BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00012434
         (323 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_005855606.1| transcript antisense to ribosomal rna protei...    62   2e-07

>ref|XP_005855606.1| transcript antisense to ribosomal rna protein [Nannochloropsis
           gaditana CCMP526] gi|422293454|gb|EKU20754.1| transcript
           antisense to ribosomal rna protein [Nannochloropsis
           gaditana CCMP526]
          Length = 154

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 46/109 (42%), Positives = 58/109 (53%), Gaps = 4/109 (3%)
 Frame = +2

Query: 2   SRYLFAIGLMSVFRVRRNIPPTSNSTLKLLNSIIRILFRIFLPYPYGTLTLYGIPFQ--- 172
           SRYLFAIGL  +F +R N+PP  +   K L+S  +   R      YGT+TL+G  FQ   
Sbjct: 43  SRYLFAIGLPPIFSLRWNLPPALSCNPKQLDS-SKTRRRRTHASMYGTVTLWGALFQGTC 101

Query: 173 -KILNKGILIDSIKIPQVQ*SFQYRIQDALFPLHSQLLKQSLLVSFPPL 316
               +  + +D    P     FQ      LFPLHS LL +S LVSFPPL
Sbjct: 102 LASADGCVSLDYNSEPYNDPDFQVE----LFPLHSPLLGESWLVSFPPL 146