTT---EEDGQK 260

Query: 892  DPSTSVPVGEKRKRGDLESDAVDGNEKTKKEVLWRPNFEEFMWRLRHKACIANVRTRLDD 713
               + + VGEKRK   LES+   G++   ++VLWR N +EFM R RHKAC+ NVR RLD 
Sbjct: 261  TGDSFLGVGEKRKSDALESNKELGSDG--EQVLWRVNVQEFMHRFRHKACVENVRERLDG 318

Query: 712  GAGIVLSAMLEATRSKETKVKMENSVPLSMDAIYEEVIKSEAGRSMTLEHVRASLVQLGC 533
            GA + LSAMLE ++S E KVK +NSVPLS++ IYEEV+K EAGR+MTL+H+RASLV LGC
Sbjct: 319  GAAVALSAMLEISKSMEKKVKTDNSVPLSINTIYEEVMKGEAGRAMTLDHLRASLVMLGC 378

Query: 532  HLPTIGIDETYSIDLKSIIELAQNEEVESIVMKRYGREAYRIFRLLSKAGCLLETDKISD 353
                 G+DE+Y IDLK+IIE AQNEEVESIV+KRYG+EAYRIFRLLSKA CLLET KISD
Sbjct: 379  EK---GVDESYKIDLKNIIEQAQNEEVESIVLKRYGQEAYRIFRLLSKANCLLETGKISD 435

Query: 352  TTFVDKKNTAKTLYKLWKDDYLHMEKVTTHGGRPSQFSLWKVNKNSLWEHVLDEIYHAAL 173
            T FVDKK  +K L++LWKD +LHMEK+   G R +QF LWKV+K +LW HVLDE+YHA L
Sbjct: 436  TAFVDKKEISKILFRLWKDQFLHMEKIVVTGPRQTQFLLWKVDKTTLWPHVLDEMYHAVL 495

Query: 172  NLRLRTVYEQEKEKEVFQIPREKLVGELGKRHKRLRKVRMVLESSLMNLDDAIMLFH 2
            NL LR  YE EKE E+  +P EK  G L KR+ RLR VR++LESSLM LDDAIMLFH
Sbjct: 496  NLNLRVAYELEKENELLNLPIEKRSGPLEKRYNRLRTVRLLLESSLMKLDDAIMLFH 552


>gb|KDO52031.1| hypothetical protein CISIN_1g009725mg [Citrus sinensis]
          Length = 523

 Score =  436 bits (1121), Expect = e-119
 Identities = 238/417 (57%), Positives = 296/417 (70%)
 Frame = -3

Query: 1252 IIEGLIQHGRLSLKQISDRHKDTSNQSEGNCTAQDAVKENFNKLVNARYVERCPAHEPFL 1073
            +++GL++HGRL+LKQ+ DR K  S++ EGN    D+++E   KLV A YVERCPA EP L
Sbjct: 112  LVQGLLEHGRLTLKQMFDRAK--SSEKEGNLVDLDSLRETLVKLVTAHYVERCPASEPLL 169

Query: 1072 APRDXXXXXXXXXXXXXXXXXXELKTLEERALAAAAPMESIRFLVETYNETDVDEENSKE 893
             P                    E +T+E++ + AA PME++RF V T  E+DV E   KE
Sbjct: 170  MPISEEEGPARKKGSKSAKKIGEPETIEQQVVEAALPMEAMRFSVVTNVESDVGE---KE 226

Query: 892  DPSTSVPVGEKRKRGDLESDAVDGNEKTKKEVLWRPNFEEFMWRLRHKACIANVRTRLDD 713
              S +V  GEKRK   LE D  +     ++ V++R NFE F+ RLRHK CI +VR  LDD
Sbjct: 227  KNSNNVTPGEKRKHDVLELD--ECGVADEQSVVYRANFEGFIRRLRHKGCIDHVRAHLDD 284

Query: 712  GAGIVLSAMLEATRSKETKVKMENSVPLSMDAIYEEVIKSEAGRSMTLEHVRASLVQLGC 533
            GA  VLSAML+AT S E KVK +NSVPLS+ +IYEEVIKSEAGR+MTL+HVRASLVQLG 
Sbjct: 285  GAANVLSAMLQATSSAEKKVKTKNSVPLSLSSIYEEVIKSEAGRNMTLDHVRASLVQLGE 344

Query: 532  HLPTIGIDETYSIDLKSIIELAQNEEVESIVMKRYGREAYRIFRLLSKAGCLLETDKISD 353
                    ++YSID + IIE+AQNEEVES+V KRYGR+AYRIFRLLSK+G LLETDKISD
Sbjct: 345  LSFVDASSDSYSIDFEKIIEIAQNEEVESVVSKRYGRDAYRIFRLLSKSGRLLETDKISD 404

Query: 352  TTFVDKKNTAKTLYKLWKDDYLHMEKVTTHGGRPSQFSLWKVNKNSLWEHVLDEIYHAAL 173
            TTFV+KK+  K LYKLWKD YL MEK+   G R SQF LWKVN+  LW+HVLDE++HAAL
Sbjct: 405  TTFVEKKDAPKILYKLWKDGYLLMEKLVVTGARQSQFLLWKVNRQILWKHVLDEMFHAAL 464

Query: 172  NLRLRTVYEQEKEKEVFQIPREKLVGELGKRHKRLRKVRMVLESSLMNLDDAIMLFH 2
            NL LR  YE ++EKE+  +P +K  G L  R+ R+RKVR++LESS M LDDAI+LFH
Sbjct: 465  NLSLRVSYELDREKELLNLPADKRTGPLQDRYNRIRKVRILLESSQMKLDDAILLFH 521


>ref|XP_006421933.1| hypothetical protein CICLE_v10004721mg [Citrus clementina]
            gi|568874593|ref|XP_006490399.1| PREDICTED: DNA-directed
            RNA polymerase III subunit RPC3-like isoform X1 [Citrus
            sinensis] gi|557523806|gb|ESR35173.1| hypothetical
            protein CICLE_v10004721mg [Citrus clementina]
            gi|641833010|gb|KDO52033.1| hypothetical protein
            CISIN_1g009725mg [Citrus sinensis]
          Length = 527

 Score =  436 bits (1121), Expect = e-119
 Identities = 238/417 (57%), Positives = 296/417 (70%)
 Frame = -3

Query: 1252 IIEGLIQHGRLSLKQISDRHKDTSNQSEGNCTAQDAVKENFNKLVNARYVERCPAHEPFL 1073
            +++GL++HGRL+LKQ+ DR K  S++ EGN    D+++E   KLV A YVERCPA EP L
Sbjct: 116  LVQGLLEHGRLTLKQMFDRAK--SSEKEGNLVDLDSLRETLVKLVTAHYVERCPASEPLL 173

Query: 1072 APRDXXXXXXXXXXXXXXXXXXELKTLEERALAAAAPMESIRFLVETYNETDVDEENSKE 893
             P                    E +T+E++ + AA PME++RF V T  E+DV E   KE
Sbjct: 174  MPISEEEGPARKKGSKSAKKIGEPETIEQQVVEAALPMEAMRFSVVTNVESDVGE---KE 230

Query: 892  DPSTSVPVGEKRKRGDLESDAVDGNEKTKKEVLWRPNFEEFMWRLRHKACIANVRTRLDD 713
              S +V  GEKRK   LE D  +     ++ V++R NFE F+ RLRHK CI +VR  LDD
Sbjct: 231  KNSNNVTPGEKRKHDVLELD--ECGVADEQSVVYRANFEGFIRRLRHKGCIDHVRAHLDD 288

Query: 712  GAGIVLSAMLEATRSKETKVKMENSVPLSMDAIYEEVIKSEAGRSMTLEHVRASLVQLGC 533
            GA  VLSAML+AT S E KVK +NSVPLS+ +IYEEVIKSEAGR+MTL+HVRASLVQLG 
Sbjct: 289  GAANVLSAMLQATSSAEKKVKTKNSVPLSLSSIYEEVIKSEAGRNMTLDHVRASLVQLGE 348

Query: 532  HLPTIGIDETYSIDLKSIIELAQNEEVESIVMKRYGREAYRIFRLLSKAGCLLETDKISD 353
                    ++YSID + IIE+AQNEEVES+V KRYGR+AYRIFRLLSK+G LLETDKISD
Sbjct: 349  LSFVDASSDSYSIDFEKIIEIAQNEEVESVVSKRYGRDAYRIFRLLSKSGRLLETDKISD 408

Query: 352  TTFVDKKNTAKTLYKLWKDDYLHMEKVTTHGGRPSQFSLWKVNKNSLWEHVLDEIYHAAL 173
            TTFV+KK+  K LYKLWKD YL MEK+   G R SQF LWKVN+  LW+HVLDE++HAAL
Sbjct: 409  TTFVEKKDAPKILYKLWKDGYLLMEKLVVTGARQSQFLLWKVNRQILWKHVLDEMFHAAL 468

Query: 172  NLRLRTVYEQEKEKEVFQIPREKLVGELGKRHKRLRKVRMVLESSLMNLDDAIMLFH 2
            NL LR  YE ++EKE+  +P +K  G L  R+ R+RKVR++LESS M LDDAI+LFH
Sbjct: 469  NLSLRVSYELDREKELLNLPADKRTGPLQDRYNRIRKVRILLESSQMKLDDAILLFH 525


>ref|XP_006490400.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3-like isoform
            X2 [Citrus sinensis] gi|641833009|gb|KDO52032.1|
            hypothetical protein CISIN_1g009725mg [Citrus sinensis]
          Length = 512

 Score =  424 bits (1089), Expect = e-115
 Identities = 234/417 (56%), Positives = 290/417 (69%)
 Frame = -3

Query: 1252 IIEGLIQHGRLSLKQISDRHKDTSNQSEGNCTAQDAVKENFNKLVNARYVERCPAHEPFL 1073
            +++GL++HGRL+LKQ+ DR K  S++ EGN    D+++E   KLV A YVERCPA EP L
Sbjct: 116  LVQGLLEHGRLTLKQMFDRAK--SSEKEGNLVDLDSLRETLVKLVTAHYVERCPASEPLL 173

Query: 1072 APRDXXXXXXXXXXXXXXXXXXELKTLEERALAAAAPMESIRFLVETYNETDVDEENSKE 893
             P                    E +T+E++ + AA PME++RF V T  E+DV E   KE
Sbjct: 174  MPISEEEGPARKKGSKSAKKIGEPETIEQQVVEAALPMEAMRFSVVTNVESDVGE---KE 230

Query: 892  DPSTSVPVGEKRKRGDLESDAVDGNEKTKKEVLWRPNFEEFMWRLRHKACIANVRTRLDD 713
              S +V  GEKRK   LE D  +     ++ V++R NFE F+ RLRHK CI +VR  LDD
Sbjct: 231  KNSNNVTPGEKRKHDVLELD--ECGVADEQSVVYRANFEGFIRRLRHKGCIDHVRAHLDD 288

Query: 712  GAGIVLSAMLEATRSKETKVKMENSVPLSMDAIYEEVIKSEAGRSMTLEHVRASLVQLGC 533
            GA  VLSAML+AT S E KVK +NSVPLS+ +IYEEVIKSEAGR+MTL+HVRASLVQL  
Sbjct: 289  GAANVLSAMLQATSSAEKKVKTKNSVPLSLSSIYEEVIKSEAGRNMTLDHVRASLVQL-- 346

Query: 532  HLPTIGIDETYSIDLKSIIELAQNEEVESIVMKRYGREAYRIFRLLSKAGCLLETDKISD 353
                         D + IIE+AQNEEVES+V KRYGR+AYRIFRLLSK+G LLETDKISD
Sbjct: 347  -------------DFEKIIEIAQNEEVESVVSKRYGRDAYRIFRLLSKSGRLLETDKISD 393

Query: 352  TTFVDKKNTAKTLYKLWKDDYLHMEKVTTHGGRPSQFSLWKVNKNSLWEHVLDEIYHAAL 173
            TTFV+KK+  K LYKLWKD YL MEK+   G R SQF LWKVN+  LW+HVLDE++HAAL
Sbjct: 394  TTFVEKKDAPKILYKLWKDGYLLMEKLVVTGARQSQFLLWKVNRQILWKHVLDEMFHAAL 453

Query: 172  NLRLRTVYEQEKEKEVFQIPREKLVGELGKRHKRLRKVRMVLESSLMNLDDAIMLFH 2
            NL LR  YE ++EKE+  +P +K  G L  R+ R+RKVR++LESS M LDDAI+LFH
Sbjct: 454  NLSLRVSYELDREKELLNLPADKRTGPLQDRYNRIRKVRILLESSQMKLDDAILLFH 510


>ref|XP_012090252.1| PREDICTED: uncharacterized protein LOC105648465 [Jatropha curcas]
            gi|643706139|gb|KDP22271.1| hypothetical protein
            JCGZ_26102 [Jatropha curcas]
          Length = 529

 Score =  412 bits (1059), Expect = e-112
 Identities = 232/420 (55%), Positives = 294/420 (70%), Gaps = 3/420 (0%)
 Frame = -3

Query: 1252 IIEGLIQHGRLSLKQISDRHKDTSNQSEGNCTAQDAVKENFNKLVNARYVERCPAHEPFL 1073
            I+EGL+QHGRL+LKQI DR  + +    GN    DAV+E+  KLV ARYVE CP  EP L
Sbjct: 117  IVEGLLQHGRLTLKQIVDRANNYNKT--GNSIGLDAVQESLRKLVTARYVEHCPIPEPVL 174

Query: 1072 APRDXXXXXXXXXXXXXXXXXXELKTLEERALAAAAPMESIRF-LVETYNETDVDEENSK 896
             P++                  E +TLE+RALAAA PME+ RF LV      D  E++  
Sbjct: 175  EPQNEEDAPAKKRGAKSAKIVVEPETLEQRALAAALPMEAKRFSLVMDIELNDDGEKDQN 234

Query: 895  EDPSTSVPVGEKRKRGDLESDAVDGNEKTKKEV-LWRPNFEEFMWRLRHKACIANVRTRL 719
            + P      G+KRK    E D    +E TK EV LWR NFEEF+ RLRHKAC+ NV+ RL
Sbjct: 235  KSPDKHS--GDKRKLDASEPDI--DSETTKDEVVLWRANFEEFIRRLRHKACVENVKARL 290

Query: 718  DDGAGIVLSAMLEATRSKETKVKMENSVPLSMDAIYEEVIKSEAGRSMTLEHVRASLVQL 539
            DDGA IV+SAMLEA++++E KVK  +SVPLS+++IYEEVIKSE GR+MT +HVRA+LVQL
Sbjct: 291  DDGAAIVVSAMLEASKTEEKKVKTASSVPLSVNSIYEEVIKSEKGRNMTFDHVRAALVQL 350

Query: 538  GCHLPTIGI-DETYSIDLKSIIELAQNEEVESIVMKRYGREAYRIFRLLSKAGCLLETDK 362
                  + + DE+YSID K  IE+AQ++EVESIV+KR+G +AYR+FRLL KAG LLETDK
Sbjct: 351  TSPPSFVRVDDESYSIDFKHTIEVAQSDEVESIVLKRHGTDAYRMFRLLLKAGRLLETDK 410

Query: 361  ISDTTFVDKKNTAKTLYKLWKDDYLHMEKVTTHGGRPSQFSLWKVNKNSLWEHVLDEIYH 182
            I+D  FV+KK+T + LYKLW+DDYL MEK+       + F LWKVNK  LWEHVLDE++H
Sbjct: 411  IADAVFVEKKDTTQILYKLWQDDYLIMEKLI---AGTATFLLWKVNKLVLWEHVLDEMFH 467

Query: 181  AALNLRLRTVYEQEKEKEVFQIPREKLVGELGKRHKRLRKVRMVLESSLMNLDDAIMLFH 2
            AALNL +R  YE E+ KE+  IP +K  G + K++  LRK+R+++ESS MNLDDAIMLFH
Sbjct: 468  AALNLSIRVAYELEQNKEILDIPPDKREGPMQKKYDNLRKMRILMESSQMNLDDAIMLFH 527


>gb|KHG02841.1| DNA-directed RNA polymerase III subunit RPC3 [Gossypium arboreum]
          Length = 513

 Score =  405 bits (1042), Expect = e-110
 Identities = 230/417 (55%), Positives = 280/417 (67%)
 Frame = -3

Query: 1252 IIEGLIQHGRLSLKQISDRHKDTSNQSEGNCTAQDAVKENFNKLVNARYVERCPAHEPFL 1073
            ++EGL+QHGRLSLKQ+ DR K          +  D V+E F KL+NA ++ERCPA EP L
Sbjct: 116  LLEGLLQHGRLSLKQMFDRAK----------SGDDVVQEAFVKLLNAHFIERCPASEPVL 165

Query: 1072 APRDXXXXXXXXXXXXXXXXXXELKTLEERALAAAAPMESIRFLVETYNETDVDEENSKE 893
                                    +TLE+R + AA P E++RFL  T  E   D    K 
Sbjct: 166  TNPTKEEEAARKRAAKSGKILEVQETLEQRVVEAAMPTEALRFLFATETEPTADGGKDKS 225

Query: 892  DPSTSVPVGEKRKRGDLESDAVDGNEKTKKEVLWRPNFEEFMWRLRHKACIANVRTRLDD 713
            + S+SV  GEKRK   LES+A  G    ++ VLWR NF+EF+W LRHKACI NVR R DD
Sbjct: 226  N-SSSVTPGEKRKHDALESEAECG-ATDEQVVLWRANFDEFIWCLRHKACIENVRARFDD 283

Query: 712  GAGIVLSAMLEATRSKETKVKMENSVPLSMDAIYEEVIKSEAGRSMTLEHVRASLVQLGC 533
            GA IV  AMLEATRS E KVK ENSVPLS+ +IYEEVIKSE GR++T + VRASLVQL C
Sbjct: 284  GAVIVFGAMLEATRSAEKKVKTENSVPLSLSSIYEEVIKSEEGRNITFDRVRASLVQLSC 343

Query: 532  HLPTIGIDETYSIDLKSIIELAQNEEVESIVMKRYGREAYRIFRLLSKAGCLLETDKISD 353
                   +E+YS+D K IIELAQNEEVESIV+KRYGR+AYR+FRLLS +G LLETDK++D
Sbjct: 344  PPFVKAANESYSVDFKKIIELAQNEEVESIVLKRYGRDAYRMFRLLSNSGHLLETDKVAD 403

Query: 352  TTFVDKKNTAKTLYKLWKDDYLHMEKVTTHGGRPSQFSLWKVNKNSLWEHVLDEIYHAAL 173
             TFV+KK T   LYKLWKDDYL +EK+   G +   F LWKVNKN+L  HVLDE++HAA 
Sbjct: 404  ATFVEKKETPIILYKLWKDDYLQLEKLQI-GVKQIPFQLWKVNKNTLKVHVLDEMFHAAF 462

Query: 172  NLRLRTVYEQEKEKEVFQIPREKLVGELGKRHKRLRKVRMVLESSLMNLDDAIMLFH 2
            NL  R  +E E+EKE+  + ++       KR  RLRK R++LESS M LDDAIMLFH
Sbjct: 463  NLSQRVAFELEQEKELSNVLQD-------KRVNRLRK-RLLLESSQMKLDDAIMLFH 511