BLASTX nr result

ID: Cornus23_contig00012393 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00012393
         (641 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AGC78907.1| hypothetical protein (mitochondrion) [Vicia faba]...   152   1e-34
gb|AGC78906.1| hypothetical protein (mitochondrion) [Vicia faba]...   129   1e-27
ref|XP_002535140.1| conserved hypothetical protein [Ricinus comm...    83   8e-24
emb|CDY65733.1| BnaCnng48520D [Brassica napus]                         90   7e-21
gb|KCW56098.1| hypothetical protein EUGRSUZ_I01851 [Eucalyptus g...   104   5e-20
emb|CBI31105.3| unnamed protein product [Vitis vinifera]               66   3e-15
ref|XP_010107039.1| NADH dehydrogenase [ubiquinone] iron-sulfur ...    86   2e-14
ref|XP_012575409.1| PREDICTED: uncharacterized protein LOC105852...    80   8e-13
gb|ABA97927.1| hypothetical protein LOC_Os12g23620 [Oryza sativa...    62   4e-07

>gb|AGC78907.1| hypothetical protein (mitochondrion) [Vicia faba]
           gi|442803201|gb|AGC78936.1| hypothetical protein
           (mitochondrion) [Vicia faba] gi|442803286|gb|AGC79021.1|
           hypothetical protein (mitochondrion) [Vicia faba]
          Length = 116

 Score =  152 bits (385), Expect = 1e-34
 Identities = 84/100 (84%), Positives = 87/100 (87%)
 Frame = +3

Query: 63  MTNRVRHLATSARKRNVVLVEAFFPLLVKGARDVRGVRAFRTTTRMVVLGRIPLLNIRDR 242
           MTNRVRHLA SARKRNVVLVEA FPLLV GARDVRGVRAFRTTT +VVLGRIPLLNIRDR
Sbjct: 1   MTNRVRHLAKSARKRNVVLVEALFPLLVLGARDVRGVRAFRTTTGLVVLGRIPLLNIRDR 60

Query: 243 WPGLSYQKGRRKRTRPPISFDVPGQGPARFDRLLDNKKAS 362
             GLSYQKG +KRTR PISFDVP   PARFD L DNKKA+
Sbjct: 61  -GGLSYQKGCKKRTRLPISFDVP---PARFDLLFDNKKAA 96


>gb|AGC78906.1| hypothetical protein (mitochondrion) [Vicia faba]
           gi|442803202|gb|AGC78937.1| hypothetical protein
           (mitochondrion) [Vicia faba] gi|442803285|gb|AGC79020.1|
           hypothetical protein (mitochondrion) [Vicia faba]
          Length = 111

 Score =  129 bits (324), Expect = 1e-27
 Identities = 66/77 (85%), Positives = 68/77 (88%)
 Frame = -2

Query: 232 MFRSGIRPRTTILVVVRKARTPRTSRAPFTNKGKKASTRTTFLLRADVAKCLTLLVIVSC 53
           MFRSGIRPRTT  VVVRKARTPRTSRAP TNKG KASTRTTFLLRAD+AKCLTLLVIV C
Sbjct: 1   MFRSGIRPRTTSPVVVRKARTPRTSRAPKTNKGNKASTRTTFLLRADLAKCLTLLVIVPC 60

Query: 52  CCGRCSFARA*TTPTNK 2
           CCG+CSFAR    PTNK
Sbjct: 61  CCGQCSFAR---NPTNK 74


>ref|XP_002535140.1| conserved hypothetical protein [Ricinus communis]
           gi|223523945|gb|EEF27246.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 114

 Score = 83.2 bits (204), Expect(2) = 8e-24
 Identities = 51/104 (49%), Positives = 54/104 (51%)
 Frame = -1

Query: 455 VGRGSLKKRRAVGHVTCTELVADWAFSLIKAARLLVIQKSVESGGPLPRNVE*NRWPGSL 276
           V   S  + RAVGHV CTELVADWAFS IKA +L  +     S    P     N   G  
Sbjct: 29  VEEASKSEGRAVGHVICTELVADWAFSWIKADQLAFLLSKSRSNRAGPCLRTSNEIGGR- 87

Query: 275 STTLLI**ARPPIPYV*ERDPPKNDHSCGGTEGTDSANVPRPLY 144
                             RD PKND SCGGTEGTDSANVPRPLY
Sbjct: 88  -----------------GRDSPKNDQSCGGTEGTDSANVPRPLY 114



 Score = 54.7 bits (130), Expect(2) = 8e-24
 Identities = 23/23 (100%), Positives = 23/23 (100%)
 Frame = -3

Query: 570 MSSPGWSTVRQNRHRLGAIDGTW 502
           MSSPGWSTVRQNRHRLGAIDGTW
Sbjct: 1   MSSPGWSTVRQNRHRLGAIDGTW 23



 Score = 63.2 bits (152), Expect = 1e-07
 Identities = 39/66 (59%), Positives = 43/66 (65%), Gaps = 5/66 (7%)
 Frame = -2

Query: 466 HIEMWVEEASKSDEL*V-----T*PAPSWWLTGLFP*SKPLAFLLSKSRSNRAGPCPGTS 302
           HIEMWVEEASKS+   V     T     W  + +   +  LAFLLSKSRSNRAGPC  TS
Sbjct: 24  HIEMWVEEASKSEGRAVGHVICTELVADWAFSWIK--ADQLAFLLSKSRSNRAGPCLRTS 81

Query: 301 NEIGGR 284
           NEIGGR
Sbjct: 82  NEIGGR 87


>emb|CDY65733.1| BnaCnng48520D [Brassica napus]
          Length = 625

 Score = 89.7 bits (221), Expect(2) = 7e-21
 Identities = 65/151 (43%), Positives = 69/151 (45%)
 Frame = -1

Query: 602 SPLASGHVGTA*VHRGGARSAKIGIG*VLLMEHGKPIFLHMEVLRAHRDVGRGSLKKRRA 423
           SPLASGHVGTA VHR                EH     L M V  A +  GR       A
Sbjct: 324 SPLASGHVGTARVHR--------------CCEH-----LEMRVEEASKSEGR-------A 357

Query: 422 VGHVTCTELVADWAFSLIKAARLLVIQKSVESGGPLPRNVE*NRWPGSLSTTLLI**ARP 243
           VGHVTCTELVADWAFSLIKA +L     +V+                             
Sbjct: 358 VGHVTCTELVADWAFSLIKADQLAFFLGAVK----------------------------- 388

Query: 242 PIPYV*ERDPPKNDHSCGGTEGTDSANVPRP 150
                     PKND SCGGTEGTDSANVPRP
Sbjct: 389 ----------PKNDQSCGGTEGTDSANVPRP 409



 Score = 38.1 bits (87), Expect(2) = 7e-21
 Identities = 18/20 (90%), Positives = 18/20 (90%)
 Frame = -3

Query: 60  FPAVAAGARLRAREPPQQTR 1
           FPAVAAGARLRAREP QQ R
Sbjct: 413 FPAVAAGARLRAREPTQQRR 432


>gb|KCW56098.1| hypothetical protein EUGRSUZ_I01851 [Eucalyptus grandis]
          Length = 117

 Score =  104 bits (259), Expect = 5e-20
 Identities = 67/124 (54%), Positives = 73/124 (58%), Gaps = 5/124 (4%)
 Frame = -2

Query: 505 MVSLSFSIWKCCGHIEMWVEEASKSDEL*V-----T*PAPSWWLTGLFP*SKPLAFLLSK 341
           MVSLSFSIW C GHIEMWVEEASKS+   V     T     W  + +   +  LAF LSK
Sbjct: 1   MVSLSFSIWTCRGHIEMWVEEASKSEGRAVGHVTCTELVADWAFSLIK--ADQLAFFLSK 58

Query: 340 SRSNRAGPCPGTSNEIGGRVLFLRPF*YDRPGHLSLMFRSGIRPRTTILVVVRKARTPRT 161
           S+SNRA PCP                       L  +FRSGIRPRTT LVVVRKARTPRT
Sbjct: 59  SQSNRAAPCP-----------------------LFQLFRSGIRPRTTSLVVVRKARTPRT 95

Query: 160 SRAP 149
           SRAP
Sbjct: 96  SRAP 99



 Score = 66.2 bits (160), Expect = 1e-08
 Identities = 50/125 (40%), Positives = 60/125 (48%), Gaps = 2/125 (1%)
 Frame = -1

Query: 455 VGRGSLKKRRAVGHVTCTELVADWAFSLIKAARLLVIQKSVESG--GPLPRNVE*NRWPG 282
           V   S  + RAVGHVTCTELVADWAFSLIKA +L       +S    P P          
Sbjct: 19  VEEASKSEGRAVGHVTCTELVADWAFSLIKADQLAFFLSKSQSNRAAPCPLFQLFRSGIR 78

Query: 281 SLSTTLLI**ARPPIPYV*ERDPPKNDHSCGGTEGTDSANVPRPLY**GKESLNQNHIPF 102
             +T+L++         V +   P+   +              PL    KESLNQNHIPF
Sbjct: 79  PRTTSLVV---------VRKARTPRTSRA--------------PLR---KESLNQNHIPF 112

Query: 101 ACGCS 87
           ACGCS
Sbjct: 113 ACGCS 117


>emb|CBI31105.3| unnamed protein product [Vitis vinifera]
          Length = 765

 Score = 66.2 bits (160), Expect(2) = 3e-15
 Identities = 27/30 (90%), Positives = 28/30 (93%)
 Frame = -3

Query: 249 PATYPLCLGAGSAQERPFLWWYGRHGLRER 160
           P+ YPLCLGAGSAQERP LWWYGRHGLRER
Sbjct: 186 PSPYPLCLGAGSAQERPVLWWYGRHGLRER 215



 Score = 42.7 bits (99), Expect(2) = 3e-15
 Identities = 21/35 (60%), Positives = 22/35 (62%)
 Frame = -1

Query: 416 HVTCTELVADWAFSLIKAARLLVIQKSVESGGPLP 312
           HVTCTELVADWAFSLIKA  L  +     S    P
Sbjct: 152 HVTCTELVADWAFSLIKADPLAFLLSKSRSNRACP 186


>ref|XP_010107039.1| NADH dehydrogenase [ubiquinone] iron-sulfur protein 2 [Morus
           notabilis] gi|587926104|gb|EXC13351.1| NADH
           dehydrogenase [ubiquinone] iron-sulfur protein 2 [Morus
           notabilis]
          Length = 275

 Score = 85.9 bits (211), Expect = 2e-14
 Identities = 40/44 (90%), Positives = 40/44 (90%)
 Frame = -3

Query: 633 MVLVLRTVNGFASGLWARRNRMSSPGWSTVRQNRHRLGAIDGTW 502
           MVLV RTVNGFASGLWA RNRMSSPGWSTV QNRHRLG IDGTW
Sbjct: 1   MVLVRRTVNGFASGLWACRNRMSSPGWSTVCQNRHRLGTIDGTW 44


>ref|XP_012575409.1| PREDICTED: uncharacterized protein LOC105852994 [Cicer arietinum]
          Length = 385

 Score = 80.5 bits (197), Expect = 8e-13
 Identities = 41/57 (71%), Positives = 44/57 (77%)
 Frame = -3

Query: 633 MVLVLRTVNGFASGLWARRNRMSSPGWSTVRQNRHRLGAIDGTW*AYLSPYGSAAGT 463
           M LVL+TVNGFASGL  R NRMSS GWSTVRQNRHRLGAIDGTW    +   + AGT
Sbjct: 1   MALVLQTVNGFASGLGERWNRMSSLGWSTVRQNRHRLGAIDGTWLIPFNYVAALAGT 57


>gb|ABA97927.1| hypothetical protein LOC_Os12g23620 [Oryza sativa Japonica Group]
          Length = 111

 Score = 61.6 bits (148), Expect = 4e-07
 Identities = 38/65 (58%), Positives = 43/65 (66%)
 Frame = -1

Query: 197 SCGGTEGTDSANVPRPLY**GKESLNQNHIPFACGCS*VSDSIGHSFLLLRPVLVCARVN 18
           +CGG EGTDSA+VP PL    K+ LN   I        VSDSIGHS LLLRPVLVCARV 
Sbjct: 45  TCGGMEGTDSASVPHPLR---KKLLNHYKIKKYDA---VSDSIGHSSLLLRPVLVCARVT 98

Query: 17  HPNKQ 3
             +K+
Sbjct: 99  AIHKR 103


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