BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00012331
         (1951 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16283.3| unnamed protein product [Vitis vinifera]              715   0.0  
ref|XP_002284994.1| PREDICTED: general transcription factor IIH ...   711   0.0  
ref|XP_010104122.1| General transcription factor IIH subunit 2 [...   679   0.0  
emb|CDP13112.1| unnamed protein product [Coffea canephora]            676   0.0  
ref|XP_010257340.1| PREDICTED: general transcription factor IIH ...   673   0.0  
gb|AIU50497.1| GTF2H2, partial [Vitis vinifera]                       672   0.0  
ref|XP_008225258.1| PREDICTED: general transcription factor IIH ...   671   0.0  
ref|XP_009630848.1| PREDICTED: general transcription factor IIH ...   670   0.0  
ref|XP_007205253.1| hypothetical protein PRUPE_ppa006259mg [Prun...   668   0.0  
ref|XP_010032024.1| PREDICTED: general transcription factor IIH ...   667   0.0  
ref|XP_009777720.1| PREDICTED: general transcription factor IIH ...   666   0.0  
gb|AIU50471.1| GTF2H2, partial [Buxus sinica]                         665   0.0  
ref|XP_004309875.1| PREDICTED: general transcription factor IIH ...   665   0.0  
ref|XP_009338275.1| PREDICTED: general transcription factor IIH ...   664   0.0  
ref|XP_008467294.1| PREDICTED: general transcription factor IIH ...   663   0.0  
ref|XP_008358377.1| PREDICTED: LOW QUALITY PROTEIN: general tran...   663   0.0  
ref|XP_004143721.1| PREDICTED: general transcription factor IIH ...   662   0.0  
ref|XP_007015448.1| General transcription factor II H2 isoform 1...   660   0.0  
gb|AIU50456.1| GTF2H2, partial [Magnolia denudata]                    659   0.0  
ref|XP_004237420.1| PREDICTED: general transcription factor IIH ...   659   0.0  

>emb|CBI16283.3| unnamed protein product [Vitis vinifera]
          Length = 494

 Score =  715 bits (1845), Expect = 0.0
 Identities = 350/456 (76%), Positives = 384/456 (84%)
 Frame = -2

Query: 1758 PRLEATLF*TYLSGLKLRLARNMNHIQHREFNNGEGRQFNRSVXXXXXXXXXXENGRGLE 1579
            PR +   F   + G  L +  +MN ++HR+ N+GEGR+ +              NGRGL+
Sbjct: 40   PRPKPYAFIHSILGFSLFIYTSMNDMEHRKTNDGEGRRLDGE-EEEEEEDEDEGNGRGLD 98

Query: 1578 AWERAYADERSWESLQEDESGLLRPIDNKILYHAQYXXXXXXXXXXXXXXRIQKGLIRYL 1399
            AWERAYADERSWESLQEDESGLLRPIDNK +YHAQY              RIQKGLIRYL
Sbjct: 99   AWERAYADERSWESLQEDESGLLRPIDNKTIYHAQYRRRIRSLYSSTTTARIQKGLIRYL 158

Query: 1398 YIVADFSRAAAEMDFRPSRMAVVAKQIETFIREFFDQNPLSQIGLVTIKEGVAQFLTDLG 1219
            YIV D SRAA+EMDF+PSRMAVVAK IE FIREFFDQNPLSQIGLVTIK+G+AQ LTDLG
Sbjct: 159  YIVVDLSRAASEMDFKPSRMAVVAKHIEAFIREFFDQNPLSQIGLVTIKDGLAQCLTDLG 218

Query: 1218 GSPESHIKALTGKLECSGDSSLQNALELVHDNLNQIPSYGHREVLIFYSSLSTCDPGDIL 1039
            GSP+SH+KAL GKLECSGDSSLQNAL+LVH  LNQIPSYGHREVLI YS+LSTCDPGDI+
Sbjct: 219  GSPDSHVKALMGKLECSGDSSLQNALDLVHGYLNQIPSYGHREVLILYSALSTCDPGDIM 278

Query: 1038 ETIQKCKKSKIRCSVIGLSAELFICKHLCQETGGSYSVALDESHLKELVLEHAPPPPAIS 859
            ETIQ+CKKSKIRCSVIGLSAE+FIC+HLCQETGGSYSVALDESH KEL+LEHAPPPPAI+
Sbjct: 279  ETIQECKKSKIRCSVIGLSAEIFICRHLCQETGGSYSVALDESHFKELLLEHAPPPPAIA 338

Query: 858  EFAIANLIKMGFPQRAAEGVVSICSCHKEAKVGGGYACPRCKARVCELPTECRICGLTLI 679
            EFAIANLIKMGFPQRAAEGV+SICSCHKEAKVGGGY CPRCKARVCELPTECRICGLTL+
Sbjct: 339  EFAIANLIKMGFPQRAAEGVISICSCHKEAKVGGGYTCPRCKARVCELPTECRICGLTLV 398

Query: 678  SSPHLARSYHHLFPIRLFDEVAPSLLNISHNRLPKNCFGCQQSLLNPGNQSSLSVACPKC 499
            SSPHLARSYHHLFPI  FDEV+ SLLN  H R  + CFGCQ+SLL PGN+ +L VACPKC
Sbjct: 399  SSPHLARSYHHLFPIPPFDEVSLSLLNNPHQRSSRACFGCQESLLIPGNKPTLCVACPKC 458

Query: 498  KQHFCLDCDIYIHESLHNCPGCESSRHPKLVSADEE 391
            KQHFCLDCDIYIHESLHNCPGCES RH K+VS  EE
Sbjct: 459  KQHFCLDCDIYIHESLHNCPGCESFRHSKIVSVTEE 494


>ref|XP_002284994.1| PREDICTED: general transcription factor IIH subunit 2 [Vitis
            vinifera] gi|731392554|ref|XP_010651135.1| PREDICTED:
            general transcription factor IIH subunit 2 [Vitis
            vinifera] gi|731392556|ref|XP_010651136.1| PREDICTED:
            general transcription factor IIH subunit 2 [Vitis
            vinifera]
          Length = 433

 Score =  711 bits (1834), Expect = 0.0
 Identities = 345/434 (79%), Positives = 375/434 (86%)
 Frame = -2

Query: 1692 MNHIQHREFNNGEGRQFNRSVXXXXXXXXXXENGRGLEAWERAYADERSWESLQEDESGL 1513
            MN ++HR+ N+GEGR+ +              NGRGL+AWERAYADERSWESLQEDESGL
Sbjct: 1    MNDMEHRKTNDGEGRRLDGE-EEEEEEDEDEGNGRGLDAWERAYADERSWESLQEDESGL 59

Query: 1512 LRPIDNKILYHAQYXXXXXXXXXXXXXXRIQKGLIRYLYIVADFSRAAAEMDFRPSRMAV 1333
            LRPIDNK +YHAQY              RIQKGLIRYLYIV D SRAA+EMDF+PSRMAV
Sbjct: 60   LRPIDNKTIYHAQYRRRIRSLYSSTTTARIQKGLIRYLYIVVDLSRAASEMDFKPSRMAV 119

Query: 1332 VAKQIETFIREFFDQNPLSQIGLVTIKEGVAQFLTDLGGSPESHIKALTGKLECSGDSSL 1153
            VAK IE FIREFFDQNPLSQIGLVTIK+G+AQ LTDLGGSP+SH+KAL GKLECSGDSSL
Sbjct: 120  VAKHIEAFIREFFDQNPLSQIGLVTIKDGLAQCLTDLGGSPDSHVKALMGKLECSGDSSL 179

Query: 1152 QNALELVHDNLNQIPSYGHREVLIFYSSLSTCDPGDILETIQKCKKSKIRCSVIGLSAEL 973
            QNAL+LVH  LNQIPSYGHREVLI YS+LSTCDPGDI+ETIQ+CKKSKIRCSVIGLSAE+
Sbjct: 180  QNALDLVHGYLNQIPSYGHREVLILYSALSTCDPGDIMETIQECKKSKIRCSVIGLSAEI 239

Query: 972  FICKHLCQETGGSYSVALDESHLKELVLEHAPPPPAISEFAIANLIKMGFPQRAAEGVVS 793
            FIC+HLCQETGGSYSVALDESH KEL+LEHAPPPPAI+EFAIANLIKMGFPQRAAEGV+S
Sbjct: 240  FICRHLCQETGGSYSVALDESHFKELLLEHAPPPPAIAEFAIANLIKMGFPQRAAEGVIS 299

Query: 792  ICSCHKEAKVGGGYACPRCKARVCELPTECRICGLTLISSPHLARSYHHLFPIRLFDEVA 613
            ICSCHKEAKVGGGY CPRCKARVCELPTECRICGLTL+SSPHLARSYHHLFPI  FDEV+
Sbjct: 300  ICSCHKEAKVGGGYTCPRCKARVCELPTECRICGLTLVSSPHLARSYHHLFPIPPFDEVS 359

Query: 612  PSLLNISHNRLPKNCFGCQQSLLNPGNQSSLSVACPKCKQHFCLDCDIYIHESLHNCPGC 433
             SLLN  H R  + CFGCQ+SLL PGN+ +L VACPKCKQHFCLDCDIYIHESLHNCPGC
Sbjct: 360  LSLLNNPHQRSSRACFGCQESLLIPGNKPTLCVACPKCKQHFCLDCDIYIHESLHNCPGC 419

Query: 432  ESSRHPKLVSADEE 391
            ES RH K+VS  EE
Sbjct: 420  ESFRHSKIVSVTEE 433


>ref|XP_010104122.1| General transcription factor IIH subunit 2 [Morus notabilis]
            gi|587910692|gb|EXB98563.1| General transcription factor
            IIH subunit 2 [Morus notabilis]
          Length = 423

 Score =  679 bits (1753), Expect = 0.0
 Identities = 328/425 (77%), Positives = 358/425 (84%)
 Frame = -2

Query: 1665 NNGEGRQFNRSVXXXXXXXXXXENGRGLEAWERAYADERSWESLQEDESGLLRPIDNKIL 1486
            NNGE R+ N +            NGRGLEAWER YADERSWESLQEDESGLLRPIDNK  
Sbjct: 3    NNGEERRLNGAAEDDDDDEDDDGNGRGLEAWERTYADERSWESLQEDESGLLRPIDNKTF 62

Query: 1485 YHAQYXXXXXXXXXXXXXXRIQKGLIRYLYIVADFSRAAAEMDFRPSRMAVVAKQIETFI 1306
            YHAQY               IQKGLIRYL++V D S+AAAEMDFRPSRMAVVAK +E FI
Sbjct: 63   YHAQYRRRLRSASAVR----IQKGLIRYLFLVIDLSKAAAEMDFRPSRMAVVAKHVEAFI 118

Query: 1305 REFFDQNPLSQIGLVTIKEGVAQFLTDLGGSPESHIKALTGKLECSGDSSLQNALELVHD 1126
            REFFDQNPLSQ+GLVTIK+GVA  LTDLGGSPESH+K+L GKLECSG+SS+QNAL+LVHD
Sbjct: 119  REFFDQNPLSQVGLVTIKDGVAHCLTDLGGSPESHVKSLMGKLECSGESSIQNALDLVHD 178

Query: 1125 NLNQIPSYGHREVLIFYSSLSTCDPGDILETIQKCKKSKIRCSVIGLSAELFICKHLCQE 946
             LNQIPSYGHREVLIFYS+LSTCDPGDI+ETIQKCKKSKIRCSVIGLSAE+FICKHLCQE
Sbjct: 179  YLNQIPSYGHREVLIFYSALSTCDPGDIMETIQKCKKSKIRCSVIGLSAEIFICKHLCQE 238

Query: 945  TGGSYSVALDESHLKELVLEHAPPPPAISEFAIANLIKMGFPQRAAEGVVSICSCHKEAK 766
            TGGSYSVALDESH KEL+LEHAPPPPAI+E+AIANLIKMGFPQRAAE  ++ICSCHKEAK
Sbjct: 239  TGGSYSVALDESHFKELILEHAPPPPAIAEYAIANLIKMGFPQRAAESSIAICSCHKEAK 298

Query: 765  VGGGYACPRCKARVCELPTECRICGLTLISSPHLARSYHHLFPIRLFDEVAPSLLNISHN 586
             GGGY CPRCKARVCELPTEC+ CGLTLISSPHLARSYHHLFPI  FDE++ SLL+  H 
Sbjct: 299  AGGGYTCPRCKARVCELPTECQTCGLTLISSPHLARSYHHLFPIVPFDEMSTSLLSDPHR 358

Query: 585  RLPKNCFGCQQSLLNPGNQSSLSVACPKCKQHFCLDCDIYIHESLHNCPGCESSRHPKLV 406
            +L K CFGCQQSLL  GN+    V+CPKCK  FCLDCDIYIHESLHNCPGCES+RH K V
Sbjct: 359  KLSKACFGCQQSLLGFGNKPGPRVSCPKCKHQFCLDCDIYIHESLHNCPGCESARHSKPV 418

Query: 405  SADEE 391
            +  EE
Sbjct: 419  AMSEE 423


>emb|CDP13112.1| unnamed protein product [Coffea canephora]
          Length = 424

 Score =  676 bits (1744), Expect = 0.0
 Identities = 332/424 (78%), Positives = 360/424 (84%)
 Frame = -2

Query: 1662 NGEGRQFNRSVXXXXXXXXXXENGRGLEAWERAYADERSWESLQEDESGLLRPIDNKILY 1483
            NGEGR+ NR            E+GRG +AWERAYADERSWESLQEDESGLLRPIDNK L+
Sbjct: 7    NGEGRKLNRG-EEEEEEDEDEESGRGRDAWERAYADERSWESLQEDESGLLRPIDNKALH 65

Query: 1482 HAQYXXXXXXXXXXXXXXRIQKGLIRYLYIVADFSRAAAEMDFRPSRMAVVAKQIETFIR 1303
            HAQY               IQKGLIRYLYIV D SRAA EMD++PSRM VVA+Q+E FIR
Sbjct: 66   HAQYRRRLRTATTAG----IQKGLIRYLYIVIDLSRAAGEMDYKPSRMVVVARQVEAFIR 121

Query: 1302 EFFDQNPLSQIGLVTIKEGVAQFLTDLGGSPESHIKALTGKLECSGDSSLQNALELVHDN 1123
            EFFDQNPLSQIGLVT+K+GVAQ LTDLGGSPESHIKAL GKLECSGDSSLQN L+LVHD 
Sbjct: 122  EFFDQNPLSQIGLVTLKDGVAQCLTDLGGSPESHIKALMGKLECSGDSSLQNGLDLVHDL 181

Query: 1122 LNQIPSYGHREVLIFYSSLSTCDPGDILETIQKCKKSKIRCSVIGLSAELFICKHLCQET 943
            LNQIPSYGHREVLI YS+LSTCDPGDI+ETIQKCK +KIRCS++GLSAEL+ICK+LCQET
Sbjct: 182  LNQIPSYGHREVLILYSALSTCDPGDIMETIQKCKGAKIRCSIVGLSAELYICKYLCQET 241

Query: 942  GGSYSVALDESHLKELVLEHAPPPPAISEFAIANLIKMGFPQRAAEGVVSICSCHKEAKV 763
            GG YSVALDE HLKELVLEHAPPPPAI+EFAIANLIKMGFPQRAAEGV+SICSCHKEAK 
Sbjct: 242  GGLYSVALDEPHLKELVLEHAPPPPAIAEFAIANLIKMGFPQRAAEGVISICSCHKEAKF 301

Query: 762  GGGYACPRCKARVCELPTECRICGLTLISSPHLARSYHHLFPIRLFDEVAPSLLNISHNR 583
            GGGY CPRCKARVCELPTECRICGLTL+SSPHLARSYHHLFPI  FD+V+PS+ NI   +
Sbjct: 302  GGGYTCPRCKARVCELPTECRICGLTLVSSPHLARSYHHLFPITPFDDVSPSITNIP-QK 360

Query: 582  LPKNCFGCQQSLLNPGNQSSLSVACPKCKQHFCLDCDIYIHESLHNCPGCESSRHPKLVS 403
            LPK+CFGCQQSLLNPGN     VACPKCKQHFCLDCDIYIHESL NCPGCES +    V+
Sbjct: 361  LPKSCFGCQQSLLNPGNLPGPCVACPKCKQHFCLDCDIYIHESLQNCPGCESFKQSNSVT 420

Query: 402  ADEE 391
              EE
Sbjct: 421  NMEE 424


>ref|XP_010257340.1| PREDICTED: general transcription factor IIH subunit 2 [Nelumbo
            nucifera] gi|720004478|ref|XP_010257341.1| PREDICTED:
            general transcription factor IIH subunit 2 [Nelumbo
            nucifera] gi|720004481|ref|XP_010257342.1| PREDICTED:
            general transcription factor IIH subunit 2 [Nelumbo
            nucifera] gi|720004485|ref|XP_010257343.1| PREDICTED:
            general transcription factor IIH subunit 2 [Nelumbo
            nucifera] gi|720004488|ref|XP_010257344.1| PREDICTED:
            general transcription factor IIH subunit 2 [Nelumbo
            nucifera] gi|720004491|ref|XP_010257346.1| PREDICTED:
            general transcription factor IIH subunit 2 [Nelumbo
            nucifera]
          Length = 433

 Score =  673 bits (1737), Expect = 0.0
 Identities = 322/392 (82%), Positives = 348/392 (88%)
 Frame = -2

Query: 1596 NGRGLEAWERAYADERSWESLQEDESGLLRPIDNKILYHAQYXXXXXXXXXXXXXXRIQK 1417
            NGRG+ AWERAYADERSWE+LQEDESG+L  IDNK+L+HAQY              RIQK
Sbjct: 38   NGRGMAAWERAYADERSWENLQEDESGILHAIDNKVLHHAQYRRRIRSLFSSATTSRIQK 97

Query: 1416 GLIRYLYIVADFSRAAAEMDFRPSRMAVVAKQIETFIREFFDQNPLSQIGLVTIKEGVAQ 1237
            GLIRYLYIV D SRAA+EMDFRPSRMAVVAK +E FIREFFDQNPLS IGLVTIK+GVAQ
Sbjct: 98   GLIRYLYIVIDLSRAASEMDFRPSRMAVVAKHVEAFIREFFDQNPLSHIGLVTIKDGVAQ 157

Query: 1236 FLTDLGGSPESHIKALTGKLECSGDSSLQNALELVHDNLNQIPSYGHREVLIFYSSLSTC 1057
             LTDLGGSP+SHIKAL GKLECSGDSSLQNAL+LVH  LNQIPSYGHREVLI YS+LSTC
Sbjct: 158  CLTDLGGSPDSHIKALMGKLECSGDSSLQNALDLVHGYLNQIPSYGHREVLILYSALSTC 217

Query: 1056 DPGDILETIQKCKKSKIRCSVIGLSAELFICKHLCQETGGSYSVALDESHLKELVLEHAP 877
            DPGDI+ETIQKCKKSKIRCSV+GLSAE++ICKHLCQETGGSY+VALDESH KEL+LEHAP
Sbjct: 218  DPGDIMETIQKCKKSKIRCSVVGLSAEIYICKHLCQETGGSYTVALDESHFKELLLEHAP 277

Query: 876  PPPAISEFAIANLIKMGFPQRAAEGVVSICSCHKEAKVGGGYACPRCKARVCELPTECRI 697
            PPPAI+EFAIANLIKMGFPQRAAEGVVSICSCHKEAKVGGGY CPRCKARVCELP EC+I
Sbjct: 278  PPPAIAEFAIANLIKMGFPQRAAEGVVSICSCHKEAKVGGGYTCPRCKARVCELPIECQI 337

Query: 696  CGLTLISSPHLARSYHHLFPIRLFDEVAPSLLNISHNRLPKNCFGCQQSLLNPGNQSSLS 517
            CGLTL+SSPHLARSYHHLFPI  F EV+ SL+N  H+RLPK CFGC+Q+ L PGN+SS  
Sbjct: 338  CGLTLVSSPHLARSYHHLFPITPFVEVSSSLVNNPHHRLPKTCFGCRQTFLAPGNKSSFH 397

Query: 516  VACPKCKQHFCLDCDIYIHESLHNCPGCESSR 421
            VAC KC QHFCLDCDIYIHESLHNCPGCES R
Sbjct: 398  VACSKCNQHFCLDCDIYIHESLHNCPGCESRR 429


>gb|AIU50497.1| GTF2H2, partial [Vitis vinifera]
          Length = 389

 Score =  672 bits (1734), Expect = 0.0
 Identities = 326/391 (83%), Positives = 349/391 (89%)
 Frame = -2

Query: 1593 GRGLEAWERAYADERSWESLQEDESGLLRPIDNKILYHAQYXXXXXXXXXXXXXXRIQKG 1414
            G GL+AWERAYADERSWESLQEDESGLLRPIDNK +YHAQY               IQKG
Sbjct: 6    GNGLDAWERAYADERSWESLQEDESGLLRPIDNKTIYHAQYRRRIRTTAR------IQKG 59

Query: 1413 LIRYLYIVADFSRAAAEMDFRPSRMAVVAKQIETFIREFFDQNPLSQIGLVTIKEGVAQF 1234
            LIRYLYIV D SRAA+EMDF+PSRMAVVAK IE FIREFFDQNPLSQIGLVTIK+G+AQ 
Sbjct: 60   LIRYLYIVVDLSRAASEMDFKPSRMAVVAKHIEAFIREFFDQNPLSQIGLVTIKDGLAQC 119

Query: 1233 LTDLGGSPESHIKALTGKLECSGDSSLQNALELVHDNLNQIPSYGHREVLIFYSSLSTCD 1054
            LTDLGGSP+SH+KAL GKLECSGDSSLQNAL+LVH  LNQIPSYGHREVLI YS+LSTCD
Sbjct: 120  LTDLGGSPDSHVKALMGKLECSGDSSLQNALDLVHGYLNQIPSYGHREVLILYSALSTCD 179

Query: 1053 PGDILETIQKCKKSKIRCSVIGLSAELFICKHLCQETGGSYSVALDESHLKELVLEHAPP 874
            PGDI+ETIQ+CKKSKIRCSVIGLSAE+FIC+HLCQETGGSYSVALDESH KEL+LEHAPP
Sbjct: 180  PGDIMETIQECKKSKIRCSVIGLSAEIFICRHLCQETGGSYSVALDESHFKELLLEHAPP 239

Query: 873  PPAISEFAIANLIKMGFPQRAAEGVVSICSCHKEAKVGGGYACPRCKARVCELPTECRIC 694
            PPAI+EFAIANLIKMGFPQRAAEGV+SICSCHKEAKVGGGY CPRCKARVCELPTECRIC
Sbjct: 240  PPAIAEFAIANLIKMGFPQRAAEGVISICSCHKEAKVGGGYTCPRCKARVCELPTECRIC 299

Query: 693  GLTLISSPHLARSYHHLFPIRLFDEVAPSLLNISHNRLPKNCFGCQQSLLNPGNQSSLSV 514
            GLTL+SSPHLARSYHHLFPI  FDEV+ S LN  H R  + CFGCQ+SLL PGN+ +L V
Sbjct: 300  GLTLVSSPHLARSYHHLFPIPPFDEVSLS-LNNPHQRSSRACFGCQESLLIPGNKPTLCV 358

Query: 513  ACPKCKQHFCLDCDIYIHESLHNCPGCESSR 421
            ACPKCKQHFCLDCDIYIHESLHNCPGCES R
Sbjct: 359  ACPKCKQHFCLDCDIYIHESLHNCPGCESFR 389


>ref|XP_008225258.1| PREDICTED: general transcription factor IIH subunit 2 [Prunus mume]
          Length = 420

 Score =  671 bits (1731), Expect = 0.0
 Identities = 327/424 (77%), Positives = 357/424 (84%)
 Frame = -2

Query: 1665 NNGEGRQFNRSVXXXXXXXXXXENGRGLEAWERAYADERSWESLQEDESGLLRPIDNKIL 1486
            NNGE R+ N              N  GL AWERAYADERSWESLQEDESGLL+PIDN+ L
Sbjct: 2    NNGEQRRLNGEAEEDEDEDDA--NNGGLAAWERAYADERSWESLQEDESGLLQPIDNQSL 59

Query: 1485 YHAQYXXXXXXXXXXXXXXRIQKGLIRYLYIVADFSRAAAEMDFRPSRMAVVAKQIETFI 1306
             HAQY               IQKGLIRYLY+V D S+AAAEMDFRPSRM VVAK +E FI
Sbjct: 60   KHAQYRRRLRAASTAR----IQKGLIRYLYVVIDLSKAAAEMDFRPSRMGVVAKHVEAFI 115

Query: 1305 REFFDQNPLSQIGLVTIKEGVAQFLTDLGGSPESHIKALTGKLECSGDSSLQNALELVHD 1126
            REFF QNPLSQ+GLVTIK+GVA  LTDLGGSP SH++AL GKLECSGDSSLQNAL+LVH 
Sbjct: 116  REFFYQNPLSQVGLVTIKDGVAHCLTDLGGSPNSHVQALMGKLECSGDSSLQNALDLVHG 175

Query: 1125 NLNQIPSYGHREVLIFYSSLSTCDPGDILETIQKCKKSKIRCSVIGLSAELFICKHLCQE 946
             L QIPSYGHREVLI YS+LSTCDPGDI+ETIQKCK+SKIRCSVIGLSAE+FICKHLCQE
Sbjct: 176  YLEQIPSYGHREVLILYSALSTCDPGDIMETIQKCKQSKIRCSVIGLSAEIFICKHLCQE 235

Query: 945  TGGSYSVALDESHLKELVLEHAPPPPAISEFAIANLIKMGFPQRAAEGVVSICSCHKEAK 766
            TGG Y +ALDE HL+EL+LEHAPPPPAI+EFAIANLIKMGFPQRAAEG V+ICSCHKEAK
Sbjct: 236  TGGLYYIALDEPHLRELILEHAPPPPAIAEFAIANLIKMGFPQRAAEGSVAICSCHKEAK 295

Query: 765  VGGGYACPRCKARVCELPTECRICGLTLISSPHLARSYHHLFPIRLFDEVAPSLLNISHN 586
            VGGGY CPRCKARVC+LPTECRICGLTLISSPHLARSYHHLFPI  FDEV+PSLL    N
Sbjct: 296  VGGGYTCPRCKARVCDLPTECRICGLTLISSPHLARSYHHLFPIVPFDEVSPSLLIDQQN 355

Query: 585  RLPKNCFGCQQSLLNPGNQSSLSVACPKCKQHFCLDCDIYIHESLHNCPGCESSRHPKLV 406
            + P+ CFGCQQSLLNPGN+ SL VACPKCKQHFCLDCDIYIHESLHNCPGCES+RH K+ 
Sbjct: 356  KFPRACFGCQQSLLNPGNKPSLRVACPKCKQHFCLDCDIYIHESLHNCPGCESARHSKIP 415

Query: 405  SADE 394
            +A++
Sbjct: 416  NANK 419


>ref|XP_009630848.1| PREDICTED: general transcription factor IIH subunit 2 [Nicotiana
            tomentosiformis]
          Length = 415

 Score =  670 bits (1728), Expect = 0.0
 Identities = 330/420 (78%), Positives = 355/420 (84%)
 Frame = -2

Query: 1662 NGEGRQFNRSVXXXXXXXXXXENGRGLEAWERAYADERSWESLQEDESGLLRPIDNKILY 1483
            N E ++FNR            E+GRG EAWER YADERSWESLQEDESGLLRPIDNK L 
Sbjct: 2    NNEEKRFNRE-----EEDEDEESGRGREAWERTYADERSWESLQEDESGLLRPIDNKTLS 56

Query: 1482 HAQYXXXXXXXXXXXXXXRIQKGLIRYLYIVADFSRAAAEMDFRPSRMAVVAKQIETFIR 1303
            HAQY               +QKGLIRYLYI+ DFSRAAAEMD++PSRM VVAKQ+E F+R
Sbjct: 57   HAQYRRRLRTATAAR----VQKGLIRYLYIIIDFSRAAAEMDYKPSRMVVVAKQVEAFVR 112

Query: 1302 EFFDQNPLSQIGLVTIKEGVAQFLTDLGGSPESHIKALTGKLECSGDSSLQNALELVHDN 1123
            EFFDQNPLSQIGLV +K+GVAQ LTDLGGSPE+HIKAL GKL  SGD+SLQN L+LV D 
Sbjct: 113  EFFDQNPLSQIGLVILKDGVAQCLTDLGGSPEAHIKALMGKLGTSGDASLQNGLDLVCDL 172

Query: 1122 LNQIPSYGHREVLIFYSSLSTCDPGDILETIQKCKKSKIRCSVIGLSAELFICKHLCQET 943
            LNQIPSYGHREVLI YS+LSTCDPGDILETIQKCK SKIRCSVIGLSAEL+ICKHLCQET
Sbjct: 173  LNQIPSYGHREVLILYSALSTCDPGDILETIQKCKASKIRCSVIGLSAELYICKHLCQET 232

Query: 942  GGSYSVALDESHLKELVLEHAPPPPAISEFAIANLIKMGFPQRAAEGVVSICSCHKEAKV 763
            GG Y VALDE HLKELVLEHAPPPPAI+EFA+ANLIKMGFPQRAAEGV+SICSCHKEAKV
Sbjct: 233  GGMYYVALDEPHLKELVLEHAPPPPAIAEFAVANLIKMGFPQRAAEGVISICSCHKEAKV 292

Query: 762  GGGYACPRCKARVCELPTECRICGLTLISSPHLARSYHHLFPIRLFDEVAPSLLNISHNR 583
            GGGY CPRCKARVCELPTEC ICGLTL+SSPHLARSYHHLFPIR FD+V+PSLL   H +
Sbjct: 293  GGGYTCPRCKARVCELPTECCICGLTLVSSPHLARSYHHLFPIRPFDDVSPSLLKDIH-K 351

Query: 582  LPKNCFGCQQSLLNPGNQSSLSVACPKCKQHFCLDCDIYIHESLHNCPGCESSRHPKLVS 403
            LPKNCFGCQQSLLNPGN   L VACP CK HFCLDCDIYIHESLHNCPGCES R+ K +S
Sbjct: 352  LPKNCFGCQQSLLNPGNLPGLQVACPNCKHHFCLDCDIYIHESLHNCPGCESLRNSKTIS 411


>ref|XP_007205253.1| hypothetical protein PRUPE_ppa006259mg [Prunus persica]
            gi|462400895|gb|EMJ06452.1| hypothetical protein
            PRUPE_ppa006259mg [Prunus persica]
          Length = 420

 Score =  668 bits (1723), Expect = 0.0
 Identities = 327/424 (77%), Positives = 355/424 (83%)
 Frame = -2

Query: 1665 NNGEGRQFNRSVXXXXXXXXXXENGRGLEAWERAYADERSWESLQEDESGLLRPIDNKIL 1486
            NNGE R+ N              N  GL AWERAYADERSWESLQEDESGLL+PIDN+ L
Sbjct: 2    NNGEQRRLNGEAEEDEEEDDA--NNGGLAAWERAYADERSWESLQEDESGLLQPIDNQSL 59

Query: 1485 YHAQYXXXXXXXXXXXXXXRIQKGLIRYLYIVADFSRAAAEMDFRPSRMAVVAKQIETFI 1306
             HAQY               IQKGLIRY+YIV D S+AAAEMDFRPSRM VVAK +E FI
Sbjct: 60   KHAQYRRRLRAASTAR----IQKGLIRYVYIVIDLSKAAAEMDFRPSRMGVVAKHVEAFI 115

Query: 1305 REFFDQNPLSQIGLVTIKEGVAQFLTDLGGSPESHIKALTGKLECSGDSSLQNALELVHD 1126
             EFF QNPLSQ+GLVTIK+GVA  LTDLGGSP SH+KAL GKLECSGDSSLQNAL+LVH 
Sbjct: 116  IEFFYQNPLSQVGLVTIKDGVAHCLTDLGGSPNSHVKALMGKLECSGDSSLQNALDLVHG 175

Query: 1125 NLNQIPSYGHREVLIFYSSLSTCDPGDILETIQKCKKSKIRCSVIGLSAELFICKHLCQE 946
             L QIPSYGHREVLI YS+LSTCDPGDI+ETIQKCKKSKIRCSVIGLSAE+FICKHLCQE
Sbjct: 176  YLEQIPSYGHREVLILYSALSTCDPGDIMETIQKCKKSKIRCSVIGLSAEIFICKHLCQE 235

Query: 945  TGGSYSVALDESHLKELVLEHAPPPPAISEFAIANLIKMGFPQRAAEGVVSICSCHKEAK 766
            TGG Y +ALDE HLKEL+LEHAPPPPAI+EFAIANLIKMGFPQRAAEG V+ICSCHKEAK
Sbjct: 236  TGGLYYIALDEPHLKELILEHAPPPPAIAEFAIANLIKMGFPQRAAEGSVAICSCHKEAK 295

Query: 765  VGGGYACPRCKARVCELPTECRICGLTLISSPHLARSYHHLFPIRLFDEVAPSLLNISHN 586
            VGGGY CPRCKARVC+LPTECRICGLTLISSPHLARSYHHLFPI  FDEV+PSLL    N
Sbjct: 296  VGGGYTCPRCKARVCDLPTECRICGLTLISSPHLARSYHHLFPIVPFDEVSPSLLIDQQN 355

Query: 585  RLPKNCFGCQQSLLNPGNQSSLSVACPKCKQHFCLDCDIYIHESLHNCPGCESSRHPKLV 406
            + P+ CFGCQQSLLNPGN+ SL VACPKCKQHFCLDCDIYIH+SLHNCPGCES+ H K+ 
Sbjct: 356  KFPRACFGCQQSLLNPGNKPSLRVACPKCKQHFCLDCDIYIHDSLHNCPGCESASHSKIP 415

Query: 405  SADE 394
            +A++
Sbjct: 416  NANK 419


>ref|XP_010032024.1| PREDICTED: general transcription factor IIH subunit 2 [Eucalyptus
            grandis] gi|629085051|gb|KCW51408.1| hypothetical protein
            EUGRSUZ_J00945 [Eucalyptus grandis]
          Length = 423

 Score =  667 bits (1722), Expect = 0.0
 Identities = 331/425 (77%), Positives = 356/425 (83%)
 Frame = -2

Query: 1665 NNGEGRQFNRSVXXXXXXXXXXENGRGLEAWERAYADERSWESLQEDESGLLRPIDNKIL 1486
            NNGEGR+                +  GLEAWERAYADERSWESLQEDESGLLR IDNK L
Sbjct: 2    NNGEGRRLAGQAEEEDDEDDV--DECGLEAWERAYADERSWESLQEDESGLLRSIDNKAL 59

Query: 1485 YHAQYXXXXXXXXXXXXXXRIQKGLIRYLYIVADFSRAAAEMDFRPSRMAVVAKQIETFI 1306
            YHAQY              RIQKGLIRYL IV D SRAA+E DFRPSRMAVVAK +E FI
Sbjct: 60   YHAQYRRRLRSLASSNAASRIQKGLIRYLCIVIDLSRAASETDFRPSRMAVVAKNVEAFI 119

Query: 1305 REFFDQNPLSQIGLVTIKEGVAQFLTDLGGSPESHIKALTGKLECSGDSSLQNALELVHD 1126
            REFFDQNPLSQIGLVTIK+GVA  LTDLGGSPESHIKAL GKLECSGDSSLQNAL+LV  
Sbjct: 120  REFFDQNPLSQIGLVTIKDGVANCLTDLGGSPESHIKALMGKLECSGDSSLQNALDLVCG 179

Query: 1125 NLNQIPSYGHREVLIFYSSLSTCDPGDILETIQKCKKSKIRCSVIGLSAELFICKHLCQE 946
             L QIPSYGHREVLI  S+LSTCDPGDI+ETIQKCKKSK+RCSVIGLSAE+FICKH+CQE
Sbjct: 180  YLEQIPSYGHREVLILNSALSTCDPGDIMETIQKCKKSKVRCSVIGLSAEIFICKHICQE 239

Query: 945  TGGSYSVALDESHLKELVLEHAPPPPAISEFAIANLIKMGFPQRAAEGVVSICSCHKEAK 766
            TGG YSVA+DESH KEL+LEHAPPPPAI+EFAIANLIKMGFPQRAAE V+SIC CHKEA+
Sbjct: 240  TGGLYSVAVDESHFKELILEHAPPPPAIAEFAIANLIKMGFPQRAAENVISICLCHKEAR 299

Query: 765  VGGGYACPRCKARVCELPTECRICGLTLISSPHLARSYHHLFPIRLFDEVAPSLLNISHN 586
             GGGY CPRCKARVCELPTECRICGLTL+SSPHLARSYHHLFPI  FDEV P  L+ S +
Sbjct: 300  -GGGYTCPRCKARVCELPTECRICGLTLVSSPHLARSYHHLFPIAPFDEVTPVRLSSSQH 358

Query: 585  RLPKNCFGCQQSLLNPGNQSSLSVACPKCKQHFCLDCDIYIHESLHNCPGCESSRHPKLV 406
            +LPK+CFGCQQSLLNPGN+ SLSV CP+CKQ FC+DCDIYIHESLHNCPGCES RH K V
Sbjct: 359  KLPKSCFGCQQSLLNPGNRPSLSVECPRCKQFFCIDCDIYIHESLHNCPGCESFRHFKTV 418

Query: 405  SADEE 391
            S+ EE
Sbjct: 419  SSSEE 423


>ref|XP_009777720.1| PREDICTED: general transcription factor IIH subunit 2 [Nicotiana
            sylvestris] gi|698582064|ref|XP_009777721.1| PREDICTED:
            general transcription factor IIH subunit 2 [Nicotiana
            sylvestris] gi|698582068|ref|XP_009777723.1| PREDICTED:
            general transcription factor IIH subunit 2 [Nicotiana
            sylvestris]
          Length = 413

 Score =  666 bits (1719), Expect = 0.0
 Identities = 328/412 (79%), Positives = 351/412 (85%)
 Frame = -2

Query: 1662 NGEGRQFNRSVXXXXXXXXXXENGRGLEAWERAYADERSWESLQEDESGLLRPIDNKILY 1483
            N E ++FNR            E+GRG EAWER YADERSWESLQEDESGLLRPIDNK L 
Sbjct: 2    NNEEKRFNRE-----EEDEDEESGRGREAWERTYADERSWESLQEDESGLLRPIDNKTLS 56

Query: 1482 HAQYXXXXXXXXXXXXXXRIQKGLIRYLYIVADFSRAAAEMDFRPSRMAVVAKQIETFIR 1303
            HAQY               +QKGLIRYLYI+ DFSRAAAEMD++PSRM VVAKQ+E F+R
Sbjct: 57   HAQYRRRLRTATAAR----VQKGLIRYLYIIIDFSRAAAEMDYKPSRMVVVAKQVEAFVR 112

Query: 1302 EFFDQNPLSQIGLVTIKEGVAQFLTDLGGSPESHIKALTGKLECSGDSSLQNALELVHDN 1123
            EFFDQNPLSQIGLV +K+GVAQ LTDLGGSPE+HIKAL GKL  SGD+SLQN L+LV D 
Sbjct: 113  EFFDQNPLSQIGLVILKDGVAQCLTDLGGSPEAHIKALMGKLGTSGDASLQNGLDLVCDL 172

Query: 1122 LNQIPSYGHREVLIFYSSLSTCDPGDILETIQKCKKSKIRCSVIGLSAELFICKHLCQET 943
            LNQIPSYGHREVLI YS+LSTCDPGDILETIQKCK SKIRCSVIGLSAEL+ICKHLCQET
Sbjct: 173  LNQIPSYGHREVLILYSALSTCDPGDILETIQKCKASKIRCSVIGLSAELYICKHLCQET 232

Query: 942  GGSYSVALDESHLKELVLEHAPPPPAISEFAIANLIKMGFPQRAAEGVVSICSCHKEAKV 763
            GG Y VALDE HLKELVLEHAPPPPAI+EFA+ANLIKMGFPQRAAEGV+SICSCHKEAKV
Sbjct: 233  GGMYFVALDEPHLKELVLEHAPPPPAIAEFAVANLIKMGFPQRAAEGVISICSCHKEAKV 292

Query: 762  GGGYACPRCKARVCELPTECRICGLTLISSPHLARSYHHLFPIRLFDEVAPSLLNISHNR 583
            GGGY CPRCKARVCELPTEC ICGLTL+SSPHLARSYHHLFPIR FD+V+PSLL   H +
Sbjct: 293  GGGYTCPRCKARVCELPTECCICGLTLVSSPHLARSYHHLFPIRPFDDVSPSLLKDIH-K 351

Query: 582  LPKNCFGCQQSLLNPGNQSSLSVACPKCKQHFCLDCDIYIHESLHNCPGCES 427
            LPKNCFGCQQSLLNPGN   L VACP CKQHFCLDCDIYIHESLHNCPGCES
Sbjct: 352  LPKNCFGCQQSLLNPGNLPGLQVACPNCKQHFCLDCDIYIHESLHNCPGCES 403


>gb|AIU50471.1| GTF2H2, partial [Buxus sinica]
          Length = 388

 Score =  665 bits (1716), Expect = 0.0
 Identities = 322/391 (82%), Positives = 347/391 (88%)
 Frame = -2

Query: 1593 GRGLEAWERAYADERSWESLQEDESGLLRPIDNKILYHAQYXXXXXXXXXXXXXXRIQKG 1414
            G GLEAWERAYADERSWESLQEDESGLLR IDN+ L+HAQY               IQKG
Sbjct: 6    GDGLEAWERAYADERSWESLQEDESGLLRSIDNQFLHHAQYRRRLRTAAR------IQKG 59

Query: 1413 LIRYLYIVADFSRAAAEMDFRPSRMAVVAKQIETFIREFFDQNPLSQIGLVTIKEGVAQF 1234
            LIRYLYIV D SRAAAEMDFRPSRM VVAK +E FIREFFDQNPLS IGL+TIK+GVAQ 
Sbjct: 60   LIRYLYIVVDLSRAAAEMDFRPSRMVVVAKHVEAFIREFFDQNPLSHIGLITIKDGVAQC 119

Query: 1233 LTDLGGSPESHIKALTGKLECSGDSSLQNALELVHDNLNQIPSYGHREVLIFYSSLSTCD 1054
            LTDLGGSP+SHIKAL  KLECSGDSSLQNALELVH  LNQIPSYGHREVLI YS+LSTCD
Sbjct: 120  LTDLGGSPDSHIKALMSKLECSGDSSLQNALELVHGYLNQIPSYGHREVLILYSALSTCD 179

Query: 1053 PGDILETIQKCKKSKIRCSVIGLSAELFICKHLCQETGGSYSVALDESHLKELVLEHAPP 874
            PGDI+ETIQ+CKKSKIRCSV+GLSAE++ICK+LCQETGGSYSVALDESH KEL+LEHAPP
Sbjct: 180  PGDIIETIQQCKKSKIRCSVVGLSAEIYICKYLCQETGGSYSVALDESHFKELLLEHAPP 239

Query: 873  PPAISEFAIANLIKMGFPQRAAEGVVSICSCHKEAKVGGGYACPRCKARVCELPTECRIC 694
            PPAI+EFA+ANLIKMGFPQRAAEGV+SICSCHKEAK GGGY CPRCKARVCELPTECRIC
Sbjct: 240  PPAIAEFAVANLIKMGFPQRAAEGVISICSCHKEAKAGGGYTCPRCKARVCELPTECRIC 299

Query: 693  GLTLISSPHLARSYHHLFPIRLFDEVAPSLLNISHNRLPKNCFGCQQSLLNPGNQSSLSV 514
            GLTL+SSPHLARSYHHLFPI  F+EV+P LLN  H +LP+ CFGCQQ+LL+PGN+  L V
Sbjct: 300  GLTLVSSPHLARSYHHLFPITPFEEVSP-LLNNPH-KLPRTCFGCQQTLLHPGNKPGLRV 357

Query: 513  ACPKCKQHFCLDCDIYIHESLHNCPGCESSR 421
            ACPKCKQHFCLDCDIYIHESLHNCPGCES R
Sbjct: 358  ACPKCKQHFCLDCDIYIHESLHNCPGCESLR 388


>ref|XP_004309875.1| PREDICTED: general transcription factor IIH subunit 2 [Fragaria vesca
            subsp. vesca]
          Length = 420

 Score =  665 bits (1715), Expect = 0.0
 Identities = 323/424 (76%), Positives = 357/424 (84%)
 Frame = -2

Query: 1665 NNGEGRQFNRSVXXXXXXXXXXENGRGLEAWERAYADERSWESLQEDESGLLRPIDNKIL 1486
            NNG+ R+ N  +           N  GL AWERAYADERSWESLQEDESGLLRPIDN+ L
Sbjct: 2    NNGDQRRLNGEIEEDEEDEE---NNDGLAAWERAYADERSWESLQEDESGLLRPIDNQSL 58

Query: 1485 YHAQYXXXXXXXXXXXXXXRIQKGLIRYLYIVADFSRAAAEMDFRPSRMAVVAKQIETFI 1306
            +HAQY               IQKGLIRYLYIV D S+AA+EMDFRPSRM VVAK +E FI
Sbjct: 59   HHAQYRRRLRAATTAR----IQKGLIRYLYIVIDLSKAASEMDFRPSRMGVVAKHVEAFI 114

Query: 1305 REFFDQNPLSQIGLVTIKEGVAQFLTDLGGSPESHIKALTGKLECSGDSSLQNALELVHD 1126
            RE+F QNPLSQ+GLVTIK+GV+  LTDLGGSPESH+KAL GKLECSGD+SLQNAL+LV  
Sbjct: 115  REYFYQNPLSQVGLVTIKDGVSHILTDLGGSPESHVKALMGKLECSGDASLQNALDLVQG 174

Query: 1125 NLNQIPSYGHREVLIFYSSLSTCDPGDILETIQKCKKSKIRCSVIGLSAELFICKHLCQE 946
             L+QIPSYGHREVLI YS+LSTCDPGDI+ TIQKCKKSKIRCSVIGLSAE+FICKHLCQE
Sbjct: 175  YLDQIPSYGHREVLIMYSALSTCDPGDIMGTIQKCKKSKIRCSVIGLSAEIFICKHLCQE 234

Query: 945  TGGSYSVALDESHLKELVLEHAPPPPAISEFAIANLIKMGFPQRAAEGVVSICSCHKEAK 766
            TGGSY +ALDESHLK+L+LEHAPPPPAI+EFAIANLIKMGFPQRAAE  V+ICSCHKEAK
Sbjct: 235  TGGSYYIALDESHLKDLILEHAPPPPAIAEFAIANLIKMGFPQRAAESSVAICSCHKEAK 294

Query: 765  VGGGYACPRCKARVCELPTECRICGLTLISSPHLARSYHHLFPIRLFDEVAPSLLNISHN 586
            VG GY CPRCKARVCELPTECRICGLTLISSPHLARSYHHLFPI  FDEV+ SL +   N
Sbjct: 295  VGDGYTCPRCKARVCELPTECRICGLTLISSPHLARSYHHLFPIVPFDEVSMSLYSDQQN 354

Query: 585  RLPKNCFGCQQSLLNPGNQSSLSVACPKCKQHFCLDCDIYIHESLHNCPGCESSRHPKLV 406
            +LPK CFGCQQS+L PGN+  L VACPKCKQHFCLDCDIYIHESLHNCPGC+S+RH K+ 
Sbjct: 355  KLPKACFGCQQSVLGPGNKPGLRVACPKCKQHFCLDCDIYIHESLHNCPGCDSTRHSKIP 414

Query: 405  SADE 394
            +A+E
Sbjct: 415  AANE 418


>ref|XP_009338275.1| PREDICTED: general transcription factor IIH subunit 2 isoform X1
            [Pyrus x bretschneideri]
          Length = 420

 Score =  664 bits (1714), Expect = 0.0
 Identities = 324/424 (76%), Positives = 355/424 (83%)
 Frame = -2

Query: 1665 NNGEGRQFNRSVXXXXXXXXXXENGRGLEAWERAYADERSWESLQEDESGLLRPIDNKIL 1486
            NNGE R+ N              N  GL AWERAYADERSWESLQEDESGLL+PIDN+ L
Sbjct: 2    NNGEQRRLNGEAEEDEDDDDA--NNGGLAAWERAYADERSWESLQEDESGLLQPIDNQSL 59

Query: 1485 YHAQYXXXXXXXXXXXXXXRIQKGLIRYLYIVADFSRAAAEMDFRPSRMAVVAKQIETFI 1306
             HAQY               IQKGLIRYL+IV D S+AAAEMDFRPSRM VVAK +E FI
Sbjct: 60   KHAQYRRRLRAASTAR----IQKGLIRYLFIVIDLSKAAAEMDFRPSRMGVVAKHVEAFI 115

Query: 1305 REFFDQNPLSQIGLVTIKEGVAQFLTDLGGSPESHIKALTGKLECSGDSSLQNALELVHD 1126
            REFF QNPLSQ+GLVT+K+GVA  LTDLGGSPESH+KAL GKLECSGDSSLQNAL+LVH 
Sbjct: 116  REFFYQNPLSQVGLVTVKDGVAHCLTDLGGSPESHVKALMGKLECSGDSSLQNALDLVHG 175

Query: 1125 NLNQIPSYGHREVLIFYSSLSTCDPGDILETIQKCKKSKIRCSVIGLSAELFICKHLCQE 946
             LNQIPSYGHREVLI YS+LSTCDPGDI+ETIQKCKKSKIRCSVIGLSAE+F+CKHLCQE
Sbjct: 176  YLNQIPSYGHREVLILYSALSTCDPGDIMETIQKCKKSKIRCSVIGLSAEIFVCKHLCQE 235

Query: 945  TGGSYSVALDESHLKELVLEHAPPPPAISEFAIANLIKMGFPQRAAEGVVSICSCHKEAK 766
            TGGSY +ALDE+HLKEL+LEHAPPPPAI+EFAIANLIKMGFPQRAAEG V+ICSCHKEAK
Sbjct: 236  TGGSYYIALDEAHLKELILEHAPPPPAIAEFAIANLIKMGFPQRAAEGSVAICSCHKEAK 295

Query: 765  VGGGYACPRCKARVCELPTECRICGLTLISSPHLARSYHHLFPIRLFDEVAPSLLNISHN 586
            VG GY CPRCKARVCELPTECRICGLTLISSPHLARSYHHLFPI  FDEV+ SLL    N
Sbjct: 296  VGAGYTCPRCKARVCELPTECRICGLTLISSPHLARSYHHLFPIVPFDEVSLSLLIDQQN 355

Query: 585  RLPKNCFGCQQSLLNPGNQSSLSVACPKCKQHFCLDCDIYIHESLHNCPGCESSRHPKLV 406
            + P+ CFGCQQ+LL PGN+  L VACPKCKQHFCL+CDIYIHESLHNCPGCES+R  ++ 
Sbjct: 356  KFPRACFGCQQNLLGPGNKPGLRVACPKCKQHFCLECDIYIHESLHNCPGCESTRRSRIP 415

Query: 405  SADE 394
            + +E
Sbjct: 416  NINE 419


>ref|XP_008467294.1| PREDICTED: general transcription factor IIH subunit 2 [Cucumis melo]
          Length = 423

 Score =  663 bits (1711), Expect = 0.0
 Identities = 318/426 (74%), Positives = 356/426 (83%), Gaps = 2/426 (0%)
 Frame = -2

Query: 1665 NNGEGRQFNRSVXXXXXXXXXXENGRGLEAWERAYADERSWESLQEDESGLLRPIDNKIL 1486
            NNGE R+ N              +  GL AWER YAD+RSWE+LQEDESGLL PIDNK +
Sbjct: 2    NNGENRRLNGEADEEDDDD----DANGLAAWERTYADDRSWEALQEDESGLLCPIDNKAI 57

Query: 1485 YHAQYXXXXXXXXXXXXXXRIQKGLIRYLYIVADFSRAAAEMDFRPSRMAVVAKQIETFI 1306
            YHAQY              RIQKGLIRYLYIV DFS+AA EMDFRPSRMAVVAK +E F+
Sbjct: 58   YHAQYRRRLRTLSSLATTARIQKGLIRYLYIVIDFSKAATEMDFRPSRMAVVAKHVEAFV 117

Query: 1305 REFFDQNPLSQIGLVTIKEGVAQFLTDLGGSPESHIKALTGKLECSGDSSLQNALELVHD 1126
            REFFDQNPLSQIGLVTIK+GVA  LTDLGGSPESH+KAL GKLECSGD+SLQN LELVH 
Sbjct: 118  REFFDQNPLSQIGLVTIKDGVAHCLTDLGGSPESHVKALMGKLECSGDASLQNGLELVHS 177

Query: 1125 NLNQIPSYGHREVLIFYSSLSTCDPGDILETIQKCKKSKIRCSVIGLSAELFICKHLCQE 946
             LNQIPSYGHREVL+ YS+L++CDPGDI+ET+QKCK SKIRCSVIGL+AE+FIC+HLCQE
Sbjct: 178  YLNQIPSYGHREVLVLYSALNSCDPGDIMETVQKCKTSKIRCSVIGLTAEIFICRHLCQE 237

Query: 945  TGGSYSVALDESHLKELVLEHAPPPPAISEFAIANLIKMGFPQRAAEGVVSICSCHKEAK 766
            TGGSYSVALDESH KEL+LEHAPPPPAI++ A+ NLIKMGFPQRAAE  ++ICSCHKEAK
Sbjct: 238  TGGSYSVALDESHFKELLLEHAPPPPAIADSAMPNLIKMGFPQRAAESSIAICSCHKEAK 297

Query: 765  VGGGYACPRCKARVCELPTECRICGLTLISSPHLARSYHHLFPIRLFDEVAPSLLNISHN 586
            VGGGY CPRCKARVCELPTECRICGLTLISSPHLARSYHHLFPI  FDEV+  + +   +
Sbjct: 298  VGGGYTCPRCKARVCELPTECRICGLTLISSPHLARSYHHLFPIIPFDEVSDKVFHDPRH 357

Query: 585  RLPKNCFGCQQSLLNPGNQSS--LSVACPKCKQHFCLDCDIYIHESLHNCPGCESSRHPK 412
            +LPK CFGCQ+SL+NPG ++S  + V+CPKCKQHFCLDCDIYIHESLHNCPGCES RHPK
Sbjct: 358  QLPKVCFGCQESLMNPGTRNSPGIRVSCPKCKQHFCLDCDIYIHESLHNCPGCESFRHPK 417

Query: 411  LVSADE 394
            L + DE
Sbjct: 418  LATFDE 423


>ref|XP_008358377.1| PREDICTED: LOW QUALITY PROTEIN: general transcription factor IIH
            subunit 2 [Malus domestica]
          Length = 420

 Score =  663 bits (1710), Expect = 0.0
 Identities = 324/424 (76%), Positives = 353/424 (83%)
 Frame = -2

Query: 1665 NNGEGRQFNRSVXXXXXXXXXXENGRGLEAWERAYADERSWESLQEDESGLLRPIDNKIL 1486
            NNGE R+ N              N  GL AWERAYADERSWESLQEDESGLL+PIDN+ L
Sbjct: 2    NNGEQRRLNGEAEEDEDDDDA--NNGGLAAWERAYADERSWESLQEDESGLLQPIDNQSL 59

Query: 1485 YHAQYXXXXXXXXXXXXXXRIQKGLIRYLYIVADFSRAAAEMDFRPSRMAVVAKQIETFI 1306
             HAQY               IQKGLIRYL+IV D S+AAAEMDFRPSRM VVAK +E FI
Sbjct: 60   KHAQYRRRLRAASTAR----IQKGLIRYLFIVIDLSKAAAEMDFRPSRMGVVAKHVEAFI 115

Query: 1305 REFFDQNPLSQIGLVTIKEGVAQFLTDLGGSPESHIKALTGKLECSGDSSLQNALELVHD 1126
            REFF QNPLSQ+GLVT+K+GVA  LTDLGGSPESH+KAL GKLECSGDSSLQNAL+LVH 
Sbjct: 116  REFFYQNPLSQVGLVTVKDGVAHCLTDLGGSPESHVKALMGKLECSGDSSLQNALDLVHG 175

Query: 1125 NLNQIPSYGHREVLIFYSSLSTCDPGDILETIQKCKKSKIRCSVIGLSAELFICKHLCQE 946
             LNQIPSYGHREVLI YS+LSTCDPGDI+ETIQKCKKSKIRCSVIGLSAE+FICKHLCQE
Sbjct: 176  YLNQIPSYGHREVLILYSALSTCDPGDIMETIQKCKKSKIRCSVIGLSAEIFICKHLCQE 235

Query: 945  TGGSYSVALDESHLKELVLEHAPPPPAISEFAIANLIKMGFPQRAAEGVVSICSCHKEAK 766
            TGG Y +ALDE+HLKEL+LEHAPPPPAI+EFAIANLIKMGFPQRA EG V+ICSCHKEAK
Sbjct: 236  TGGLYYIALDEAHLKELILEHAPPPPAIAEFAIANLIKMGFPQRAXEGSVAICSCHKEAK 295

Query: 765  VGGGYACPRCKARVCELPTECRICGLTLISSPHLARSYHHLFPIRLFDEVAPSLLNISHN 586
            VG GY CPRCKARVCELPTECRICGLTLISSPHLARSYHHLFPI  FDEV  SLL    N
Sbjct: 296  VGAGYTCPRCKARVCELPTECRICGLTLISSPHLARSYHHLFPIVPFDEVPLSLLIDQQN 355

Query: 585  RLPKNCFGCQQSLLNPGNQSSLSVACPKCKQHFCLDCDIYIHESLHNCPGCESSRHPKLV 406
            + P+ CFGCQQ+LL PGN+  L VACPKCKQHFCL+CDIYIHESLHNCPGCES+RH ++ 
Sbjct: 356  KFPRACFGCQQNLLGPGNKPGLRVACPKCKQHFCLECDIYIHESLHNCPGCESTRHSRIP 415

Query: 405  SADE 394
            + +E
Sbjct: 416  NINE 419


>ref|XP_004143721.1| PREDICTED: general transcription factor IIH subunit 2 [Cucumis
            sativus] gi|700195195|gb|KGN50372.1| hypothetical protein
            Csa_5G169080 [Cucumis sativus]
          Length = 423

 Score =  662 bits (1709), Expect = 0.0
 Identities = 317/426 (74%), Positives = 355/426 (83%), Gaps = 2/426 (0%)
 Frame = -2

Query: 1665 NNGEGRQFNRSVXXXXXXXXXXENGRGLEAWERAYADERSWESLQEDESGLLRPIDNKIL 1486
            NNGE R+ N              +  GL AWER YAD+RSWE+LQEDESGLLRPIDNK +
Sbjct: 2    NNGENRRLNGEADEEDDDD----DANGLAAWERTYADDRSWEALQEDESGLLRPIDNKAI 57

Query: 1485 YHAQYXXXXXXXXXXXXXXRIQKGLIRYLYIVADFSRAAAEMDFRPSRMAVVAKQIETFI 1306
            YHAQY              RIQKGLIRYLYIV DFS+AA EMDFRPSRMAVVAK ++ F+
Sbjct: 58   YHAQYRRRLRTLSSLATTARIQKGLIRYLYIVIDFSKAATEMDFRPSRMAVVAKHVDAFV 117

Query: 1305 REFFDQNPLSQIGLVTIKEGVAQFLTDLGGSPESHIKALTGKLECSGDSSLQNALELVHD 1126
            REFFDQNPLSQIGLVTIK+G A  LTDLGGSPESH+KAL GKLECSGD+SLQN LELVH 
Sbjct: 118  REFFDQNPLSQIGLVTIKDGFANCLTDLGGSPESHVKALMGKLECSGDASLQNGLELVHS 177

Query: 1125 NLNQIPSYGHREVLIFYSSLSTCDPGDILETIQKCKKSKIRCSVIGLSAELFICKHLCQE 946
             LNQIPSYGHREVL+ YS+L++CDPGDI+ET+QKCK SKIRCSVIGL+AE+FIC+HLCQE
Sbjct: 178  YLNQIPSYGHREVLVLYSALNSCDPGDIMETVQKCKTSKIRCSVIGLTAEIFICRHLCQE 237

Query: 945  TGGSYSVALDESHLKELVLEHAPPPPAISEFAIANLIKMGFPQRAAEGVVSICSCHKEAK 766
            TGGSYSVALDESH KEL+LEHAPPPPAI++ A+ NLIKMGFPQRAAE  ++ICSCHKEAK
Sbjct: 238  TGGSYSVALDESHFKELLLEHAPPPPAIADSAMPNLIKMGFPQRAAESSIAICSCHKEAK 297

Query: 765  VGGGYACPRCKARVCELPTECRICGLTLISSPHLARSYHHLFPIRLFDEVAPSLLNISHN 586
            VGGGY CPRCKARVCELPTECRICGLTLISSPHLARSYHHLFPI  FDEV+  + +   +
Sbjct: 298  VGGGYTCPRCKARVCELPTECRICGLTLISSPHLARSYHHLFPIIPFDEVSDKVFHDPRH 357

Query: 585  RLPKNCFGCQQSLLNP--GNQSSLSVACPKCKQHFCLDCDIYIHESLHNCPGCESSRHPK 412
            +LPK CFGCQ+SL+NP  GN  S+ V+CPKCKQHFCLDCDIYIHESLHNCPGCES R PK
Sbjct: 358  QLPKVCFGCQESLMNPSTGNSPSIRVSCPKCKQHFCLDCDIYIHESLHNCPGCESFRRPK 417

Query: 411  LVSADE 394
            L ++DE
Sbjct: 418  LATSDE 423


>ref|XP_007015448.1| General transcription factor II H2 isoform 1 [Theobroma cacao]
            gi|590585467|ref|XP_007015449.1| General transcription
            factor II H2 isoform 1 [Theobroma cacao]
            gi|590585471|ref|XP_007015450.1| General transcription
            factor II H2 isoform 1 [Theobroma cacao]
            gi|508785811|gb|EOY33067.1| General transcription factor
            II H2 isoform 1 [Theobroma cacao]
            gi|508785812|gb|EOY33068.1| General transcription factor
            II H2 isoform 1 [Theobroma cacao]
            gi|508785813|gb|EOY33069.1| General transcription factor
            II H2 isoform 1 [Theobroma cacao]
          Length = 420

 Score =  660 bits (1703), Expect = 0.0
 Identities = 323/425 (76%), Positives = 353/425 (83%)
 Frame = -2

Query: 1665 NNGEGRQFNRSVXXXXXXXXXXENGRGLEAWERAYADERSWESLQEDESGLLRPIDNKIL 1486
            NNG  R+ N              NG  L+AWER Y DERSWESLQEDESGLLRPIDNK L
Sbjct: 2    NNGGARRMNGG--GEEDDDEDYVNG-DLDAWERTYTDERSWESLQEDESGLLRPIDNKAL 58

Query: 1485 YHAQYXXXXXXXXXXXXXXRIQKGLIRYLYIVADFSRAAAEMDFRPSRMAVVAKQIETFI 1306
            YH+QY              RIQKGLIRYLY+V D SRAA+E DFRPSR+ V+AK +E FI
Sbjct: 59   YHSQYRRRLRSLSSTATAARIQKGLIRYLYLVIDLSRAASETDFRPSRIVVIAKHVEAFI 118

Query: 1305 REFFDQNPLSQIGLVTIKEGVAQFLTDLGGSPESHIKALTGKLECSGDSSLQNALELVHD 1126
            REFFDQNPLSQ+GL+TIK+GVAQ LTDLGGSPESHIKAL  KLECSGDSSLQNAL+LV  
Sbjct: 119  REFFDQNPLSQVGLLTIKDGVAQCLTDLGGSPESHIKALMNKLECSGDSSLQNALDLVDG 178

Query: 1125 NLNQIPSYGHREVLIFYSSLSTCDPGDILETIQKCKKSKIRCSVIGLSAELFICKHLCQE 946
             LNQIPSYGHREVLI Y++LSTCDPGDI+ETIQKCKKSKIRCSVIGL+AE+FICKHLCQE
Sbjct: 179  YLNQIPSYGHREVLILYAALSTCDPGDIMETIQKCKKSKIRCSVIGLAAEMFICKHLCQE 238

Query: 945  TGGSYSVALDESHLKELVLEHAPPPPAISEFAIANLIKMGFPQRAAEGVVSICSCHKEAK 766
            TGG+YSVALDESH KEL+LEHAPPPPAI+EFA ANLIKMGFPQRAAEG +SICSCHKEAK
Sbjct: 239  TGGTYSVALDESHFKELILEHAPPPPAIAEFATANLIKMGFPQRAAEGSISICSCHKEAK 298

Query: 765  VGGGYACPRCKARVCELPTECRICGLTLISSPHLARSYHHLFPIRLFDEVAPSLLNISHN 586
            VG GY CPRCKARVCELPTECRICGLTL+SSPHLARSYHHLFPI  FDEV P  LN  ++
Sbjct: 299  VGAGYTCPRCKARVCELPTECRICGLTLVSSPHLARSYHHLFPIAPFDEVPPFSLNDPNH 358

Query: 585  RLPKNCFGCQQSLLNPGNQSSLSVACPKCKQHFCLDCDIYIHESLHNCPGCESSRHPKLV 406
            +L +NCFGCQQSLLNPGN+  L V CPKCK +FCLDCDIYIHESLHNCPGC+S RH K  
Sbjct: 359  KLQRNCFGCQQSLLNPGNKPGLLVVCPKCKGYFCLDCDIYIHESLHNCPGCDSFRHSK-- 416

Query: 405  SADEE 391
             AD+E
Sbjct: 417  -ADKE 420


>gb|AIU50456.1| GTF2H2, partial [Magnolia denudata]
          Length = 389

 Score =  659 bits (1700), Expect = 0.0
 Identities = 317/391 (81%), Positives = 343/391 (87%)
 Frame = -2

Query: 1593 GRGLEAWERAYADERSWESLQEDESGLLRPIDNKILYHAQYXXXXXXXXXXXXXXRIQKG 1414
            G GLEAWERAYADERSWESLQEDESGLLRPIDNK LYHAQY               IQKG
Sbjct: 6    GNGLEAWERAYADERSWESLQEDESGLLRPIDNKSLYHAQYRRRLRSSSR------IQKG 59

Query: 1413 LIRYLYIVADFSRAAAEMDFRPSRMAVVAKQIETFIREFFDQNPLSQIGLVTIKEGVAQF 1234
            LIRYLY+V D SRAA+E DFRPSRM VVAK +E FIREFFDQNPLS IGLVTIK+GVA+ 
Sbjct: 60   LIRYLYVVVDLSRAASETDFRPSRMVVVAKHVEAFIREFFDQNPLSHIGLVTIKDGVARC 119

Query: 1233 LTDLGGSPESHIKALTGKLECSGDSSLQNALELVHDNLNQIPSYGHREVLIFYSSLSTCD 1054
            LTDLGGSP+SHIKAL GKLECSGDSSLQNAL+LVH  L++IPSYGHREVLI YS+LSTCD
Sbjct: 120  LTDLGGSPDSHIKALLGKLECSGDSSLQNALDLVHGYLSKIPSYGHREVLILYSALSTCD 179

Query: 1053 PGDILETIQKCKKSKIRCSVIGLSAELFICKHLCQETGGSYSVALDESHLKELVLEHAPP 874
            PGD++ETIQ CKK+KIRCSV+GLSAE++ICKHLC+ETGGSY+VALDESH KEL+LEHAPP
Sbjct: 180  PGDVMETIQNCKKAKIRCSVVGLSAEIYICKHLCEETGGSYTVALDESHFKELLLEHAPP 239

Query: 873  PPAISEFAIANLIKMGFPQRAAEGVVSICSCHKEAKVGGGYACPRCKARVCELPTECRIC 694
            PPAI+EFAIANLIKMGFPQR A+GV++ICSCHKEAKVGGGY CPRCKARVCELPTECRIC
Sbjct: 240  PPAIAEFAIANLIKMGFPQRGADGVIAICSCHKEAKVGGGYTCPRCKARVCELPTECRIC 299

Query: 693  GLTLISSPHLARSYHHLFPIRLFDEVAPSLLNISHNRLPKNCFGCQQSLLNPGNQSSLSV 514
            GLTL+SSPHLARSYHHLFPI  F EV PS  + SH RLPKNCFGCQ SL NPG+   L V
Sbjct: 300  GLTLVSSPHLARSYHHLFPISPFIEV-PSTPSNSHQRLPKNCFGCQLSLPNPGSNPVLRV 358

Query: 513  ACPKCKQHFCLDCDIYIHESLHNCPGCESSR 421
            ACPKCKQHFCLDCDIYIHESLHNCPGCES R
Sbjct: 359  ACPKCKQHFCLDCDIYIHESLHNCPGCESLR 389


>ref|XP_004237420.1| PREDICTED: general transcription factor IIH subunit 2 isoform X1
            [Solanum lycopersicum]
          Length = 414

 Score =  659 bits (1700), Expect = 0.0
 Identities = 321/402 (79%), Positives = 344/402 (85%)
 Frame = -2

Query: 1596 NGRGLEAWERAYADERSWESLQEDESGLLRPIDNKILYHAQYXXXXXXXXXXXXXXRIQK 1417
            NGRG EAWER YADERSWESLQEDESGLLRPIDNK L HAQY               IQK
Sbjct: 18   NGRGREAWERTYADERSWESLQEDESGLLRPIDNKTLSHAQYRRRLRTATAAR----IQK 73

Query: 1416 GLIRYLYIVADFSRAAAEMDFRPSRMAVVAKQIETFIREFFDQNPLSQIGLVTIKEGVAQ 1237
            GLIRYLYI+ DFSRAAAEMD++PSRM VVA+Q+E +IREFFDQNPLSQIGLV +K+GVA 
Sbjct: 74   GLIRYLYIIIDFSRAAAEMDYKPSRMVVVARQVEAYIREFFDQNPLSQIGLVILKDGVAH 133

Query: 1236 FLTDLGGSPESHIKALTGKLECSGDSSLQNALELVHDNLNQIPSYGHREVLIFYSSLSTC 1057
             LTDLGGSPE+HIKAL GKL  SGD+SLQN L+LV D LNQIPSYGHRE LI YS+LSTC
Sbjct: 134  CLTDLGGSPEAHIKALMGKLGTSGDASLQNGLDLVCDLLNQIPSYGHREALILYSALSTC 193

Query: 1056 DPGDILETIQKCKKSKIRCSVIGLSAELFICKHLCQETGGSYSVALDESHLKELVLEHAP 877
            DPGDILETIQKCK SKIRCSVIGLSAEL+ICKHLCQETGG Y VALDE HLKELVLEHAP
Sbjct: 194  DPGDILETIQKCKASKIRCSVIGLSAELYICKHLCQETGGMYFVALDEPHLKELVLEHAP 253

Query: 876  PPPAISEFAIANLIKMGFPQRAAEGVVSICSCHKEAKVGGGYACPRCKARVCELPTECRI 697
            PPPAI+EFA+ANLIKMGFPQR AEGV+SICSCHKEAKVGGGY CPRCKAR+CELPTEC I
Sbjct: 254  PPPAIAEFAVANLIKMGFPQRTAEGVISICSCHKEAKVGGGYTCPRCKARICELPTECCI 313

Query: 696  CGLTLISSPHLARSYHHLFPIRLFDEVAPSLLNISHNRLPKNCFGCQQSLLNPGNQSSLS 517
            CGLTL+SSPHLARSYHHLFPIR FD+V+PS L   H +LPKNCFGCQ SLLNPGN     
Sbjct: 314  CGLTLVSSPHLARSYHHLFPIRPFDDVSPSALKDFH-KLPKNCFGCQLSLLNPGNLPGPQ 372

Query: 516  VACPKCKQHFCLDCDIYIHESLHNCPGCESSRHPKLVSADEE 391
            VACP CKQHFCLDCDIYIHESLHNCPGCES R+ K +S  EE
Sbjct: 373  VACPNCKQHFCLDCDIYIHESLHNCPGCESLRNSKTISDMEE 414