BLASTX nr result
ID: Cornus23_contig00012557
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cornus23_contig00012557
(602 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AIG55302.1| gag-pol, partial [Camellia sinensis] 71 5e-10
emb|CAN76625.1| hypothetical protein VITISV_043730 [Vitis vinifera] 63 1e-07
emb|CAN68184.1| hypothetical protein VITISV_007862 [Vitis vinifera] 62 2e-07
ref|XP_010668234.1| PREDICTED: uncharacterized protein LOC104885... 60 1e-06
ref|XP_008458116.1| PREDICTED: uncharacterized protein LOC103497... 59 2e-06
ref|XP_012439761.1| PREDICTED: uncharacterized protein LOC105765... 59 3e-06
ref|XP_011013173.1| PREDICTED: uncharacterized protein LOC105117... 58 3e-06
gb|AAO45752.1| pol protein [Cucumis melo subsp. melo] 58 3e-06
ref|XP_008368288.1| PREDICTED: uncharacterized protein LOC103431... 58 4e-06
ref|XP_010026793.1| PREDICTED: uncharacterized protein LOC104417... 57 6e-06
ref|XP_010316066.1| PREDICTED: transposon Ty3-G Gag-Pol polyprot... 57 8e-06
ref|XP_010316065.1| PREDICTED: uncharacterized protein LOC101259... 57 8e-06
ref|XP_010316063.1| PREDICTED: uncharacterized protein LOC101259... 57 8e-06
emb|CAN79752.1| hypothetical protein VITISV_041136 [Vitis vinifera] 57 8e-06
emb|CAN77191.1| hypothetical protein VITISV_006389 [Vitis vinifera] 57 1e-05
>gb|AIG55302.1| gag-pol, partial [Camellia sinensis]
Length = 923
Score = 70.9 bits (172), Expect = 5e-10
Identities = 30/38 (78%), Positives = 34/38 (89%)
Frame = +2
Query: 2 VLRGKTIPLVKVLWQHRGIEEATWEREAEIRSKYPALF 115
VLRGKTIPLVKVLW+H G+EEATWERE E+R KYP +F
Sbjct: 883 VLRGKTIPLVKVLWKHHGVEEATWERELEVREKYPDMF 920
>emb|CAN76625.1| hypothetical protein VITISV_043730 [Vitis vinifera]
Length = 757
Score = 63.2 bits (152), Expect = 1e-07
Identities = 27/38 (71%), Positives = 31/38 (81%)
Frame = +2
Query: 2 VLRGKTIPLVKVLWQHRGIEEATWEREAEIRSKYPALF 115
VLR KTIPLVKVLW H G+EE TWE E+++R KYP LF
Sbjct: 715 VLRTKTIPLVKVLWDHHGVEETTWELESDMRKKYPELF 752
>emb|CAN68184.1| hypothetical protein VITISV_007862 [Vitis vinifera]
Length = 506
Score = 62.4 bits (150), Expect = 2e-07
Identities = 27/38 (71%), Positives = 32/38 (84%)
Frame = +2
Query: 2 VLRGKTIPLVKVLWQHRGIEEATWEREAEIRSKYPALF 115
VLR KTIPLVKVLW H G+E ATWE E+++R+KYP LF
Sbjct: 427 VLRTKTIPLVKVLWDHHGVEGATWELESDMRNKYPELF 464
>ref|XP_010668234.1| PREDICTED: uncharacterized protein LOC104885229 [Beta vulgaris subsp.
vulgaris]
Length = 1321
Score = 59.7 bits (143), Expect = 1e-06
Identities = 23/37 (62%), Positives = 34/37 (91%)
Frame = +2
Query: 5 LRGKTIPLVKVLWQHRGIEEATWEREAEIRSKYPALF 115
LRGK+IPL+K+LW++ EEATWE+EA+++++YPALF
Sbjct: 1281 LRGKSIPLLKILWRNHNTEEATWEKEADMKARYPALF 1317
>ref|XP_008458116.1| PREDICTED: uncharacterized protein LOC103497645 [Cucumis melo]
Length = 162
Score = 58.9 bits (141), Expect = 2e-06
Identities = 24/38 (63%), Positives = 32/38 (84%)
Frame = +2
Query: 2 VLRGKTIPLVKVLWQHRGIEEATWEREAEIRSKYPALF 115
+LR + IPLVKVLW+H +EEATWERE ++R++YP LF
Sbjct: 123 MLRNREIPLVKVLWRHHKVEEATWEREDDMRARYPELF 160
>ref|XP_012439761.1| PREDICTED: uncharacterized protein LOC105765293 [Gossypium
raimondii]
Length = 155
Score = 58.5 bits (140), Expect = 3e-06
Identities = 26/40 (65%), Positives = 32/40 (80%)
Frame = +2
Query: 2 VLRGKTIPLVKVLWQHRGIEEATWEREAEIRSKYPALFDS 121
VLR K+IPLVKVLW++ G EEATWE E +R +YP LF+S
Sbjct: 103 VLRRKSIPLVKVLWRNHGTEEATWESEDSMRQQYPQLFES 142
>ref|XP_011013173.1| PREDICTED: uncharacterized protein LOC105117265, partial [Populus
euphratica]
Length = 1348
Score = 58.2 bits (139), Expect = 3e-06
Identities = 24/38 (63%), Positives = 31/38 (81%)
Frame = +2
Query: 5 LRGKTIPLVKVLWQHRGIEEATWEREAEIRSKYPALFD 118
LR K IP+VK+LW++ +EE TWEREAE+R KYP LF+
Sbjct: 1201 LRSKKIPIVKILWRNAQVEEETWEREAEMRKKYPNLFE 1238
>gb|AAO45752.1| pol protein [Cucumis melo subsp. melo]
Length = 923
Score = 58.2 bits (139), Expect = 3e-06
Identities = 25/37 (67%), Positives = 31/37 (83%)
Frame = +2
Query: 5 LRGKTIPLVKVLWQHRGIEEATWEREAEIRSKYPALF 115
LR K IPLVKVLW++ +EEATWERE ++RS+YP LF
Sbjct: 885 LRNKQIPLVKVLWRNHRVEEATWEREDDMRSRYPELF 921
>ref|XP_008368288.1| PREDICTED: uncharacterized protein LOC103431892 [Malus domestica]
Length = 162
Score = 57.8 bits (138), Expect = 4e-06
Identities = 25/38 (65%), Positives = 31/38 (81%)
Frame = +2
Query: 2 VLRGKTIPLVKVLWQHRGIEEATWEREAEIRSKYPALF 115
VLR KTIPLVKVLW++ EEATWE E ++R++YP LF
Sbjct: 124 VLRNKTIPLVKVLWRNHAFEEATWETEEQMRAQYPFLF 161
>ref|XP_010026793.1| PREDICTED: uncharacterized protein LOC104417177 [Eucalyptus grandis]
Length = 1753
Score = 57.4 bits (137), Expect = 6e-06
Identities = 27/40 (67%), Positives = 29/40 (72%)
Frame = +2
Query: 2 VLRGKTIPLVKVLWQHRGIEEATWEREAEIRSKYPALFDS 121
VLR KTIPLVKV+WQH G E ATWE E +R YP LF S
Sbjct: 1409 VLRTKTIPLVKVVWQHHGTEGATWETEDSMRELYPYLFAS 1448
>ref|XP_010316066.1| PREDICTED: transposon Ty3-G Gag-Pol polyprotein isoform X5 [Solanum
lycopersicum]
Length = 391
Score = 57.0 bits (136), Expect = 8e-06
Identities = 26/47 (55%), Positives = 34/47 (72%)
Frame = +2
Query: 5 LRGKTIPLVKVLWQHRGIEEATWEREAEIRSKYPALFDS*SSGMSIS 145
LR + IP+VKV W+HR +EEATWE E E+R ++P LF+ SG S S
Sbjct: 344 LRSRAIPIVKVRWRHRSVEEATWETEQEMREQFPGLFE--PSGPSTS 388
>ref|XP_010316065.1| PREDICTED: uncharacterized protein LOC101259997 isoform X2 [Solanum
lycopersicum]
Length = 665
Score = 57.0 bits (136), Expect = 8e-06
Identities = 26/47 (55%), Positives = 34/47 (72%)
Frame = +2
Query: 5 LRGKTIPLVKVLWQHRGIEEATWEREAEIRSKYPALFDS*SSGMSIS 145
LR + IP+VKV W+HR +EEATWE E E+R ++P LF+ SG S S
Sbjct: 618 LRSRAIPIVKVRWRHRSVEEATWETEQEMREQFPGLFE--PSGPSTS 662
>ref|XP_010316063.1| PREDICTED: uncharacterized protein LOC101259997 isoform X1 [Solanum
lycopersicum]
Length = 666
Score = 57.0 bits (136), Expect = 8e-06
Identities = 26/47 (55%), Positives = 34/47 (72%)
Frame = +2
Query: 5 LRGKTIPLVKVLWQHRGIEEATWEREAEIRSKYPALFDS*SSGMSIS 145
LR + IP+VKV W+HR +EEATWE E E+R ++P LF+ SG S S
Sbjct: 619 LRSRAIPIVKVRWRHRSVEEATWETEQEMREQFPGLFE--PSGPSTS 663
>emb|CAN79752.1| hypothetical protein VITISV_041136 [Vitis vinifera]
Length = 377
Score = 57.0 bits (136), Expect = 8e-06
Identities = 25/36 (69%), Positives = 27/36 (75%)
Frame = +2
Query: 8 RGKTIPLVKVLWQHRGIEEATWEREAEIRSKYPALF 115
R K IP+VKV WQH GIEEATWE E E+R YP LF
Sbjct: 339 RNKVIPVVKVWWQHHGIEEATWEPEEEMRRHYPQLF 374
>emb|CAN77191.1| hypothetical protein VITISV_006389 [Vitis vinifera]
Length = 1387
Score = 56.6 bits (135), Expect = 1e-05
Identities = 25/36 (69%), Positives = 26/36 (72%)
Frame = +2
Query: 8 RGKTIPLVKVLWQHRGIEEATWEREAEIRSKYPALF 115
R K IP VKV WQH GIEEATWE E E+R YP LF
Sbjct: 1349 RNKVIPXVKVXWQHHGIEEATWELEEEMRRHYPQLF 1384